Cp4.1LG10g02280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g02280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger protein, putative
LocationCp4.1LG10 : 2693506 .. 2694048 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCCATCACCTTCTTCCATGAGTTTCCCCAACAAATATGACTCAAATGGGGCGCCCATCCACTGCCACCCAGATCACAACTTGGGCCAATTGTTGAGCTTAGGCCTCTGCACACCCGAGGGGCAGCCCTCCACGGACACCAAAGCCAAGCTCGCCAACCGTGGCGAGGACAGGCTGTTCTCCTGCAACTACTGCATGAAGAAGTTCTACAGTTCACAAGCGTTGGGAGGCCATCAAAACGCCCACAAGAGAGAAAGAGGAGCCGCCAAAAGGCACCACCACTCCGATCCCAGGACCACCATCATGCTCTCTACAATGGCTGCTTCTCTCAACTACGCAGTTGCTTCCCTTGGTATCACACCCCATTCCCTTCCCCATAACCCCACACAAGGTGCTGGGATTCAAAAAACGCCATTGCCAACACCTTTGAGAAGGGAAGATCATGCCATGGAAGCTTCCGATTCCACTTGGCCTGGAAGCTTCCGATTTAAGAAACAAGGATCATCCATGAACCACCTAGACTTGAACCTTCGACTATGA

mRNA sequence

ATGCAGCCATCACCTTCTTCCATGAGTTTCCCCAACAAATATGACTCAAATGGGGCGCCCATCCACTGCCACCCAGATCACAACTTGGGCCAATTGTTGAGCTTAGGCCTCTGCACACCCGAGGGGCAGCCCTCCACGGACACCAAAGCCAAGCTCGCCAACCGTGGCGAGGACAGGCTGTTCTCCTGCAACTACTGCATGAAGAAGTTCTACAGTTCACAAGCGTTGGGAGGCCATCAAAACGCCCACAAGAGAGAAAGAGGAGCCGCCAAAAGGCACCACCACTCCGATCCCAGGACCACCATCATGCTCTCTACAATGGCTGCTTCTCTCAACTACGCAGTTGCTTCCCTTGGTATCACACCCCATTCCCTTCCCCATAACCCCACACAAGGTGCTGGGATTCAAAAAACGCCATTGCCAACACCTTTGAGAAGGGAAGATCATGCCATGGAAGCTTCCGATTCCACTTGGCCTGGAAGCTTCCGATTTAAGAAACAAGGATCATCCATGAACCACCTAGACTTGAACCTTCGACTATGA

Coding sequence (CDS)

ATGCAGCCATCACCTTCTTCCATGAGTTTCCCCAACAAATATGACTCAAATGGGGCGCCCATCCACTGCCACCCAGATCACAACTTGGGCCAATTGTTGAGCTTAGGCCTCTGCACACCCGAGGGGCAGCCCTCCACGGACACCAAAGCCAAGCTCGCCAACCGTGGCGAGGACAGGCTGTTCTCCTGCAACTACTGCATGAAGAAGTTCTACAGTTCACAAGCGTTGGGAGGCCATCAAAACGCCCACAAGAGAGAAAGAGGAGCCGCCAAAAGGCACCACCACTCCGATCCCAGGACCACCATCATGCTCTCTACAATGGCTGCTTCTCTCAACTACGCAGTTGCTTCCCTTGGTATCACACCCCATTCCCTTCCCCATAACCCCACACAAGGTGCTGGGATTCAAAAAACGCCATTGCCAACACCTTTGAGAAGGGAAGATCATGCCATGGAAGCTTCCGATTCCACTTGGCCTGGAAGCTTCCGATTTAAGAAACAAGGATCATCCATGAACCACCTAGACTTGAACCTTCGACTATGA

Protein sequence

MQPSPSSMSFPNKYDSNGAPIHCHPDHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAVASLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAMEASDSTWPGSFRFKKQGSSMNHLDLNLRL
Homology
[Close]
BLAST of Cp4.1LG10g02280 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 54/129 (41.86%), Postives = 63/129 (48.84%), Query Frame = 1 

Query: 47  DTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLST 106
           DTK+        R+FSCNYC +KFYSSQALGGHQNAHKRER  AKR  H       M   
Sbjct: 46  DTKSTKCE-ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR----MFGH 105

