Cp4.1LG10g02110 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g02110
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	MYB transcription factor
Location	Cp4.1LG10 : 2853798 .. 2859512 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTACGCTACAAATGCTGCAAAAATTGTTGCAGTGTCGAGTGGACATTTGCAAATGGGTGCGCCAAAGCAAAAATGGACAGCTGAAGAAGAAGCTGCCCTTAAAGCAGGAGTGATCAAGCATGGAGCAGGCAAATGGCGCACAATACTCACGGATCCTGAGTTCAGCTCAATTTTGCATCAACGCTCAAATGTGGATCTCAAGGTGCCTCACCCCGCCCCCTAGTTCTTGTTCAATCACCAGAGTAATTGAGTCACAGGATGTAGAAATTCGCCAAGCATCCCATGTTGAGTTTTTCTTTCATATTCTACTTGGAAACACAGTGCTTGGTTTACTGAAACATTTAATTATTTTTCAATCTAATTTTGGCTCTGAACAGGATAAGTGGAGAAATATAAATGTTACTGCAATATGGGGGTCTAGGCAAAAAGCCAAGCTCGCACTTAAAAAGAATTCTTTGGCCCTAAAACATCATGATAATCCTATGGCTCTAAGCACCATGCTTCAGAATGAGGAGATTGTTGACGCTAAGCCACTTGCAATTTCGAATGGAACAACTCGCACTAATGCCCCAAAAGAGCCACTAGCAAGGTCTCATGGCAGCTGGTCATGTGAATCATTTTTGTTCCAGGGTGAAATAGTCAGATATTTATTGTGATTGTTGCATAACCAATTGTTATTTGGGTTCACATAGTCTAATTAAAAATATCAAATACCATAGCGCATAGCTAGCTAAATTTTCTAGTAAAGTAAATCTTGGCATTCTTGAACTCACAGTAAATTGATGATTAATGATTAAATAATTTTTAGCCAATGACATGCACCAAAGATGCTACAATGAGAAGTCATTGCCTCAAGCGTGAGCGCGCGCACACACACACACACAAGTACAACTTTTCTAATGCATTACCATGCCCCTCGGCTTTATTGCATTTAGTGCCACTCAAATTTAGTTTTTTTCCTTATCTTTTTTGGAGGCAATAATTCTTCAATTTTTTTGTTCAGCTTTCCTGTAATCAGAGGAGGGAACAAGAGATATTTTTTGGCTCTATAATCTTACATCTTGCCTCTATGGTAGTTATCTTGAGCTAAGAAATGACACGTTAATGATCTAAGTGATCTTTCACCTCCATTCAGCATGTGAAAATATAATTGTCAAATTGATTTTTATCCATCAGACATGGTTTTTAAGCAGCATGCTCTAGAATTAGTCTTTCATTGGACGCTGCAGGTGCTTCATCCTTCCTTTCCTGATTTTGAACTGATTTATACGACCTCTTTTGCATGGTGTAGATTGGACAGACTTATATCAGAGGCGATTAACAACTTAAAGGAGCCAAGAGGTTCTGACCGGGCTGCAATTGCTCTGTACATAGAGGTGCTAATGCATAACACCTTTGAATCCAAATGTTTGCAATTTTGTATGTGCAGTAAAGATCTTACCTTTCCTGCCTACCTTAGTATTCACTGCTGTGTCCTTCATTATTTCTTGTGCGCAGAATGGACAATTATCAAGACCTTAGTGTTGTAATTGCTATGACCTCCTGTTATATGTCATTTTCTTTCTGTGGAAGGGATGCCAACCAGTCAAAAGTCTACTAAAATGTGATTTATTGATCTGTTTATAGCTTTTCATGCTAGCCTCTGTGTGTGTGTCTAAAATAAGAAAGAGCTTTTCATTAAAAGAGGAGGAAAGGAACAAAAAGAGTGATAAGACATCTAACAAAAACCCAAGAGATTTCGAAAAGGTTTTCCTCGTGTTTATCTAATTCACTTCTTTCACGCAGTTTTATCATCTCTAAGATTGGGTACTTAGTTATATACTTTCAGTTCCTGGGTCTTTTTTATTCATAATTTAAATCCCTATCAAATTGTGTACTCTGGTCATTTGAAGTCACACATATGACCCTAGTTTATGCAATTCTCAGTTCCATCTTACCTTGATGCCTCTACATGATTGTTTTTTTGTTGACAAAAATGATTCTATAAAATTTGAAGTTATCATTTGTTCTTCGTGCAGGAACATTACTGGGCTCCACCAAACCTTAAAAAACTCCTTTCAACAAAATTAAAGCATATGACTGCAAATGGAAAGTTGATAAAGGTAATTCTCCTACTATAATCCAGAAATTGTATGGAACAACAATTATTCTAGCTGCTTTCAAGTCTCGAGACTGTTGAGCCATAAAGCTAATTGAATATGACTGGTAAGCCTGTGCTAATGTCTTTGCTTGGAGGAAGGTGTGAAGGAGCAGTGGCTTAGAGAATTATAGAATAGTTAGGGTAATTGGAAGGATGTTTTTTGAACTTTTATGCACGAGAGTGTGTCAGTCCACGGGGAGTGTTCGTGTGGAATGTCTAGGGGGAAAGTAAGGTTTGAAACTACAATGTAAAAAAAATAAATCAAAAGGGGAGGGGGAAAGGGGTAAGCCGGTTCTAGTTGTTAGTAGGAGGGAGCAAACCACTCAAAATCGTGTGACCCCTGCTGTTTGAGTAATCCTCTTGGCAGTCGGTTCTTGAAATTGTTTGGTTGGGGAAACAAATTCTTTGAATTGAGATTTTATCAATGGGACACAAGTCATTGCTTTAGTAGACAGGTCATGCTTGACGACGAGGTGTTATTTGAGGTGATTTGTTTGTGTTTTTTTTTAGTGGCATTTTGGTTTGTAGCCCTAGTCTGGATTCTTGTGTCCAGCACTTGGATGCATTGCCTCATGATCAAAGGCAGTATGCTGACCTCCAGAAAATGTGTGTTTGCCTAAATGGATCTGGAGTACCTCAGTCATATATTACGAAGTATGGGGTATCAGCTGATCAGCACAAAAATCAATCCTTGCGTGTCTCGTGTGTTTCAAGAATGTCGAAGGAATTAGCGTAGTTCCTTGGTTTAACTGGGTACTAAAGAAAATTTATAAAGGATGATGGACACATTTTGTGGCCACTCATGGAACTAATGAGAAGGGACCAGTTCATAGATACGCCTAAGACCAACAAGCTTGTCAGTAGCTAAAACGATCCATGGTAAATTTCTTGGTTCCTTTTTTACCGAAAATTGAGCGGTTGTTTGTTGTTGAGGATGGCCCCTACGTTGTGGGGGTTGGGTCAGTGAGGAGCAAGGGCAGCCTTGGTGTATGTAAAAGAACTAATCGCAACAGTGTTTGCCATCCCAAGAATGGAGTCCTTACATTGGCAAGTCATGAAATTGGTGTTAGGTATCTTCTTCCCTGCAATCGGAAAAACCCATCAATATATGGAAACAGGGAATACAATCCCTGTTGCGATTTCTAACCTATAATGAAGAGATTCAACACGTCCTTACAATTAAGAAAAGGAAATCAAGATAGAAATCACAAAGAAAACTCTACAGAACAAGATAACTTCCGGCACATTTGAGAGAGACCAACTTTCTCTCCTACAAGCCTCAGCTTCACTCCAAAATATCCGCATCCCTCATTCCTTTACAAACCCTAAATAAACCCCTCCAGATCCCACAACAAATTCTACGTTACACTAATCTATGGTCATGTCCTCAACTGTCGTGGGAAATGAGTATAAAAATTATACATTTAGGCTCTCATCGAAACTTCTTCTACTCAATGTTTCTTAAGGTATGTGCTCAATCAGAATCCCAAAGTTGCCAATTCCATGACTTGGGTTCATTTCTAGTCCTCTTAGGCTCTTAAGGTTCATATACCCAACGTACTCCTATTCCAAGGATGTAAGTGGCATCAAGGTGTATACGGGTTCTAGAGCACACTTAGTCTCACGTTTCCTACTTCTAAGATCCATGTGGTCATTGCGCTTCCTTTGCATAAGTAGGGGTGCCCTCGTATATATCAGACTCTGGAGAAGTCTAATAGGTATGGAGGAGTCGTCTCTCGTGATAGGTGACATCTCAATCTACCTATAATGCCAGACGTGTCTAGTATCGAAAACAGGCGAATACATCCTCACCTATGTTGTGCCCTTCTTCCTAAAGTGTGACATATGTTATATTCCGGGCCCAGCCCAATATGTGTGAAGACAATAAGAAGAGGAAGCTTTGTAGTAGGTGCTTGGTTTTCCTTTTCCTGAACTTATCCCCCTATAGACGGCGTTCTCTTGTTCAGTGATCAAATAAGAAACTTGCACCAATTTTTTGCAGCCATTTTCCCAAGGAGGATTAGATGTGTAACATGGCATATCGATGGACTCTGCCAGCTACAAGTGCTATGCCTTCATTGTTTTATGTGTCCCTACTTTGTCCAAATTGTGGCTCTACATTTAAAGTCTGGTCTCGTTTCTCTCAACTTTGTACGGGATTTGTTGTGGAACCATAACTAGTATCAAATATCTTCTAAAAGAGTTTGCTTAGTCAGATTGTGATGGAGGAGGGGTTTAATGGACCCTGATGCTAGAGTATTTCATTGAAAGCACAATTTCAGAAAACATTTCTGGAGGATGATCTATTATGCTCAAATTAGAGTATTATTTTCCTTTTCATTCTGAGAAGTTAAAAGTGTGATATATTGATAACTCAAGGCACCGTTGTAAACTATGATGCAAGTAATACTGAATTCGTAAAAAAAAAATCACAAAGAAAATGGTGGACTTGACGCTGGCAAATGAATGGTAATGCTGAAATTTGCTATTAGATCATTTATATGGATTTTGTTTGGGTAGGTAAAGCATAAGTACAGAATTGCTCCAAATTCTGCCTTATCTGGAAGAAGAAATGTTCCATTGTTACTCCTTGAGAACAAGCACTTGGATTCTTCAAAGGCCGAGAAGAGTGAAGTCAAAATCATCACTAAATCCCAGGTTGACTCGGAACTTTCAAAGATGAAGGTAATGACTGCAGAGGAGGCAGCTATAGCTGCTGCACGTGCAGTCGCTGAGGCAGAGGCTGCCATTGCAGAGGCTGAAAGGGCAGCAAGGGAAGCAGAAGAAGCAGAGGCTGAAGCTGAATCAGCACAAGTTTTTGCTGAAGCAGCAATGAAGGCGTTGGAGTGCAGAACATTCCCTAGTAGAAGTCCTGTTCAGAAAGTTCTTCTCCAAGGTAATGCAACGCACTGCTTCAGTCATAAATTACTACGTACTTAATGCTCCTGCATATCTTGTTTAATTAGGACACTGTACACTCACATATGTACCTGTGTTATAAATTTAATGAAAATCTTTTGTTATTCACCATGTTCACCATCTTGCGATGTATATCATTTAGCACTTGCTTTTATTGCATTGATGTCTGGCATTATTGGACTTGTATGTTACGAAACAACCATGAGAAGGAAAATTCAAGCCTATTGATTTTTCTGTCACTTGACCTTTTTCTTTTCGCTCCCTTTTATTTTATTTTGGCAGATAACAAAACTTTGCAATGACAACTGTAGGCAATGTATTCTGAGAAGATGAAGGTGCTGCTGGCTGCTGCATTTCCATGTGCAAGTGATTGTAACTAAACTGTAGATATTGTTAGCGTTGTAAATCTGCAGAATTATGATTGCCTTGTGAGAAAAACGGCTTCTGGGGATCGTATCATCAGAAGTGTATGTCGGTAATGTGATTTTCAAATCAAACAAAGAGTAAAGGATTTTGGAGAGAGAGAGATGCGTACTTAATCTTAAAAAGGGTGTTTTCTCGACATGTCTTGATGATTCTAAGACAAATCGAATTTGTAAATTAAGATTTTCTGTTCACCCAATACACAACTGGGAAGAAGTTTCTCAACCC

