Cp4.1LG10g03010 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g03010
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG10 : 2344436 .. 2346429 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAGGGTCTCGGCTTGAGGCATTACAAGCTCACAAGATTTCAGCGTTTTAATCGACTCTTTGATGCTTTTGAGTACGGTATGGGAGAGGAATCTCTCAGTTTTTGAGATTAGGTTTTCTTCGCTGTATTCTTCCGTCATTTCCAGAAACTCTCCGGCGCAGCGGAGAGGAGCGACATTGGAAGAGTTGAGGTCTATCTTCACGCCGTAACAAAACTTCGATGCCATTTCGAAGATCTCAGAGCCGCCGGGGAAATCAGAGAGCACTATGTGGAAGTGATCTTCCTCAACTTCGTCTTCTTCCTGTTGCTCTGCTTCGGCAGTTTCATTTTGATTTTCTCTGGTAGGAGTAGGGTAGTTGGCTTCTTCTTGCTCAGTTATCAAATTGTGAAGTTTCCGGCTCTTAGACATCAGAGGAAACTGAAAATTTACAAATCCGTAAGGCCAGAACTCAAGAGGAACTATCCGAAACAACCAAATCAACCAAGAAAGAAAAGGAAAAAACTACTACTCAAGTAAGTTCAAGATTTAGAAGGCGACCTTGTGGAGATGGAAAGCCATATCATCCACTTCGATGACAATGTCGCTCGGTAAGCCAGTAGTGCAGAACCTGCAAAAAGAAAACCCAAAAAATACCTTCCCAATCAGCACCATTGACATGGGAGCTTTAGCCGAAGGTGGGAAAATGGGGAAGGAAGACATAAGAACTCACCATGCTTGCCTCTTAGAGCTGGGGTTCTCTGCAGCAGCTTGTATTTCCGTTGCCATTTTCTGCACACTGCCCCGAAGAATCAGTCCCTGAAACTAGAAAACCAGATCCATTTCTCGCAGAAGCTGGAGAAGTCCGAAGGCACAGAAATCTGCGGGGGGTTTTAGAGGATGAAAACAAACGAAGAAACAAAGAAACAAAGAAACAAAGGGAAAGAAGTAAGATCTTTGAGGACTGTTTGTGTTTAGATGAAATGGACTTCACTCCGGAAGAACAGATAAAAAGGAAAACGACCAGTGATGGAGAGAAAATTGTTTGGTTGTGCTTTAGCTCGTTGCGATTGCCTTTGCTGAGAAGAATAAATCTGACAAATAGCATCAAAAGGCGAATGCCAAATGGGAATTTAAAGAAGAACAGAAAAGAAAAGAAAAAACCCCTCTTCTCAGATCGGACAAATGGGGGGTTTCAACAAAATTTCCATTTTTCTTCGCTGCTCTTGGTCTACGAATCAGGTCAGAATCTCACCCGCTCCATTTTAGACTTCCATCAAATAATTAATTGATTCAATTCCTTTCTTCCCCATCGTCAAAGAAAGGAAACCATAGGCTGGAATTCATGTTTTTCTGCTTCTTTCCATTCAATTAAAGAGTTTCTTGCTTTGCCACAAGCCTAATTTCTTGAGGGTCGGTTACCTTTTATTTTAAGAAATTAATGGCAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACTACTTGAAGGACTACCTTTATAAATTGTATTTTTAAAGAGAATTTTTTTTTTTCAGAACTGATGCCACCATATAAATTCATAGCTCTTTTATTTTTCACTAAAAAAAACTCTCATATTTACTTTTGTAACGAGTAAATTTAATAAAATCTCATGAAAAATATATGAATATGAAAGGGAACTGAGTTGTAAAGGTAATATTTTTTTTTTTGTAAATAGGGGGGAGGCCCATTAATGTGACATTATCACTTTCTTTAATTTCATAAGAAACAGCTAGGGAATGCCAACTTGGGCGGGTTAGTGCTTTTAGGTAAGTGATTGAATATTTTATTTTAGTATACATTTTTCCAGATTTTAATATGGGGGGCGTGGAAGGATGGCAATGGCTCTCACCTCTTGTATCTATAATTGTTTCATGCAGAAGAGCAGCTGCTGAATCACAAATCTGGGTTTTACACACAAAATTCAATGCTTCCCTTACCCACCCACCCACCGACTCTGCCCATTTCAAAAGCTGCCGCTGTACTCTGGTAA

mRNA sequence

ATGCATAGGAAACTCTCCGGCGCAGCGGAGAGGAGCGACATTGGAAGAGTTGAGGTCTATCTTCACGCCGTAACAAAACTTCGATGCCATTTCGAAGATCTCAGAGCCGCCGGGGAAATCAGAGAGCACTATGTGGAAGTGATCTTCCTCAACTTCGTCTTCTTCCTGTTGCTCTGCTTCGGCAGTTTCATTTTGATTTTCTCTGGTAGGAGTAGGACATCAGAGGAAACTGAAAATTTACAAATCCGTAAGGCCAGAACTCAAGAGGAACTATCCGAAACAACCAAATCAACCAAGAAAGAAAAGGAAAAAACTACTACTCAAAGCTGGGGTTCTCTGCAGCAGCTTGTATTTCCGTTGCCATTTTCTGCACACTGCCCCGAAGAATCAGTCCCTGAAACTAGAAAACCAGATCCATTTCTCGCAGAAGCTGGAGAAGTCCGAAGGCACAGAAATCTGCGGGGGGTTTTAGAGGATGAAAACAAACGAAGAAACAAAGAAACAAAGAAACAAAGGGAAAGAAGTAAGATCTTTGAGGACTGTTTGTGTTTAGATGAAATGGACTTCACTCCGGAAGAACAGATAAAAAGGAAAACGACCAGTGATGGAGAGAAAATTGTTTGGTTGTGCTTTAGCTCGTTGCGATTGCCTTTGCTGAGAAGAATAAATCTGACAAATAGCATCAAAAGGCGAATGCCAAATGGGAATTTAAAGAAGAACAGAAAAGAAAAGAAAAAACCCCTCTTCTCAGATCGGACAAATGGGGGGTTTCAACAAAATTTCCATTTTTCTTCGCTGCTCTTGGTCTACGAATCAGAAGAGCAGCTGCTGAATCACAAATCTGGGTTTTACACACAAAATTCAATGCTTCCCTTACCCACCCACCCACCGACTCTGCCCATTTCAAAAGCTGCCGCTGTACTCTGGTAA