Query: 107 MAASLNYAVASLGITPHS-LPHNPTQGAGIQKTPLPTPLRRE-----------DHAMEAS 164
                 Y  +SLG+  HS L H+       Q  PL +    +           D+    S
Sbjct: 106 HHRPYTYTSSSLGMQAHSGLLHHTLS----QPQPLVSRFHHQGYFGNTVPLFFDYDDGGS 165

[Close]
BLAST of Cp4.1LG10g02280 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.2e-11
Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 1 

Query: 57  EDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKR------------------HHHSDP 116
           + R+FSCNYC +KFYSSQALGGHQNAHKRER  AKR                   H S  
Sbjct: 64  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVS 123

Query: 117 RTTIMLS-TMAASLNYAVASLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAMEASDST 175
           R   M S  +  S+N   ++LGI  HS  H P+   G Q T L    ++  H        
Sbjct: 124 RFASMASLPLHGSVNNR-STLGIQAHSTIHKPS-FLGRQTTSLSHVFKQSIHQKPTIGKM 183

[Close]
BLAST of Cp4.1LG10g02280 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-10
Identity = 50/133 (37.59%), Postives = 62/133 (46.62%), Query Frame = 1 

Query: 6   SSMSFPNKYDSNGAPIHCHPD-HNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCN 65
           SS +FP +   N +      D HN    L+L  C  +   +T    +     E +LFSCN
Sbjct: 8   SSTAFPYQDSLNQSIEDEERDVHNSSHELNLIDCIDD---TTSIVNESTTSTEQKLFSCN 67

Query: 66  YCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAV--------- 125
           YC + FYSSQALGGHQNAHKRER  AKR      R     S       ++          
Sbjct: 68  YCQRTFYSSQALGGHQNAHKRERTLAKR----GQRMAASASAFGHPYGFSPLPFHGQYNN 127

Query: 126 -ASLGITPHSLPH 128
             SLGI  HS+ H
Sbjct: 128 HRSLGIQAHSISH 133

[Close]
BLAST of Cp4.1LG10g02280 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 50/141 (35.46%), Postives = 62/141 (43.97%), Query Frame = 1 

Query: 59  RLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAVA-- 118
           R+FSCNYC +KFYSSQALGGHQNAHKRER  AKR          +     +S NYA A  
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMG--LAGVFPGRGSSSNYAAAAT 142

Query: 119 ---------------------SLGITPHSLPHNPTQGAGIQKTPLPT------------- 164
                                +LGI  HS  H+ +      +T +               
Sbjct: 143 AAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCI 202

[Close]
BLAST of Cp4.1LG10g02280 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 1 

Query: 11 PNKYDSNGAPIHCHPDHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKF 70
          PN       P + +   NL  +L     +     ST++ + L    + R+FSCNYC +KF
Sbjct: 5  PNTSLRLSLPSYKNHQLNLELVLEPSSMSSSSSSSTNSSSCLE---QPRVFSCNYCQRKF 64

Query: 71 YSSQALGGHQNAHKRERGAAKR 93
          YSSQALGGHQNAHK ER  AK+
Sbjct: 65 YSSQALGGHQNAHKLERTLAKK 83

[Close]
BLAST of Cp4.1LG10g02280 vs. TrEMBL
Match: A0A0A0KIE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G492290 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.5e-54
Identity = 126/189 (66.67%), Postives = 145/189 (76.72%), Query Frame = 1 

Query: 8   MSFPNKY----DSNGAPIHCHPDHNLGQLLSLGLCT-PEGQPST-----DTKAKLANR-- 67
           M+FP K     DS+G  I C+PD NLGQLLSLGL    +G P++     +TK+++ N   
Sbjct: 1   MNFPYKQAQQDDSSGTSIQCNPDDNLGQLLSLGLVRFDDGHPASNTSFSETKSRVVNGNG 60

Query: 68  GEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAV 127
           G+DRLFSCNYCM+KFYSSQALGGHQNAHKRERGAAKR   SDP+  +MLSTMA SLNYAV
Sbjct: 61  GDDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQ-SDPKM-VMLSTMAVSLNYAV 120