mRNA sequence

ATGGTGTACGCTACAAATGCTGCAAAAATTGTTGCAGTGTCGAGTGGACATTTGCAAATGGGTGCGCCAAAGCAAAAATGGACAGCTGAAGAAGAAGCTGCCCTTAAAGCAGGAGTGATCAAGCATGGAGCAGGCAAATGGCGCACAATACTCACGGATCCTGAGTTCAGCTCAATTTTGCATCAACGCTCAAATGTGGATCTCAAGGATAAGTGGAGAAATATAAATGTTACTGCAATATGGGGGTCTAGGCAAAAAGCCAAGCTCGCACTTAAAAAGAATTCTTTGGCCCTAAAACATCATGATAATCCTATGGCTCTAAGCACCATGCTTCAGAATGAGGAGATTGTTGACGCTAAGCCACTTGCAATTTCGAATGGAACAACTCGCACTAATGCCCCAAAAGAGCCACTAGCAAGATTGGACAGACTTATATCAGAGGCGATTAACAACTTAAAGGAGCCAAGAGGTTCTGACCGGGCTGCAATTGCTCTGTACATAGAGGAACATTACTGGGCTCCACCAAACCTTAAAAAACTCCTTTCAACAAAATTAAAGCATATGACTGCAAATGGAAAGTTGATAAAGGTAAAGCATAAGTACAGAATTGCTCCAAATTCTGCCTTATCTGGAAGAAGAAATGTTCCATTGTTACTCCTTGAGAACAAGCACTTGGATTCTTCAAAGGCCGAGAAGAGTGAAGTCAAAATCATCACTAAATCCCAGGTTGACTCGGAACTTTCAAAGATGAAGGTAATGACTGCAGAGGAGGCAGCTATAGCTGCTGCACGTGCAGTCGCTGAGGCAGAGGCTGCCATTGCAGAGGCTGAAAGGGCAGCAAGGGAAGCAGAAGAAGCAGAGGCTGAAGCTGAATCAGCACAAGTTTTTGCTGAAGCAGCAATGAAGGCGTTGGAGTGCAGAACATTCCCTAGTAGAAGTCCTGTTCAGAAAGTTCTTCTCCAAGCACTTGCTTTTATTGCATTGATGTCTGGCATTATTGGACTTGCAATGTATTCTGAGAAGATGAAGGTGCTGCTGGCTGCTGCATTTCCATGTGCAAGTGATTGTAACTAAACTGTAGATATTGTTAGCGTTGTAAATCTGCAGAATTATGATTGCCTTGTGAGAAAAACGGCTTCTGGGGATCGTATCATCAGAAGTGTATGTCGGTAATGTGATTTTCAAATCAAACAAAGAGTAAAGGATTTTGGAGAGAGAGAGATGCGTACTTAATCTTAAAAAGGGTGTTTTCTCGACATGTCTTGATGATTCTAAGACAAATCGAATTTGTAAATTAAGATTTTCTGTTCACCCAATACACAACTGGGAAGAAGTTTCTCAACCC

Coding sequence (CDS)

ATGGTGTACGCTACAAATGCTGCAAAAATTGTTGCAGTGTCGAGTGGACATTTGCAAATGGGTGCGCCAAAGCAAAAATGGACAGCTGAAGAAGAAGCTGCCCTTAAAGCAGGAGTGATCAAGCATGGAGCAGGCAAATGGCGCACAATACTCACGGATCCTGAGTTCAGCTCAATTTTGCATCAACGCTCAAATGTGGATCTCAAGGATAAGTGGAGAAATATAAATGTTACTGCAATATGGGGGTCTAGGCAAAAAGCCAAGCTCGCACTTAAAAAGAATTCTTTGGCCCTAAAACATCATGATAATCCTATGGCTCTAAGCACCATGCTTCAGAATGAGGAGATTGTTGACGCTAAGCCACTTGCAATTTCGAATGGAACAACTCGCACTAATGCCCCAAAAGAGCCACTAGCAAGATTGGACAGACTTATATCAGAGGCGATTAACAACTTAAAGGAGCCAAGAGGTTCTGACCGGGCTGCAATTGCTCTGTACATAGAGGAACATTACTGGGCTCCACCAAACCTTAAAAAACTCCTTTCAACAAAATTAAAGCATATGACTGCAAATGGAAAGTTGATAAAGGTAAAGCATAAGTACAGAATTGCTCCAAATTCTGCCTTATCTGGAAGAAGAAATGTTCCATTGTTACTCCTTGAGAACAAGCACTTGGATTCTTCAAAGGCCGAGAAGAGTGAAGTCAAAATCATCACTAAATCCCAGGTTGACTCGGAACTTTCAAAGATGAAGGTAATGACTGCAGAGGAGGCAGCTATAGCTGCTGCACGTGCAGTCGCTGAGGCAGAGGCTGCCATTGCAGAGGCTGAAAGGGCAGCAAGGGAAGCAGAAGAAGCAGAGGCTGAAGCTGAATCAGCACAAGTTTTTGCTGAAGCAGCAATGAAGGCGTTGGAGTGCAGAACATTCCCTAGTAGAAGTCCTGTTCAGAAAGTTCTTCTCCAAGCACTTGCTTTTATTGCATTGATGTCTGGCATTATTGGACTTGCAATGTATTCTGAGAAGATGAAGGTGCTGCTGGCTGCTGCATTTCCATGTGCAAGTGATTGTAACTAA

Protein sequence

MVYATNAAKIVAVSSGHLQMGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKHKYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVLLQALAFIALMSGIIGLAMYSEKMKVLLAAAFPCASDCN

Homology

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BLAST of Cp4.1LG10g02110 vs. Swiss-Prot
Match: TRB2_ARATH (Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-78
Identity = 172/293 (58.70%), Postives = 216/293 (73.72%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWT EEEAALKAGV+KHG GKWRTIL+D EFS IL  RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLA---ISNGTTRTNAPKE 139
           +WGSR+KAKLALK+     K  DN  AL+ +    +   AKP +      G+ RT A K 
Sbjct: 61  LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASKR 120

Query: 140 PLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIK 199
            +  LD++I EAI NL+E RGSDR +I LYIEE++  PPN+K+ ++ +LKH+++NG L+K
Sbjct: 121 SITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLVK 180

Query: 200 VKHKYRIAPNSALSG-RRNVPLLLLE-NKHLDSSKAEKSEVKIITKSQVDSELSKMKVMT 259
           +KHKYR + N   +G R+  P L LE N   D +K E++    +TK +VD EL  +K MT
Sbjct: 181 IKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPTKPEENGANSLTKFRVDGELYMIKGMT 240

Query: 260 AEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           A+EAA AAARAVAEAE AI EAE+AA+EAE AEAEAE+AQ+FA+AAMKAL+ R
Sbjct: 241 AQEAAEAAARAVAEAEFAITEAEQAAKEAERAEAEAEAAQIFAKAAMKALKFR 293

[Close]

BLAST of Cp4.1LG10g02110 vs. Swiss-Prot
Match: SMH6_MAIZE (Single myb histone 6 OS=Zea mays GN=SMH6 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.4e-72
Identity = 161/291 (55.33%), Postives = 205/291 (70.45%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINV-T 79
           MGAPKQ+WT+EEEAAL+AG+ +HG GKWRTIL DPEFSS L  RSNVDLKDKWRN+NV  
Sbjct: 1   MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIV 60

Query: 80  AIWGSRQKAKLALKKNSLALKHHDNPMALSTMLQN--EEIVDAKPLAISNGTTRTNAPKE 139
           +   SR KAK ALK+     K++++ MA++ +  +  +EIVD KP+       +  +  +
Sbjct: 61  STSSSRDKAKSALKRIRTIPKNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSK 120

Query: 140 PLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIK 199
              RLD +I EAI NL EP GS R  IA YIEE YW P +   LLS KLK ++ +GKLIK
Sbjct: 121 KSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSDFDHLLSAKLKDLSTSGKLIK 180

Query: 200 VKHKYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAE 259
           V  KYRIAP+S  S RR+  + LLE+   +  K    + K +T+SQVD+EL++M  MTAE
Sbjct: 181 VNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE 240

Query: 260 EAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           EA++AAARAVAEAEA +AEAE AA+EAE AEAEA++AQ FAEAA   L+ R
Sbjct: 241 EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNR 291

[Close]

