Cp4.1LG10g00080 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g00080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLa-related 1B
LocationCp4.1LG10 : 3929222 .. 3935077 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTAAGACTAAGGATTAAAGAGACAATTCACAAACCTAATATTGATCGATCAAATTGGGCCGAGGGAAGTCGAATGGAGGCCAAATAGGCGCACGATAGCGCAAGGGCAAAATAGCAAATGAGGGTATTATCGTAATTGTATGCACATAAACCAGCCAGGGCAAGGTATCCCGAAGAGTTTCTAGTGGGAAGCAACCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTGGTTCTGAGCCCGCTCCCCTGCTCTCCGGCATGGCCTTCGTTCTCGTCTCTCTCTTTCTCTTTCTGTGATCTGATTGCTGAAACTTTTGGAAACTCTTCACATTTAGGATTCCCTTCGTTTTGTCTGCCGATTGCTGTTTTTTAACTGGAGGGAAATTTCTTGATTGCTTTAGTACATTTACTCCTTCTGTTCGTCGATCAACGGACTTCGGGCTGAGAAAACCCCAACTCGCGCTGTTTTTCTTCTTGTTTGCCGTTCATTCTTATGGCTGCTCCTAATTTACCCGATGACAACCCTGTAACGGCAACCGGAGCCCACCATTCTCGTAACTCCGGCCAAAATATAAGCAGCCCTAAACCTCGCCGCGCCACTCGCCCAGTGTCGTCGCCGTGGACTCAGATTGTGCGTGGTGAGTTGGAAATCCCAGCCGTTGTTTCGGCTTCTCCATCGAATATGACATCTACGACGGCTATTGTCGAACCGTGTTCTCCTTCGCCTTCTTCTTTAGTTGCGGAAGAATCTGTTGGAGAGATATCAGAGAGTGGGAATGAGTCACAATCCAATGCGGGAAATAAGCCCGCCTGGAATAAGCTGTCTAATGGGGCCGCGAAGGTAGGGCCTGTTATGGGTGCTGTATCTTGGCCAGCCTTATCGGAGTCTACTCGGTTCTCAATCAAATCGTCTTCGGAATCACCGAAAGGCTCAGCTGATGGATCTGTTGGCCCTGCATGCCAGGTTCTGACCCTTCATTTTGTAGCGTAGTTTTTAGTCAGTCTTGTTAACTAATGATGCGTGCTTAAAGTTTAAATATTCAGTTGCTCAGACTATTTTTTTTTAACTGCAGCAGTCTTTCCATCTACGCGATCATTTACAATGTTTTATTTATTTATTTATTTTTATTTGGAATCCAGAATATGTTCTGTTTTGAATGATCCACTTCAGTATCTCGGCCATCCTATTTGTTGTTTTCGTTATGGATCAAAGACAGTAGAAAGGCTCGGATATGTTTACTTGGGGAAGAAGTTAGAGTTAGGGTAAAAGGGTCTTAGAAGTAAGCTTATGGTATTCTTTGCTTGTTGATTGAAGGTAGTAGCAATTAGAAATATTTGACATTATCGATTAAGCTAGACGATGTTAACTCTGCCACCTTTTTTTATTCTTTGTAATGCATTCTTCATTTGGTCAATTCACTATGTTTCGAACAAAGACATGCATGGTTATCTGCTATTCTTTTTTAGTGTTTTTTTAAGAACATTTTACAAACGGGGAATAAGTTTATTGATAATTGATTGTTGTCTCAGTAATTTTTGCTCATACATGTCATTAATAACATCAAACTTTCATATATCTCTCTGCATTTTGTAACCAGGGGATAGGTAATCCATCATCCTCACCACATAAAGAATTTAGTACTGCAAGCCCTATTCTGAATCCGACTCCGAATCCAAACCCAACTCATCGTCAGAAGCCAATGAAGCGTAGTGGTGTTGGCAATTCATACAGTGGTGGTGCCTCTCAACAGTCGACAATTTCAGGTTCTATAATTGATACTACTCCAAATAATCCATCGTCGAAGGACCACATTCAAAGGAGTTCATTTGCCTCACAATCACACAATGATCATAATTATCAACATCAACGTAACTTTAGGAGTCGTGGGTCTGGTTACTCACGTGGTGACAGTTTTCACCAGCACAGTCATGGTTCTAGGCGTGATCAAGATCGTGGAAACCATGATTGGAATCCCCATCGAAATTATGGACAGTCTCAGAGAGTTATTCAAAGATATATAAGGCCTCCACCACCTCCTAGTACTGCAACGTTTATTCCTTCATCTATGAGGCCTATTGGCGGTCCCATGCCTTTTCATGGTAAATTCTACCCTATTTTTATGAGGCTTATGGTTTTTATCATGTGAACTTGTTCAAGCTTGAATCTATTTGCAGAATTTGGACCTCCAGTGGTATATGTCGCAGCTTCTCCTCAAGAGGCCCTTAGAGGTGTACCTTTTGTGGCTCCAATGCCACCTAATGCCGTGTTTTACCCTACTTCAGATCCTCAGTTATATGCTAAGATAGTCCATCAAATAGAATACTACTTCAGGTGTTTTTCTTGTCATATATGTTTAATAGATTACTAAATTTATATTTTTCTTATCATCCTTGTCTTGTATTGGCATTTTGAAATAATTTTAACAGCATCACCTTAAATTTGTTAATTGCAGTGGTAAGAACTTAATAAAGGATACTTTCTTGAGAGGGAACATGGATGAAGATGGATGGGTTCCAATTCATTTAGTAGCAGGCTTTAAAATGGTGGGTAAATTAAGGGAGCTGAGAGCTGAGTTTTCTTTTTTTGGTTCAATTTCTATTTGTTGTTCATATTCCTGATGATAGTTACATCATTTCTACTATTTTATTATTTATTATTTACTGTATATAACCCAAATTTTCATTATTCTTGAATAATAGTATGGTGCTCATTTTCCTGTTATGGGTCTCTCTTAGCCTCTACTTCTTGAGTAAATGTGATTTGCTAAAAAGCAATAATCCATAGGATACAAGAAGGTCTGTTGCTTAGTTCAGCCATCATTCCTATGCTTATAAGTTAATATAATCTTACAACAAAATTAAATCTTCAATAGAACTTTAACATATTGATGCTTCATGTTTCTTATTAGGATGAAAAAGGAAAACCCAGGGCTAATACTGGTTTGTTTATTTATTAGTTTTGTTCTTTTTCTTTTTATAGGAAACAGTTTAGTATATTCCACCAAAAGAGGAATTGCAATAGGGAGGGGGGAAGGAATCATCCCAACCATCTAGTACAACCATGAGTTCATAAGGACATCCTTTTATTTGTATTATTAAAGATAGTTTTGGATAATGTGAGAAGTCTATCTAGACTCTAGGGCGATCCAATTTGAGGCTTAATTAAGTAGCACAACAAATATTCATTTATTTTTCAACGCAGCAACTTAGTTTACTTTAGTTCAGTGAAAAGGAGCACTCGGAGCTTGAAGAAGCTTCATTTTATTAGGAACTATCTCAATCTAACTTGAGCAGTGAACCGAATTGTACATTTATCCATAAAAATTTGCCTGTGTTAAACGTGATGTAATTGTTATCTCTTTGCTGTTGGCTTTTAACATTTTCTCCTTTTTATGTTCCCATCATTTTATGAGGCTTGTCTTCCTTGTAAACTTGTGAGATCTCACGTCGGTAGGAGAGGGGAACGAAACATTCCTTGTTAACTTGTGGAAACCTCTTCCTAGCAGACGCGTTTTAAAACCTTGAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGTAGTTATAGTTCAAATCATCTAGAAGATTTTTAAAATATTTTTCTATTCCTCTCCTATTCAAACTCCCAAATAAGAGTCATTAGCGAAGCCAGCCACAAAGTTTGTGTTTTCCTTTTTTTAAGGTGGTGCCAACGTGGGTTGCCAAATAGCTTCAAAGTCTTAGTGAGGTACCTGAACAATGACTGAGATGAAGAAGTACCTAAGCGACCAAGCACCCAAATAATAGAATCCCTATTTTTAGTCAGCCACCTCCCATGAAGGTTCAATGTGAGGCTGATCCATTACTTTAATGAAGCGTGTAGATTTTTCTTTTTTTCTGTTTTGCAAATTTCTTTTTCGAAGGTGCAGCTGTGACGTGTGAGCGTATATATCTGAAGTTAGGATTGAACGTTATCTGTAAGTATGTTAGATGGGTTGTTAATGCACACTAGTTATGAGGCTTCATTATGGTTTCCTCTACCCTAGGCCCTTAGGCTGTCTTTTGCTGCTATAAATTTCCTACCCTTTCCTAGAAAAAAAATCAAATAGTTTCTTTTGATGCATCTTATGGATTGGTTGAGTGTGAAATGAGGATGCTTATCACAAAAGTGTTTGAGCTTATTGTGTTAATGAGGGTGCACACTCCCTGCAGGGGTTTTATATCATTTTTGACTCTNTATCACAAAAGTGTTTGAGCTTATTGTGTTAATGAGGGTGCATACACTCCTGCAGGGGTTTTATATCATTTTTGACTTTTTTGCAGGTTCGAGCACTTACTGACAATATCCCAGTGATATTGGATGCTTTGAGGATGATATCTACTGTTGTGGAAGTACAGGTTAGTCATGGATTCTCAATTTATTTAGTTATTCACTGTGGGGTGTTATTATTTATTTATTTATTATTATTATTTGTGTGTGTGCGGGTGGTAGGAGGGGTAAATGAATTTTAATCATTTATATAATTGGGAGGCTTGAGTGGCCTCTTCAAGTATCTGGTGATTTGGTCTAAGTTTGTAGAATTAAATTTGTCAAAACACATCCTGAAAAAGGGTAATTGAGCACCACGGGTGCTTTAAGAAGTTTGCATGCTCAGTGTAAGAAGATAAAAGAAAGTAAAGGCTCGTATCATTCTCTGATTTTGTATTTGAATTGCTGTTTCTTAGGGGGATAAGGTAAGGAGGCGAAATGATTATAGTAGATGGATAATGCTCCCTTCAACTCAAACTTCTAATGTCGTTGCCCCATTAAACCCAGCAAACTCCAGTCAAGATATGCTGGCTGCTGGTGTTCAGAGTATCATGTTAGAGACTAATAATGGTAGCAATACGGAAGGCCGGGGTGATTTTTATGTCGAGACTCCGCAAAGTAGATCACCTCGGAATTTTAATACCCAGTCACAGCTGCCAGGCACAGGCAAGCCAAATATTGAGACAGGTTTGGATCACTCCTTCTCGGCAAGGAATTAGACCTTGTACATGCTGATGCCCATGTCTTTTATGAGGACAAAAAAAAAGTAGATATGGGTAGTAGAGACTAAGGAGATAAGTTATGAAACTGGTTTCTGTTAAATATGGAGGCCTTCTTGATGCACGATGAATCTTTTTTCTCTCGTGTGGTTAGGTAAAGGCGGCAAACTATGACGAATAAGGAGGCAAAATGATGGTAAAAAAGTGAGACAACTCTAAGAAGTTACAAAATACTGAACATTTTCTTTTATCGGCGACGTTTGTTACTTGAATTTATTTCCTTTTTGTTCTCCTCCTTGGTGATGATATGTACTCAACCATGGAGAATCCTGATATGCTTCCCCATGGTGGTGCCCCTCAGTTGGTTAGATATCCATCCTTGGAGGCAGAAAACCTTGAGTCATCTGGGAGAAGACAAGTAAAAATGGTTCTGCAAAGGAAGTAAAAATGCTGGCTGATCTTTCTTCATTGTTAATTTAGAGAGACTGACCTTCTTTGGATGCTGATTGCAGCTGCTGCTCCATCATGAAGGCCTTTTTCCTTTTTTTTCTTTTTCTTTTCTCCCTTTTTTTCCCAAGACTTCTTATGGTTTGCTCTATAAATGATGATGTCAAATGGAATAACTTTGCATATGGTACTTGTAACTTTTTGAATACTTGACTGCATAAAATGTGCCCGTCTGTGTATACAGCTTGTGGTTGGCGCATCTTGTTATGAACTTTATTTTCCATCTCTCTTTNNNNNNCTTTTTTTTTTTTTTTTTTTTGGAACCTTCATCTTTCAAGATTGGGCTCTGGAAACCTGCAT

mRNA sequence

TATTTAAGACTAAGGATTAAAGAGACAATTCACAAACCTAATATTGATCGATCAAATTGGGCCGAGGGAAGTCGAATGGAGGCCAAATAGGCGCACGATAGCGCAAGGGCAAAATAGCAAATGAGGGTATTATCGTAATTGTATGCACATAAACCAGCCAGGGCAAGGTATCCCGAAGAGTTTCTAGTGGGAAGCAACCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTGGTTCTGAGCCCGCTCCCCTGCTCTCCGGCATGGCCTTCGTTCTCGTCTCTCTCTTTCTCTTTCTGTGATCTGATTGCTGAAACTTTTGGAAACTCTTCACATTTAGGATTCCCTTCGTTTTGTCTGCCGATTGCTGTTTTTTAACTGGAGGGAAATTTCTTGATTGCTTTAGTACATTTACTCCTTCTGTTCGTCGATCAACGGACTTCGGGCTGAGAAAACCCCAACTCGCGCTGTTTTTCTTCTTGTTTGCCGTTCATTCTTATGGCTGCTCCTAATTTACCCGATGACAACCCTGTAACGGCAACCGGAGCCCACCATTCTCGTAACTCCGGCCAAAATATAAGCAGCCCTAAACCTCGCCGCGCCACTCGCCCAGTGTCGTCGCCGTGGACTCAGATTGTGCGTGGTGAGTTGGAAATCCCAGCCGTTGTTTCGGCTTCTCCATCGAATATGACATCTACGACGGCTATTGTCGAACCGTGTTCTCCTTCGCCTTCTTCTTTAGTTGCGGAAGAATCTGTTGGAGAGATATCAGAGAGTGGGAATGAGTCACAATCCAATGCGGGAAATAAGCCCGCCTGGAATAAGCTGTCTAATGGGGCCGCGAAGGTAGGGCCTGTTATGGGTGCTGTATCTTGGCCAGCCTTATCGGAGTCTACTCGGTTCTCAATCAAATCGTCTTCGGAATCACCGAAAGGCTCAGCTGATGGATCTGTTGGCCCTGCATGCCAGGGGATAGGTAATCCATCATCCTCACCACATAAAGAATTTAGTACTGCAAGCCCTATTCTGAATCCGACTCCGAATCCAAACCCAACTCATCGTCAGAAGCCAATGAAGCGTAGTGGTGTTGGCAATTCATACAGTGGTGGTGCCTCTCAACAGTCGACAATTTCAGGTTCTATAATTGATACTACTCCAAATAATCCATCGTCGAAGGACCACATTCAAAGGAGTTCATTTGCCTCACAATCACACAATGATCATAATTATCAACATCAACGTAACTTTAGGAGTCGTGGGTCTGGTTACTCACGTGGTGACAGTTTTCACCAGCACAGTCATGGTTCTAGGCGTGATCAAGATCGTGGAAACCATGATTGGAATCCCCATCGAAATTATGGACAGTCTCAGAGAGTTATTCAAAGATATATAAGGCCTCCACCACCTCCTAGTACTGCAACGTTTATTCCTTCATCTATGAGGCCTATTGGCGGTCCCATGCCTTTTCATGAATTTGGACCTCCAGTGGTATATGTCGCAGCTTCTCCTCAAGAGGCCCTTAGAGGTGTACCTTTTGTGGCTCCAATGCCACCTAATGCCGTGTTTTACCCTACTTCAGATCCTCAGTTATATGCTAAGATAGTCCATCAAATAGAATACTACTTCAGTGGTAAGAACTTAATAAAGGATACTTTCTTGAGAGGGAACATGGATGAAGATGGATGGGTTCCAATTCATTTAGTAGCAGGCTTTAAAATGGTTCGAGCACTTACTGACAATATCCCAGTGATATTGGATGCTTTGAGGATGATATCTACTGTTGTGGAAGTACAGGGGGATAAGGTAAGGAGGCGAAATGATTATAGTAGATGGATAATGCTCCCTTCAACTCAAACTTCTAATGTCGTTGCCCCATTAAACCCAGCAAACTCCAGTCAAGATATGCTGGCTGCTGGTGTTCAGAGTATCATGTTAGAGACTAATAATGGTAGCAATACGGAAGGCCGGGGTGATTTTTATGTCGAGACTCCGCAAAGTAGATCACCTCGGAATTTTAATACCCAGTCACAGCTGCCAGGCACAGGCAAGCCAAATATTGAGACAGGTAAAGGCGGCAAACTATGACGAATAAGGAGGCAAAATGATGGTAAAAAAGTGAGACAACTCTAAGAAGTTACAAAATACTGAACATTTTCTTTTATCGGCGACGTTTGTTACTTGAATTTATTTCCTTTTTGTTCTCCTCCTTGGTGATGATATGTACTCAACCATGGAGAATCCTGATATGCTTCCCCATGGTGGTGCCCCTCAGTTGGTTAGATATCCATCCTTGGAGGCAGAAAACCTTGAGTCATCTGGGAGAAGACAAGTAAAAATGGTTCTGCAAAGGAAGTAAAAATGCTGGCTGATCTTTCTTCATTGTTAATTTAGAGAGACTGACCTTCTTTGGATGCTGATTGCAGCTGCTGCTCCATCATGAAGGCCTTTTTCCTTTTTTTTCTTTTTCTTTTCTCCCTTTTTTTCCCAAGACTTCTTATGGTTTGCTCTATAAATGATGATGTCAAATGGAATAACTTTGCATATGGTACTTGTAACTTTTTGAATACTTGACTGCATAAAATGTGCCCGTCTGTGTATACAGCTTGTGGTTGGCGCATCTTGTTATGAACTTTATTTTCCATCTCTCTTTNNNNNNCTTTTTTTTTTTTTTTTTTTTGGAACCTTCATCTTTCAAGATTGGGCTCTGGAAACCTGCAT

Coding sequence (CDS)