Query: 128 ASLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAMEASDSTWPGSFRFKK---QGSSMN 181
           ASLGI PHSLPHNPTQG  IQKTPLP  LRR+   ME  DS+WPGSFRFK+   QGS++N
Sbjct: 121 ASLGIKPHSLPHNPTQGGIIQKTPLPKVLRRDQEVME-MDSSWPGSFRFKRVENQGSAIN 180

[Close]
BLAST of Cp4.1LG10g02280 vs. TrEMBL
Match: F6HSW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00670 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.4e-22
Identity = 78/169 (46.15%), Postives = 94/169 (55.62%), Query Frame = 1 

Query: 26  DHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKR 85
           D NLG+ LSL L   E   + D   +    G +++FSCN+CM+KF+SSQALGGHQNAHKR
Sbjct: 34  DDNLGEWLSLSLSRNEAFTTGDGDPQSKPAG-NKIFSCNFCMRKFFSSQALGGHQNAHKR 93

Query: 86  ERGAAKRHHHSDPRTTIMLSTMAASLN-YAVASLGITPHSLPHNP----TQGAGIQKTPL 145
           ERGAAKR+        +M++TM   LN   + SLG  PHSL H P    T+ A     P 
Sbjct: 94  ERGAAKRYQSH----RMMMATMGFPLNSLTIRSLGAQPHSLAHKPGREGTEVAARFNDPN 153

Query: 146 P------TPLRREDHAMEASDSTWPGSFRFKK---QGSSMNHLDLNLRL 181
                  TP   E    EA DS WPGSF   K   Q S  + LDLNL L
Sbjct: 154 TGFRMAWTPFVME----EAMDSIWPGSFHVDKLPSQASDQHKLDLNLSL 193

[Close]
BLAST of Cp4.1LG10g02280 vs. TrEMBL
Match: A5BSG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001090 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.4e-22
Identity = 78/169 (46.15%), Postives = 94/169 (55.62%), Query Frame = 1 

Query: 26  DHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKR 85
           D NLG+ LSL L   E   + D   +    G +++FSCN+CM+KF+SSQALGGHQNAHKR
Sbjct: 34  DDNLGEWLSLSLSRNEAFTTGDGDPQSKPAG-NKIFSCNFCMRKFFSSQALGGHQNAHKR 93

Query: 86  ERGAAKRHHHSDPRTTIMLSTMAASLN-YAVASLGITPHSLPHNP----TQGAGIQKTPL 145
           ERGAAKR+        +M++TM   LN   + SLG  PHSL H P    T+ A     P 
Sbjct: 94  ERGAAKRYQSH----RMMMATMGFPLNSLTIRSLGAQPHSLAHKPGREGTEVAARFNDPN 153

Query: 146 P------TPLRREDHAMEASDSTWPGSFRFKK---QGSSMNHLDLNLRL 181
                  TP   E    EA DS WPGSF   K   Q S  + LDLNL L
Sbjct: 154 TGFRMAWTPFVME----EAMDSIWPGSFHVDKLPSQASDQHKLDLNLSL 193

[Close]
BLAST of Cp4.1LG10g02280 vs. TrEMBL
Match: A0A061DHC6_THECC (Zinc finger protein 7, putative OS=Theobroma cacao GN=TCM_000721 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 74/182 (40.66%), Postives = 93/182 (51.10%), Query Frame = 1 

Query: 26  DHNLGQLLSLGL----------CTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQA 85
           D NL   LSLGL          C P+ +P+++           ++FSCN+CM+KFYSSQA
Sbjct: 34  DDNLRDWLSLGLNGNESATAGECDPQSKPASN-----------KVFSCNFCMRKFYSSQA 93

Query: 86  LGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLN-YAVASLGITPHSLPHNPTQGAG 145
           LGGHQNAHKRERGAAKR         +M++TM    N  A+ S+G+ PHSL H P +   
Sbjct: 94  LGGHQNAHKRERGAAKRFQSH----KMMMTTMGFPFNSLALRSIGVQPHSLVHKPIREGS 153

Query: 146 IQKTPLPTPLRREDHAM-------------EASDSTWPGSFR---FKKQGSSMNHLDLNL 181
                     R  DH+              E+ D  WPGSFR     KQ   +  LDLNL
Sbjct: 154 AMAA------RFGDHSSPGLGMAWAPFMLEESMDLIWPGSFRLDKLPKQEPDLQKLDLNL 194

[Close]
BLAST of Cp4.1LG10g02280 vs. TrEMBL
Match: W9T325_9ROSA (Zinc finger protein 7 OS=Morus notabilis GN=L484_000039 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 81/198 (40.91%), Postives = 102/198 (51.52%), Query Frame = 1 

Query: 26  DHNLGQLLSLGLCTPEGQP-STDTKAKL-----------ANRGEDRLFSCNYCMKKFYSS 85
           D NLG  LSLGL     Q  ST T + +           ++ G +++FSCN+CM+KFYSS
Sbjct: 56  DDNLGDWLSLGLNNKMNQSFSTATDSCIDHNPQSPRPPSSSTGTNKVFSCNFCMRKFYSS 115

Query: 86  QALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAAS----LNYAVASLGITPHSLPHNP 145
           QALGGHQNAHKRERGAAKR+  S     +M++TM  S     + A  SLG+ PHSL H P
Sbjct: 116 QALGGHQNAHKRERGAAKRYQLSH---RMMMNTMGFSPSPFTSPAARSLGVRPHSLVHKP 175

Query: 146 -TQGAGI------QKTPLPTPLRREDHAME-ASDSTWPGSFRFKK--------------- 181
             +G+ +       +T    P       +E   D  WPGSFR  K               
Sbjct: 176 CREGSAVVAKFTEAETGFGMPWNSVPFLIEDTMDLVWPGSFRVGKLPKQASQDIINNNIN 235

[Close]
BLAST of Cp4.1LG10g02280 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 4.9e-14
Identity = 49/121 (40.50%), Postives = 62/121 (51.24%), Query Frame = 1 

Query: 14  YDSNGAPIHCHPDHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSS 73
           YDS+   ++   + NL   L  G+ TP    ST T        E +LFSCNYC + FYSS
Sbjct: 67  YDSSQPQLN--QELNLLDCLETGVVTPSFNGSTST--------EQKLFSCNYCQRTFYSS 126

Query: 74  QALGGHQNAHKRERGAAKRHHHSDPRTTI----MLSTMAASLNYAVASLGITPHSLPHNP 131
           QALGGHQNAHKRER  AKR                + +     Y+  +LGI  HS+ H P
Sbjct: 127 QALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHSMSHKP 177

[Close]
BLAST of Cp4.1LG10g02280 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 54/129 (41.86%), Postives = 63/129 (48.84%), Query Frame = 1 

Query: 47  DTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLST 106
           DTK+        R+FSCNYC +KFYSSQALGGHQNAHKRER  AKR  H       M   
Sbjct: 46  DTKSTKCE-ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR----MFGH 105

Query: 107 MAASLNYAVASLGITPHS-LPHNPTQGAGIQKTPLPTPLRRE-----------DHAMEAS 164
                 Y  +SLG+  HS L H+       Q  PL +    +           D+    S
Sbjct: 106 HHRPYTYTSSSLGMQAHSGLLHHTLS----QPQPLVSRFHHQGYFGNTVPLFFDYDDGGS 165

[Close]
BLAST of Cp4.1LG10g02280 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-12
Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 1 

Query: 57  EDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKR------------------HHHSDP 116
           + R+FSCNYC +KFYSSQALGGHQNAHKRER  AKR                   H S  
Sbjct: 64  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVS 123

Query: 117 RTTIMLS-TMAASLNYAVASLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAMEASDST 175
           R   M S  +  S+N   ++LGI  HS  H P+   G Q T L    ++  H        
Sbjct: 124 RFASMASLPLHGSVNNR-STLGIQAHSTIHKPS-FLGRQTTSLSHVFKQSIHQKPTIGKM 183

[Close]
BLAST of Cp4.1LG10g02280 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-11
Identity = 50/133 (37.59%), Postives = 62/133 (46.62%), Query Frame = 1 

Query: 6   SSMSFPNKYDSNGAPIHCHPD-HNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCN 65
           SS +FP +   N +      D HN    L+L  C  +   +T    +     E +LFSCN
Sbjct: 8   SSTAFPYQDSLNQSIEDEERDVHNSSHELNLIDCIDD---TTSIVNESTTSTEQKLFSCN 67

Query: 66  YCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAV--------- 125
           YC + FYSSQALGGHQNAHKRER  AKR      R     S       ++          
Sbjct: 68  YCQRTFYSSQALGGHQNAHKRERTLAKR----GQRMAASASAFGHPYGFSPLPFHGQYNN 127

Query: 126 -ASLGITPHSLPH 128
             SLGI  HS+ H
Sbjct: 128 HRSLGIQAHSISH 133

[Close]
BLAST of Cp4.1LG10g02280 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 50/141 (35.46%), Postives = 62/141 (43.97%), Query Frame = 1 

Query: 59  RLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAVA-- 118
           R+FSCNYC +KFYSSQALGGHQNAHKRER  AKR          +     +S NYA A  
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMG--LAGVFPGRGSSSNYAAAAT 142

Query: 119 ---------------------SLGITPHSLPHNPTQGAGIQKTPLPT------------- 164
                                +LGI  HS  H+ +      +T +               
Sbjct: 143 AAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCI 202

[Close]
BLAST of Cp4.1LG10g02280 vs. NCBI nr
Match: gi|449448482|ref|XP_004141995.1| (PREDICTED: zinc finger protein 4-like [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 3.5e-54
Identity = 126/189 (66.67%), Postives = 145/189 (76.72%), Query Frame = 1 

Query: 8   MSFPNKY----DSNGAPIHCHPDHNLGQLLSLGLCT-PEGQPST-----DTKAKLANR-- 67
           M+FP K     DS+G  I C+PD NLGQLLSLGL    +G P++     +TK+++ N   
Sbjct: 1   MNFPYKQAQQDDSSGTSIQCNPDDNLGQLLSLGLVRFDDGHPASNTSFSETKSRVVNGNG 60

Query: 68  GEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAV 127
           G+DRLFSCNYCM+KFYSSQALGGHQNAHKRERGAAKR   SDP+  +MLSTMA SLNYAV
Sbjct: 61  GDDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQ-SDPKM-VMLSTMAVSLNYAV 120

Query: 128 ASLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAMEASDSTWPGSFRFKK---QGSSMN 181
           ASLGI PHSLPHNPTQG  IQKTPLP  LRR+   ME  DS+WPGSFRFK+   QGS++N
Sbjct: 121 ASLGIKPHSLPHNPTQGGIIQKTPLPKVLRRDQEVME-MDSSWPGSFRFKRVENQGSAIN 180

[Close]
BLAST of Cp4.1LG10g02280 vs. NCBI nr
Match: gi|659081024|ref|XP_008441108.1| (PREDICTED: zinc finger protein 7-like [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 124/189 (65.61%), Postives = 143/189 (75.66%), Query Frame = 1 

Query: 8   MSFPNKY----DSNGAPIHCHPDHNLGQLLSLGLC-TPEGQPST-----DTKAKL--ANR 67
           MSFP K     DS+   I C+PD NLGQLLSLGL  + +G   +     +TK+++   N 
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 68  GEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYAV 127
           G+DRLFSCNYCM+KFYSSQALGGHQNAHKRERGAAKR   SDP+  +MLSTMA SLNYAV
Sbjct: 61  GDDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKR-QQSDPK-MMMLSTMAVSLNYAV 120

Query: 128 ASLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAMEASDSTWPGSFRFKK---QGSSMN 181
           ASLGI PHSLPH PTQG GIQKTPLP  LRR+   +E  DS+WPGSFRFK+   QGS++N
Sbjct: 121 ASLGIKPHSLPHTPTQG-GIQKTPLPKALRRDQEVIE-MDSSWPGSFRFKRVENQGSTVN 180

[Close]
BLAST of Cp4.1LG10g02280 vs. NCBI nr
Match: gi|1009171682|ref|XP_015866870.1| (PREDICTED: zinc finger protein 7-like [Ziziphus jujuba])

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22
Identity = 83/213 (38.97%), Postives = 106/213 (49.77%), Query Frame = 1 

Query: 5   PSSMSFPNKYDSNGAPIHCHP-----------DHNLGQLLSLGL-----------CTPEG 64
           P+ +S  N  D+  +   CH            D+NLG+ LSLG+           C P  
Sbjct: 11  PNEISDSNNQDAE-SKTSCHEENDENRVADEDDNNLGEWLSLGINENKAFSVGDNCDPHS 70

Query: 65  QPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTI 124
           +P+T  K          +FSCN+CM+KFYSSQALGGHQNAHKRERGAAKR+        +
Sbjct: 71  KPTTSNK----------VFSCNFCMRKFYSSQALGGHQNAHKRERGAAKRY---QSHRMM 130

Query: 125 MLSTMAASLNYAVA---SLGITPHSLPHNPTQGAGIQKTPLPTPLRREDHAM-------- 181
           M++TM    N A     SLG+ PHSL H  +   G  +           HAM        
Sbjct: 131 MMTTMGFPFNSATTSSRSLGVQPHSLVHKSSSREGSARVARFN--GSSAHAMAAWTPFMV 190

[Close]
BLAST of Cp4.1LG10g02280 vs. NCBI nr
Match: gi|147790933|emb|CAN77233.1| (hypothetical protein VITISV_001090 [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 78/169 (46.15%), Postives = 94/169 (55.62%), Query Frame = 1 

Query: 26  DHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKR 85
           D NLG+ LSL L   E   + D   +    G +++FSCN+CM+KF+SSQALGGHQNAHKR
Sbjct: 34  DDNLGEWLSLSLSRNEAFTTGDGDPQSKPAG-NKIFSCNFCMRKFFSSQALGGHQNAHKR 93

Query: 86  ERGAAKRHHHSDPRTTIMLSTMAASLN-YAVASLGITPHSLPHNP----TQGAGIQKTPL 145
           ERGAAKR+        +M++TM   LN   + SLG  PHSL H P    T+ A     P 
Sbjct: 94  ERGAAKRYQSH----RMMMATMGFPLNSLTIRSLGAQPHSLAHKPGREGTEVAARFNDPN 153

Query: 146 P------TPLRREDHAMEASDSTWPGSFRFKK---QGSSMNHLDLNLRL 181
                  TP   E    EA DS WPGSF   K   Q S  + LDLNL L
Sbjct: 154 TGFRMAWTPFVME----EAMDSIWPGSFHVDKLPSQASDQHKLDLNLSL 193

[Close]
BLAST of Cp4.1LG10g02280 vs. NCBI nr
Match: gi|225438896|ref|XP_002279158.1| (PREDICTED: zinc finger protein 7-like [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 78/169 (46.15%), Postives = 94/169 (55.62%), Query Frame = 1 

Query: 26  DHNLGQLLSLGLCTPEGQPSTDTKAKLANRGEDRLFSCNYCMKKFYSSQALGGHQNAHKR 85
           D NLG+ LSL L   E   + D   +    G +++FSCN+CM+KF+SSQALGGHQNAHKR
Sbjct: 34  DDNLGEWLSLSLSRNEAFTTGDGDPQSKPAG-NKIFSCNFCMRKFFSSQALGGHQNAHKR 93

Query: 86  ERGAAKRHHHSDPRTTIMLSTMAASLN-YAVASLGITPHSLPHNP----TQGAGIQKTPL 145
           ERGAAKR+        +M++TM   LN   + SLG  PHSL H P    T+ A     P 
Sbjct: 94  ERGAAKRYQSH----RMMMATMGFPLNSLTIRSLGAQPHSLAHKPGREGTEVAARFNDPN 153

Query: 146 P------TPLRREDHAMEASDSTWPGSFRFKK---QGSSMNHLDLNLRL 181
                  TP   E    EA DS WPGSF   K   Q S  + LDLNL L
Sbjct: 154 TGFRMAWTPFVME----EAMDSIWPGSFHVDKLPSQASDQHKLDLNLSL 193

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g02280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP7_ARATH2.0e-1241.86Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP1_ARATH8.2e-1137.23Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH6.9e-1037.59Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP4_ARATH2.0e-0935.46Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP2_ARATH4.5e-0943.90Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
BLAST of Cp4.1LG10g02280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIE9_CUCSA2.5e-5466.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G492290 PE=4 SV=1[more]
F6HSW5_VITVI9.4e-2246.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00670 PE=4 SV=... [more]
A5BSG0_VITVI9.4e-2246.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001090 PE=4 SV=1[more]
A0A061DHC6_THECC1.8e-2040.66Zinc finger protein 7, putative OS=Theobroma cacao GN=TCM_000721 PE=4 SV=1[more]
W9T325_9ROSA1.8e-2040.91Zinc finger protein 7 OS=Morus notabilis GN=L484_000039 PE=4 SV=1[more]
BLAST of Cp4.1LG10g02280 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10970.14.9e-1440.50 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G24625.11.1e-1341.86 zinc finger protein 7[more]
AT1G80730.14.6e-1237.23 zinc-finger protein 1[more]
AT5G25160.13.9e-1137.59 zinc finger protein 3[more]
AT1G66140.11.1e-1035.46 zinc finger protein 4[more]
BLAST of Cp4.1LG10g02280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448482|ref|XP_004141995.1|3.5e-5466.67PREDICTED: zinc finger protein 4-like [Cucumis sativus][more]
gi|659081024|ref|XP_008441108.1|3.6e-5165.61PREDICTED: zinc finger protein 7-like [Cucumis melo][more]
gi|1009171682|ref|XP_015866870.1|2.1e-2238.97PREDICTED: zinc finger protein 7-like [Ziziphus jujuba][more]
gi|147790933|emb|CAN77233.1|1.3e-2146.15hypothetical protein VITISV_001090 [Vitis vinifera][more]
gi|225438896|ref|XP_002279158.1|1.3e-2146.15PREDICTED: zinc finger protein 7-like [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g02280.1Cp4.1LG10g02280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 63..83
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 61..88
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 59..87
score: 2.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 58..87
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g02280Cucsa.102810Cucumber (Gy14) v1cgycpeB0211
Cp4.1LG10g02280CmaCh03G009470Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g02280Cla013989Watermelon (97103) v1cpewmB073
Cp4.1LG10g02280Csa6G492290Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g02280MELO3C007595Melon (DHL92) v3.5.1cpemeB060
Cp4.1LG10g02280ClCG01G017170Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g02280CSPI06G28510Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g02280Lsi01G009370Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g02280MELO3C007595.2Melon (DHL92) v3.6.1cpemedB080
Cp4.1LG10g02280CsaV3_6G043690Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g02280Bhi03G000745Wax gourdcpewgoB0084
Cp4.1LG10g02280CsGy6G027990Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g02280Carg00814Silver-seed gourdcarcpeB0554
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g02280Cucumber (Gy14) v2cgybcpeB159
Cp4.1LG10g02280Melon (DHL92) v3.6.1cpemedB064
Cp4.1LG10g02280Silver-seed gourdcarcpeB0261
Cp4.1LG10g02280Silver-seed gourdcarcpeB1128
Cp4.1LG10g02280Cucumber (Chinese Long) v3cpecucB0064
Cp4.1LG10g02280Wax gourdcpewgoB0074
Cp4.1LG10g02280Cucurbita pepo (Zucchini)cpecpeB062
Cp4.1LG10g02280Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g02280Cucurbita pepo (Zucchini)cpecpeB097
Cp4.1LG10g02280Cucurbita pepo (Zucchini)cpecpeB101
Cp4.1LG10g02280Cucumber (Gy14) v1cgycpeB1038
Cp4.1LG10g02280Cucurbita maxima (Rimu)cmacpeB168
Cp4.1LG10g02280Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g02280Cucurbita moschata (Rifu)cmocpeB144
Cp4.1LG10g02280Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g02280Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g02280Wild cucumber (PI 183967)cpecpiB055
Cp4.1LG10g02280Cucumber (Chinese Long) v2cpecuB061
Cp4.1LG10g02280Bottle gourd (USVL1VR-Ls)cpelsiB067
Cp4.1LG10g02280Watermelon (Charleston Gray)cpewcgB086
Cp4.1LG10g02280Watermelon (97103) v1cpewmB066
Cp4.1LG10g02280Melon (DHL92) v3.5.1cpemeB050