BLAST of Cp4.1LG10g02110 vs. Swiss-Prot
Match: TRB1_ARATH (Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.2e-71
Identity = 166/295 (56.27%), Postives = 208/295 (70.51%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWT EEE+ALK+GVIKHG GKWRTIL DPEFS +L+ RSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 80  I-WGSRQKAKLALKKNSLALKHHDNPMALSTMLQ-NEEIVDA-KPLAISNGTTRTNAPKE 139
             WGSR+K++LA+K+     K  +N +AL+  LQ +EE VDA   L +S+       P+ 
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSNP----PPRR 120

Query: 140 PLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIK 199
           P  RLD LI EAI  LKEP G ++  I  YIE+ Y APP+ K+LLSTKLK++T+ GKL+K
Sbjct: 121 PNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVK 180

Query: 200 VKHKYRIAPNSALSGRRNVPLLLLENKH----LDSSKAEKSEVKIITKSQVDSELSKMKV 259
           VK KYRI  ++ LS  R   L +   K     L S K +  EV   T+SQ+D+E+++MK 
Sbjct: 181 VKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMKS 240

Query: 260 MTAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           M   EAA  AA+AVAEAEAA+AEAE AA+EAE AEAEAE+AQ FAE A K L+ R
Sbjct: 241 MNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEASKTLKGR 291

[Close]

BLAST of Cp4.1LG10g02110 vs. Swiss-Prot
Match: TRB3_ARATH (Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.5e-67
Identity = 154/290 (53.10%), Postives = 206/290 (71.03%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPK KWT EEE ALKAGV+KHG GKWRTIL+DP +S+IL  RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60

Query: 80  IWGSRQKAKLALKKNSLA-LKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPL 139
           +WGSR+KAKLALK+  L+  +  DN  A++ +      V  + +   +    +  P  P 
Sbjct: 61  LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPRPS 120

Query: 140 ARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVK 199
             +D++I EAI +LK P G D  +I +YIEE++   P++K+L++++LK++T  G L+K K
Sbjct: 121 TSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGTLVKKK 180

Query: 200 HKYRIAPNSALSGR-RNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEE 259
           HKYRI+ N    G  +  P LLLE    ++ K E++ VK +TKSQV  E+  M  MT +E
Sbjct: 181 HKYRISQNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVMIMG-MTEKE 240

Query: 260 AAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           AA AAARAVAEAE A+AEAE AAREA++AEAEAE+A +FA+AAMKA++ R
Sbjct: 241 AAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYR 289

[Close]

BLAST of Cp4.1LG10g02110 vs. Swiss-Prot
Match: SMH1_MAIZE (Single myb histone 1 OS=Zea mays GN=SMH1 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.3e-64
Identity = 158/298 (53.02%), Postives = 200/298 (67.11%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQ+WT EEEAALKAGV KHG GKWRTIL D +FS++L  RSNVDLKDKWRN++VTA
Sbjct: 1   MGAPKQRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSALLRLRSNVDLKDKWRNLSVTA 60

Query: 80  -IWGSRQKAKLALKKNSLAL-KHHDNPMALSTMLQ---NEEIVDAKPLAISNGTTRT-NA 139
             +GSR+KA++ALKK    + K    PM +        ++  +D +PLA++  +  T  +
Sbjct: 61  GGYGSREKARMALKKGRRVVPKLTAEPMDVDVKDMDDAHDTAIDVEPLAMAFESLPTEES 120

Query: 140 PKEPLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGK 199
           P + +ARLD LI EAI  LKEP G  +AAIA YIE+ YW P + ++LLSTKLK +  +GK
Sbjct: 121 PDKSVARLDDLILEAIRKLKEPSGPSKAAIAAYIEDQYWPPADFQRLLSTKLKALVNSGK 180

Query: 200 LIKVKHKYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVM 259
           LIKV  KYRIAP+   SGR    +        +  KAE +  K +TK QV +EL KMK M
Sbjct: 181 LIKVNQKYRIAPSPPPSGRIGTKV-----SSAEGMKAENNNAKRLTKHQVIAELEKMKGM 240

Query: 260 TAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPS 312
           T EEAA  AA+AVAEAE AIAEAE AAR AE AE +AE+A+ F +A   ++  R   S
Sbjct: 241 TKEEAAAFAAKAVAEAEVAIAEAEEAARVAEAAENDAEAAKAFLDAVTLSMRNRNAAS 293

[Close]

BLAST of Cp4.1LG10g02110 vs. TrEMBL
Match: A0A0A0KJQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495710 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 1.1e-143
Identity = 277/306 (90.52%), Postives = 291/306 (95.10%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALKKNS+A+KHHDN + +ST+L NEEIVDAKPLAISNGT+R+N PKEPLA
Sbjct: 61  IWGSRQKAKLALKKNSMAIKHHDNLVPVSTVLPNEEIVDAKPLAISNGTSRSNGPKEPLA 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RLD+LISEAINNLKEPRGSDRAAIA+YIEEHYW P NLKKLLSTKLKHMTANGKLIKVKH
Sbjct: 121 RLDKLISEAINNLKEPRGSDRAAIAMYIEEHYWPPSNLKKLLSTKLKHMTANGKLIKVKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAPNS L GRRN PLLLLE+K  DSSK EKSEVKIITKSQVDSELSKMKVMTAEEAA
Sbjct: 181 KYRIAPNSPLPGRRNTPLLLLEDKQTDSSKTEKSEVKIITKSQVDSELSKMKVMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVL 319
           IAAARAVAEAEAAIAEAERAAREAE+AEAEAE+AQVFAEAAMKALECRTFP+RSP+QKVL
Sbjct: 241 IAAARAVAEAEAAIAEAERAAREAEQAEAEAETAQVFAEAAMKALECRTFPNRSPIQKVL 300

Query: 320 LQALAF 326
           LQ   F
Sbjct: 301 LQGNVF 306

[Close]

BLAST of Cp4.1LG10g02110 vs. TrEMBL
Match: M5VZE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009220mg PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.7e-110
Identity = 226/290 (77.93%), Postives = 255/290 (87.93%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGV+KHGAGKWRTILTDPEF+SILH RSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFNSILHLRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQ-NEEIVDAKPLAISNGTTRTNAPKEPL 139
           IWGSRQKAKLALK+N    KH +NP+A+ST++Q +EEIVDAKPLAIS G  +T   K+P+
Sbjct: 61  IWGSRQKAKLALKRNLPNPKHDNNPLAVSTVIQSHEEIVDAKPLAISGGKLQTTESKQPI 120

Query: 140 ARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVK 199
           ARLD LI EAI NLKE  GSDRAAIA+YIEE YWAPPNLKKLLS+KLKHM ANGKLIKVK
Sbjct: 121 ARLDHLILEAITNLKELGGSDRAAIAMYIEEQYWAPPNLKKLLSSKLKHMVANGKLIKVK 180

Query: 200 HKYRIAPNSALS-GRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEE 259
           H+YRIAP+SA S  RR+  +LLLE K  DSS+A+KS V I+TKSQVD++LSKM+ MTA+E
Sbjct: 181 HRYRIAPSSASSEKRRSSSMLLLEGKQKDSSRADKSNVNILTKSQVDADLSKMRSMTAQE 240

Query: 260 AAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           AA AAA+AVAEAEAAIA AE AAREAE AEAEAE+AQVFA+AAMKAL+CR
Sbjct: 241 AAAAAAQAVAEAEAAIAAAEEAAREAEAAEAEAEAAQVFAKAAMKALKCR 290

[Close]

BLAST of Cp4.1LG10g02110 vs. TrEMBL
Match: A0A061DIM4_THECC (Homeodomain-like/winged-helix DNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_000807 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-104
Identity = 209/288 (72.57%), Postives = 242/288 (84.03%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGV+KHG GKWR IL+DPEFSS+L  RSNVDLKDKWRNIN TA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGTGKWRNILSDPEFSSVLRSRSNVDLKDKWRNINATA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALK+N L  KH DNP A+ T+  +EE+VDAKPLAIS+GT R   PK+P++
Sbjct: 61  IWGSRQKAKLALKRNQLTAKHDDNPAAVITVPPSEEVVDAKPLAISSGTPRATGPKKPIS 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RL+ ++ EAI +LKEP GSDRA+IA+YIEE Y APPNLKKLL+TKLK + ANG LIK+KH
Sbjct: 121 RLENILLEAITSLKEPGGSDRASIAVYIEEKYAAPPNLKKLLATKLKLLVANGTLIKIKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAP S +S  R  PLLLLE +  DSSK +K  + I+TKSQVD+ELSKM+ MTAEEAA
Sbjct: 181 KYRIAPRSTVSEARRSPLLLLEGRQKDSSKLDKKGINILTKSQVDAELSKMRSMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
            AAARAVAEAE AIAEAE AAREAE AEAEAE+A++FA+AA KAL+ R
Sbjct: 241 AAAARAVAEAEVAIAEAEEAAREAEAAEAEAEAAKIFAKAAEKALKAR 288

[Close]

BLAST of Cp4.1LG10g02110 vs. TrEMBL
Match: Q2LMD5_MALDO (MYBR6 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 3.9e-104
Identity = 217/293 (74.06%), Postives = 252/293 (86.01%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGV+KHGAGKWRTILTDPEF++ILH RSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFNTILHLRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQ-NEEIVDAKPLAISNGTTRT---NAPK 139
           IWGSRQKAKLALK+N    KH +NP+A+ST++Q +EE+VDAKPLAIS G ++T      K
Sbjct: 61  IWGSRQKAKLALKRNLPTPKHENNPLAVSTVIQSHEEVVDAKPLAISGGKSQTIESKDSK 120

Query: 140 EPLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLI 199
           +P+ARLD LI EAI NLKEP GSDRAAIA++IEE YWAPP LKKLLS+KLK+MTA GKLI
Sbjct: 121 QPIARLDHLILEAITNLKEPGGSDRAAIAMHIEEQYWAPPKLKKLLSSKLKNMTATGKLI 180

Query: 200 KVKHKYRIAPNSALS-GRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMT 259
           KVKH+YRI  +SA S  RR+   LLLE K  DS + +KS+V I+TKSQVD++L+KM+ MT
Sbjct: 181 KVKHRYRIPLSSATSEKRRSSSALLLEGKQKDSLRKDKSDVNILTKSQVDADLTKMRSMT 240

Query: 260 AEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           A+EAA AAA+AVAEAEAAIA AE AAREAE AEAEAE+AQVFA+AAMKAL+CR
Sbjct: 241 AQEAAAAAAQAVAEAEAAIAAAEEAAREAEAAEAEAEAAQVFAKAAMKALKCR 293

[Close]

BLAST of Cp4.1LG10g02110 vs. TrEMBL
Match: B9SH10_RICCO (Histone H1.1, putative OS=Ricinus communis GN=RCOM_0580970 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 8.7e-104
Identity = 222/304 (73.03%), Postives = 252/304 (82.89%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGV+KHG GKWRTIL DPEFS+IL  RSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAILRLRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQ-NEEIVDAKPLAISNGTTRTNAPKEPL 139
           IWGSRQKAKLALKK+    K  +NP ALS+++Q NEEIVDAKP+A+SNGT +    KE L
Sbjct: 61  IWGSRQKAKLALKKSPQTPKRDENPKALSSVVQGNEEIVDAKPIAVSNGTPKNVGSKELL 120

Query: 140 ARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVK 199
           ARLD LI EAI  L+EP GSDR +IALYIEE YWAPPNL KLL+ KLK +TA+GKLIKVK
Sbjct: 121 ARLDNLILEAITTLREPSGSDRPSIALYIEEKYWAPPNLMKLLAGKLKLLTASGKLIKVK 180

Query: 200 HKYRIAPNSALS-GRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEE 259
           HKYRIAP+SA+S GRR+ PL+ +E K  DS K+EKS  KI+TKSQVD ELSK+K MTAEE
Sbjct: 181 HKYRIAPSSAVSEGRRSSPLVRIEGKQKDSPKSEKSNTKILTKSQVDQELSKIKGMTAEE 240

Query: 260 AAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQK 319
           AA AAA+AVAEAEAAIAEAE AAR+A+ AEAEAE+AQVFA+AA+KA + RT   R  V  
Sbjct: 241 AAAAAAKAVAEAEAAIAEAEAAARDADAAEAEAEAAQVFAKAAIKAFKYRT---RHLVNT 300

Query: 320 VLLQ 322
           VL Q
Sbjct: 301 VLSQ 301

[Close]

BLAST of Cp4.1LG10g02110 vs. TAIR10
Match: AT5G67580.1 (AT5G67580.1 Homeodomain-like/winged-helix DNA-binding family protein)

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-79
Identity = 172/293 (58.70%), Postives = 216/293 (73.72%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWT EEEAALKAGV+KHG GKWRTIL+D EFS IL  RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLA---ISNGTTRTNAPKE 139
           +WGSR+KAKLALK+     K  DN  AL+ +    +   AKP +      G+ RT A K 
Sbjct: 61  LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASKR 120

Query: 140 PLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIK 199
            +  LD++I EAI NL+E RGSDR +I LYIEE++  PPN+K+ ++ +LKH+++NG L+K
Sbjct: 121 SITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLVK 180

Query: 200 VKHKYRIAPNSALSG-RRNVPLLLLE-NKHLDSSKAEKSEVKIITKSQVDSELSKMKVMT 259
           +KHKYR + N   +G R+  P L LE N   D +K E++    +TK +VD EL  +K MT
Sbjct: 181 IKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPTKPEENGANSLTKFRVDGELYMIKGMT 240

Query: 260 AEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           A+EAA AAARAVAEAE AI EAE+AA+EAE AEAEAE+AQ+FA+AAMKAL+ R
Sbjct: 241 AQEAAEAAARAVAEAEFAITEAEQAAKEAERAEAEAEAAQIFAKAAMKALKFR 293