ATGGCTGCTCCTAATTTACCCGATGACAACCCTGTAACGGCAACCGGAGCCCACCATTCTCGTAACTCCGGCCAAAATATAAGCAGCCCTAAACCTCGCCGCGCCACTCGCCCAGTGTCGTCGCCGTGGACTCAGATTGTGCGTGGTGAGTTGGAAATCCCAGCCGTTGTTTCGGCTTCTCCATCGAATATGACATCTACGACGGCTATTGTCGAACCGTGTTCTCCTTCGCCTTCTTCTTTAGTTGCGGAAGAATCTGTTGGAGAGATATCAGAGAGTGGGAATGAGTCACAATCCAATGCGGGAAATAAGCCCGCCTGGAATAAGCTGTCTAATGGGGCCGCGAAGGTAGGGCCTGTTATGGGTGCTGTATCTTGGCCAGCCTTATCGGAGTCTACTCGGTTCTCAATCAAATCGTCTTCGGAATCACCGAAAGGCTCAGCTGATGGATCTGTTGGCCCTGCATGCCAGGGGATAGGTAATCCATCATCCTCACCACATAAAGAATTTAGTACTGCAAGCCCTATTCTGAATCCGACTCCGAATCCAAACCCAACTCATCGTCAGAAGCCAATGAAGCGTAGTGGTGTTGGCAATTCATACAGTGGTGGTGCCTCTCAACAGTCGACAATTTCAGGTTCTATAATTGATACTACTCCAAATAATCCATCGTCGAAGGACCACATTCAAAGGAGTTCATTTGCCTCACAATCACACAATGATCATAATTATCAACATCAACGTAACTTTAGGAGTCGTGGGTCTGGTTACTCACGTGGTGACAGTTTTCACCAGCACAGTCATGGTTCTAGGCGTGATCAAGATCGTGGAAACCATGATTGGAATCCCCATCGAAATTATGGACAGTCTCAGAGAGTTATTCAAAGATATATAAGGCCTCCACCACCTCCTAGTACTGCAACGTTTATTCCTTCATCTATGAGGCCTATTGGCGGTCCCATGCCTTTTCATGAATTTGGACCTCCAGTGGTATATGTCGCAGCTTCTCCTCAAGAGGCCCTTAGAGGTGTACCTTTTGTGGCTCCAATGCCACCTAATGCCGTGTTTTACCCTACTTCAGATCCTCAGTTATATGCTAAGATAGTCCATCAAATAGAATACTACTTCAGTGGTAAGAACTTAATAAAGGATACTTTCTTGAGAGGGAACATGGATGAAGATGGATGGGTTCCAATTCATTTAGTAGCAGGCTTTAAAATGGTTCGAGCACTTACTGACAATATCCCAGTGATATTGGATGCTTTGAGGATGATATCTACTGTTGTGGAAGTACAGGGGGATAAGGTAAGGAGGCGAAATGATTATAGTAGATGGATAATGCTCCCTTCAACTCAAACTTCTAATGTCGTTGCCCCATTAAACCCAGCAAACTCCAGTCAAGATATGCTGGCTGCTGGTGTTCAGAGTATCATGTTAGAGACTAATAATGGTAGCAATACGGAAGGCCGGGGTGATTTTTATGTCGAGACTCCGCAAAGTAGATCACCTCGGAATTTTAATACCCAGTCACAGCTGCCAGGCACAGGCAAGCCAAATATTGAGACAGGTAAAGGCGGCAAACTATGA

Protein sequence

MAAPNLPDDNPVTATGAHHSRNSGQNISSPKPRRATRPVSSPWTQIVRGELEIPAVVSASPSNMTSTTAIVEPCSPSPSSLVAEESVGEISESGNESQSNAGNKPAWNKLSNGAAKVGPVMGAVSWPALSESTRFSIKSSSESPKGSADGSVGPACQGIGNPSSSPHKEFSTASPILNPTPNPNPTHRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDHNYQHQRNFRSRGSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHRNYGQSQRVIQRYIRPPPPPSTATFIPSSMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQDMLAAGVQSIMLETNNGSNTEGRGDFYVETPQSRSPRNFNTQSQLPGTGKPNIETGKGGKL
Homology
[Close]
BLAST of Cp4.1LG10g00080 vs. Swiss-Prot
Match: LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana GN=LARP1C PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.2e-57
Identity = 173/453 (38.19%), Postives = 243/453 (53.64%), Query Frame = 1 

Query: 20  SRNSGQNISS--PKPRRATRPVSSPWTQIVRGELE-IPAVVSASPSNMTSTTAIVEP--- 79
           S N G   +S    PRR +R VSSPWTQIVRGE E I A  + +  +   + A +EP   
Sbjct: 20  SGNHGSPTASVAQSPRRPSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIAS 79

Query: 80  ---CSPSPSSLVAEESVGEISESGNESQSNAGNKPAWNKLSNGAAKVGPVMGAVSWPALS 139
               +P+ + L  E + G+     +  Q NAG KP W + SNGA++VGPVMGA SWPALS
Sbjct: 80  VSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKRPSNGASEVGPVMGASSWPALS 139

Query: 140 ESTRF--------SIKSSSESPKGSADGSVGPACQGIGNPSSSPHKEFSTASPILNPTPN 199
           E+T+         S+KS  + P  S+  S  P  QGI N S    K+   A    NP P 
Sbjct: 140 ETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRA----NPNPT 199

Query: 200 PNPTHRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDH 259
           PN + ++   +R+G   S +G  SQ S   GS  +   +NPS +   Q++ FASQ+H   
Sbjct: 200 PNHSRQRSFKQRNGASGSANGTVSQPSA-QGSFTELPSHNPSPRGQNQKNGFASQNHGGT 259

Query: 260 NYQHQRNFRSRGSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHRNY------GQSQRVIQR 319
               QR+       Y   +  H  SHG RR+Q+ GN +W   R++       QSQR    
Sbjct: 260 ENPSQRD------SYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPA 319

Query: 320 YIRPPPPPSTATFIPSSMRPIGGPMPFH-EFGPPVVYVAASPQEALRGVPFVAPMPPN-A 379
           ++R P P  T   IP  M     P P H  F   +   +  P+     +P++ P+P    
Sbjct: 320 FVRHPSP--TVQPIPQFM--AAQPFPSHIPFPTELAQSSYYPR-----MPYMTPIPHGPQ 379

Query: 380 VFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDN 439
            FY   DP L+ K+  QI+YYFS +NLI D +LRG M+ +G+VP+ +VAGFK V  LTDN
Sbjct: 380 FFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDN 439

Query: 440 IPVILDALRMISTVVEVQGDKVRRRNDYSRWIM 448
           I  I++AL+  S  VEVQGD +R+R+++  W++
Sbjct: 440 IQQIVEALQN-SPHVEVQGDFIRKRDNWQNWVL 451

[Close]
BLAST of Cp4.1LG10g00080 vs. Swiss-Prot
Match: LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana GN=LARP1B PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 5.9e-33
Identity = 133/378 (35.19%), Postives = 196/378 (51.85%), Query Frame = 1 

Query: 93  SGNESQS--NAGNKP--AWNK-LSNGAAKVGPVMGAV-SWPALSESTRFS-IKSSS-ESP 152
           +GN S    NA  KP   WN   SN ++ VGPVMGA  SWPALS S R S IKS S ++ 
Sbjct: 61  TGNNSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDAS 120

Query: 153 KGSADGSVG--PACQGIGNPSSSPHKEFSTASPILNPTPNPNPTHRQKPMKRSGVGNSYS 212
           K   DGS    P  Q   N S++ +   S ++     +   N   ++KP +R+   +S  
Sbjct: 121 KPFPDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNNS--QRKPFRRNNNTSS-- 180

Query: 213 GGASQQSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDHNYQHQRNFRSRGSGYSRGDS 272
                 S+ S ++ +  P N   ++H QR   +  S N  N Q  RN     S Y RG+ 
Sbjct: 181 ------SSTSSNVSNAAPLNTRDQNHSQRGGGSFGSGNFRNSQRNRN----SSSYPRGEG 240

Query: 273 FHQHSHGSRRDQDRGNHDWNPHRNYG------QSQRVI-----QRYIRPPP-PPSTATFI 332
            H   HG+RR+ + GN     HRNY       Q QR +     Q  + PP  P S+A ++
Sbjct: 241 LH---HGNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGVGMIRPQMLMGPPSFPASSAQYM 300

Query: 333 PS-SMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIV 392
            +  +   GGP+ + ++   V     SP      +  V P P   +++   D  LY KI+
Sbjct: 301 AAPQLGSYGGPIIYPDYAQHVFMPHPSPDP----MGLVGPFPLQPMYFRNFDAILYNKIL 360

Query: 393 HQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVV 448
            Q+EYYFS  NL +D  LR  M+++GWVP+ ++A F+ +  LT+NI  IL+ALR  S VV
Sbjct: 361 TQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRS-SEVV 416

[Close]
BLAST of Cp4.1LG10g00080 vs. Swiss-Prot
Match: LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana GN=LARP1A PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.8e-19
Identity = 73/213 (34.27%), Postives = 102/213 (47.89%), Query Frame = 1 

Query: 316 PIGGPMPFHEFGP------PVVYVAASPQEALRGVPFVAPMPPNAVFYPTSDP------- 375
           P  GP P    GP      PV Y+   P  A+RG     P PP    YP +         
Sbjct: 220 PFMGPAPGFLVGPGPGFPGPVYYLPGPPPGAIRG-----PYPPRFAPYPVNQGPPILSPE 279

Query: 376 --QLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIPVILD 435
              L  +++ Q+EYYFS +NL  D +L   MDE+GWVP  ++AGFK V+A+T ++  I+ 
Sbjct: 280 KLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVY 339

Query: 436 ALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQDMLAAGVQSIMLE 495
           AL   S  VEVQGD++R+R+ +S WI      TS        A +  D      +SI   
Sbjct: 340 ALG-FSNSVEVQGDQIRKRDKWSDWIPASKKSTS--------AETIGDGDKDSPKSITSG 399

Query: 496 TNNGSNTEGR-----GDFYVETPQSRSPRNFNT 509
            N G+ ++G       DF  E  QS    N+ +
Sbjct: 400 DNFGNPSKGSSKPTVSDFSSEGAQSSRTNNYKS 418

[Close]
BLAST of Cp4.1LG10g00080 vs. Swiss-Prot
Match: LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-16
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1 

Query: 357 YPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIP 416
           YP  +  L   I  QIEYYFS +NL +D FLRG MDE G++PI L+AGF+ V+ALT N+ 
Sbjct: 208 YPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLN 267

Query: 417 VILDALRMISTVVEVQGDKVRRRNDYSRW 446
           +IL+AL+  ST VE+  +K+R++ +  +W
Sbjct: 268 LILEALK-DSTEVEIVDEKMRKKIEPEKW 295

[Close]
BLAST of Cp4.1LG10g00080 vs. Swiss-Prot
Match: LARP1_HUMAN (La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 357 YPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIP 416
           Y      L   I  QIEYYFS  NL +D FLR  MD DG++PI L+A F  V+ALT +I 
Sbjct: 396 YSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDIS 455

Query: 417 VILDALRMISTVVEVQGDKVRRRNDYSRWIMLP 450
           +I  AL+  S VVE+  +KVRRR +  +W + P
Sbjct: 456 LIFAALK-DSKVVEIVDEKVRRREEPEKWPLPP 487

[Close]
BLAST of Cp4.1LG10g00080 vs. TrEMBL
Match: A0A0A0KMK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507200 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.9e-139
Identity = 255/296 (86.15%), Postives = 270/296 (91.22%), Query Frame = 1 

Query: 229 IQRSSFASQSHNDHNYQHQRN-FRSRGSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHRNY 288
           +QRSSFASQSHNDHNYQHQ N FRSRGSGY RGDS H H+HGSRRDQDRGNHDWNPHRNY
Sbjct: 1   MQRSSFASQSHNDHNYQHQPNSFRSRGSGYPRGDSSHHHNHGSRRDQDRGNHDWNPHRNY 60

Query: 289 GQSQRVIQRYIRPPPPPSTATFIPSSMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFV 348
           GQ QRV+QRYIRPPPPPS ATFIPSSMRP+GGPMPFHEF PPVVYVAA PQEALR VPFV
Sbjct: 61  GQPQRVVQRYIRPPPPPSNATFIPSSMRPLGGPMPFHEFVPPVVYVAAPPQEALRSVPFV 120

Query: 349 APMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKM 408
           APMPPNAVF+P SDPQLYA+IVHQIEYYFS +NL+KDT+LR NMDEDGWVPIHLVAGFKM
Sbjct: 121 APMPPNAVFFPASDPQLYARIVHQIEYYFSDENLVKDTYLRRNMDEDGWVPIHLVAGFKM 180

Query: 409 VRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQ 468
           VR+LTDNIPVILDALR  STVVEVQGDKVRRRNDYS+WIMLPST TSN VAPL+PANSSQ
Sbjct: 181 VRSLTDNIPVILDALRSTSTVVEVQGDKVRRRNDYSKWIMLPSTPTSNEVAPLSPANSSQ 240

Query: 469 DMLAAGVQSIMLETNNGSNTEGRGDFYVETPQSRSPRNFNTQSQLPGTGKPNIETG 524
           D+LAAGVQSI LET N  +TE RGDF VE  QSRSPRNFN+QSQLPGTGKPNI TG
Sbjct: 241 DLLAAGVQSITLETYN--STEVRGDFKVEALQSRSPRNFNSQSQLPGTGKPNIGTG 294

[Close]
BLAST of Cp4.1LG10g00080 vs. TrEMBL
Match: M5VVT5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003845mg PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.9e-99
Identity = 261/545 (47.89%), Postives = 324/545 (59.45%), Query Frame = 1 

Query: 10  NPVTAT--GAHHSRNSGQNISSP--KPRRATRPVSSPWTQIVRGELEIPAVVSASPSNMT 69
           NP TA+       R++G+++SSP  + RRA R VSSPWTQIVRGE E  AV  +SPS   
Sbjct: 12  NPETASYPAVQSPRHAGESVSSPTTQSRRAARAVSSPWTQIVRGESEPIAVAPSSPSTAV 71

Query: 70  STTAIVE-PCSPSPSSLV-------------------AEESVGEISESGNESQSNAGNKP 129
           +  A+   P  P PSS                     AEESVGE SE+GN     AG +P
Sbjct: 72  TEPAVAAAPPPPPPSSSSSSQSQSNSAPQSNSSSPPPAEESVGEGSENGN-----AGKRP 131

Query: 130 AWNKLSNGAAKVGPVMGAVSWPALSESTRFSIKSSSESPKGSADGSVGPAC-QGIGNPSS 189
           AWNK SNGA +VGPVMGAVSWPALSES R S K S E  KG ++  +  +  QG G   +
Sbjct: 132 AWNKPSNGAIEVGPVMGAVSWPALSESARASTKLSPEPLKGVSEPPLSVSMSQGTGTTPT 191

Query: 190 SPHKEFSTASPILNPTPNPNPTHRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPS 249
           S  K+ +++S     TPN     RQ+ MKR+    S +GG  Q  + +G  ++T PNNPS
Sbjct: 192 SSPKQVNSSS-----TPNHTGPARQRSMKRNNASASSNGGLPQHQSSAGQGVETVPNNPS 251

Query: 250 SKDHIQRSSFASQSHNDHNYQHQRN-FRSRGSG-YSRGDSFHQHSHGSRRDQDRGNHDWN 309
            K+H  RS+  SQSH+++++  QRN FR+R  G + RGD  H H++  RRDQDRG  DWN
Sbjct: 252 PKEHTHRSAIGSQSHSNNDHPQQRNSFRNRNGGSHPRGDGSHHHNY--RRDQDRGGQDWN 311

Query: 310 PHRNYGQS------QRVIQRYIRP-----PPPPSTATFIPS-SMRPIGGPMPFHEFGPPV 369
            HRN+         QR + R +RP     PPPP+ A FI    MR  GGP+ F E  P +
Sbjct: 312 THRNFNNRDNHMHPQRSVPRMMRPHQTPPPPPPNAAQFIHQPQMRAFGGPIGF-EMQPQL 371

Query: 370 VYVAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGN 429
           VYV  +P E L GVPFVAPM    VF P  DPQL+ KI++QIEYYFS  NLIKDTFLR N
Sbjct: 372 VYVTHTPHEPL-GVPFVAPMRHPMVF-PAPDPQLHTKIINQIEYYFSNDNLIKDTFLRRN 431

Query: 430 MDEDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPS 489
           MD+ GWV I L+AGF  V  LTDNI +ILDA+RM STVVEVQGDK+RRRND+ RW+M P+
Sbjct: 432 MDDQGWVRIKLIAGFNKVMNLTDNIQLILDAMRM-STVVEVQGDKIRRRNDWMRWVM-PT 491

Query: 490 TQTSNVVAPLNPANSSQDMLAAGVQSIMLETNNGSNT-------------EGRGDFYVET 503
            Q  N         S QD+L+A +QSI L+    SN              EG G F V+ 
Sbjct: 492 AQPPNASGSQALGKSGQDILSAQIQSIALDEKTASNINIENSSQPQPSSGEGAGQFGVQA 539

[Close]
BLAST of Cp4.1LG10g00080 vs. TrEMBL
Match: E0CU57_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0349g00060 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.6e-99
Identity = 256/560 (45.71%), Postives = 327/560 (58.39%), Query Frame = 1 

Query: 10  NPVTATGAHHS-RNSGQNISSPKPRR--ATRPVSSPWTQIVRGELEIPAVVSASPSNMTS 69
           N    TG H S R S    SSPK RR  A   V+SPWTQ+VRGE E      +SP +   
Sbjct: 5   NSSAPTGPHLSPRYSPDGHSSPKSRRSAARGAVTSPWTQVVRGESESITAAPSSPVSSQE 64

Query: 70  TTAIVEPCSP------SPSSLVAEESVGEISESGNESQSNAGNKPAWNKLSNGAAKVGPV 129
              +   CSP      SP+S      V    ES +    NAG +PAWNK SNG A+VGPV
Sbjct: 65  QIVVSSDCSPTKATSDSPASPEDSSQVEAQLESSDNGNGNAGKRPAWNKPSNGVAEVGPV 124

Query: 130 MGAVSWPALSESTRFSIKSSSESPKGSADGSVG--PA---CQGIGNPSSSPHKEFSTASP 189
           MGA SWPALSES R S KS+S+S K   DGS+   PA    QG GN SS  HK+ +    
Sbjct: 125 MGASSWPALSESARASAKSASDSLKSPTDGSISTPPAQVHVQGSGNASSPSHKQVNN--- 184

Query: 190 ILNPTPNPNPTH----RQKPMKR---SGVGNSYSGGASQQSTISGSIIDTTPNNPSSKDH 249
             NP P+  P+H    RQK MKR   SG  +S + G  Q +   G +++  PNN S +DH
Sbjct: 185 --NPIPSSTPSHALPTRQKSMKRGDRSGGSSSANAGLPQPAAPQGPVMEVPPNNSSPRDH 244

Query: 250 I---------QRSSFASQSHNDHNYQHQRNFRSRGSG--YSRGDSFHQHSHGSRRDQDRG 309
                     QR  F  QSH+ ++Y HQR    +G+   +SRGD  H H +G RRDQDR 
Sbjct: 245 TNRSIHPEGGQRGGFVPQSHSGNDYPHQRGSYRKGNSAPHSRGDGSHHHGYGGRRDQDRV 304

Query: 310 NHDWNPHRNYGQSQ----RVIQR-YIRPPPPPSTATFIPSSMRPIGGPMPFHEFGPPV-- 369
           NHDWNPHRN+ +      RV+ R +IRPP   S     P  +RP G P+ + E   PV  
Sbjct: 305 NHDWNPHRNFNREPHMQPRVVARGFIRPPSHSSAQFIAPPHLRPFGNPILYQELASPVSQ 364

Query: 370 -VYVAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRG 429
            VYV A   + LR VPFVAPMP + +F+P  D QL+AK+V QI+YYFS +NLIKD +LR 
Sbjct: 365 VVYVPAPHADPLRTVPFVAPMP-HPMFFPPQDHQLHAKLVAQIDYYFSNENLIKDIYLRQ 424

Query: 430 NMDEDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLP 489
           NMDE GWVP+ L+AGFK V+ LT+NI +IL+A+R  STVVEVQGDK+R+R D+ +WIM P
Sbjct: 425 NMDEQGWVPVKLIAGFKKVKLLTENIQLILEAVR-TSTVVEVQGDKLRKRGDWMKWIMPP 484

Query: 490 STQTSNVVAPLNPANSSQDMLAAGVQSIML--ETNNGSNTEGRGDFYVETPQSRSPR-NF 527
           S Q S + +P +  +SS D LAA  Q++ L  +T N S      D +VE   SRS   + 
Sbjct: 485 SVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTNYSTVRSEADVHVEAFSSRSSSGDL 544

[Close]
BLAST of Cp4.1LG10g00080 vs. TrEMBL
Match: A0A067FV98_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039779mg PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 6.9e-97
Identity = 233/448 (52.01%), Postives = 301/448 (67.19%), Query Frame = 1 

Query: 55  AVVSASPSNMTSTTAIVEPCSPSPSSLVAEESVGEISESGNESQSNAGNK-PAWNKL-SN 114
           A+VS+S S  TS   +      + ++  A+E  G  +E GN    NAG+K P WN+  SN
Sbjct: 7   ALVSSSSSQSTSVIELA-----AAAAAAADEDNG--AECGN---GNAGSKRPPWNRQPSN 66

Query: 115 GAAKVGPVMGAVSWPALSESTR---FSIKSSSESPKGSADGSVGPAC-QGIGNPSSSPHK 174
           GAA++ PVMGA SWPALSE+TR    S KSSS+S KGS DGS   +  QG    +SS HK
Sbjct: 67  GAAEMEPVMGAHSWPALSETTRGSSSSTKSSSDSLKGSVDGSSSSSVLQGTAATNSSSHK 126

Query: 175 EFST-ASPILNPTPNPNPTHRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSKD 234
           + S  A+P  N T N   ++RQ+ MKR+   +S +GG  Q     GS+++   NNPS +D
Sbjct: 127 QVSNNANP--NSTTNHAASNRQRSMKRNNSHSSSNGGLPQPPASQGSVVEGRSNNPSPRD 186

Query: 235 HIQRSSFASQSHNDHNYQHQR-NFRSR-GSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHR 294
           H Q+S F SQ H  +++ H R +F+ R G+ + RGD  H H++G RRDQDRGN DWN HR
Sbjct: 187 HTQKSGFGSQFHGGNDHPHPRGSFKHRNGNQHPRGDGSHHHNYGGRRDQDRGNQDWNSHR 246

Query: 295 NYG------QSQRVIQRYIR------PPPPPSTATFIPSS-MRPIGGPMPFHEFGPPVVY 354
           NY       Q QRV+QR+ R      PPPPPS++ FIP   +RP G P+ F EF  PV Y
Sbjct: 247 NYSGRDAHMQPQRVVQRFTRHPPPPPPPPPPSSSPFIPPPPVRPFGSPIGFPEFASPVYY 306

Query: 355 VAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMD 414
           VAA+P EALRGVPFVAP+PP+AVF+P  DPQL+++IV QI+YYFS +NL+KDTFLR NMD
Sbjct: 307 VAAAPPEALRGVPFVAPIPPHAVFFPAPDPQLHSRIVTQIDYYFSNENLVKDTFLRQNMD 366

Query: 415 EDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQ 474
           + GWVPI L+AGF  V  LTDNI +ILDALR  STVVEVQGD++R+RND+ RWIM P  +
Sbjct: 367 DQGWVPIRLIAGFNKVSLLTDNIQLILDALRS-STVVEVQGDRIRKRNDWMRWIM-PPGK 426

Query: 475 TSNVVAPLNPANSSQDMLAAGVQSIMLE 481
            S++ +P +   S  DML+A VQSI L+
Sbjct: 427 FSSLPSPQSQGKSGIDMLSAQVQSISLD 440

[Close]
BLAST of Cp4.1LG10g00080 vs. TrEMBL
Match: A0A061DF68_THECC (Winged-helix DNA-binding transcription factor family protein, putative OS=Theobroma cacao GN=TCM_000149 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95
Identity = 258/521 (49.52%), Postives = 317/521 (60.84%), Query Frame = 1 

Query: 15  TGAHHSRNSGQNISSPKPRRATRPVSSPWTQIVRGELEIPAVVSASPSNMTSTTAIVEPC 74
           T A+HS +S       +  RATR VSSPWTQIVRGE E  A V  SPS  +S++ +    
Sbjct: 17  TAANHSPSSPN-----QSHRATRVVSSPWTQIVRGESEPIAGVPLSPSTSSSSSPLAAVI 76

Query: 75  SPSPSSLVAEESVGEISESGNESQSNAGNKPAWNKLSNGAAKVGPVMGAVSWPALSESTR 134
            P  ++ V EE V      G+    NAG +PAWNK SNGAA+ G VMGA  WPALSES R
Sbjct: 77  EPPVNAAVEEEGV---ENGGSGPNGNAGKRPAWNKPSNGAAEFGAVMGAHMWPALSESAR 136

Query: 135 FSIKSSSESPKGSADGSVGPA---CQGIGNP-SSSPHKEFS-TASPILNPTPNPNPTHRQ 194
            S KSSS+S K S DGS  PA    QG GN  SSS  K+ S   +   N TPN     RQ
Sbjct: 137 VSSKSSSDSSKASPDGSSSPAVPVSQGSGNALSSSSQKQVSNNVNSNSNATPNNAMPVRQ 196

Query: 195 KPMKRSGVGNSYSGGASQ-QSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDHN-YQHQ 254
           + MKR+   ++ +GG +Q Q    G + + T NNP S+DHIQR  F SQ H+  N + H 
Sbjct: 197 RSMKRNSNNSASNGGLTQPQPQPQGPVAEATANNP-SRDHIQRGGFVSQPHSGGNDHPHP 256

Query: 255 RN-FRSRGSG-YSRGDSFHQHSHGSRRDQDRGNHDWNPH----RNYGQSQRVIQRYIR-- 314
           RN FR+R  G + RGD  H  ++G RR+QD GN DWN      R+     RV+ R +R  
Sbjct: 257 RNSFRNRNGGPHPRGDGSHHQNYGGRRNQDHGNQDWNGRNFNSRDGHMQPRVVSRLMRHP 316

Query: 315 -PPPPPSTATFI-PSSMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFVAPMPPNAVFY 374
            PPPPP+TA FI P  +RP G PM F E    V  + A P E+LRGVPFVAPMP   VF+
Sbjct: 317 PPPPPPNTAPFITPPPVRPFGTPMGFPELPSHVYLLPAPPPESLRGVPFVAPMP--QVFF 376

Query: 375 PTSDP---QLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDN 434
           P  +P   QL+A+IV+QI+YYFS +NLIKDT+LR NMD+ GWV I L+AGFK V  LTDN
Sbjct: 377 PAPEPQDHQLHARIVNQIDYYFSNENLIKDTYLRQNMDDQGWVSIKLIAGFKKVSFLTDN 436

Query: 435 IPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQDMLAAGV 494
           I +ILDALR  STVVEVQGDKVR+R D+ RWIM PS Q         P  S QDML + V
Sbjct: 437 IQLILDALRS-STVVEVQGDKVRKRIDWMRWIMPPSVQF--------PTMSGQDMLVSRV 496

Query: 495 QSIMLE--TNNGSNTEGRGDFYVETPQSRS-PRNFNTQSQL 513
           Q+I L+  T N S    + D Y +    RS   +F+ QS+L
Sbjct: 497 QNISLDQRTANQSGARSQEDAYADGLSGRSLSGDFSNQSRL 517

[Close]
BLAST of Cp4.1LG10g00080 vs. TAIR10
Match: AT4G35890.1 (AT4G35890.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 225.7 bits (574), Expect = 6.6e-59
Identity = 173/453 (38.19%), Postives = 243/453 (53.64%), Query Frame = 1 

Query: 20  SRNSGQNISS--PKPRRATRPVSSPWTQIVRGELE-IPAVVSASPSNMTSTTAIVEP--- 79
           S N G   +S    PRR +R VSSPWTQIVRGE E I A  + +  +   + A +EP   
Sbjct: 20  SGNHGSPTASVAQSPRRPSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIAS 79

Query: 80  ---CSPSPSSLVAEESVGEISESGNESQSNAGNKPAWNKLSNGAAKVGPVMGAVSWPALS 139
               +P+ + L  E + G+     +  Q NAG KP W + SNGA++VGPVMGA SWPALS
Sbjct: 80  VSVAAPTAAVLTVEAAAGDEKSEASGGQDNAGKKPVWKRPSNGASEVGPVMGASSWPALS 139

Query: 140 ESTRF--------SIKSSSESPKGSADGSVGPACQGIGNPSSSPHKEFSTASPILNPTPN 199
           E+T+         S+KS  + P  S+  S  P  QGI N S    K+   A    NP P 
Sbjct: 140 ETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRA----NPNPT 199

Query: 200 PNPTHRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDH 259
           PN + ++   +R+G   S +G  SQ S   GS  +   +NPS +   Q++ FASQ+H   
Sbjct: 200 PNHSRQRSFKQRNGASGSANGTVSQPSA-QGSFTELPSHNPSPRGQNQKNGFASQNHGGT 259

Query: 260 NYQHQRNFRSRGSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHRNY------GQSQRVIQR 319
               QR+       Y   +  H  SHG RR+Q+ GN +W   R++       QSQR    
Sbjct: 260 ENPSQRD------SYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPA 319

Query: 320 YIRPPPPPSTATFIPSSMRPIGGPMPFH-EFGPPVVYVAASPQEALRGVPFVAPMPPN-A 379
           ++R P P  T   IP  M     P P H  F   +   +  P+     +P++ P+P    
Sbjct: 320 FVRHPSP--TVQPIPQFM--AAQPFPSHIPFPTELAQSSYYPR-----MPYMTPIPHGPQ 379

Query: 380 VFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDN 439
            FY   DP L+ K+  QI+YYFS +NLI D +LRG M+ +G+VP+ +VAGFK V  LTDN
Sbjct: 380 FFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDN 439

Query: 440 IPVILDALRMISTVVEVQGDKVRRRNDYSRWIM 448
           I  I++AL+  S  VEVQGD +R+R+++  W++
Sbjct: 440 IQQIVEALQN-SPHVEVQGDFIRKRDNWQNWVL 451

[Close]
BLAST of Cp4.1LG10g00080 vs. TAIR10
Match: AT5G66100.1 (AT5G66100.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 143.7 bits (361), Expect = 3.3e-34
Identity = 133/378 (35.19%), Postives = 196/378 (51.85%), Query Frame = 1 

Query: 93  SGNESQS--NAGNKP--AWNK-LSNGAAKVGPVMGAV-SWPALSESTRFS-IKSSS-ESP 152
           +GN S    NA  KP   WN   SN ++ VGPVMGA  SWPALS S R S IKS S ++ 
Sbjct: 62  TGNNSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDAS 121

Query: 153 KGSADGSVG--PACQGIGNPSSSPHKEFSTASPILNPTPNPNPTHRQKPMKRSGVGNSYS 212
           K   DGS    P  Q   N S++ +   S ++     +   N   ++KP +R+   +S  
Sbjct: 122 KPFPDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNNS--QRKPFRRNNNTSS-- 181

Query: 213 GGASQQSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDHNYQHQRNFRSRGSGYSRGDS 272
                 S+ S ++ +  P N   ++H QR   +  S N  N Q  RN     S Y RG+ 
Sbjct: 182 ------SSTSSNVSNAAPLNTRDQNHSQRGGGSFGSGNFRNSQRNRN----SSSYPRGEG 241

Query: 273 FHQHSHGSRRDQDRGNHDWNPHRNYG------QSQRVI-----QRYIRPPP-PPSTATFI 332
            H   HG+RR+ + GN     HRNY       Q QR +     Q  + PP  P S+A ++
Sbjct: 242 LH---HGNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGVGMIRPQMLMGPPSFPASSAQYM 301

Query: 333 PS-SMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIV 392
            +  +   GGP+ + ++   V     SP      +  V P P   +++   D  LY KI+
Sbjct: 302 AAPQLGSYGGPIIYPDYAQHVFMPHPSPDP----MGLVGPFPLQPMYFRNFDAILYNKIL 361

Query: 393 HQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVV 448
            Q+EYYFS  NL +D  LR  M+++GWVP+ ++A F+ +  LT+NI  IL+ALR  S VV
Sbjct: 362 TQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRS-SEVV 417

[Close]
BLAST of Cp4.1LG10g00080 vs. TAIR10
Match: AT5G21160.3 (AT5G21160.3 LA RNA-binding protein)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-20
Identity = 73/213 (34.27%), Postives = 102/213 (47.89%), Query Frame = 1 

Query: 316 PIGGPMPFHEFGP------PVVYVAASPQEALRGVPFVAPMPPNAVFYPTSDP------- 375
           P  GP P    GP      PV Y+   P  A+RG     P PP    YP +         
Sbjct: 220 PFMGPAPGFLVGPGPGFPGPVYYLPGPPPGAIRG-----PYPPRFAPYPVNQGPPILSPE 279

Query: 376 --QLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIPVILD 435
              L  +++ Q+EYYFS +NL  D +L   MDE+GWVP  ++AGFK V+A+T ++  I+ 
Sbjct: 280 KLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVY 339

Query: 436 ALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQDMLAAGVQSIMLE 495
           AL   S  VEVQGD++R+R+ +S WI      TS        A +  D      +SI   
Sbjct: 340 ALG-FSNSVEVQGDQIRKRDKWSDWIPASKKSTS--------AETIGDGDKDSPKSITSG 399

Query: 496 TNNGSNTEGR-----GDFYVETPQSRSPRNFNT 509
            N G+ ++G       DF  E  QS    N+ +
Sbjct: 400 DNFGNPSKGSSKPTVSDFSSEGAQSSRTNNYKS 418

[Close]
BLAST of Cp4.1LG10g00080 vs. TAIR10
Match: AT5G46250.1 (AT5G46250.1 RNA-binding protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-06
Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 1 

Query: 349 PMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNM--DEDGWVPIHLVAGFK 408
           P+  + V  P  +  L  KI+ Q+EYYFS +NL  D FL   M  ++ G+VPI  +A F 
Sbjct: 90  PVETDGVVVPIDE--LNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFH 149

Query: 409 MVRALTDNIPVILDALRMIS-TVVEVQGDKVRR 439
            ++ LT +  +I+ AL+  S  VV     KV+R
Sbjct: 150 KMKKLTRDHALIVSALKESSFLVVSADEKKVKR 180

[Close]
BLAST of Cp4.1LG10g00080 vs. TAIR10
Match: AT2G43970.1 (AT2G43970.1 RNA-binding protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-06
Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 1 

Query: 367 KIVHQIEYYFSGKNLIKDTFLRGNM--DEDGWVPIHLVAGFKMVRALTDNIPVILDALRM 426
           KIV+Q+EYYFS  NL     L   +  D +G+VPIH+VA FK ++A+ +N   +   L+ 
Sbjct: 196 KIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQN 255

Query: 427 ISTV-VEVQGDKVRR 439
            + + V   G KVRR
Sbjct: 256 SAKLFVSEDGKKVRR 270

[Close]
BLAST of Cp4.1LG10g00080 vs. NCBI nr
Match: gi|659080564|ref|XP_008440861.1| (PREDICTED: la-related protein 1C-like [Cucumis melo])

HSP 1 Score: 793.1 bits (2047), Expect = 3.0e-226
Identity = 424/546 (77.66%), Postives = 460/546 (84.25%), Query Frame = 1 

Query: 1   MAAPNLPDDNPVTATGAHHSRNSGQNISSPKPRRATRPVSSPWTQIVRGELEIPAVVSAS 60
           MAA NL D+NP  ATG HHSR+SGQNISSPK RR+ RPVSSPWTQIVRGELEIPAVV +S
Sbjct: 1   MAATNLSDNNPAMATGVHHSRHSGQNISSPKSRRSPRPVSSPWTQIVRGELEIPAVVPSS 60

Query: 61  PSNMTSTTAIVEPCSPSPSS-----LVAEESVG-EISESGNESQSNAGNKPAWNKLSNGA 120
           PSN+TS+ AIVEP SPSPSS     L  EE  G E S+SGNES SNAGNKPAWNKLSNGA
Sbjct: 61  PSNVTSSAAIVEPRSPSPSSSPSSSLTVEEPAGAERSDSGNESLSNAGNKPAWNKLSNGA 120

Query: 121 AKVGPVMGAVSWPALSESTRFSIKSSSESPKGSADGSVGPACQGIGNPSSSPHKEFSTAS 180
            +VGPVMGAVSWPALSESTRF+ KSSS+SPK SADGS GPAC+G GNP SSP+K+  +AS
Sbjct: 121 VEVGPVMGAVSWPALSESTRFTNKSSSDSPKDSADGSAGPACEGTGNPPSSPYKKGISAS 180

Query: 181 PILNPTPNPNPT--------------HRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTP 240
           P  NPTP   PT              HRQK MKRSG  +SYSGG SQQS  S S IDTTP
Sbjct: 181 PSPNPTPAATPTLTPTPAATPTLTPTHRQKSMKRSGAASSYSGGVSQQSATSVSTIDTTP 240

Query: 241 NNPSSKDHIQRSSFASQSHNDHNYQHQR---NFRSRGSGYSRGDSFHQHSHGSRRDQDRG 300
           +NPSSKDH+QR+SFASQSHNDHNYQHQ    +FRSRGSGY RGDS H H+HGSRRDQDRG
Sbjct: 241 SNPSSKDHMQRNSFASQSHNDHNYQHQHQPNSFRSRGSGYPRGDSSHHHNHGSRRDQDRG 300

Query: 301 NHDWNPHRNYGQSQRVIQRYIRPPPPPSTATFIPSSMRPIGGPMPFHEFGPPVVYVAASP 360
           NHDWNPHRNYGQ QRV+QRYIRPPPPPS ATFIPSSMRP+GGP+PFHEF PPVVYVAA P
Sbjct: 301 NHDWNPHRNYGQPQRVVQRYIRPPPPPSNATFIPSSMRPLGGPIPFHEFVPPVVYVAAPP 360

