Cp4.1LG09g09120 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCGGCCAAACGACATGTCGTCCGATGTTTCACGTAGATTAAAACGACGATTGAATCGGAACTCGAAGCGGCAAAAATCGAGCAAATCGTTGATGTTTCAATCAATAGCACATTCACTATCTTTCTCAAGCGCCCGCTTTCTTCATCGCTCGGTGATTAATCGTCGAACGATTTGCAGTCTATCTGTGTCGATGTCTAGTTGGTCCTGCAAAAAATGCACATTCCTCAACCCACCTTCCCAAAAGGCAGCCTGCAAAATCTGTCTATCTCCTTCATCGCCACCGCCATCACCGTCTTCTTCCTCCGCCCCTCAATGGTCCTGCAAGGCCTGCACCTTCCTGAACCCATATAAGAATTCCGATTGCGAACTCTGTGGCACTAGGGCTCCGTCCCTCTCGCTTTCGAGTTTCAAGGATTTGATCGATGTCAGCGAGGATGCGGATGCGGATTCTTCTGTTGGGTCTGTGTTCTTTCCCTTGCAGCCCTGCAAGAAAAGGAAACTAGACGATCCTGTTCCTGTGGTGGGTGGTGACAATTTCGCTGAATTGGGCGCATTTCGTGGCATTAAGGCATCGACTAACACTATTGCTGAAATGGGTTAGTCTTATTGTGTTGATTTTGTGTGTCAATATTATCGTTTTTTCAAGAACAATGTAGTTTGAAGTTGTATTAATGGGTTAGTCTTATTGTGTTGATGGGTGGCAGGGGATTCTAGTTCTAGGACAAGTTTGACACCCATAAAGATTTTGACTTACAATGTATGGTTCCGAGAAGATTTGGAGATGCGTAATAGAATGAGAGCCCTTGGACAACTTATCCAACGGCATTCACCAGATGTTATTTGTTTCCAGGTACTCCCTCAGTTTCATACACGTGTTGTGTGAGAGGAAGGAACCATTCCTTATAACAATGTGGAAAACTCTCCTACACTCTCTCTAGTAGACTCGTTTTAAAATTGTGAGGCTGACGGCCATACGTAACGGGCCAAAATGGACAATATTTACTAGCGGTGCACTTGAGCTGTTACAAATGGTATCAGACCCGGACACTGGATTGTGTGCCAACGAAGATGTTGGGCTCTCAAGGGGTGGATTGTGAGATCCCACTTGGAGAGGGGGAAGGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAATGCGTTTTAAACCGTGAGACTGACGACGATACGTAACGGGCCAAAACAGACAATATTTGCTAGTGGTGGACTTAGGCGATTACAAATGGTATCAGAGCCAGATACCGGGTGGTGTGCCAATGAGGGGGTGGATTGTGAGATCTCACCTGGAGAGGGGAACGAACCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCATACGCGTTTTAAAACCGTGAGGTTGACGGCGATACGTAACGGGTCAAAACGAACAATATTTGCTAGCGGTGGACTTGAGCCGTTACATTTTGAGTTTCTAGAATTTTGGTTCGTGATGCATTCTTTTACGTTTACAATGTGTTGCAGGAAGTTACTCCAGATATATATAACATCTTCCAGATTACCAATTGGTGGAAAGTTTATCGCTGCTCGGTCAAGAAGGATGCTCATTCAAGGGGATACTTTTGTATGCTGGTGAGCTTTTTGTTACCTCCTTTGCTTGATATTTCATTTCCTACACAAATGAAAGCATATTTTGGCTTCTGGGTGAAGTATAGTTTTTATAATGGATATGGTTGATGAAATGATGTCAAATTGACTCCCCCACGAAACTAGCAAAGATAGCCCTTCCAGCCAACAACCCAAGTCCACCGCTAGCTAATAATGTCTGTTTTTAGCTCGTTACGTATCGTCGTCAACCTCACGATTCTAAAACGCATTTGTTAGGGAGAAGTTTCCACATCCTAATAACGAATGCTTCGTTCACCTCTCCAACCGATGTGGGATCTCACAATCCAACCCCTTTGGGGCCTAGCGTTCTCGCTAGCACACTGCCCGATGTTTGGCTCTGATACCATTTGTAATAGCCTAAGCCCACTACTAGCATATATTGTCTGTCTGGGCTCGTTATGTATCGCCGTTAGCCTCACAATTTTAAAACACGTATGTTAGGGAGAGGTTTCCACACCCTAATAAGAAATACTTCGTTCACCTCTCCAACCGATATGGGATCTCACAATCCTCCCCCCTTGGAGCCAGCATCCTCGTTGGCACATCACCTGGTGTTTGGCTCTGATACCATTTGTAACAGCCCAAGCGCACCACTAGCATATATTGTCTATCTTGGCCCGTTATGTATCGCTGTTAGCCTTACGGTTTTAAAACGCGTCTGTTAGGGTGAGGTTTCCACACCCTAATAAGAAACACTTCGTTCACCTCTCCAACCGATGTGGGATTTCACAATCCACCCCTCTTGGGGCCCAACGTCCGGCTCTGATACCATTTGTAACAGCCCAAGCCCACTACTAGCATATATTGTCTGTCTTGGCCCATTACATATCACCGTTAGCTTCACAGTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCACATCCTAATAAGGAATGCTTTGTTCACATCTCCAACGGATGTGAGATCTCACAATTACAAAAGCTAGCATTCTCAACGGCCACAGCAGCCCTTTTCAAAATCCGTAGAGTATAAGCATAGGTTTTGTGTACTGTTATACATATCTTCTAATCTTATCCTCGTTCTAGTTCTTATGTCGTCTGCACAGAACGGTAGAATACGAGAGTGGTGAACCTGTTATTTCTCTAGAACTATGCTTCATTTCAGCGTTTTGCATCATAAACTGATGATATAATTTATCCATTTACTGAGCAGTTGAGCAAACTGCCGGTGAAATCCTTCAGTTGTCAACCATTTTCCAATTCCATAATGGGGAGAGAACTCTGCGTTGCCAATCTTGAAGTTCAAAATGGCCTTTCATTGACAGTAGCAACAAGCCATCTTGAGAGTCCTTGCCCTGCACCTCCAAAGTGGAATCAAATGTACAGCAAAGAGCGTGTAATTCAAGCCAAAGAAGCCATCGACTTTCTCAAGGAAAATCCGAACGTCGTTTTTGGCGGTGACATGAACTGGGACGATAAGTCGGATGGTCAGTTTCCTTTTCCCGACGACTGGATTGATGCCTGGGAAGAATTACGCCCCGGTGAAAATGGTTGGACATACGATACCAAATCGAACAAGATGTTATCTGGGAACCGTACGCTGCAAAGGCGTCTGGATCGATTCGTTTGTAAGTTACAAGATTTCAAGGTAAGTTCCATTGTAATGATTGGGACTGATCCAATTCCTGAATTAACATACACAAAGGAGAAGAAAGTAGGTAAAGAAATGAAGATGCTTGAGCTCCCTGTTTTGCCCAGTGATCATTATGGCCTGCTGTTGACAATTAGCAGCCTGTAATCTGATGTTTTTTTAGTTAGTTTTGTGTGGTGGAAGCCTGCTGGAATCGTTTTTTTGTTCATTTGCAGTGCTTAAAAATGCATGCTTCATGGTATGCGATTTTGTATGTAGCTTAGAACCAAACAATGGTTCCCAAGATCTTGGATGGTTCCCAGCATCAGTGTATCTAAACTCATATGCTAAATCTTGAACTGCTCCTTTGTTCCATGTCTGCTCGTTTTGCCCATTTTGAGATATGGATTGTTGCCTAACAAATGAGTGAAATTTGACCCG TATCGGCCAAACGACATGTCGTCCGATGTTTCACGTAGATTAAAACGACGATTGAATCGGAACTCGAAGCGGCAAAAATCGAGCAAATCGTTGATGTTTCAATCAATAGCACATTCACTATCTTTCTCAAGCGCCCGCTTTCTTCATCGCTCGGTGATTAATCGTCGAACGATTTGCAGTCTATCTGTGTCGATGTCTAGTTGGTCCTGCAAAAAATGCACATTCCTCAACCCACCTTCCCAAAAGGCAGCCTGCAAAATCTGTCTATCTCCTTCATCGCCACCGCCATCACCGTCTTCTTCCTCCGCCCCTCAATGGTCCTGCAAGGCCTGCACCTTCCTGAACCCATATAAGAATTCCGATTGCGAACTCTGTGGCACTAGGGCTCCGTCCCTCTCGCTTTCGAGTTTCAAGGATTTGATCGATGTCAGCGAGGATGCGGATGCGGATTCTTCTGTTGGGTCTGTGTTCTTTCCCTTGCAGCCCTGCAAGAAAAGGAAACTAGACGATCCTGTTCCTGTGGTGGGTGGTGACAATTTCGCTGAATTGGGCGCATTTCGTGGCATTAAGGCATCGACTAACACTATTGCTGAAATGGGGGATTCTAGTTCTAGGACAAGTTTGACACCCATAAAGATTTTGACTTACAATGAAGTTACTCCAGATATATATAACATCTTCCAGATTACCAATTGGTGGAAAGTTTATCGCTGCTCGGTCAAGAAGGATGCTCATTCAAGGGGATACTTTTGTATGCTGTTGAGCAAACTGCCGGTGAAATCCTTCAGTTGTCAACCATTTTCCAATTCCATAATGGGGAGAGAACTCTGCGTTGCCAATCTTGAAGTTCAAAATGGCCTTTCATTGACAGTAGCAACAAGCCATCTTGAGAGTCCTTGCCCTGCACCTCCAAAGTGGAATCAAATGTACAGCAAAGAGCGTGTAATTCAAGCCAAAGAAGCCATCGACTTTCTCAAGGAAAATCCGAACGTCGTTTTTGGCGGTGACATGAACTGGGACGATAAGTCGGATGGTCAGTTTCCTTTTCCCGACGACTGGATTGATGCCTGGGAAGAATTACGCCCCGGTGAAAATGGTTGGACATACGATACCAAATCGAACAAGATGTTATCTGGGAACCGTACGCTGCAAAGGCGTCTGGATCGATTCGTTTGTAAGTTACAAGATTTCAAGGTAAGTTCCATTGTAATGATTGGGACTGATCCAATTCCTGAATTAACATACACAAAGGAGAAGAAAGTAGGTAAAGAAATGAAGATGCTTGAGCTCCCTGTTTTGCCCAGTGATCATTATGGCCTGCTGTTGACAATTAGCAGCCTGTAATCTGATGTTTTTTTAGTTAGTTTTGTGTGGTGGAAGCCTGCTGGAATCGTTTTTTTGTTCATTTGCAGTGCTTAAAAATGCATGCTTCATGGTATGCGATTTTGTATGTAGCTTAGAACCAAACAATGGTTCCCAAGATCTTGGATGGTTCCCAGCATCAGTGTATCTAAACTCATATGCTAAATCTTGAACTGCTCCTTTGTTCCATGTCTGCTCGTTTTGCCCATTTTGAGATATGGATTGTTGCCTAACAAATGAGTGAAATTTGACCCG ATGTCGTCCGATGTTTCACGTAGATTAAAACGACGATTGAATCGGAACTCGAAGCGGCAAAAATCGAGCAAATCGTTGATGTTTCAATCAATAGCACATTCACTATCTTTCTCAAGCGCCCGCTTTCTTCATCGCTCGGTGATTAATCGTCGAACGATTTGCAGTCTATCTGTGTCGATGTCTAGTTGGTCCTGCAAAAAATGCACATTCCTCAACCCACCTTCCCAAAAGGCAGCCTGCAAAATCTGTCTATCTCCTTCATCGCCACCGCCATCACCGTCTTCTTCCTCCGCCCCTCAATGGTCCTGCAAGGCCTGCACCTTCCTGAACCCATATAAGAATTCCGATTGCGAACTCTGTGGCACTAGGGCTCCGTCCCTCTCGCTTTCGAGTTTCAAGGATTTGATCGATGTCAGCGAGGATGCGGATGCGGATTCTTCTGTTGGGTCTGTGTTCTTTCCCTTGCAGCCCTGCAAGAAAAGGAAACTAGACGATCCTGTTCCTGTGGTGGGTGGTGACAATTTCGCTGAATTGGGCGCATTTCGTGGCATTAAGGCATCGACTAACACTATTGCTGAAATGGGGGATTCTAGTTCTAGGACAAGTTTGACACCCATAAAGATTTTGACTTACAATGAAGTTACTCCAGATATATATAACATCTTCCAGATTACCAATTGGTGGAAAGTTTATCGCTGCTCGGTCAAGAAGGATGCTCATTCAAGGGGATACTTTTGTATGCTGTTGAGCAAACTGCCGGTGAAATCCTTCAGTTGTCAACCATTTTCCAATTCCATAATGGGGAGAGAACTCTGCGTTGCCAATCTTGAAGTTCAAAATGGCCTTTCATTGACAGTAGCAACAAGCCATCTTGAGAGTCCTTGCCCTGCACCTCCAAAGTGGAATCAAATGTACAGCAAAGAGCGTGTAATTCAAGCCAAAGAAGCCATCGACTTTCTCAAGGAAAATCCGAACGTCGTTTTTGGCGGTGACATGAACTGGGACGATAAGTCGGATGGTCAGTTTCCTTTTCCCGACGACTGGATTGATGCCTGGGAAGAATTACGCCCCGGTGAAAATGGTTGGACATACGATACCAAATCGAACAAGATGTTATCTGGGAACCGTACGCTGCAAAGGCGTCTGGATCGATTCGTTTGTAAGTTACAAGATTTCAAGGTAAGTTCCATTGTAATGATTGGGACTGATCCAATTCCTGAATTAACATACACAAAGGAGAAGAAAGTAGGTAAAGAAATGAAGATGCTTGAGCTCCCTGTTTTGCCCAGTGATCATTATGGCCTGCTGTTGACAATTAGCAGCCTGTAA MSSDVSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWSCKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKASTNTIAEMGDSSSRTSLTPIKILTYNEVTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL
BLAST of Cp4.1LG09g09120 vs. TrEMBL
Match: E5GC61_CUCME (Endonuclease/exonuclease/phosphatase family protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 692.2 bits (1785), Expect = 4.1e-196 Identity = 353/468 (75.43%), Postives = 385/468 (82.26%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. TrEMBL
Match: A0A0A0LRJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062360 PE=4 SV=1) HSP 1 Score: 643.3 bits (1658), Expect = 2.2e-181 Identity = 315/415 (75.90%), Postives = 343/415 (82.65%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. TrEMBL