Coding sequence (CDS)

ATGCATAGGAAACTCTCCGGCGCAGCGGAGAGGAGCGACATTGGAAGAGTTGAGGTCTATCTTCACGCCGTAACAAAACTTCGATGCCATTTCGAAGATCTCAGAGCCGCCGGGGAAATCAGAGAGCACTATGTGGAAGTGATCTTCCTCAACTTCGTCTTCTTCCTGTTGCTCTGCTTCGGCAGTTTCATTTTGATTTTCTCTGGTAGGAGTAGGACATCAGAGGAAACTGAAAATTTACAAATCCGTAAGGCCAGAACTCAAGAGGAACTATCCGAAACAACCAAATCAACCAAGAAAGAAAAGGAAAAAACTACTACTCAAAGCTGGGGTTCTCTGCAGCAGCTTGTATTTCCGTTGCCATTTTCTGCACACTGCCCCGAAGAATCAGTCCCTGAAACTAGAAAACCAGATCCATTTCTCGCAGAAGCTGGAGAAGTCCGAAGGCACAGAAATCTGCGGGGGGTTTTAGAGGATGAAAACAAACGAAGAAACAAAGAAACAAAGAAACAAAGGGAAAGAAGTAAGATCTTTGAGGACTGTTTGTGTTTAGATGAAATGGACTTCACTCCGGAAGAACAGATAAAAAGGAAAACGACCAGTGATGGAGAGAAAATTGTTTGGTTGTGCTTTAGCTCGTTGCGATTGCCTTTGCTGAGAAGAATAAATCTGACAAATAGCATCAAAAGGCGAATGCCAAATGGGAATTTAAAGAAGAACAGAAAAGAAAAGAAAAAACCCCTCTTCTCAGATCGGACAAATGGGGGGTTTCAACAAAATTTCCATTTTTCTTCGCTGCTCTTGGTCTACGAATCAGAAGAGCAGCTGCTGAATCACAAATCTGGGTTTTACACACAAAATTCAATGCTTCCCTTACCCACCCACCCACCGACTCTGCCCATTTCAAAAGCTGCCGCTGTACTCTGGTAA

Protein sequence

MHRKLSGAAERSDIGRVEVYLHAVTKLRCHFEDLRAAGEIREHYVEVIFLNFVFFLLLCFGSFILIFSGRSRTSEETENLQIRKARTQEELSETTKSTKKEKEKTTTQSWGSLQQLVFPLPFSAHCPEESVPETRKPDPFLAEAGEVRRHRNLRGVLEDENKRRNKETKKQRERSKIFEDCLCLDEMDFTPEEQIKRKTTSDGEKIVWLCFSSLRLPLLRRINLTNSIKRRMPNGNLKKNRKEKKKPLFSDRTNGGFQQNFHFSSLLLVYESEEQLLNHKSGFYTQNSMLPLPTHPPTLPISKAAAVLW
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g03010.1Cp4.1LG10g03010.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 70..90
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g03010CmoCh03G010230Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g03010CmoCh07G007550Cucurbita moschata (Rifu)cmocpeB806
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g03010Cucumber (Gy14) v2cgybcpeB156
Cp4.1LG10g03010Cucumber (Gy14) v2cgybcpeB160
Cp4.1LG10g03010Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g03010Melon (DHL92) v3.6.1cpemedB059
Cp4.1LG10g03010Melon (DHL92) v3.6.1cpemedB067
Cp4.1LG10g03010Melon (DHL92) v3.6.1cpemedB080
Cp4.1LG10g03010Silver-seed gourdcarcpeB0261
Cp4.1LG10g03010Silver-seed gourdcarcpeB0554
Cp4.1LG10g03010Silver-seed gourdcarcpeB1128
Cp4.1LG10g03010Cucumber (Chinese Long) v3cpecucB0067
Cp4.1LG10g03010Cucumber (Chinese Long) v3cpecucB0068
Cp4.1LG10g03010Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g03010Wax gourdcpewgoB0075
Cp4.1LG10g03010Wax gourdcpewgoB0099
Cp4.1LG10g03010Cucurbita pepo (Zucchini)cpecpeB062
Cp4.1LG10g03010Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g03010Cucurbita pepo (Zucchini)cpecpeB090
Cp4.1LG10g03010Cucurbita pepo (Zucchini)cpecpeB097
Cp4.1LG10g03010Cucurbita pepo (Zucchini)cpecpeB099
Cp4.1LG10g03010Cucumber (Gy14) v1cgycpeB0211
Cp4.1LG10g03010Cucurbita maxima (Rimu)cmacpeB027
Cp4.1LG10g03010Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g03010Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g03010Wild cucumber (PI 183967)cpecpiB057
Cp4.1LG10g03010Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g03010Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g03010Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g03010Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g03010Watermelon (Charleston Gray)cpewcgB083
Cp4.1LG10g03010Watermelon (97103) v1cpewmB073
Cp4.1LG10g03010Melon (DHL92) v3.5.1cpemeB060