[Close]

BLAST of Cp4.1LG10g02110 vs. TAIR10
Match: AT1G49950.3 (AT1G49950.3 telomere repeat binding factor 1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-72
Identity = 166/295 (56.27%), Postives = 208/295 (70.51%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWT EEE+ALK+GVIKHG GKWRTIL DPEFS +L+ RSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 80  I-WGSRQKAKLALKKNSLALKHHDNPMALSTMLQ-NEEIVDA-KPLAISNGTTRTNAPKE 139
             WGSR+K++LA+K+     K  +N +AL+  LQ +EE VDA   L +S+       P+ 
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSNP----PPRR 120

Query: 140 PLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIK 199
           P  RLD LI EAI  LKEP G ++  I  YIE+ Y APP+ K+LLSTKLK++T+ GKL+K
Sbjct: 121 PNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVK 180

Query: 200 VKHKYRIAPNSALSGRRNVPLLLLENKH----LDSSKAEKSEVKIITKSQVDSELSKMKV 259
           VK KYRI  ++ LS  R   L +   K     L S K +  EV   T+SQ+D+E+++MK 
Sbjct: 181 VKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMKS 240

Query: 260 MTAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           M   EAA  AA+AVAEAEAA+AEAE AA+EAE AEAEAE+AQ FAE A K L+ R
Sbjct: 241 MNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEASKTLKGR 291

[Close]

BLAST of Cp4.1LG10g02110 vs. TAIR10
Match: AT3G49850.1 (AT3G49850.1 telomere repeat binding factor 3)

HSP 1 Score: 256.1 bits (653), Expect = 3.1e-68
Identity = 154/290 (53.10%), Postives = 206/290 (71.03%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPK KWT EEE ALKAGV+KHG GKWRTIL+DP +S+IL  RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60

Query: 80  IWGSRQKAKLALKKNSLA-LKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPL 139
           +WGSR+KAKLALK+  L+  +  DN  A++ +      V  + +   +    +  P  P 
Sbjct: 61  LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPRPS 120

Query: 140 ARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVK 199
             +D++I EAI +LK P G D  +I +YIEE++   P++K+L++++LK++T  G L+K K
Sbjct: 121 TSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGTLVKKK 180

Query: 200 HKYRIAPNSALSGR-RNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEE 259
           HKYRI+ N    G  +  P LLLE    ++ K E++ VK +TKSQV  E+  M  MT +E
Sbjct: 181 HKYRISQNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVMIMG-MTEKE 240

Query: 260 AAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECR 308
           AA AAARAVAEAE A+AEAE AAREA++AEAEAE+A +FA+AAMKA++ R
Sbjct: 241 AAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYR 289

[Close]

BLAST of Cp4.1LG10g02110 vs. TAIR10
Match: AT1G17520.1 (AT1G17520.1 Homeodomain-like/winged-helix DNA-binding family protein)

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-26
Identity = 103/293 (35.15%), Postives = 149/293 (50.85%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVT- 79
           MG  K KWTAEEE AL AGV KHG GKW+ IL DPE +  L  RSN+DLKDKWRN++V  
Sbjct: 1   MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60

Query: 80  AIWGSRQKAKLALKKNS------------LALKHHDNPMALSTMLQNEEIVDAKPLAISN 139
            I GS+ K +    K +            +   H  +   ++T+ ++     +  L+I +
Sbjct: 61  GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRS----GSSDLSIDD 120

Query: 140 GTTRTNAPKEPLARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLK 199
                  PK    R D +I EA++NL +  GSD +AI  +IE+    PPN +++LS++L+
Sbjct: 121 SFNIVVDPKN-APRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLR 180

Query: 200 HMTANGKLIKVKHK------YRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITK 259
            + A GKL KV H       Y++  NS          L+    H+   K   ++ +  T 
Sbjct: 181 RLAAQGKLEKVSHLKSTQNFYKMNDNS----------LVQRTPHVARPKESNTKSRQQTN 240

Query: 260 SQVDSELSKMKVMTAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAESA 294
           SQ  S +S+  V    EA+I AA  + E E  +  ++ AA E E     AE A
Sbjct: 241 SQGPS-ISQQIV----EASITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEA 273

[Close]

BLAST of Cp4.1LG10g02110 vs. TAIR10
Match: AT1G72740.1 (AT1G72740.1 Homeodomain-like/winged-helix DNA-binding family protein)

HSP 1 Score: 111.7 bits (278), Expect = 9.4e-25
Identity = 104/288 (36.11%), Postives = 145/288 (50.35%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINV-T 79
           MG  K KWTAEEE AL AG+ KHG GKW+ IL DPEF+  L  RSN+DLKDKWRN++V  
Sbjct: 1   MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60

Query: 80  AIWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPL-AISNGTTRTNAPKEP 139
                  KA+ A  K     +  D P A +    N+ +   +P+  I     R   P E 
Sbjct: 61  GTQSLTNKARPAKVK-----EEGDTPAADA----NDAVTIPRPIPTIPPPPGRRTLPSEL 120

Query: 140 L--------ARLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMT 199
           +         R D +I EA++ L +  GSD ++I  +IE  +  PPN +++LST+L+ + 
Sbjct: 121 IPDENTKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLA 180

Query: 200 ANGKLIKV------KHKYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQV 259
           A  KL KV      ++ Y+I   S    +  VP            K +++  K+    Q 
Sbjct: 181 AQSKLEKVSTFKSIQNFYKIPDPSGT--KIGVP------------KPKETHTKL---RQA 240

Query: 260 DSELSKMKVMTAEEAAIAAARAVAEAEAAIAEAERAAREAEEAEAEAE 292
           +++ S       EEAAI AA  V EAE  I  A+ AA E E+    AE
Sbjct: 241 NNQTSADSQQMIEEAAITAACKVVEAENKIDVAKLAAEEFEKMTKIAE 262

[Close]

BLAST of Cp4.1LG10g02110 vs. NCBI nr
Match: gi|659079713|ref|XP_008440403.1| (PREDICTED: telomere repeat-binding factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 522.3 bits (1344), Expect = 6.6e-145
Identity = 278/306 (90.85%), Postives = 293/306 (95.75%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALKKNS+A+KHHD+P+ +ST+L NEEIVDAKPLAISNGT+R+N PKEPLA
Sbjct: 61  IWGSRQKAKLALKKNSMAIKHHDSPVPVSTVLPNEEIVDAKPLAISNGTSRSNGPKEPLA 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RLD+LISEAINNLKEPRGSDRAAIA+YIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH
Sbjct: 121 RLDKLISEAINNLKEPRGSDRAAIAMYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAPNS L GRRN PLLLLE+K  DSSK EKSEVKIITKSQVD ELSKMKVMTAEEAA
Sbjct: 181 KYRIAPNSPLPGRRNAPLLLLEDKQTDSSKTEKSEVKIITKSQVDLELSKMKVMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVL 319
           IAAARAVAEAEAAIAEAERAAREAE+AEAEAE+AQVFAEAAMKALECRTFP+RSP+QKVL
Sbjct: 241 IAAARAVAEAEAAIAEAERAAREAEQAEAEAETAQVFAEAAMKALECRTFPNRSPIQKVL 300

Query: 320 LQALAF 326
           LQ   F
Sbjct: 301 LQGNVF 306

[Close]

BLAST of Cp4.1LG10g02110 vs. NCBI nr
Match: gi|659079709|ref|XP_008440400.1| (PREDICTED: telomere repeat-binding factor 2 isoform X1 [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144
Identity = 277/302 (91.72%), Postives = 292/302 (96.69%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALKKNS+A+KHHD+P+ +ST+L NEEIVDAKPLAISNGT+R+N PKEPLA
Sbjct: 61  IWGSRQKAKLALKKNSMAIKHHDSPVPVSTVLPNEEIVDAKPLAISNGTSRSNGPKEPLA 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RLD+LISEAINNLKEPRGSDRAAIA+YIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH
Sbjct: 121 RLDKLISEAINNLKEPRGSDRAAIAMYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAPNS L GRRN PLLLLE+K  DSSK EKSEVKIITKSQVD ELSKMKVMTAEEAA
Sbjct: 181 KYRIAPNSPLPGRRNAPLLLLEDKQTDSSKTEKSEVKIITKSQVDLELSKMKVMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVL 319
           IAAARAVAEAEAAIAEAERAAREAE+AEAEAE+AQVFAEAAMKALECRTFP+RSP+QKVL
Sbjct: 241 IAAARAVAEAEAAIAEAERAAREAEQAEAEAETAQVFAEAAMKALECRTFPNRSPIQKVL 300

Query: 320 LQ 322
           LQ
Sbjct: 301 LQ 302

[Close]

BLAST of Cp4.1LG10g02110 vs. NCBI nr
Match: gi|778718710|ref|XP_011657905.1| (PREDICTED: telomere repeat-binding factor 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 517.7 bits (1332), Expect = 1.6e-143
Identity = 277/306 (90.52%), Postives = 291/306 (95.10%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALKKNS+A+KHHDN + +ST+L NEEIVDAKPLAISNGT+R+N PKEPLA
Sbjct: 61  IWGSRQKAKLALKKNSMAIKHHDNLVPVSTVLPNEEIVDAKPLAISNGTSRSNGPKEPLA 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RLD+LISEAINNLKEPRGSDRAAIA+YIEEHYW P NLKKLLSTKLKHMTANGKLIKVKH
Sbjct: 121 RLDKLISEAINNLKEPRGSDRAAIAMYIEEHYWPPSNLKKLLSTKLKHMTANGKLIKVKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAPNS L GRRN PLLLLE+K  DSSK EKSEVKIITKSQVDSELSKMKVMTAEEAA
Sbjct: 181 KYRIAPNSPLPGRRNTPLLLLEDKQTDSSKTEKSEVKIITKSQVDSELSKMKVMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVL 319
           IAAARAVAEAEAAIAEAERAAREAE+AEAEAE+AQVFAEAAMKALECRTFP+RSP+QKVL
Sbjct: 241 IAAARAVAEAEAAIAEAERAAREAEQAEAEAETAQVFAEAAMKALECRTFPNRSPIQKVL 300

Query: 320 LQALAF 326
           LQ   F
Sbjct: 301 LQGNVF 306

[Close]

BLAST of Cp4.1LG10g02110 vs. NCBI nr
Match: gi|778718704|ref|XP_011657903.1| (PREDICTED: telomere repeat-binding factor 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.8e-143
Identity = 276/302 (91.39%), Postives = 290/302 (96.03%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALKKNS+A+KHHDN + +ST+L NEEIVDAKPLAISNGT+R+N PKEPLA
Sbjct: 61  IWGSRQKAKLALKKNSMAIKHHDNLVPVSTVLPNEEIVDAKPLAISNGTSRSNGPKEPLA 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RLD+LISEAINNLKEPRGSDRAAIA+YIEEHYW P NLKKLLSTKLKHMTANGKLIKVKH
Sbjct: 121 RLDKLISEAINNLKEPRGSDRAAIAMYIEEHYWPPSNLKKLLSTKLKHMTANGKLIKVKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAPNS L GRRN PLLLLE+K  DSSK EKSEVKIITKSQVDSELSKMKVMTAEEAA
Sbjct: 181 KYRIAPNSPLPGRRNTPLLLLEDKQTDSSKTEKSEVKIITKSQVDSELSKMKVMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVL 319
           IAAARAVAEAEAAIAEAERAAREAE+AEAEAE+AQVFAEAAMKALECRTFP+RSP+QKVL
Sbjct: 241 IAAARAVAEAEAAIAEAERAAREAEQAEAEAETAQVFAEAAMKALECRTFPNRSPIQKVL 300

Query: 320 LQ 322
           LQ
Sbjct: 301 LQ 302

[Close]

BLAST of Cp4.1LG10g02110 vs. NCBI nr
Match: gi|778718721|ref|XP_011657906.1| (PREDICTED: telomere repeat-binding factor 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 5.4e-123
Identity = 250/302 (82.78%), Postives = 264/302 (87.42%), Query Frame = 1


Query: 20  MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 79
           MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILTDPEFSSILHQRSNVDLKDKWRNINVTA 60

Query: 80  IWGSRQKAKLALKKNSLALKHHDNPMALSTMLQNEEIVDAKPLAISNGTTRTNAPKEPLA 139
           IWGSRQKAKLALKKNS+A+KHHDN + +ST+L NEEIVDAKPLAISNGT+R+N PKEPLA
Sbjct: 61  IWGSRQKAKLALKKNSMAIKHHDNLVPVSTVLPNEEIVDAKPLAISNGTSRSNGPKEPLA 120

Query: 140 RLDRLISEAINNLKEPRGSDRAAIALYIEEHYWAPPNLKKLLSTKLKHMTANGKLIKVKH 199
           RLD+LISEAINNLKEPRGSDRAAIA+YIE                            VKH
Sbjct: 121 RLDKLISEAINNLKEPRGSDRAAIAMYIE----------------------------VKH 180

Query: 200 KYRIAPNSALSGRRNVPLLLLENKHLDSSKAEKSEVKIITKSQVDSELSKMKVMTAEEAA 259
           KYRIAPNS L GRRN PLLLLE+K  DSSK EKSEVKIITKSQVDSELSKMKVMTAEEAA
Sbjct: 181 KYRIAPNSPLPGRRNTPLLLLEDKQTDSSKTEKSEVKIITKSQVDSELSKMKVMTAEEAA 240

Query: 260 IAAARAVAEAEAAIAEAERAAREAEEAEAEAESAQVFAEAAMKALECRTFPSRSPVQKVL 319
           IAAARAVAEAEAAIAEAERAAREAE+AEAEAE+AQVFAEAAMKALECRTFP+RSP+QKVL
Sbjct: 241 IAAARAVAEAEAAIAEAERAAREAEQAEAEAETAQVFAEAAMKALECRTFPNRSPIQKVL 274