Match: A0A061GNQ8_THECC (Endonuclease/exonuclease/phosphatase family protein OS=Theobroma cacao GN=TCM_030246 PE=4 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 2.2e-144 Identity = 267/419 (63.72%), Postives = 306/419 (73.03%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. TrEMBL
Match: B9NBH8_POPTR (Endonuclease/exonuclease/phosphatase family protein OS=Populus trichocarpa GN=POPTR_0004s01100g PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 4.2e-140 Identity = 259/421 (61.52%), Postives = 300/421 (71.26%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. TrEMBL
Match: V4UKW6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014440mg PE=3 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 2.6e-137 Identity = 255/403 (63.28%), Postives = 297/403 (73.70%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. TAIR10
Match: AT1G11800.1 (AT1G11800.1 endonuclease/exonuclease/phosphatase family protein) HSP 1 Score: 441.4 bits (1134), Expect = 6.4e-124 Identity = 240/433 (55.43%), Postives = 293/433 (67.67%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. NCBI nr
Match: gi|659067716|ref|XP_008440936.1| (PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Cucumis melo]) HSP 1 Score: 692.2 bits (1785), Expect = 5.9e-196 Identity = 353/468 (75.43%), Postives = 385/468 (82.26%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. NCBI nr
Match: gi|778658383|ref|XP_011652618.1| (PREDICTED: uncharacterized protein LOC101210372 [Cucumis sativus]) HSP 1 Score: 660.6 bits (1703), Expect = 1.9e-186 Identity = 336/462 (72.73%), Postives = 371/462 (80.30%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. NCBI nr
Match: gi|700209414|gb|KGN64510.1| (hypothetical protein Csa_1G062360 [Cucumis sativus]) HSP 1 Score: 643.3 bits (1658), Expect = 3.2e-181 Identity = 315/415 (75.90%), Postives = 343/415 (82.65%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. NCBI nr
Match: gi|1009108257|ref|XP_015883817.1| (PREDICTED: uncharacterized protein LOC107419591 [Ziziphus jujuba]) HSP 1 Score: 526.2 bits (1354), Expect = 5.6e-146 Identity = 275/463 (59.40%), Postives = 328/463 (70.84%), Query Frame = 1
BLAST of Cp4.1LG09g09120 vs. NCBI nr
Match: gi|590626219|ref|XP_007026107.1| (Endonuclease/exonuclease/phosphatase family protein [Theobroma cacao]) HSP 1 Score: 520.4 bits (1339), Expect = 3.1e-144 Identity = 267/419 (63.72%), Postives = 306/419 (73.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |