Cp4.1LG10g00940 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGGGAAGATTTCCACCTATTCTTCCACTTATCTTCAGAAGCAAATATGATAAATGCAATCCGATTCGGCCGCAGTCCACCGCCGATCGTGCTCACATTACCTCTTCCGCCACAGCTCCGCCGTATAGACGCGCCTGAGCTCCGATCCCGTCAACGGATCGGTTTCTCCACCGCACCTGATCAGAACCCACAGAACATGGATGACTCTAAGAACACCGCCAAGCAGACTGGGTTAGATCTTTCTCGTTTCTAGTTGCATGGGTCAGTTTATGGGGCCGTTTTAAAAGGTTAATTTTGTAAAATGTGTGTAAAATCAGAGATATAATGACTGATTCGTTCGGGCTAGCGTACGCGTGCCGAAGCGAGTATGAAGGATTTGGAGGGATTTATAGATGGATTAAGTCAACCGAGGAGGGGGCTGAGAATGAAAAGAAACGTGGTAATTAAATTCTTATGCATTTTCGCTAATTAAATGATGATATGATGATTTAGTGTTTTAATTACTGTTTTGTTTGAATTATGCTTTGAAGAATATGATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGGCTCGACATCAAACTCACTCCAACTGCTAAGAACAATGATCTCGTCTCATACTCGTTTGTATTATGTCATGTTTTTCTTTGTCATCTTGTTGTCATGAGAAGTTAGTTTGTATAAAATCTAAATTTGCATTTTGTAAATTAATTAGAAGAATATTGGGTGTGATAATAAGGAGTTAGACCACCACACGGGGCGCCGCCACCGGAATGTTACCGTCGTCGTCGCCACCACCTATCCCTACCTATCCCTAGAAGAAGTTGCACAAGTCACTTGCTAGGGGAGGTGCAGGTTGGGTCAGAGTCGACCATCTTTGTTGTACCAATTCAAAAGTTGAAGTTTTGTCCAACCCAAAACTAATATATTCGGGTTCTAATGCTAATTTAACTCAACTCAATCTTTATAATTCGGGTTGGGTT TTGGGGAAGATTTCCACCTATTCTTCCACTTATCTTCAGAAGCAAATATGATAAATGCAATCCGATTCGGCCGCAGTCCACCGCCGATCGTGCTCACATTACCTCTTCCGCCACAGCTCCGCCGTATAGACGCGCCTGAGCTCCGATCCCGTCAACGGATCGGTTTCTCCACCGCACCTGATCAGAACCCACAGAACATGGATGACTCTAAGAACACCGCCAAGCAGACTGGAGATATAATGACTGATTCGTTCGGGCTAGCGTACGCGTGCCGAAGCGAGTATGAAGGATTTGGAGGGATTTATAGATGGATTAAGTCAACCGAGGAGGGGGCTGAGAATGAAAAGAAACGTGAATATGATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGGCTCGACATCAAACTCACTCCAACTGCTAAGAACAATGATCTCGTCTCATACTCGTTTGTATTATGTCATGTTTTTCTTTGTCATCTTGTTGTCATGAGAAGTTAGTTTGTATAAAATCTAAATTTGCATTTTGTAAATTAATTAGAAGAATATTGGGTGTGATAATAAGGAGTTAGACCACCACACGGGGCGCCGCCACCGGAATGTTACCGTCGTCGTCGCCACCACCTATCCCTACCTATCCCTAGAAGAAGTTGCACAAGTCACTTGCTAGGGGAGGTGCAGGTTGGGTCAGAGTCGACCATCTTTGTTGTACCAATTCAAAAGTTGAAGTTTTGTCCAACCCAAAACTAATATATTCGGGTTCTAATGCTAATTTAACTCAACTCAATCTTTATAATTCGGGTTGGGTT ATGATAAATGCAATCCGATTCGGCCGCAGTCCACCGCCGATCGTGCTCACATTACCTCTTCCGCCACAGCTCCGCCGTATAGACGCGCCTGAGCTCCGATCCCGTCAACGGATCGGTTTCTCCACCGCACCTGATCAGAACCCACAGAACATGGATGACTCTAAGAACACCGCCAAGCAGACTGGAGATATAATGACTGATTCGTTCGGGCTAGCGTACGCGTGCCGAAGCGAGTATGAAGGATTTGGAGGGATTTATAGATGGATTAAGTCAACCGAGGAGGGGGCTGAGAATGAAAAGAAACGTGAATATGATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGGCTCGACATCAAACTCACTCCAACTGCTAA MINAIRFGRSPPPIVLTLPLPPQLRRIDAPELRSRQRIGFSTAPDQNPQNMDDSKNTAKQTGDIMTDSFGLAYACRSEYEGFGGIYRWIKSTEEGAENEKKREYDKSQGSEVKEKEKARHQTHSNC
BLAST of Cp4.1LG10g00940 vs. TrEMBL
Match: A0A0A0KGG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502630 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.2e-34 Identity = 86/132 (65.15%), Postives = 100/132 (75.76%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. TrEMBL
Match: K4B6G5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.1e-14 Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. TrEMBL
Match: V4SJ98_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026748mg PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12 Identity = 62/135 (45.93%), Postives = 77/135 (57.04%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. TrEMBL
Match: A0A067GIH8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046060mg PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12 Identity = 62/135 (45.93%), Postives = 77/135 (57.04%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. TrEMBL
Match: A0A061DFT5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000398 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.0e-11 Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. TAIR10
Match: AT5G66780.1 (AT5G66780.1 unknown protein) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14 Identity = 54/128 (42.19%), Postives = 74/128 (57.81%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. NCBI nr
Match: gi|778722467|ref|XP_011658492.1| (PREDICTED: uncharacterized protein LOC101219972 [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 1.7e-34 Identity = 86/132 (65.15%), Postives = 100/132 (75.76%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. NCBI nr
Match: gi|659081048|ref|XP_008441122.1| (PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]) HSP 1 Score: 149.4 bits (376), Expect = 4.1e-33 Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. NCBI nr
Match: gi|723677680|ref|XP_010317214.1| (PREDICTED: uncharacterized protein LOC104645973 [Solanum lycopersicum]) HSP 1 Score: 85.5 bits (210), Expect = 7.3e-14 Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. NCBI nr
Match: gi|697121456|ref|XP_009614702.1| (PREDICTED: uncharacterized protein LOC104107570 [Nicotiana tomentosiformis]) HSP 1 Score: 82.8 bits (203), Expect = 4.7e-13 Identity = 61/127 (48.03%), Postives = 74/127 (58.27%), Query Frame = 1
BLAST of Cp4.1LG10g00940 vs. NCBI nr
Match: gi|567866125|ref|XP_006425685.1| (hypothetical protein CICLE_v10026748mg [Citrus clementina]) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12 Identity = 62/135 (45.93%), Postives = 77/135 (57.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |