Cp4.1LG09g09050 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTryptophan synthase beta chain, putative
LocationCp4.1LG09 : 8152633 .. 8157114 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCGTGTTCACGTTCCCATGAAATTGACATCTACTCTTCTTTGCCAACCCTAATTTTCTAGGGAAAATGAATTAAGTGGATTTGGTACTAATTTATTAAAGACTTCAATATCAACGTTAGCCAAACTAAGAACGAAATTGATTATTAAAAAAAATTATTTAATTTCAGTGAGTACGAATTGTTTAATAAGAACGTCATAATGTAACTGTCTCTTAATAATCGTCGGAGGTAGATCCAAAAATATATTTATTATTTAATAATTATTAGTTATAAAAGTGAAATATTTTTACCATTTATCTTTTATTCATCGAGCTATCAATCATATAATAGCTTTGCTTTCGAATAACCTTGAGCCATATTGGACCAAACAACTATTTGTTGCGTATCTAATTTCTATAGCTATTACTTTTCCCTTTTTTTTTCCTTGCAAAACATGTGCAATAAGATGAATCAATTCACTCTCTATATAAACAACCCTTGTGTGCCTCTCTTAACACAAACCACTCAACTCCCTCCCTCTCTCTCTCTCTCAATTGTTAATACTCAAAGGGAAGAACATACCTAGAAATGGCATCCAATATTGTGCACAACATTGCTGCTGCTGTCACTAACCAATTAGATGCAACCACAGGCATAGCCAGGTCGCATGTAAAGCTTGGCAACGGAATTGGGTCACCCACTTTCACGCCAACAAGGAAGCCTACGCCAGCATTAAAGATGCAGCCTGTAATTGATGATCACCCCAAGAACTCTAAACAAACAATTCATGAAGGAAAGTTTGGGAAATTTGGTGGGAAGTTTGTGCCCGAGTCTCTAATCACTTGCTTGGCCAAATTGGAAGCCGAGTTCAACTTGGTTTTGAACGATTCCAAATTTCAGGTATGCGTTCTTTTCATAAATTATGTTGAGGATTGTTGGGGGAGGAGTCCTATATCGACTAATTAAGGGGTTGATCATGGTACGAGGCCTTTCGGGAAACAAAAAGTAAAGCCACGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTAGAGATCGTGATTTCTAACATGGTATTACAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTCAAATGTCGAACAAAAAAGTTGTGAGCCTCAAATGTCGAACAAAAAAGTTATGAGCCTCAAATGTGTAGTCAAAAGTGACTCCAGTGTCGAACAAAGGATGTATTTTGTTCGAGAGCTCCATAGAACGAGTCAAGATTTGATTAAGGAGAGGCTGTTTGAAGGTTCCATAGGCCTCAGGGGAGGCTCTATGGTGTATTTTATTCGAGAGAAGGATTGTGCTCAAAATGGACATTATCATACTATTACGAAGAGTCGTGATTCCTAATAAAGTATTAGTGAATTAATTTTGGGTGTTGTGGTTGTGCAGGAGGAGCTGGAGGTGGCGCTGAGGGACTTTGTTGGGCGAGAGACGCCGCTGTATCACGCTGAGAGGCTGACAAGGCACTACAAAGACGAGGAAGGAAAAGGTCCAGAGATTTACATAAAAAGAGAGGATTTGAACCACTGCGGTGCACACAAGATGAACAACGCAATAGCGCAGGTTATGATTGCCAAGCGCATGGGGCGGAGGCGTGTGGTTGCCGCCACTGGGGCTGGCCAGCATGGTGTTGCCACCGCAGCTGCCTGCGCCAAACATGATTTAGAGTGCACTATTTTCATGGGCTCTGAAGATATCAAGAAACAATCCTCCAATGTTGTCTTAATCAAGCTGCTCGGTGCTCAGGTACTCCATTAATTTGTCGAGTATTGTTGTGAGGGAACTAATTTAGGGAATGATCATGAGTTTATAAGTAAAGAAGGGAAGCCCAAAGCTCACGAGAGCTTATGCTGAAAATGGACAATATCATGTCATTGTGGAGATTCGTGATTCCTAACAGATTTAATATCTCAGGTGAAATCTGTAGAAGGAAACTTCAAGGATGCGTCGTCGGAGGCGATAAGAGAGTGGGTCGGGAACTTGGAAATGAGCTATTACTTGACGGGGACAGTGGTAGGGCCGCACCCATGTCCAGCAATGGTGAGGGAGTTTCAGTCAGTGATAGGAAAAGAGACGAGAAAACAAGCCATGGAGAAATGGGGAGGCTTACCAGAGGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCATGAACGAAGAAGATGTGCGGTTGATTGGAGTTGAGGCTGCTGGGTTTGGATTGGATAGTGGAAAGCACTCAGCTACTTTGTCTAAAGGACATGTTGGGGTTTACCATGGAGCTTTGAGCTATCTTCTCCAAGATGATGAAGGCCAAATCCTTGTCCCTCATTCCGTCGGTGTAGGGTAAGTATGTTAGAAATCACGAACTTCCATAATATTTTCATATTATCCACTTTAGGTGGAGATTTCTCGACGCGCATCATACCATACCAATGTAGATGTATTCCTTATTTATAAACTCATTATTAATCCCTTAATTAATCGACGTAGAACTCCTCTCTCAACAATCCTCAACCATCCTCCCTTCGAATAAAGTACACTATAGAGCCTCCCCTAAATCCTATGGAGCCTTCGAACAGTCTCCCCTTAATCGAGACTTGACTTCTTCTCTAGAGCCCTTAACAATCCTCCCTTCGAATAAAGTACACCATAGAGCCTCCCCTGATATCTATGGAGCCCTTGAACAACTTCTCGCCTTAATCGAGGCTCGATTCCTTCTCTGAAACACTCAAATAAAGTACACCCTTTATTCGATATTTCAGTCACTTTTGACTACACTTTCGAGAGTCACAAGTTCTTTATTCAACATTTGAGGATTCTATTGACATGACTAAGTTCAGGGCATGACTCCAATACCATGTTAGAAATAACGAACCTCCATAATTGTATGATATTGTCCACTTTGAGCATTAGCTCTCGTGACTCTACTTTTGGTTTCTCCAAAAGACTTCATAATACCAATGCATATGTATTCCTTGCTTATAAACTTATGATCAACCCTTTAATTAGTCGACGACGCGAGACTACTCTCCCACCAATCCTCACTAGAGTATTTTAAATTTCGAACTTTTTTGAATTGCAGGCTGGAATACCCAGGAGTAGGACCAGAGCTGAGCTTCTTAAAAGAGAGTGGCAGAGCTGAATTTCACACAGCAATAGACAAAGAAGCAGTGGAAGTGTTGAGATATATTATTTATGGAATATATCCTAGATATTATATCTTAATATTCTTCCATCTATGGTTAGATTTATAGTATATTTTATTTTATTCTAGTATTTAATTATTTTATATTTTCCTCATTTGTACCGGCTTGTATCCTATTTAAAGGATATCAATATCAATGATAATATACACCTTCCCAATTATATTTTCTATCTCATTCTTAACATGGTATCAGAGCACCGATCTTGATATTCCTAATATCAAAGCATCGATCGTGGTATTCCTAATACCCCCTTGGACTCTGAGTCCAAGGGGAGTATTACCTAAAGCCAAACCCTAACCAATCAGTGAAGTCTTTACCATCGTCAATCATCCAATATCAAGAATACGTTATAAGCATCTTCAAATTTCTCACCAAGCTCTAAGGTGACANATCGATCATTTGCAAATATGGCCGATGTTTCTCAGTTGAATACAGAAGAACAGTCGCCTAATTCCATCCCAAATTTTTCTTCTGGGCAATTACAACAGATTGTACAAGCCTTATCTGCACTCAATCATCGTCCTTTTAGTAATTCTGATAATAACATCAATGTTGCAGGTTTGTTTCCAGTATCTGCATTATCTATTAACTCTACGAGTTCTAATCCATGGATTCTTGATAGTGGAGCTACAGATCATATAGTATCCAAAGCTTCTGTTATCACTGAACCAAAGGCTACCACCATATCTACAATAAATTTGCCTAATGGAGGGACAGCACATGTGTCACATACCGGCAATGTTTCTTTTAATCCTGACCTTAAATTAAACAATGTTTTATGTGTGCCTTCATTCAACTTAAACCTAATGTCTGTCAGCAAACTTACCAATGACTTGAAATGTTATGTGACCTTTTATCCTGATTCTTGTGTTATGCAGGACTTGGCTACGGGGAAGATGATTGGCTCGGGTAAACAATCCGGAGGTCTCTATCATATTTCTTCATCTCCAATCAAGCCTTCAGCAAATCAAGTATCTCAGTCATCTGATTTGTGGCATTTACGCCTAGGTCATCCTTCTCCTTCTCGTTTTAAATTTCTAGCTGATCAATTGCATCTTACAAACGGGTATGCAAATTGGAAGGCATTTTTCCATCATTGGAAGCTTCTCATGCCTTTGCTTATCTCGACAAGCTTTGCCCCACTTTGCGCGACGGCTGCAAGGTGGTGGTCAACTGCAGTGGCCGTGGTGACAAAGACGCTGCCATAGTCTTCAATTATCAACCCTATCAAGAACACAACATATTTTAA