Query: 361 QEALRGVPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWV 420
           QEALR VPFVAPMPPNAVF+P SDPQLYA+IVHQIEYYFS +NL+KDT+LR NMDEDGWV
Sbjct: 361 QEALRSVPFVAPMPPNAVFFPASDPQLYARIVHQIEYYFSDENLVKDTYLRRNMDEDGWV 420

Query: 421 PIHLVAGFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVV 480
           PIHLVAGFKMVR+LTDNIPVILDALR  STVVEVQGDKVRRRNDYS+WIMLPST TSN V
Sbjct: 421 PIHLVAGFKMVRSLTDNIPVILDALRSTSTVVEVQGDKVRRRNDYSKWIMLPSTPTSNDV 480

Query: 481 APLNPANSSQDMLAAGVQSIMLETNNGSNTEGRGDFYVETPQSRSPRNFNTQSQLPGTGK 524
           APL+PANSSQD+LAAGVQ+I LET N  +T+ RGDF VE  QSRSPRNFN+QSQLPGTGK
Sbjct: 481 APLSPANSSQDLLAAGVQNITLETYN--STDVRGDFKVEALQSRSPRNFNSQSQLPGTGK 540

[Close]
BLAST of Cp4.1LG10g00080 vs. NCBI nr
Match: gi|778719801|ref|XP_004134845.2| (PREDICTED: la-related protein 1C-like [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 7.9e-155
Identity = 284/333 (85.29%), Postives = 300/333 (90.09%), Query Frame = 1 

Query: 192 MKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSKDHIQRSSFASQSHNDHNYQHQRN-F 251
           MKRSG  +SYSGG SQQS  S S IDTTPNNPSSKDH+QRSSFASQSHNDHNYQHQ N F
Sbjct: 1   MKRSGAASSYSGGVSQQSATSVSTIDTTPNNPSSKDHMQRSSFASQSHNDHNYQHQPNSF 60

Query: 252 RSRGSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHRNYGQSQRVIQRYIRPPPPPSTATFI 311
           RSRGSGY RGDS H H+HGSRRDQDRGNHDWNPHRNYGQ QRV+QRYIRPPPPPS ATFI
Sbjct: 61  RSRGSGYPRGDSSHHHNHGSRRDQDRGNHDWNPHRNYGQPQRVVQRYIRPPPPPSNATFI 120

Query: 312 PSSMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFVAPMPPNAVFYPTSDPQLYAKIVH 371
           PSSMRP+GGPMPFHEF PPVVYVAA PQEALR VPFVAPMPPNAVF+P SDPQLYA+IVH
Sbjct: 121 PSSMRPLGGPMPFHEFVPPVVYVAAPPQEALRSVPFVAPMPPNAVFFPASDPQLYARIVH 180

Query: 372 QIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKMVRALTDNIPVILDALRMISTVVE 431
           QIEYYFS +NL+KDT+LR NMDEDGWVPIHLVAGFKMVR+LTDNIPVILDALR  STVVE
Sbjct: 181 QIEYYFSDENLVKDTYLRRNMDEDGWVPIHLVAGFKMVRSLTDNIPVILDALRSTSTVVE 240

Query: 432 VQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQDMLAAGVQSIMLETNNGSNTEGR 491
           VQGDKVRRRNDYS+WIMLPST TSN VAPL+PANSSQD+LAAGVQSI LET N  +TE R
Sbjct: 241 VQGDKVRRRNDYSKWIMLPSTPTSNEVAPLSPANSSQDLLAAGVQSITLETYN--STEVR 300

Query: 492 GDFYVETPQSRSPRNFNTQSQLPGTGKPNIETG 524
           GDF VE  QSRSPRNFN+QSQLPGTGKPNI TG
Sbjct: 301 GDFKVEALQSRSPRNFNSQSQLPGTGKPNIGTG 331

[Close]
BLAST of Cp4.1LG10g00080 vs. NCBI nr
Match: gi|700193742|gb|KGN48946.1| (hypothetical protein Csa_6G507200 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 2.7e-139
Identity = 255/296 (86.15%), Postives = 270/296 (91.22%), Query Frame = 1 

Query: 229 IQRSSFASQSHNDHNYQHQRN-FRSRGSGYSRGDSFHQHSHGSRRDQDRGNHDWNPHRNY 288
           +QRSSFASQSHNDHNYQHQ N FRSRGSGY RGDS H H+HGSRRDQDRGNHDWNPHRNY
Sbjct: 1   MQRSSFASQSHNDHNYQHQPNSFRSRGSGYPRGDSSHHHNHGSRRDQDRGNHDWNPHRNY 60

Query: 289 GQSQRVIQRYIRPPPPPSTATFIPSSMRPIGGPMPFHEFGPPVVYVAASPQEALRGVPFV 348
           GQ QRV+QRYIRPPPPPS ATFIPSSMRP+GGPMPFHEF PPVVYVAA PQEALR VPFV
Sbjct: 61  GQPQRVVQRYIRPPPPPSNATFIPSSMRPLGGPMPFHEFVPPVVYVAAPPQEALRSVPFV 120

Query: 349 APMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVAGFKM 408
           APMPPNAVF+P SDPQLYA+IVHQIEYYFS +NL+KDT+LR NMDEDGWVPIHLVAGFKM
Sbjct: 121 APMPPNAVFFPASDPQLYARIVHQIEYYFSDENLVKDTYLRRNMDEDGWVPIHLVAGFKM 180

Query: 409 VRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPSTQTSNVVAPLNPANSSQ 468
           VR+LTDNIPVILDALR  STVVEVQGDKVRRRNDYS+WIMLPST TSN VAPL+PANSSQ
Sbjct: 181 VRSLTDNIPVILDALRSTSTVVEVQGDKVRRRNDYSKWIMLPSTPTSNEVAPLSPANSSQ 240

Query: 469 DMLAAGVQSIMLETNNGSNTEGRGDFYVETPQSRSPRNFNTQSQLPGTGKPNIETG 524
           D+LAAGVQSI LET N  +TE RGDF VE  QSRSPRNFN+QSQLPGTGKPNI TG
Sbjct: 241 DLLAAGVQSITLETYN--STEVRGDFKVEALQSRSPRNFNSQSQLPGTGKPNIGTG 294

[Close]
BLAST of Cp4.1LG10g00080 vs. NCBI nr
Match: gi|659080562|ref|XP_008440860.1| (PREDICTED: la-related protein 1C [Cucumis melo])

HSP 1 Score: 457.6 bits (1176), Expect = 2.9e-125
Identity = 294/520 (56.54%), Postives = 359/520 (69.04%), Query Frame = 1 

Query: 1   MAAPNLPDDNPVTATGAHHS-RNSGQNI-----SSPKP---RRATRPVSS-PWTQIVRGE 60
           MAA NLPD + VTA+ A HS RNSGQN      SSPK    R   R VSS PWT+IVRGE
Sbjct: 1   MAASNLPDADSVTASIADHSPRNSGQNNNSSSGSSPKSSSRRSGGRTVSSSPWTRIVRGE 60

Query: 61  LEIPAVVSASPSNMTSTTAIVEPCSPSPSSLVAEESVGEISESGNESQSNAGNKPAWNKL 120
           +++ AVVS+S     S TA+VEP S   SS   EE VGE  + GN S +NAG KPAWNKL
Sbjct: 61  IDVAAVVSSS----ASPTAVVEPVSFFSSS---EEPVGESYDGGNGSTANAGKKPAWNKL 120

Query: 121 SNGAAKVGPVMGAVSWPALSESTRFSIKSSSESPKGSADGSVGPACQGIGNPSSSPHKEF 180
           +NG  + GPVMGAVSWPALSES + + KSSS+S K   DGS G   QG G  SS+P  + 
Sbjct: 121 ANGT-EAGPVMGAVSWPALSESAKATPKSSSDSLKSLGDGSTG--AQGTGTSSSAPSNKE 180

Query: 181 STASPILNPTPNPNPTH----RQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSK 240
                 ++P P+    H    RQK M+R+G  NSY+    QQS  S  +IDT PNN SSK
Sbjct: 181 GNND--VSPNPDSTLAHPITSRQKSMRRNGSSNSYNSNLPQQSAPSSPVIDTAPNN-SSK 240

Query: 241 DHIQRSSF-ASQSHNDHNYQHQRN-FRSRGSG-YSRGDSFHQHSHGSRRDQDRGNHDWNP 300
           D  QR++F +SQSHNDH +Q  RN FRSRG G + RGD+ H H++GSRRD DRGN DWN 
Sbjct: 241 DQTQRTTFVSSQSHNDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNS 300

Query: 301 HRNYG-QSQRVIQRYIRP--PPPPSTATFIPS-SMRPIGGPMPFHEFGPPVVYVAASPQE 360
           +RNY  Q  RV+ R+IRP  PPPP+T  +I S +MR IGGP+PF +F PPVVY+   P E
Sbjct: 301 NRNYNAQPHRVVHRFIRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPE 360

Query: 361 ALRGVPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPI 420
           ALRGVPFVAP+ PNA+F+   DPQLYA IV QIEYYFSG+NLIKDTFLR NM+E+GWVP+
Sbjct: 361 ALRGVPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPV 420

Query: 421 HLVAGFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPS--TQTSNVV 480
            L+A F  V+ LT+NI  ILDAL+  STVVEV+GD VRRR+DY RWI+ P      S  +
Sbjct: 421 KLIASFSKVQRLTENIQTILDALQS-STVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPL 480

