Cp4.1LG09g10150 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g10150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLRR receptor-like serine/threonine-protein kinase GSO1
LocationCp4.1LG09 : 8975125 .. 8978407 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGCATTCAGGAGAGATTTCCTGGTTATTTTTGCTGCATCACTGCAACTCCTAATGATCTCATAAGATCTAAAAGCCAACATATCATCATCCCTTTCATTTTTCTTGCCTTGTTCTTGAATGCTGGTTGCTTCATATCTTTTATATGATCATTCCAGCTGAACCATGGCTAACGGTTACGTGCCGAGGCTCCATCTCCTTCTCCTTCTCCTTTTCTCCGTTCTTGGCGTTTACCTCGACGTGGCTCGGGGACGGGTTTCGACACCTTCTAACTGGCTTCTGAAAATGAAATCAGAACAGGTTGATCCTGTTGGAATCCTTGATAACTGGTCTCCAAGCACTCATGTATGTACCTGGCATGGCATTTCTTGTTCACATGATATGTTCCATATTGTTAGTTTAAACCTTTCTGGCTCTGGATTATCAGGTTCTATGTGGAGTGAGTTATGGCATATCACTTCACTTGAAGTCTTAGATTTGTCTTCAAATTCTCTCTCTGGTTCAATACCCTCTGAGTTTGGGCAGCTTTTCAATCTAAGGATGCTGTTCTTGCATTCAAATAACCTGTCTGGCAAGCTTCCAGCTGAAATAGGCCTTTTGAAGAACTTGCATGCTCTCAAAATAGGCAACAACATGCTATCAGGTGATATCACACCATTTATTGGAAACTTGACCAATTTGAGTGTTCTTGGTCTTGGCTACTGTGAATTCAATGGAAGTATTCCAGTTGAGATAGGAACCTTGAAGCATCTGATATCACTTGATTTGCAGCAGAACAAGCTCAGTGGTTCTATTCCCGACAGCATTTTCGGAATCGAAGAGCTCGAAAACTTGGTCGTATCGAATAACATGCTTGATGGAAACATTCCTAGCTCACTAGCCTCATTAAGATCATTGAAAGTTTTGAATTTAGCTAACAACAGCTTTTCTGGATCAATTCCTGTTGCATTAAGTGATCTTACCAATTTGGTGTACTTGAACTTGCTTGGAAATAGATTCAATGGAGAAATCCCTTCTGAGATAAACAAATTGGTTCTTCTTGAAAATGTAGATTTGTCAAGAAACAACCTTTCTGGAGCTGTAAGTCTACTGAATTCTCAGCTGAAGAATCTTAAAACTCTTGTCTTGTCGGATAATGCTTTAACAGGTAACATTCCCGACAATTTCTGCTTTGAAAATTCAAATCTTCAACAGATATTTCTTGCCAGGAACAAGCTTTCCGGCAGGTTCCCAATCGAGCTGCTAAACTGTTCTTCACTACAGCAGCTGGATCTTTCTGGTAACGGATTCGAAGGCGATCTCCCGTCGACTCTCGACGATCTTAACTACTTAACCGATCTTTTACTCAACAGCAACAGCTTCACTGGATCCATCCCCCCTCAAATTGGAAACATGAGCTCGTTGGAGGAGGTGTATCTGTTTGACAACAAGCTCACAGGAGACATTCCAAAGGAGATAGGGAAGCTACAGAAGTTGAGTATCATTTTCCTCTATGATAACCAAATGTCGGGTAGCATACCGAACGAGCTTACGAACTGCACGAGTTTGACCGAGATCGATTTCTATGGCAATCATTTTACAGGCCCCATTCCTAAGGATATTGGCAGCTTAAAAAACCTGGCTGTGCTTCATTTAAGGCAGAATTTCTTGTGGGGTCCTGTCCCAAAAAGTTTAGGGTACTGCAAAAGCCTTAAGTTATTAGCTTTGGCTGACAACAATCTCTCAGGGTCATTACCCTCCAGTTTAGGACAACTCTCAGAATTAAGCACCATTACCCTTTATAACAACTCCCTTGAAGGCCCTCTTCCTTTGTCATTCTCCATTCTTAAAAGCCTTAAGATAATCAACTTCTCCAATAATAAGTTCAATGGAACCATCTTTCCTCTCACTGGCTTGGTTTCTTTAACAGCATTGGATTTGACAAACAACAGCTTTTCAGGTCCTATTCCTTCCAGATTGTCTAGAAACTTGAGACGTCTTCGCCTCGCTCACAACGAGCTCACCGGTTATGTTCCATCCGAGCTCGGCGAACTGACAGAGCTAAACTTTCTGGATTTGTCACACAACAATCTCACAGGAGAATTGTCAGCTCAGCTCTTTAACTGTAGCAAGCTTCAGCACTTTTTGGTTAACGACAACAAACTGACAGGAACCATCACTCCATTGATAGGGAACTTACAAGAACTTGGCGAGCTGGATTTGTCATCCAATAACTTGTATGGGGAAATACCTGCAGAATTGGTAACCTGTCACAGATTACTTAAGCTATCTCTCCATAACAACAATTTATCAGGAAAAATCCCACAGGACATTGGAAATCTCACGTTTCTATATGTTCTTAACCTTCAAAGAAACAATCTTTCAGGTCCTATTCCATCAACAATCCAAAAATGCAGCAAACTTTATGAGCTGAGACTCTCTGAAAACCTCTTGACATCTGATATCCCTCAAGAACTTGGAGGGCTGCATGAACTACAAGTGATACTAGATTTAAGCAAAAATCGCTTATCTGGTGAAATCCCATCATCCATTGGAGATTTAATGAAGCTTGAGAGATTGGATCTTTCTTCAAATCATCTCAGAGGGGAAATTCCTAGCTCACTTGAAAAACTAACAAGTATGCATATTCTTAACCTGTCACATAATCAGCTACAAGGTTCAATCCCTCAATGTTTTTCAGGGTTTCCATTGAGTTCCTTCAAGGATAATGATGAACTCTGTGGCTCACCTCTGCTATCATGTTCATCAAGGCAAGAAACAAGCAAGCTATCCAAGGCTGCAGTGATTGGTATTATTGTGGCTATTGTTTTTACCTCCATGGTTATATGTCTAATAATGATGTATATTATGCTGAGAATGTGGAGTAACTGGAGAAATGTTTCGGTTTCGATATCGGATGGCGGTGGAAACGAACACGAGAGAGATGAAGTCAGATGGGTTCATGGAAATGACAAGAAGGTAGGACAGTATTGGAAGGTTGATTCTGTGGCGTTGGTTCGTTCTAAGGCTAGTAGGTGTGTTTTTCAACTCAAGGAAGATTCAGAGTGAATGTGGCTTGTAGAGCTCTCATGAAACATCAAGGCTTGATGAGATTATTTGTTGCTGATGATTTTTTTTTTTTTTGAACTGTGTTAGTGATGAAGTTTGGTGTCTTGAGGATTGTAAAAATAAACTGGAGATCTTTGTAGATAATTGCCTAGTGTATGATTAGTGTTGAGAATTGATATCTGTTCAACAAGTGTCCAGGTTGTATCTGAAATTTCAATATCTATTGTGCTAACTC