mRNA sequence

ATGGTCCGTGGAAGAACATACCTAGAAATGGCATCCAATATTGTGCACAACATTGCTGCTGCTGTCACTAACCAATTAGATGCAACCACAGGCATAGCCAGGTCGCATGTAAAGCTTGGCAACGGAATTGGGTCACCCACTTTCACGCCAACAAGGAAGCCTACGCCAGCATTAAAGATGCAGCCTGTAATTGATGATCACCCCAAGAACTCTAAACAAACAATTCATGAAGGAAAGTTTGGGAAATTTGGTGGGAAGTTTGTGCCCGAGTCTCTAATCACTTGCTTGGCCAAATTGGAAGCCGAGCACTACAAAGACGAGGAAGGAAAAGGTCCAGAGATTTACATAAAAAGAGAGGATTTGAACCACTGCGGTGCACACAAGATGAACAACGCAATAGCGCAGGTTATGATTGCCAAGCGCATGGGGCGGAGGCGTGTGGTTGCCGCCACTGGGGCTGGCCAGCATGGTGTTGCCACCGCAGCTGCCTGCGCCAAACATGATTTAGACTATTACTTGACGGGGACAGTGGTAGGGCCGCACCCATGTCCAGCAATGGTGAGGGAGTTTCAGTCAGTGATAGGAAAAGAGACGAGAAAACAAGCCATGGAGAAATGGGGAGGCTTACCAGAGGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCATGAACGAAGAAGATGTGCGGTTGATTGGAGTTGAGGCTGCTGGGTTTGGATTGGATAGTGGAAAGCACTCAGCTACTTTGTCTAAAGGACATGTTGGGCTTTGCCCCACTTTGCGCGACGGCTGCAAGGTGGTGGTCAACTGCAGTGGCCGTGGTGACAAAGACGCTGCCATAGTCTTCAATTATCAACCCTATCAAGAACACAACATATTTTAA

Coding sequence (CDS)

ATGGTCCGTGGAAGAACATACCTAGAAATGGCATCCAATATTGTGCACAACATTGCTGCTGCTGTCACTAACCAATTAGATGCAACCACAGGCATAGCCAGGTCGCATGTAAAGCTTGGCAACGGAATTGGGTCACCCACTTTCACGCCAACAAGGAAGCCTACGCCAGCATTAAAGATGCAGCCTGTAATTGATGATCACCCCAAGAACTCTAAACAAACAATTCATGAAGGAAAGTTTGGGAAATTTGGTGGGAAGTTTGTGCCCGAGTCTCTAATCACTTGCTTGGCCAAATTGGAAGCCGAGCACTACAAAGACGAGGAAGGAAAAGGTCCAGAGATTTACATAAAAAGAGAGGATTTGAACCACTGCGGTGCACACAAGATGAACAACGCAATAGCGCAGGTTATGATTGCCAAGCGCATGGGGCGGAGGCGTGTGGTTGCCGCCACTGGGGCTGGCCAGCATGGTGTTGCCACCGCAGCTGCCTGCGCCAAACATGATTTAGACTATTACTTGACGGGGACAGTGGTAGGGCCGCACCCATGTCCAGCAATGGTGAGGGAGTTTCAGTCAGTGATAGGAAAAGAGACGAGAAAACAAGCCATGGAGAAATGGGGAGGCTTACCAGAGGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCATGAACGAAGAAGATGTGCGGTTGATTGGAGTTGAGGCTGCTGGGTTTGGATTGGATAGTGGAAAGCACTCAGCTACTTTGTCTAAAGGACATGTTGGGCTTTGCCCCACTTTGCGCGACGGCTGCAAGGTGGTGGTCAACTGCAGTGGCCGTGGTGACAAAGACGCTGCCATAGTCTTCAATTATCAACCCTATCAAGAACACAACATATTTTAA

Protein sequence

MVRGRTYLEMASNIVHNIAAAVTNQLDATTGIARSHVKLGNGIGSPTFTPTRKPTPALKMQPVIDDHPKNSKQTIHEGKFGKFGGKFVPESLITCLAKLEAEHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATAAACAKHDLDYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGLCPTLRDGCKVVVNCSGRGDKDAAIVFNYQPYQEHNIF
Homology
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BLAST of Cp4.1LG09g09050 vs. Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.5e-37
Identity = 78/146 (53.42%), Postives = 101/146 (69.18%), Query Frame = 1 

Query: 123 HCGAHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATAAAC----AKHDLDYYLTGTVV 182
           + GA  M      V   + +G       +G      AT+ A        +  +Y+ G+V 
Sbjct: 207 YMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVA 266

Query: 183 GPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRL 242
           GPHP P MVREF +VIGKETRKQA+EKWGG P+VLVAC+G GSNA+GLF+EF++++DVR+
Sbjct: 267 GPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRM 326

Query: 243 IGVEAAGFGLDSGKHSATLSKGHVGL 265
           IGVEAAGFGLDSGKH+ATL+KG VG+
Sbjct: 327 IGVEAAGFGLDSGKHAATLTKGEVGV 352

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BLAST of Cp4.1LG09g09050 vs. Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-36
Identity = 76/131 (58.02%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 144 RRRVVAATGAGQH-GVATAAACAKH---------DLDYYLTGTVVGPHPCPAMVREFQSV 203
           R R++ A   G H G AT                +  +Y+ G+V GPHP P MVR+F +V
Sbjct: 226 RMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV 285

Query: 204 IGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKH 263
           IGKETRKQA+EKWGG P+VLVAC+G GSNA+GLF+EF+N+ +VR+IGVEAAGFGLDSGKH
Sbjct: 286 IGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKH 345

Query: 264 SATLSKGHVGL 265
           +ATL+KG VG+
Sbjct: 346 AATLTKGDVGV 356

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BLAST of Cp4.1LG09g09050 vs. Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=1 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 3.2e-36
Identity = 76/131 (58.02%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 144 RRRVVAATGAGQH-GVATAAACAKH---------DLDYYLTGTVVGPHPCPAMVREFQSV 203
           R R++ A   G H G AT                +  +Y+ G+V GPHP P MVR+F +V
Sbjct: 231 RMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV 290

Query: 204 IGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKH 263
           IGKETRKQAMEKWGG P+VLVAC+G GSNA+GLF+EF+++ +VR+IGVEAAGFGLDSGKH
Sbjct: 291 IGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKH 350

Query: 264 SATLSKGHVGL 265
           +ATL+KG VG+
Sbjct: 351 AATLTKGDVGV 361

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BLAST of Cp4.1LG09g09050 vs. Swiss-Prot
Match: TRPB_SYNJB (Tryptophan synthase beta chain OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=trpB PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.1e-35
Identity = 96/276 (34.78%), Postives = 136/276 (49.28%), Query Frame = 1 

Query: 77  EGKFGKFGGKFVPESLITCLAKLE---AEHYKDEEGK----------------------- 136
           +G+FG FGG+FVPE+L++ L +LE     H++D + +                       
Sbjct: 25  QGRFGPFGGRFVPETLMSALTELEEAFEHHWRDPDFRAEFHNLLRDFVGRPSPLYFAQRL 84

Query: 137 -----GPEIYIKREDLNHCGAHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATAAACA 196
                GP+IY+KREDLNH GAHK+NNA+ QV++A RMG+RR++A TGAGQHGVATA  CA
Sbjct: 85  TEYYGGPQIYLKREDLNHTGAHKINNALGQVLLAVRMGKRRIIAETGAGQHGVATATVCA 144

Query: 197 KHDLDYYL-TGTVVGPHPCPAMVREFQSVIGKETR-------------KQAMEKWGGLPE 256
           +  L+  +  G +      P + R    ++G E R              +A+  W    E
Sbjct: 145 RFGLECVIYMGALDMERQAPNVQR--MRLLGAEVRGVESGTRTLKDALSEAIRDWVTNVE 204

Query: 257 VLVACIGS-------------------------------------------GSNALGLFN 265
                IG+                                           GSNALGLFN
Sbjct: 205 TTHYVIGTVAGPHPYPKLVRAFHDVIGQETRQQCQEKWGGLPDVLLACVGGGSNALGLFN 264

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BLAST of Cp4.1LG09g09050 vs. Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 123 HCGAHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATAAAC----AKHDLDYYLTGTVV 182
           + GA  M      V   K +G       +G      AT+ A        +  +Y+ G+V 
Sbjct: 130 YMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVA 189

Query: 183 GPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRL 242
           GPHP P MVREF  VIGKETR+QAM KWGG P+VLVAC+G GSNA+GLF+EF+ ++DVRL
Sbjct: 190 GPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRL 249

Query: 243 IGVEAAGFGLDSGKHSATLSKGHVGL 265
           IGVEAAG G+D+ KH+ATL+KG VG+
Sbjct: 250 IGVEAAGHGVDTDKHAATLTKGQVGV 275

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BLAST of Cp4.1LG09g09050 vs. TrEMBL
Match: A0A0D2VBS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G178100 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63
Identity = 135/209 (64.59%), Postives = 150/209 (71.77%), Query Frame = 1 

Query: 78  GKFGKFGGKFVPESLITCL------------AKLEAEHYKDEEGKGPEIYIKREDLNHCG 137
           GKFGKFGGK+  E L T L            A+    HY + EG+GPEIY+KR DLNH G
Sbjct: 32  GKFGKFGGKY--EELTTALRDYVGRETPLYFAQRLTNHYNNSEGEGPEIYLKRGDLNHGG 91

Query: 138 AHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATAAACAKH----------DLDYYLTG 197
           AHK NNAIAQ MIAKRMGR+ +VAATGAGQHGVATAAA A            +  YYL G
Sbjct: 92  AHKRNNAIAQAMIAKRMGRKSIVAATGAGQHGVATAAAYASSEAIRAWVGNLETKYYLAG 151

Query: 198 TVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEED 257
           T VGPHPCP+MVREFQS+IGKETRKQAMEKW           GSGSNALGLF+EF+N+ED
Sbjct: 152 TTVGPHPCPSMVREFQSIIGKETRKQAMEKW-----------GSGSNALGLFHEFINDED 211

Query: 258 VRLIGVEAAGFGLDSGKHSATLSKGHVGL 265
           VRLIGVEAAGFGLDSGKH ATL++G V L
Sbjct: 212 VRLIGVEAAGFGLDSGKHVATLTRGDVDL 227

[Close]
BLAST of Cp4.1LG09g09050 vs. TrEMBL
Match: A0A0K9QVL8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136280 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.1e-62
Identity = 137/299 (45.82%), Postives = 170/299 (56.86%), Query Frame = 1 

Query: 54  PTPALKMQPVIDDHPKNSKQTIHEGKFGKFGGKFVPESLITCLAKLE------------- 113
           P+ +L  Q       K+       GKFGKFGGK+VPE L+TCL+ LE             
Sbjct: 37  PSASLSYQSSTKTANKSCSSFSSTGKFGKFGGKYVPELLVTCLSDLEEEFYMALNDAKFQ 96

Query: 114 -----------------------AEHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVM 173
                                  +EHYKD++G GPEIYIKREDLNH GAHK+NNA+AQ M
Sbjct: 97  EELGTALRDYVGRETALYYAERLSEHYKDKDGYGPEIYIKREDLNHGGAHKINNALAQAM 156

Query: 174 IAKRMGRRRVVAATGA-------------------------------------------- 233
           +AKRMGR  +V ATGA                                            
Sbjct: 157 LAKRMGRMSIVTATGAGQHGVAAAAVCAKLGLSCTVIMGRLDIERQPTNVRLMKLLGALV 216

Query: 234 ----GQHGVATAAACAKH----DLDYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEK 265
               G +  A++ A  +     D  Y++ G+V+GPHPCP MVREFQSVIGKE RKQAMEK
Sbjct: 217 KPVDGNYKDASSEAVREWVGNLDTSYHMPGSVIGPHPCPTMVREFQSVIGKEVRKQAMEK 276

[Close]
BLAST of Cp4.1LG09g09050 vs. TrEMBL
Match: A0A103XUZ5_CYNCS (Tryptophan synthase, beta chain OS=Cynara cardunculus var. scolymus GN=Ccrd_000503 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-60
Identity = 123/208 (59.13%), Postives = 147/208 (70.67%), Query Frame = 1 

Query: 102 EHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATA 161
           +HYK+  G+GPEIY+KREDLNH G++KMNN IAQ ++AKRMGR+ V+ AT A +HGVATA
Sbjct: 25  DHYKNINGEGPEIYLKREDLNHGGSYKMNNVIAQAILAKRMGRKSVITATSADRHGVATA 84

Query: 162 AACAKHDL---------DYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEV 221
           AA A   +         +YYL+GT VGPHP P MVREF S+IG+ETRKQAMEKWGG P+V
Sbjct: 85  AAAASESMREWLGNLETEYYLSGTAVGPHPIPTMVREFNSIIGQETRKQAMEKWGGKPDV 144

Query: 222 LVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKHSATLSKGHVG------LCP 281
           LVAC+GSG NALGLF+EFM++E VR+IGVE  G       H A+L +          LCP
Sbjct: 145 LVACVGSGCNALGLFHEFMSDESVRMIGVEGGG---GDELHCASLVRASHALAYLEKLCP 204

Query: 282 TLRDGCKVVVNCSGRGDKDAAIVFNYQP 295
           TL  G KVVVNC G G  DA IV N  P
Sbjct: 205 TLPRGTKVVVNCCGSGYNDAPIVLNDMP 229

[Close]
BLAST of Cp4.1LG09g09050 vs. TrEMBL
Match: A0A0K9QVJ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136280 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.8e-56
Identity = 119/244 (48.77%), Postives = 151/244 (61.89%), Query Frame = 1 

Query: 73  QTIHEGKFGKFGGKFVPESLITCLAKLEAEHYKDEEGKGPEIYIKREDLNHCGAHKMNNA 132
           + + E + G     +V        A+  +EHYKD++G GPEIYIKREDLNH GAHK+NNA
Sbjct: 10  ELVREEELGTALRDYVGRETALYYAERLSEHYKDKDGYGPEIYIKREDLNHGGAHKINNA 69

Query: 133 IAQVMIAKRMGRRRVVAATGA--------------------------------------- 192
           +AQ M+AKRMGR  +V ATGA                                       
Sbjct: 70  LAQAMLAKRMGRMSIVTATGAGQHGVAAAAVCAKLGLSCTVIMGRLDIERQPTNVRLMKL 129

Query: 193 ---------GQHGVATAAACAKH----DLDYYLTGTVVGPHPCPAMVREFQSVIGKETRK 252
                    G +  A++ A  +     D  Y++ G+V+GPHPCP MVREFQSVIGKE RK
Sbjct: 130 LGALVKPVDGNYKDASSEAVREWVGNLDTSYHMPGSVIGPHPCPTMVREFQSVIGKEVRK 189

Query: 253 QAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKHSATLSKG 265
           QAMEKWGG P+VLVAC+GSGSNA+GLF+EF+ +E+VRL+GVEAAGFGL++G HSATLS+G
Sbjct: 190 QAMEKWGGKPDVLVACVGSGSNAMGLFHEFIEDEEVRLVGVEAAGFGLETGYHSATLSRG 249

[Close]
BLAST of Cp4.1LG09g09050 vs. TrEMBL
Match: A0A0K9QX75_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136280 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.3e-55
Identity = 115/216 (53.24%), Postives = 142/216 (65.74%), Query Frame = 1 

Query: 101 AEHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVMIAKRMGRRRVVAATGA------- 160
           +EHYKD++G GPEIYIKREDLNH GAHK+NNA+AQ M+AKRMGR  +V ATGA       
Sbjct: 35  SEHYKDKDGYGPEIYIKREDLNHGGAHKINNALAQAMLAKRMGRMSIVTATGAGQHGVAA 94

Query: 161 -----------------------------------------GQHGVATAAACAKH----D 220
                                                    G +  A++ A  +     D
Sbjct: 95  AAVCAKLGLSCTVIMGRLDIERQPTNVRLMKLLGALVKPVDGNYKDASSEAVREWVGNLD 154

Query: 221 LDYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFN 265
             Y++ G+V+GPHPCP MVREFQSVIGKE RKQAMEKWGG P+VLVAC+GSGSNA+GLF+
Sbjct: 155 TSYHMPGSVIGPHPCPTMVREFQSVIGKEVRKQAMEKWGGKPDVLVACVGSGSNAMGLFH 214

[Close]
BLAST of Cp4.1LG09g09050 vs. TAIR10
Match: AT5G28237.1 (AT5G28237.1 Pyridoxal-5'-phosphate-dependent enzyme family protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-40
Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 171 YYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEF 230
           YYL+GTVVGPHPCP +VREFQSVIGKETR+QA + WGG P+VLVAC+GSGSNALGLF+EF
Sbjct: 254 YYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACVGSGSNALGLFHEF 313

Query: 231 MNEEDVRLIGVEAAGFGLDSGKHSATLSKGHVGL 265
           + +EDVRL+GVEAAG GLDSGKHSATL+ G VG+
Sbjct: 314 VGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGV 347

[Close]
BLAST of Cp4.1LG09g09050 vs. TAIR10
Match: AT5G54810.1 (AT5G54810.1 tryptophan synthase beta-subunit 1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-37
Identity = 76/131 (58.02%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 144 RRRVVAATGAGQH-GVATAAACAKH---------DLDYYLTGTVVGPHPCPAMVREFQSV 203
           R R++ A   G H G AT                +  +Y+ G+V GPHP P MVR+F +V
Sbjct: 226 RMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV 285

Query: 204 IGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKH 263
           IGKETRKQA+EKWGG P+VLVAC+G GSNA+GLF+EF+N+ +VR+IGVEAAGFGLDSGKH
Sbjct: 286 IGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKH 345

Query: 264 SATLSKGHVGL 265
           +ATL+KG VG+
Sbjct: 346 AATLTKGDVGV 356

[Close]
BLAST of Cp4.1LG09g09050 vs. TAIR10
Match: AT4G27070.1 (AT4G27070.1 tryptophan synthase beta-subunit 2)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-37
Identity = 76/131 (58.02%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 144 RRRVVAATGAGQH-GVATAAACAKH---------DLDYYLTGTVVGPHPCPAMVREFQSV 203
           R R++ A   G H G AT                +  +Y+ G+V GPHP P MVR+F +V
Sbjct: 231 RMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV 290

Query: 204 IGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKH 263
           IGKETRKQAMEKWGG P+VLVAC+G GSNA+GLF+EF+++ +VR+IGVEAAGFGLDSGKH
Sbjct: 291 IGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKH 350

Query: 264 SATLSKGHVGL 265
           +ATL+KG VG+
Sbjct: 351 AATLTKGDVGV 361

[Close]
BLAST of Cp4.1LG09g09050 vs. NCBI nr
Match: gi|763800200|gb|KJB67155.1| (hypothetical protein B456_010G178100 [Gossypium raimondii])

HSP 1 Score: 250.4 bits (638), Expect = 4.1e-63
Identity = 135/209 (64.59%), Postives = 150/209 (71.77%), Query Frame = 1 

Query: 78  GKFGKFGGKFVPESLITCL------------AKLEAEHYKDEEGKGPEIYIKREDLNHCG 137
           GKFGKFGGK+  E L T L            A+    HY + EG+GPEIY+KR DLNH G
Sbjct: 32  GKFGKFGGKY--EELTTALRDYVGRETPLYFAQRLTNHYNNSEGEGPEIYLKRGDLNHGG 91

Query: 138 AHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATAAACAKH----------DLDYYLTG 197
           AHK NNAIAQ MIAKRMGR+ +VAATGAGQHGVATAAA A            +  YYL G
Sbjct: 92  AHKRNNAIAQAMIAKRMGRKSIVAATGAGQHGVATAAAYASSEAIRAWVGNLETKYYLAG 151

Query: 198 TVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEED 257
           T VGPHPCP+MVREFQS+IGKETRKQAMEKW           GSGSNALGLF+EF+N+ED
Sbjct: 152 TTVGPHPCPSMVREFQSIIGKETRKQAMEKW-----------GSGSNALGLFHEFINDED 211

Query: 258 VRLIGVEAAGFGLDSGKHSATLSKGHVGL 265
           VRLIGVEAAGFGLDSGKH ATL++G V L
Sbjct: 212 VRLIGVEAAGFGLDSGKHVATLTRGDVDL 227

[Close]
BLAST of Cp4.1LG09g09050 vs. NCBI nr
Match: gi|902189175|gb|KNA11304.1| (hypothetical protein SOVF_136280 isoform C [Spinacia oleracea])

HSP 1 Score: 246.5 bits (628), Expect = 5.9e-62
Identity = 137/299 (45.82%), Postives = 170/299 (56.86%), Query Frame = 1 

Query: 54  PTPALKMQPVIDDHPKNSKQTIHEGKFGKFGGKFVPESLITCLAKLE------------- 113
           P+ +L  Q       K+       GKFGKFGGK+VPE L+TCL+ LE             
Sbjct: 37  PSASLSYQSSTKTANKSCSSFSSTGKFGKFGGKYVPELLVTCLSDLEEEFYMALNDAKFQ 96

Query: 114 -----------------------AEHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVM 173
                                  +EHYKD++G GPEIYIKREDLNH GAHK+NNA+AQ M
Sbjct: 97  EELGTALRDYVGRETALYYAERLSEHYKDKDGYGPEIYIKREDLNHGGAHKINNALAQAM 156

Query: 174 IAKRMGRRRVVAATGA-------------------------------------------- 233
           +AKRMGR  +V ATGA                                            
Sbjct: 157 LAKRMGRMSIVTATGAGQHGVAAAAVCAKLGLSCTVIMGRLDIERQPTNVRLMKLLGALV 216

Query: 234 ----GQHGVATAAACAKH----DLDYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEK 265
               G +  A++ A  +     D  Y++ G+V+GPHPCP MVREFQSVIGKE RKQAMEK
Sbjct: 217 KPVDGNYKDASSEAVREWVGNLDTSYHMPGSVIGPHPCPTMVREFQSVIGKEVRKQAMEK 276

[Close]
BLAST of Cp4.1LG09g09050 vs. NCBI nr
Match: gi|976910727|gb|KVH97400.1| (Tryptophan synthase, beta chain [Cynara cardunculus var. scolymus])

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 123/208 (59.13%), Postives = 147/208 (70.67%), Query Frame = 1 

Query: 102 EHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVMIAKRMGRRRVVAATGAGQHGVATA 161
           +HYK+  G+GPEIY+KREDLNH G++KMNN IAQ ++AKRMGR+ V+ AT A +HGVATA
Sbjct: 25  DHYKNINGEGPEIYLKREDLNHGGSYKMNNVIAQAILAKRMGRKSVITATSADRHGVATA 84

Query: 162 AACAKHDL---------DYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEV 221
           AA A   +         +YYL+GT VGPHP P MVREF S+IG+ETRKQAMEKWGG P+V
Sbjct: 85  AAAASESMREWLGNLETEYYLSGTAVGPHPIPTMVREFNSIIGQETRKQAMEKWGGKPDV 144

Query: 222 LVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKHSATLSKGHVG------LCP 281
           LVAC+GSG NALGLF+EFM++E VR+IGVE  G       H A+L +          LCP
Sbjct: 145 LVACVGSGCNALGLFHEFMSDESVRMIGVEGGG---GDELHCASLVRASHALAYLEKLCP 204

Query: 282 TLRDGCKVVVNCSGRGDKDAAIVFNYQP 295
           TL  G KVVVNC G G  DA IV N  P
Sbjct: 205 TLPRGTKVVVNCCGSGYNDAPIVLNDMP 229

[Close]
BLAST of Cp4.1LG09g09050 vs. NCBI nr
Match: gi|902189173|gb|KNA11302.1| (hypothetical protein SOVF_136280 isoform A [Spinacia oleracea])

HSP 1 Score: 225.3 bits (573), Expect = 1.4e-55
Identity = 119/244 (48.77%), Postives = 151/244 (61.89%), Query Frame = 1 

Query: 73  QTIHEGKFGKFGGKFVPESLITCLAKLEAEHYKDEEGKGPEIYIKREDLNHCGAHKMNNA 132
           + + E + G     +V        A+  +EHYKD++G GPEIYIKREDLNH GAHK+NNA
Sbjct: 10  ELVREEELGTALRDYVGRETALYYAERLSEHYKDKDGYGPEIYIKREDLNHGGAHKINNA 69

Query: 133 IAQVMIAKRMGRRRVVAATGA--------------------------------------- 192
           +AQ M+AKRMGR  +V ATGA                                       
Sbjct: 70  LAQAMLAKRMGRMSIVTATGAGQHGVAAAAVCAKLGLSCTVIMGRLDIERQPTNVRLMKL 129

Query: 193 ---------GQHGVATAAACAKH----DLDYYLTGTVVGPHPCPAMVREFQSVIGKETRK 252
                    G +  A++ A  +     D  Y++ G+V+GPHPCP MVREFQSVIGKE RK
Sbjct: 130 LGALVKPVDGNYKDASSEAVREWVGNLDTSYHMPGSVIGPHPCPTMVREFQSVIGKEVRK 189

Query: 253 QAMEKWGGLPEVLVACIGSGSNALGLFNEFMNEEDVRLIGVEAAGFGLDSGKHSATLSKG 265
           QAMEKWGG P+VLVAC+GSGSNA+GLF+EF+ +E+VRL+GVEAAGFGL++G HSATLS+G
Sbjct: 190 QAMEKWGGKPDVLVACVGSGSNAMGLFHEFIEDEEVRLVGVEAAGFGLETGYHSATLSRG 249

[Close]
BLAST of Cp4.1LG09g09050 vs. NCBI nr
Match: gi|902189174|gb|KNA11303.1| (hypothetical protein SOVF_136280 isoform B [Spinacia oleracea])

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 115/216 (53.24%), Postives = 142/216 (65.74%), Query Frame = 1 

Query: 101 AEHYKDEEGKGPEIYIKREDLNHCGAHKMNNAIAQVMIAKRMGRRRVVAATGA------- 160
           +EHYKD++G GPEIYIKREDLNH GAHK+NNA+AQ M+AKRMGR  +V ATGA       
Sbjct: 35  SEHYKDKDGYGPEIYIKREDLNHGGAHKINNALAQAMLAKRMGRMSIVTATGAGQHGVAA 94

Query: 161 -----------------------------------------GQHGVATAAACAKH----D 220
                                                    G +  A++ A  +     D
Sbjct: 95  AAVCAKLGLSCTVIMGRLDIERQPTNVRLMKLLGALVKPVDGNYKDASSEAVREWVGNLD 154

Query: 221 LDYYLTGTVVGPHPCPAMVREFQSVIGKETRKQAMEKWGGLPEVLVACIGSGSNALGLFN 265
             Y++ G+V+GPHPCP MVREFQSVIGKE RKQAMEKWGG P+VLVAC+GSGSNA+GLF+
Sbjct: 155 TSYHMPGSVIGPHPCPTMVREFQSVIGKEVRKQAMEKWGGKPDVLVACVGSGSNAMGLFH 214

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRPB_CAMAC6.5e-3753.42Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB ... [more]
TRPB1_ARATH1.9e-3658.02Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 ... [more]
TRBP2_ARATH3.2e-3658.02Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 ... [more]
TRPB_SYNJB6.1e-3534.78Tryptophan synthase beta chain OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=... [more]
TRPB1_MAIZE1.4e-3451.37Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1[more]
BLAST of Cp4.1LG09g09050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2VBS2_GOSRA2.8e-6364.59Uncharacterized protein OS=Gossypium raimondii GN=B456_010G178100 PE=4 SV=1[more]
A0A0K9QVL8_SPIOL4.1e-6245.82Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136280 PE=3 SV=1[more]
A0A103XUZ5_CYNCS1.3e-6059.13Tryptophan synthase, beta chain OS=Cynara cardunculus var. scolymus GN=Ccrd_0005... [more]
A0A0K9QVJ7_SPIOL9.8e-5648.77Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136280 PE=3 SV=1[more]
A0A0K9QX75_SPIOL8.3e-5553.24Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136280 PE=3 SV=1[more]
BLAST of Cp4.1LG09g09050 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G28237.12.3e-4078.72 Pyridoxal-5'-phosphate-dependent enzyme family protein[more]
AT5G54810.11.1e-3758.02 tryptophan synthase beta-subunit 1[more]
AT4G27070.11.8e-3758.02 tryptophan synthase beta-subunit 2[more]
BLAST of Cp4.1LG09g09050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|763800200|gb|KJB67155.1|4.1e-6364.59hypothetical protein B456_010G178100 [Gossypium raimondii][more]
gi|902189175|gb|KNA11304.1|5.9e-6245.82hypothetical protein SOVF_136280 isoform C [Spinacia oleracea][more]
gi|976910727|gb|KVH97400.1|1.9e-6059.13Tryptophan synthase, beta chain [Cynara cardunculus var. scolymus][more]
gi|902189173|gb|KNA11302.1|1.4e-5548.77hypothetical protein SOVF_136280 isoform A [Spinacia oleracea][more]
gi|902189174|gb|KNA11303.1|1.2e-5453.24hypothetical protein SOVF_136280 isoform B [Spinacia oleracea][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006568tryptophan metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004834tryptophan synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR006653Trp_synth_b_CS
IPR001926PLP-dep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006568 tryptophan metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004834 tryptophan synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09050.1Cp4.1LG09g09050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymePFAMPF00291PALPcoord: 178..246
score: 7.4E-7coord: 111..172
score: 5.1
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymeunknownSSF53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 77..290
score: 6.17
IPR006653Tryptophan synthase, beta chain, conserved sitePROSITEPS00168TRP_SYNTHASE_BETAcoord: 121..135
scor
NoneNo IPR availableGENE3DG3DSA:3.40.50.1100coord: 166..264
score: 1.1E-29coord: 80..165
score: 4.5
NoneNo IPR availablePANTHERPTHR10314SER/THR DEHYDRATASE, TRP SYNTHASEcoord: 78..263
score: 1.3
NoneNo IPR availablePANTHERPTHR10314:SF123TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEINcoord: 78..263
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09050Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g09050Melon (DHL92) v3.6.1cpemedB053
Cp4.1LG09g09050Silver-seed gourdcarcpeB0694
Cp4.1LG09g09050Silver-seed gourdcarcpeB0911
Cp4.1LG09g09050Silver-seed gourdcarcpeB1218
Cp4.1LG09g09050Silver-seed gourdcarcpeB1287
Cp4.1LG09g09050Silver-seed gourdcarcpeB1395
Cp4.1LG09g09050Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g09050Cucumber (Chinese Long) v3cpecucB0054
Cp4.1LG09g09050Wax gourdcpewgoB0033
Cp4.1LG09g09050Wax gourdcpewgoB0047
Cp4.1LG09g09050Wax gourdcpewgoB0041
Cp4.1LG09g09050Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g09050Cucurbita pepo (Zucchini)cpecpeB019
Cp4.1LG09g09050Cucurbita pepo (Zucchini)cpecpeB044
Cp4.1LG09g09050Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG09g09050Cucurbita pepo (Zucchini)cpecpeB050
Cp4.1LG09g09050Cucumber (Gy14) v1cgycpeB0031
Cp4.1LG09g09050Cucumber (Gy14) v1cgycpeB0156
Cp4.1LG09g09050Cucurbita maxima (Rimu)cmacpeB212
Cp4.1LG09g09050Cucurbita maxima (Rimu)cmacpeB414
Cp4.1LG09g09050Cucurbita maxima (Rimu)cmacpeB652
Cp4.1LG09g09050Cucurbita maxima (Rimu)cmacpeB859
Cp4.1LG09g09050Cucurbita moschata (Rifu)cmocpeB182
Cp4.1LG09g09050Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09050Cucurbita moschata (Rifu)cmocpeB602
Cp4.1LG09g09050Cucurbita moschata (Rifu)cmocpeB799
Cp4.1LG09g09050Wild cucumber (PI 183967)cpecpiB047
Cp4.1LG09g09050Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g09050Cucumber (Chinese Long) v2cpecuB052
Cp4.1LG09g09050Bottle gourd (USVL1VR-Ls)cpelsiB022
Cp4.1LG09g09050Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g09050Watermelon (Charleston Gray)cpewcgB031
Cp4.1LG09g09050Watermelon (Charleston Gray)cpewcgB036
Cp4.1LG09g09050Watermelon (97103) v1cpewmB025
Cp4.1LG09g09050Watermelon (97103) v1cpewmB043
Cp4.1LG09g09050Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g09050Melon (DHL92) v3.5.1cpemeB045
Cp4.1LG09g09050Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09050Cucumber (Gy14) v2cgybcpeB707