Query: 481 APLNPANSSQDMLAAGVQSIMLETNNGSNTE-GRGDFYVE 497
           +PL+P +S+QDMLA GVQ I LE  N   +E G+G+ +V+
Sbjct: 481 SPLSPGSSNQDMLAGGVQGIALENVNHKVSEGGQGEVHVD 506

[Close]
BLAST of Cp4.1LG10g00080 vs. NCBI nr
Match: gi|449434124|ref|XP_004134846.1| (PREDICTED: la-related protein 1C [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 7.2e-124
Identity = 290/516 (56.20%), Postives = 357/516 (69.19%), Query Frame = 1 

Query: 1   MAAPNLPDDNPVTATGAHHS-RNSGQNI-----SSPKP---RRATRPVSS-PWTQIVRGE 60
           MAA NLPD + VTA+ A HS RNSGQN      SSPK    R   R VSS PWT+IVRGE
Sbjct: 1   MAASNLPDADSVTASIADHSPRNSGQNNNSSSGSSPKSSSRRSGGRTVSSSPWTRIVRGE 60

Query: 61  LEIPAVVSASPSNMTSTTAIVEPCSPSPSSLVAEESVGEISESGNESQSNAGNKPAWNKL 120
           +++ AVVS+S     S TA+VEP S   SS  +EE VGE  + GN S +NAG KPAWNKL
Sbjct: 61  IDVAAVVSSS----ASPTAVVEPVSFFSSSS-SEEPVGESYDGGNGSTANAGKKPAWNKL 120

Query: 121 SNGAAKVGPVMGAVSWPALSESTRFSIKSSSESPKGSADGSVGPACQGIGNPSSSPHKEF 180
           +NG  + GPVMGAVSWPALSES + + KSSS+S K   DGS G    G  + +SS  +  
Sbjct: 121 ANG-TEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQGTGTSSSASSNKEGN 180

Query: 181 STASPILNPTPNPNPTHRQKPMKRSGVGNSYSGGASQQSTISGSIIDTTPNNPSSKDHIQ 240
           +  SP  + T     T RQK M+R+G  NSY+    QQS  S  +IDT PNN S KD  Q
Sbjct: 181 NDVSPNPDSTLTHPITSRQKSMRRNGSSNSYNSSLPQQSAPSSPVIDTAPNN-SPKDQTQ 240

Query: 241 RSSF-ASQSHNDHNYQHQRN-FRSRGSG-YSRGDSFHQHSHGSRRDQDRGNHDWNPHRNY 300
           R++F +SQSH+DH +Q  RN +RSRG G + RGD+ H H++GSRRD DRGN DWN +RNY
Sbjct: 241 RTTFVSSQSHSDHGHQQPRNSYRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNY 300

Query: 301 -GQSQRVIQRYIR--PPPPPSTATFIPS-SMRPIGGPMPFHEFGPPVVYVAASPQEALRG 360
             Q  RV+ R+IR  PPPPP+T  +I S +MR IGGP+PF +F PPVVY+   P EALRG
Sbjct: 301 NAQPHRVVHRFIRPSPPPPPNTTGYISSPTMRAIGGPLPFPDFAPPVVYIGPPPPEALRG 360

Query: 361 VPFVAPMPPNAVFYPTSDPQLYAKIVHQIEYYFSGKNLIKDTFLRGNMDEDGWVPIHLVA 420
           VPFVAP+ PNA+F+   DPQLYA IV QIEYYFSG+NLIKDTFLR NM+E+GWVP+ L+A
Sbjct: 361 VPFVAPISPNAMFFHGPDPQLYAMIVSQIEYYFSGENLIKDTFLRQNMNEEGWVPVKLIA 420

Query: 421 GFKMVRALTDNIPVILDALRMISTVVEVQGDKVRRRNDYSRWIMLPS--TQTSNVVAPLN 480
            F  V+ LT+NI  ILDAL+  STVVEV+GD VRRR+DY RWI+ P      S  ++PL+
Sbjct: 421 SFSKVQRLTENIQTILDALQS-STVVEVKGDTVRRRHDYDRWIIRPGQVPNISGPLSPLS 480

Query: 481 PANSSQDMLAAGVQSIMLETNNGSNTE-GRGDFYVE 497
           P +S QDMLAAGV+ I LE  N   +E G+GD +V+
Sbjct: 481 PGSSKQDMLAAGVKGIALENINHRVSEGGQGDVHVD 508

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g00080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LRP1C_ARATH1.2e-5738.19La-related protein 1C OS=Arabidopsis thaliana GN=LARP1C PE=1 SV=1[more]
LRP1B_ARATH5.9e-3335.19La-related protein 1B OS=Arabidopsis thaliana GN=LARP1B PE=1 SV=2[more]
LRP1A_ARATH2.8e-1934.27La-related protein 1A OS=Arabidopsis thaliana GN=LARP1A PE=1 SV=1[more]
LAR1B_HUMAN2.9e-1649.44La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2[more]
LARP1_HUMAN2.3e-1347.31La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2[more]
BLAST of Cp4.1LG10g00080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMK2_CUCSA1.9e-13986.15Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507200 PE=4 SV=1[more]
M5VVT5_PRUPE1.9e-9947.89Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003845mg PE=4 SV=1[more]
E0CU57_VITVI5.6e-9945.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0349g00060 PE=4 SV=... [more]
A0A067FV98_CITSI6.9e-9752.01Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039779mg PE=4 S... [more]
A0A061DF68_THECC1.3e-9549.52Winged-helix DNA-binding transcription factor family protein, putative OS=Theobr... [more]
BLAST of Cp4.1LG10g00080 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35890.16.6e-5938.19 winged-helix DNA-binding transcription factor family protein[more]
AT5G66100.13.3e-3435.19 winged-helix DNA-binding transcription factor family protein[more]
AT5G21160.31.6e-2034.27 LA RNA-binding protein[more]
AT5G46250.11.0e-0637.63 RNA-binding protein[more]
AT2G43970.11.0e-0641.33 RNA-binding protein[more]
BLAST of Cp4.1LG10g00080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080564|ref|XP_008440861.1|3.0e-22677.66PREDICTED: la-related protein 1C-like [Cucumis melo][more]
gi|778719801|ref|XP_004134845.2|7.9e-15585.29PREDICTED: la-related protein 1C-like [Cucumis sativus][more]
gi|700193742|gb|KGN48946.1|2.7e-13986.15hypothetical protein Csa_6G507200 [Cucumis sativus][more]
gi|659080562|ref|XP_008440860.1|2.9e-12556.54PREDICTED: la-related protein 1C [Cucumis melo][more]
gi|449434124|ref|XP_004134846.1|7.2e-12456.20PREDICTED: la-related protein 1C [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011991Winged helix-turn-helix DNA-binding domain
IPR006630La_HTH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g00080.1Cp4.1LG10g00080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006630RNA-binding protein Lupus LaPFAMPF05383Lacoord: 368..423
score: 2.8
IPR006630RNA-binding protein Lupus LaSMARTSM00715lacoord: 362..439
score: 4.8
IPR006630RNA-binding protein Lupus LaPROFILEPS50961HTH_LAcoord: 358..448
score: 25
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 359..441
score: 4.0
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 356..447
score: 1.54
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 59..458
score: 1.6E
NoneNo IPR availablePANTHERPTHR22792:SF59LA-RELATED PROTEIN 1B-RELATEDcoord: 59..458
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g00080Wax gourdcpewgoB0097
Cp4.1LG10g00080Wax gourdcpewgoB0071
Cp4.1LG10g00080Cucurbita pepo (Zucchini)cpecpeB061
Cp4.1LG10g00080Cucurbita pepo (Zucchini)cpecpeB066
Cp4.1LG10g00080Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g00080Cucumber (Gy14) v1cgycpeB0033
Cp4.1LG10g00080Cucumber (Gy14) v1cgycpeB0843
Cp4.1LG10g00080Cucurbita maxima (Rimu)cmacpeB557
Cp4.1LG10g00080Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g00080Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g00080Cucurbita moschata (Rifu)cmocpeB511
Cp4.1LG10g00080Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g00080Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g00080Wild cucumber (PI 183967)cpecpiB064
Cp4.1LG10g00080Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g00080Cucumber (Chinese Long) v2cpecuB069
Cp4.1LG10g00080Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g00080Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g00080Bottle gourd (USVL1VR-Ls)cpelsiB066
Cp4.1LG10g00080Bottle gourd (USVL1VR-Ls)cpelsiB069
Cp4.1LG10g00080Watermelon (Charleston Gray)cpewcgB059
Cp4.1LG10g00080Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g00080Watermelon (97103) v1cpewmB063
Cp4.1LG10g00080Watermelon (97103) v1cpewmB073
Cp4.1LG10g00080Melon (DHL92) v3.5.1cpemeB058
Cp4.1LG10g00080Melon (DHL92) v3.5.1cpemeB060
Cp4.1LG10g00080Cucumber (Gy14) v2cgybcpeB295
Cp4.1LG10g00080Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g00080Melon (DHL92) v3.6.1cpemedB061
Cp4.1LG10g00080Melon (DHL92) v3.6.1cpemedB076
Cp4.1LG10g00080Melon (DHL92) v3.6.1cpemedB080
Cp4.1LG10g00080Silver-seed gourdcarcpeB0554
Cp4.1LG10g00080Silver-seed gourdcarcpeB0482
Cp4.1LG10g00080Silver-seed gourdcarcpeB0913
Cp4.1LG10g00080Silver-seed gourdcarcpeB1350
Cp4.1LG10g00080Cucumber (Chinese Long) v3cpecucB0063
Cp4.1LG10g00080Cucumber (Chinese Long) v3cpecucB0074
Cp4.1LG10g00080Cucumber (Chinese Long) v3cpecucB0092