Query: 320 LQ 322
           LQ
Sbjct: 301 LQ 274

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g02110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRB2_ARATH	1.8e-78	58.70	Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2 PE=1 SV=1	[more]
SMH6_MAIZE	7.4e-72	55.33	Single myb histone 6 OS=Zea mays GN=SMH6 PE=2 SV=1	[more]
TRB1_ARATH	2.2e-71	56.27	Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1 PE=1 SV=1	[more]
TRB3_ARATH	5.5e-67	53.10	Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3 PE=1 SV=1	[more]
SMH1_MAIZE	3.3e-64	53.02	Single myb histone 1 OS=Zea mays GN=SMH1 PE=2 SV=1	[more]

BLAST of Cp4.1LG10g02110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJQ2_CUCSA	1.1e-143	90.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495710 PE=3 SV=1	[more]
M5VZE6_PRUPE	3.7e-110	77.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009220mg PE=3 SV=1	[more]
A0A061DIM4_THECC	1.3e-104	72.57	Homeodomain-like/winged-helix DNA-binding family protein isoform 1 OS=Theobroma ...	[more]
Q2LMD5_MALDO	3.9e-104	74.06	MYBR6 OS=Malus domestica PE=2 SV=1	[more]
B9SH10_RICCO	8.7e-104	73.03	Histone H1.1, putative OS=Ricinus communis GN=RCOM_0580970 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g02110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67580.1	1.0e-79	58.70	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT1G49950.3	1.2e-72	56.27	telomere repeat binding factor 1	[more]
AT3G49850.1	3.1e-68	53.10	telomere repeat binding factor 3	[more]
AT1G17520.1	2.2e-26	35.15	Homeodomain-like/winged-helix DNA-binding family protein	[more]
AT1G72740.1	9.4e-25	36.11	Homeodomain-like/winged-helix DNA-binding family protein	[more]

BLAST of Cp4.1LG10g02110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079713\|ref\|XP_008440403.1\|	6.6e-145	90.85	PREDICTED: telomere repeat-binding factor 2 isoform X2 [Cucumis melo]	[more]
gi\|659079709\|ref\|XP_008440400.1\|	1.1e-144	91.72	PREDICTED: telomere repeat-binding factor 2 isoform X1 [Cucumis melo]	[more]
gi\|778718710\|ref\|XP_011657905.1\|	1.6e-143	90.52	PREDICTED: telomere repeat-binding factor 2 isoform X2 [Cucumis sativus]	[more]
gi\|778718704\|ref\|XP_011657903.1\|	2.8e-143	91.39	PREDICTED: telomere repeat-binding factor 2 isoform X1 [Cucumis sativus]	[more]
gi\|778718721\|ref\|XP_011657906.1\|	5.4e-123	82.78	PREDICTED: telomere repeat-binding factor 2 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000786	nucleosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017930	Myb_dom
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR009057	Homeobox-like_sf
IPR005818	Histone_H1/H5_H15
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g02110.1	Cp4.1LG10g02110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 24..74 score: 2.
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 23..78 score: 6.
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 143..198 score: 1.7
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 133..200 score: 3.4
IPR005818	Linker histone H1/H5, domain H15	PROFILE	PS51504	H15	coord: 137..205 score: 24
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 21..75 score: 4.0
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 21..84 score: 5.08
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 137..207 score: 1.9
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 135..213 score: 2.01
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 19..80 score: 11
None	No IPR available	unknown	Coil	Coil	coord: 259..296 scor
None	No IPR available	PANTHER	PTHR21717	TELOMERIC REPEAT BINDING PROTEIN	coord: 20..192 score: 6.7E
None	No IPR available	PANTHER	PTHR21717:SF27	TELOMERE REPEAT-BINDING FACTOR 2-RELATED	coord: 20..192 score: 6.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g02110	Cucsa.103240	Cucumber (Gy14) v1	cgycpeB0211
Cp4.1LG10g02110	CmaCh03G009110	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g02110	CmaCh07G006470	Cucurbita maxima (Rimu)	cmacpeB866
Cp4.1LG10g02110	CmoCh07G006540	Cucurbita moschata (Rifu)	cmocpeB806
Cp4.1LG10g02110	CmoCh03G009510	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g02110	Cla014034	Watermelon (97103) v1	cpewmB073
Cp4.1LG10g02110	Csa6G495710	Cucumber (Chinese Long) v2	cpecuB085
Cp4.1LG10g02110	MELO3C007640	Melon (DHL92) v3.5.1	cpemeB060
Cp4.1LG10g02110	ClCG01G017630	Watermelon (Charleston Gray)	cpewcgB061
Cp4.1LG10g02110	CSPI06G28960	Wild cucumber (PI 183967)	cpecpiB080
Cp4.1LG10g02110	Lsi01G008880	Bottle gourd (USVL1VR-Ls)	cpelsiB054
Cp4.1LG10g02110	MELO3C007640.2	Melon (DHL92) v3.6.1	cpemedB080
Cp4.1LG10g02110	CsaV3_6G044170	Cucumber (Chinese Long) v3	cpecucB0092
Cp4.1LG10g02110	Bhi03G000798	Wax gourd	cpewgoB0084
Cp4.1LG10g02110	CsGy6G028440	Cucumber (Gy14) v2	cgybcpeB710
Cp4.1LG10g02110	Carg00787	Silver-seed gourd	carcpeB0554
Cp4.1LG10g02110	Carg18545	Silver-seed gourd	carcpeB0001

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g02110	Cp4.1LG19g10570	Cucurbita pepo (Zucchini)	cpecpeB076

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g02110	Cucumber (Chinese Long) v3	cpecucB0064
Cp4.1LG10g02110	Wax gourd	cpewgoB0074
Cp4.1LG10g02110	Cucurbita pepo (Zucchini)	cpecpeB101
Cp4.1LG10g02110	Cucumber (Gy14) v1	cgycpeB1038
Cp4.1LG10g02110	Cucurbita maxima (Rimu)	cmacpeB168
Cp4.1LG10g02110	Cucurbita moschata (Rifu)	cmocpeB144
Cp4.1LG10g02110	Wild cucumber (PI 183967)	cpecpiB055
Cp4.1LG10g02110	Cucumber (Chinese Long) v2	cpecuB061
Cp4.1LG10g02110	Bottle gourd (USVL1VR-Ls)	cpelsiB067
Cp4.1LG10g02110	Watermelon (Charleston Gray)	cpewcgB086
Cp4.1LG10g02110	Watermelon (97103) v1	cpewmB066
Cp4.1LG10g02110	Melon (DHL92) v3.5.1	cpemeB050
Cp4.1LG10g02110	Cucumber (Gy14) v2	cgybcpeB159
Cp4.1LG10g02110	Melon (DHL92) v3.6.1	cpemedB064