mRNA sequence

TGAGCATTCAGGAGAGATTTCCTGGTTATTTTTGCTGCATCACTGCAACTCCTAATGATCTCATAAGATCTAAAAGCCAACATATCATCATCCCTTTCATTTTTCTTGCCTTGTTCTTGAATGCTGGTTGCTTCATATCTTTTATATGATCATTCCAGCTGAACCATGGCTAACGGTTACGTGCCGAGGCTCCATCTCCTTCTCCTTCTCCTTTTCTCCGTTCTTGGCGTTTACCTCGACGTGGCTCGGGGACGGGTTTCGACACCTTCTAACTGGCTTCTGAAAATGAAATCAGAACAGGTTGATCCTGTTGGAATCCTTGATAACTGGTCTCCAAGCACTCATGTTCTATGTGGAGTGAGTTATGGCATATCACTTCACTTGAAGTCTTAGATTTGTCTTCAAATTCTCTCTCTGGTTCAATACCCTCTGAGTTTGGGCAGCTTTTCAATCTAAGGATGCTGTTCTTGCATTCAAATAACCTGTCTGGCAAGCTTCCAGCTGAAATAGGCCTTTTGAAGAACTTGCATGCTCTCAAAATAGGCAACAACATGCTATCAGGTGATATCACACCATTTATTGGAAACTTGACCAATTTGAGTGTTCTTGGTCTTGGCTACTGTGAATTCAATGGAAGTATTCCAGTTGAGATAGGAACCTTGAAGCATCTGATATCACTTGATTTGCAGCAGAACAAGCTCAGTGGTTCTATTCCCGACAGCATTTTCGGAATCGAAGAGCTCGAAAACTTGGTCGTATCGAATAACATGCTTGATGGAAACATTCCTAGCTCACTAGCCTCATTAAGATCATTGAAAGTTTTGAATTTAGCTAACAACAGCTTTTCTGGATCAATTCCTGTTGCATTAAGTGATCTTACCAATTTGGTGTACTTGAACTTGCTTGGAAATAGATTCAATGGAGAAATCCCTTCTGAGATAAACAAATTGGTTCTTCTTGAAAATGTAGATTTGTCAAGAAACAACCTTTCTGGAGCTGTAAGTCTACTGAATTCTCAGCTGAAGAATCTTAAAACTCTTGTCTTGTCGGATAATGCTTTAACAGGTAACATTCCCGACAATTTCTGCTTTGAAAATTCAAATCTTCAACAGATATTTCTTGCCAGGAACAAGCTTTCCGGCAGGTTCCCAATCGAGCTGCTAAACTGTTCTTCACTACAGCAGCTGGATCTTTCTGGTAACGGATTCGAAGGCGATCTCCCGTCGACTCTCGACGATCTTAACTACTTAACCGATCTTTTACTCAACAGCAACAGCTTCACTGGATCCATCCCCCCTCAAATTGGAAACATGAGCTCGTTGGAGGAGGTGTATCTGTTTGACAACAAGCTCACAGGAGACATTCCAAAGGAGATAGGGAAGCTACAGAAGTTGAGTATCATTTTCCTCTATGATAACCAAATGTCGGGTAGCATACCGAACGAGCTTACGAACTGCACGAGTTTGACCGAGATCGATTTCTATGGCAATCATTTTACAGGCCCCATTCCTAAGGATATTGGCAGCTTAAAAAACCTGGCTGTGCTTCATTTAAGGCAGAATTTCTTGTGGGGTCCTGTCCCAAAAAGTTTAGGGTACTGCAAAAGCCTTAAGTTATTAGCTTTGGCTGACAACAATCTCTCAGGGTCATTACCCTCCAGTTTAGGACAACTCTCAGAATTAAGCACCATTACCCTTTATAACAACTCCCTTGAAGGCCCTCTTCCTTTGTCATTCTCCATTCTTAAAAGCCTTAAGATAATCAACTTCTCCAATAATAAGTTCAATGGAACCATCTTTCCTCTCACTGGCTTGGTTTCTTTAACAGCATTGGATTTGACAAACAACAGCTTTTCAGGTCCTATTCCTTCCAGATTGTCTAGAAACTTGAGACGTCTTCGCCTCGCTCACAACGAGCTCACCGGTTATGTTCCATCCGAGCTCGGCGAACTGACAGAGCTAAACTTTCTGGATTTGTCACACAACAATCTCACAGGAGAATTGTCAGCTCAGCTCTTTAACTGTAGCAAGCTTCAGCACTTTTTGGTTAACGACAACAAACTGACAGGAACCATCACTCCATTGATAGGGAACTTACAAGAACTTGGCGAGCTGGATTTGTCATCCAATAACTTGTATGGGGAAATACCTGCAGAATTGGTAACCTGTCACAGATTACTTAAGCTATCTCTCCATAACAACAATTTATCAGGAAAAATCCCACAGGACATTGGAAATCTCACGTTTCTATATGTTCTTAACCTTCAAAGAAACAATCTTTCAGGTCCTATTCCATCAACAATCCAAAAATGCAGCAAACTTTATGAGCTGAGACTCTCTGAAAACCTCTTGACATCTGATATCCCTCAAGAACTTGGAGGGCTGCATGAACTACAAGTGATACTAGATTTAAGCAAAAATCGCTTATCTGGTGAAATCCCATCATCCATTGGAGATTTAATGAAGCTTGAGAGATTGGATCTTTCTTCAAATCATCTCAGAGGGGAAATTCCTAGCTCACTTGAAAAACTAACAAGTATGCATATTCTTAACCTGTCACATAATCAGCTACAAGGTTCAATCCCTCAATGTTTTTCAGGGTTTCCATTGAGTTCCTTCAAGGATAATGATGAACTCTGTGGCTCACCTCTGCTATCATGTTCATCAAGGCAAGAAACAAGCAAGCTATCCAAGGCTGCAGTGATTGGTATTATTGTGGCTATTGTTTTTACCTCCATGGTTATATGTCTAATAATGATGTATATTATGCTGAGAATGTGGAGTAACTGGAGAAATGTTTCGGTTTCGATATCGGATGGCGGTGGAAACGAACACGAGAGAGATGAAGTCAGATGGGTTCATGGAAATGACAAGAAGGTAGGACAGTATTGGAAGGTTGATTCTGTGGCGTTGGTTCGTTCTAAGGCTAGTAGGTGTGTTTTTCAACTCAAGGAAGATTCAGAGTGAATGTGGCTTGTAGAGCTCTCATGAAACATCAAGGCTTGATGAGATTATTTGTTGCTGATGATTTTTTTTTTTTTTGAACTGTGTTAGTGATGAAGTTTGGTGTCTTGAGGATTGTAAAAATAAACTGGAGATCTTTGTAGATAATTGCCTAGTGTATGATTAGTGTTGAGAATTGATATCTGTTCAACAAGTGTCCAGGTTGTATCTGAAATTTCAATATCTATTGTGCTAACTC

Coding sequence (CDS)

ATGGCTAACGGTTACGTGCCGAGGCTCCATCTCCTTCTCCTTCTCCTTTTCTCCGTTCTTGGCGTTTACCTCGACGTGGCTCGGGGACGGGTTTCGACACCTTCTAACTGGCTTCTGAAAATGAAATCAGAACAGGTTGATCCTGTTGGAATCCTTGATAACTGGTCTCCAAGCACTCATGTTCTATGTGGAGTGAGTTATGGCATATCACTTCACTTGAAGTCTTAG

Protein sequence

MANGYVPRLHLLLLLLFSVLGVYLDVARGRVSTPSNWLLKMKSEQVDPVGILDNWSPSTHVLCGVSYGISLHLKS
Homology
[Close]
BLAST of Cp4.1LG09g10150 vs. TrEMBL
Match: A0A0A0LTJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046210 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-09
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 1 

Query: 1  MANGYVPRLHLLLLLLFS-VLGVYLDVARGRVSTPSNWLLKMKSEQVDPVGILDNWSPST 60
          MA  Y  R  L   +LF  +L V L +ARG+  T S+WLLK+KSE VDPVG+L+NWSPS 
Sbjct: 1  MAGTYTLRFILFFFILFFFILSVLLAMARGQAPTNSDWLLKIKSELVDPVGVLENWSPSV 60

Query: 61 HV 62
          HV
Sbjct: 61 HV 62

[Close]
BLAST of Cp4.1LG09g10150 vs. NCBI nr
Match: gi|659067280|ref|XP_008438602.1| (PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-10
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 1 

Query: 1  MANGYVPRLHLLLLLLFSVLGVYLDVARGRVSTPSNWLLKMKSEQVDPVGILDNWSPSTH 60
          MA  Y  R HL     F +L V L VARG+  T S+WLLK+KSE VDPVG+L+NWSPS H
Sbjct: 1  MAGIYTLRFHLF----FFILSVLLAVARGQTPTDSDWLLKIKSELVDPVGVLENWSPSVH 57

Query: 61 V 62
          V
Sbjct: 61 V 57

[Close]
BLAST of Cp4.1LG09g10150 vs. NCBI nr
Match: gi|449469707|ref|XP_004152560.1| (PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-09
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 1 

Query: 1  MANGYVPRLHLLLLLLFS-VLGVYLDVARGRVSTPSNWLLKMKSEQVDPVGILDNWSPST 60
          MA  Y  R  L   +LF  +L V L +ARG+  T S+WLLK+KSE VDPVG+L+NWSPS 
Sbjct: 1  MAGTYTLRFILFFFILFFFILSVLLAMARGQAPTNSDWLLKIKSELVDPVGVLENWSPSV 60

Query: 61 HV 62
          HV
Sbjct: 61 HV 62

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g10150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g10150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTJ7_CUCSA1.7e-0956.45Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046210 PE=4 SV=1[more]
BLAST of Cp4.1LG09g10150 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g10150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067280|ref|XP_008438602.1|3.8e-1059.02PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Cucumis melo][more]
gi|449469707|ref|XP_004152560.1|2.5e-0956.45PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Cucumis sativ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g10150.1Cp4.1LG09g10150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g10150MELO3C002280.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g10150Bhi08G001328Wax gourdcpewgoB0046
Cp4.1LG09g10150CsGy1G008520Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g10150Carg06736Silver-seed gourdcarcpeB0694
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g10150Wax gourdcpewgoB0024
Cp4.1LG09g10150Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g10150Cucurbita pepo (Zucchini)cpecpeB028
Cp4.1LG09g10150Cucurbita pepo (Zucchini)cpecpeB045
Cp4.1LG09g10150Cucurbita pepo (Zucchini)cpecpeB049
Cp4.1LG09g10150Cucurbita pepo (Zucchini)cpecpeB055
Cp4.1LG09g10150Cucumber (Gy14) v1cgycpeB0201
Cp4.1LG09g10150Cucumber (Gy14) v1cgycpeB0553
Cp4.1LG09g10150Cucurbita maxima (Rimu)cmacpeB071
Cp4.1LG09g10150Cucurbita maxima (Rimu)cmacpeB213
Cp4.1LG09g10150Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g10150Cucurbita maxima (Rimu)cmacpeB416
Cp4.1LG09g10150Cucurbita moschata (Rifu)cmocpeB043
Cp4.1LG09g10150Cucurbita moschata (Rifu)cmocpeB082
Cp4.1LG09g10150Cucurbita moschata (Rifu)cmocpeB183
Cp4.1LG09g10150Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g10150Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g10150Wild cucumber (PI 183967)cpecpiB020
Cp4.1LG09g10150Cucumber (Chinese Long) v2cpecuB025
Cp4.1LG09g10150Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g10150Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g10150Bottle gourd (USVL1VR-Ls)cpelsiB042
Cp4.1LG09g10150Watermelon (Charleston Gray)cpewcgB026
Cp4.1LG09g10150Watermelon (Charleston Gray)cpewcgB050
Cp4.1LG09g10150Watermelon (97103) v1cpewmB033
Cp4.1LG09g10150Watermelon (97103) v1cpewmB060
Cp4.1LG09g10150Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g10150Melon (DHL92) v3.5.1cpemeB035
Cp4.1LG09g10150Cucumber (Gy14) v2cgybcpeB012
Cp4.1LG09g10150Melon (DHL92) v3.6.1cpemedB022
Cp4.1LG09g10150Melon (DHL92) v3.6.1cpemedB040
Cp4.1LG09g10150Silver-seed gourdcarcpeB0363
Cp4.1LG09g10150Silver-seed gourdcarcpeB0506
Cp4.1LG09g10150Silver-seed gourdcarcpeB1394
Cp4.1LG09g10150Silver-seed gourdcarcpeB1396
Cp4.1LG09g10150Cucumber (Chinese Long) v3cpecucB0023
Cp4.1LG09g10150Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g10150Cucumber (Chinese Long) v3cpecucB0049