Cp4.1LG09g09040 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTryptophan synthase beta chain, putative
LocationCp4.1LG09 : 8147806 .. 8149821 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTAGAGCCATAGCCAGATCGCAGGTAAAGCTTGGAAGGGGAATTGGGTTACTCAGTTTCAGGGCTACAAAGAAGCCTATGCCATCAATAAAGATGCAGCTTGGTGATGAGAAGAACTCCATAAAACCCGGTGGGCACTTGGTGAAGGATGTTCTAGGCTCTCAATTCAAAGTATTGGGAGACCGGTTCAACTCGGCTCTGAACGATCCCAAATTTCAGGTTTGTGTTCTTCTCTCTTGAAATTCATGAATTAATTTAGATGAGCACAACTCTCCACAATGGTATGATTTGTCCATTTTGAGCATAATCTCTCGTGGCTTTGATTTGAGCTTCTAAAAAAGGCTCGTACTAATGGAGAGAGTATTTTTTGTTCATAAACTCATGATCATTCTCTAAATTAGCCGATATCGGACTTTCATCATCCAACATCGTGGTTGTGTAGGAGGAGCTGGAGGTGGCACGGAGGGACTTTGTTGTGGGAGAGACGCTGCTGTATTATGCTGAGAGCCTCACAAAGCACTACAAAGACAAGAAAGGAAAAGGCCCCGAGATTTACATAAAAAGAGAGGATCTGAACCACTGCGGAGCACACATGATGAACAACGCAATAGCGCAGGTTATGATTGCCAAGCGCATGGGGCGGAGGAGTGTGGTTGCCGCCACTGGGGGTGGCCAGCACGGCGTTGCCACAGCAACTGCCTGCGTCAAACATAAATTAGAGTGCACATTTTCATGGGCTCTGAAGATATCAAGAAGCAATCTTCCAATGTTGAGTTAATGGAGCAGCTTGGAGCTCAGGTACTTCAGTTATACTTTACCATATATATCATATCTAGGTATTTGCGGAGAATTCTCGAAGCTCTTTCTTTCTTTTTCAATTCCTTTGAGATTTTCTTTTAAAAGGCTCCTATGAGCCTTGATCTTGTGTTCGAGTCATAGTAAAGAAGATCTTGTGGAATATTGAAGAACTTTTGCATTGTTGGAATACTCCGAACAATCTTGCATGCTGGGGTTTCTACAAAAGTAGAGTTCTTACTCTCGTATTTATTGCTTTTGTTTTAATTTATAATAAAATCAAAACGGTACCCAATGCTTCCGCTACTTAGATGAAGAGTTCATTCCCTTCGATTCCATTCACACTTATCATAGATATCTTTCTATATATTACCATTTTCATATCTTTACAATTTTTTTATATTATAAATAGAGAACTTTTAAATTAAATAGAATGATTTTAGCACATATTCTCAATAATAATTGATATCATATCTATCCTTGGTGGAGGAAAGCATTATTGGAGGTCATAAAAGTGTATGCTGACAACCATGAAACAATCTATTATCTGGCGGGGACAGTGGTAGGGCCGCACCCATGTCCAGAAATGGTGAGGGGGTTTCAGTCAGTGATCGGAAAAGAGACGAGAAGACAAGCCATGGAGAAATGGGGAGGCTTACCAGAGGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCAAAGAAGAAGATGTGAGGTTGATTGGAGTTGAGGCTGCTGGGATTGGGTCAGAAAGACATGATGATGTTAACCATGGAAATTTGAGCGATATCTTAAAACATGCCGAAGGCTCAATCTTTAACCGTCCTTCCATCTCTGCAGCGTAAGCATTTCATCAGAATATTTGCTAAAACTCCCGCACCTTTTTTGTACTTAATAAAGTAAGACTATAACATTTTTAATTTTAATTCGGTGCGAAATTGAGCTGCAGATTGGAAGATCTCGACCATCTCAAAGTATTGATAGATTTGAAGCACCTAAATGAGACCCACAGAGTTGAAGTTCACACTGTACAAGACGAGGAAGCTATGGAAGCTCATAAACGGGTGTACGAATTGGAAGGCATTAATCCACCATTTGAAGCTGCTCATGCCTTTGCTTATCTTGACAAGCTTTCCCCGACTTTGTCCGACGGCTGGAAGGTAGTGGTCAACTGCAGTGGCCGTGGTGATTAA

mRNA sequence

ATGCAGAGCCTCACAAAGCACTACAAAGACAAGAAAGGAAAAGGCCCCGAGATTTACATAAAAAGAGAGGATCTGAACCACTGCGGAGCACACATGATGAACAACGCAATAGCGCAGGTTATGATTGCCAAGCGCATGGGGCGGAGGAGTGTGGTTGCCGCCACTGGGGGTGGCCAGCACGGCGTTGCCACAGCAACTGCCTGCGTCAAACATAAATTAGAGTGCACATTTTCATGGGCTCTGAAGATATCAAGAAGCAATCTTCCAATGTTGATGGTAGGGCCGCACCCATGTCCAGAAATGGTGAGGGGGTTTCAGTCAGTGATCGGAAAAGAGACGAGAAGACAAGCCATGGAGAAATGGGGAGGCTTACCAGAGGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCAAAGAAGAAGATGTGAGGTTGATTGGAGTTGAGGCTGCTGGGATTGGGTCAGAAAGACATGATGATGTTAACCATGGAAATTTGAGCGATATCTTAAAACATGCCGAAGGCTCAATCTTTAACCGTCCTTCCATCTCTGCAGCATTGGAAGATCTCGACCATCTCAAAGTATTGATAGATTTGAAGCACCTAAATGAGACCCACAGAGTTGAAGTTCACACTGTACAAGACGAGGAAGCTATGGAAGCTCATAAACGGGTGTACGAATTGGAAGGCATTAATCCACCATTTGAAGCTGCTCATGCCTTTGCTTATCTTGACAAGCTTTCCCCGACTTTGTCCGACGGCTGGAAGGTAGTGGTCAACTGCAGTGGCCGTGGTGATTAA

Coding sequence (CDS)

ATGCAGAGCCTCACAAAGCACTACAAAGACAAGAAAGGAAAAGGCCCCGAGATTTACATAAAAAGAGAGGATCTGAACCACTGCGGAGCACACATGATGAACAACGCAATAGCGCAGGTTATGATTGCCAAGCGCATGGGGCGGAGGAGTGTGGTTGCCGCCACTGGGGGTGGCCAGCACGGCGTTGCCACAGCAACTGCCTGCGTCAAACATAAATTAGAGTGCACATTTTCATGGGCTCTGAAGATATCAAGAAGCAATCTTCCAATGTTGATGGTAGGGCCGCACCCATGTCCAGAAATGGTGAGGGGGTTTCAGTCAGTGATCGGAAAAGAGACGAGAAGACAAGCCATGGAGAAATGGGGAGGCTTACCAGAGGTGCTTGTGGCATGCATAGGGAGTGGCTCAAACGCGTTGGGACTGTTCAATGAGTTCAAAGAAGAAGATGTGAGGTTGATTGGAGTTGAGGCTGCTGGGATTGGGTCAGAAAGACATGATGATGTTAACCATGGAAATTTGAGCGATATCTTAAAACATGCCGAAGGCTCAATCTTTAACCGTCCTTCCATCTCTGCAGCATTGGAAGATCTCGACCATCTCAAAGTATTGATAGATTTGAAGCACCTAAATGAGACCCACAGAGTTGAAGTTCACACTGTACAAGACGAGGAAGCTATGGAAGCTCATAAACGGGTGTACGAATTGGAAGGCATTAATCCACCATTTGAAGCTGCTCATGCCTTTGCTTATCTTGACAAGCTTTCCCCGACTTTGTCCGACGGCTGGAAGGTAGTGGTCAACTGCAGTGGCCGTGGTGATTAA

Protein sequence

MQSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGGQHGVATATACVKHKLECTFSWALKISRSNLPMLMVGPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSNALGLFNEFKEEDVRLIGVEAAGIGSERHDDVNHGNLSDILKHAEGSIFNRPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAHAFAYLDKLSPTLSDGWKVVVNCSGRGD
Homology
[Close]
BLAST of Cp4.1LG09g09040 vs. Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=1 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-60
Identity = 142/327 (43.43%), Postives = 188/327 (57.49%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAA------- 61
           + LT+HY+ + G+GP IY+KREDLNH GAH +NNA+AQ ++AKR+G++ ++A        
Sbjct: 140 ERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHG 199

Query: 62  -----------------------------------TGGGQHGVATATACVKHKL-ECTFS 121
                                               G    GV + TA +K    E    
Sbjct: 200 VATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 259

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETR+QAMEKWGG P+VLVAC+G GSN
Sbjct: 260 WVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSN 319

Query: 182 ALGLFNEFKEE-DVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF ++ +VR+IGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 320 AMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIE 379

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E  +V DEEA+EA KRV  LEGI P  E +H
Sbjct: 380 PHSISAG---LDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSH 439

[Close]
BLAST of Cp4.1LG09g09040 vs. Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 8.5e-60
Identity = 141/327 (43.12%), Postives = 189/327 (57.80%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMG-------------- 61
           + LT+HYK   G GP IY+KREDLNH GAH +NNA+AQ ++AKR+G              
Sbjct: 108 ERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKQRIIAETGAGQHG 167

Query: 62  ------------------------RRSV----VAATGGGQHGVATATACVKHKL-ECTFS 121
                                   R+++    +   G     V + TA +K    E    
Sbjct: 168 VATATVCRRFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 227

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIGKETRRQAM+KWGG P+VLVAC+G GSN
Sbjct: 228 WVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSN 287

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF +++DVRL+G+EAAG G  +++H          V HG++S +L+  +G +  
Sbjct: 288 AMGLFHEFVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIE 347

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E  +V D+EA++A KRV  LEGI P  E +H
Sbjct: 348 PHSISAG---LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSH 407

[Close]
BLAST of Cp4.1LG09g09040 vs. Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-59
Identity = 141/327 (43.12%), Postives = 188/327 (57.49%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMG-------------- 61
           + LT+HY+ + G+GP IY+KREDLNH GAH +NNA+AQ ++AKR+G              
Sbjct: 135 ERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHG 194

Query: 62  ------------------------RRSV----VAATGGGQHGVATATACVKHKL-ECTFS 121
                                   R+++    +   G    GV + TA +K    E    
Sbjct: 195 VATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 254

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 255 WVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSN 314

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF  + +VR+IGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 315 AMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIE 374

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +     +  R E +++ DEEA+EA KRV  LEGI P  E +H
Sbjct: 375 PHSISAG---LDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSH 434

[Close]
BLAST of Cp4.1LG09g09040 vs. Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.2e-59
Identity = 142/327 (43.43%), Postives = 185/327 (56.57%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGR------------- 61
           + LT HYK   G+GPEIY+KREDLNH GAH +NNA+AQ ++AKR+G+             
Sbjct: 131 ERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHG 190

Query: 62  ------------RSVV-----------------AATGGGQHGVATATACVKHKL-ECTFS 121
                       + V+                    G     V + TA +K    E    
Sbjct: 191 VATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 250

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 251 WVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSN 310

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF  ++DVR+IGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 311 AMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIE 370

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E +   DEEA+EA KR+  LEGI P  E +H
Sbjct: 371 PHSISAG---LDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSH 430

[Close]
BLAST of Cp4.1LG09g09040 vs. Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 9.4e-59
Identity = 142/327 (43.43%), Postives = 185/327 (56.57%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKR---------------- 61
           + LT+HYK   G GP IY+KREDLNH GAH +NNA+AQ ++AKR                
Sbjct: 54  ERLTEHYKRADGTGPLIYLKREDLNHRGAHKINNAVAQALLAKRLGKQRIIAETGAGQHG 113

Query: 62  -----------------MGRRSV---------VAATGGGQHGVATATACVKHKL-ECTFS 121
                            MG + +         +   G     V + TA +K    E    
Sbjct: 114 VATATVCARFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRD 173

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIGKETRRQAM KWGG P+VLVAC+G GSN
Sbjct: 174 WVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSN 233

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF +++DVRLIGVEAAG G  +++H          V HG++S +L+  +G +  
Sbjct: 234 AMGLFHEFVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIE 293

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E  +V D+EA++A KRV  LEGI P  E +H
Sbjct: 294 PHSISAG---LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSH 353

[Close]
BLAST of Cp4.1LG09g09040 vs. TrEMBL
Match: A0A0D2VBS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G178100 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.6e-65
Identity = 151/284 (53.17%), Postives = 180/284 (63.38%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGGQHG 61
           Q LT HY + +G+GPEIY+KR DLNH GAH  NNAIAQ MIAKRMGR+S+VAATG GQHG
Sbjct: 62  QRLTNHYNNSEGEGPEIYLKRGDLNHGGAHKRNNAIAQAMIAKRMGRKSIVAATGAGQHG 121

Query: 62  VATATACVKHKLECTFSWALKI-SRSNLPMLMVGPHPCPEMVRGFQSVIGKETRRQAMEK 121
           VATA A      E   +W   + ++  L    VGPHPCP MVR FQS+IGKETR+QAMEK
Sbjct: 122 VATAAAYASS--EAIRAWVGNLETKYYLAGTTVGPHPCPSMVREFQSIIGKETRKQAMEK 181

Query: 122 WGGLPEVLVACIGSGSNALGLFNEF-KEEDVRLIGVEAAGIG--SERH--------DDVN 181
           W           GSGSNALGLF+EF  +EDVRLIGVEAAG G  S +H         D+ 
Sbjct: 182 W-----------GSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHVATLTRGDVDLY 241

Query: 182 HGNLSDILKHAEGSIFNRPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAH 241
           HG + ++L+  EG I    SI           V  ++  L ET   E HT  DE A+  +
Sbjct: 242 HGAMRNLLQDEEGQILGPHSIGVGY-------VGPEVSFLKETGWAEFHTATDEAAVATY 301

Query: 242 KRVYELEGINPPFEAAHAFAYLDKLSPTLSDGWKVVVNCSGRGD 274
            R+  LEGI P  EA+HA A+L+KL PTL +G KVVVN SGRGD
Sbjct: 302 IRLCHLEGIFPALEASHALAFLEKLCPTLPNGTKVVVNISGRGD 325

[Close]
BLAST of Cp4.1LG09g09040 vs. TrEMBL
Match: U5GUH6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44620g PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 146/327 (44.65%), Postives = 190/327 (58.10%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGG--- 61
           + LT+HYK   G+GP IY+KREDLNH GAH +NNAI QV++AKR+G++ ++A TG G   
Sbjct: 144 ERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAIGQVLLAKRLGKQRIIAETGAGQHG 203

Query: 62  ---------------------------------------QHGVATATACVKHKL-ECTFS 121
                                                    GV + TA +K    E    
Sbjct: 204 VATATVCARFGFPCVVYMGAQDMERQSLNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 263

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIG ETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 264 WVTNVETTHYILGSVAGPHPFPMMVREFHRVIGIETRKQALEKWGGKPDVLVACVGGGSN 323

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF++F K++DVRLIGVEAAG+G  S +H          V HG +S +L+  +G I  
Sbjct: 324 AMGLFDDFIKDKDVRLIGVEAAGLGVDSGKHAATLTKGEVGVLHGAMSYLLQDEDGQIIE 383

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E ++V DEEA++A KR+  LEGI P  E +H
Sbjct: 384 PHSISAG---LDYPGVGPEHSFLKDKGRAEYYSVTDEEALDAFKRLSRLEGIIPALETSH 443

[Close]
BLAST of Cp4.1LG09g09040 vs. TrEMBL
Match: Q5KT13_9CARY (Tryptophan synthase beta subunit OS=Persicaria tinctoria PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 9.1e-61
Identity = 142/327 (43.43%), Postives = 190/327 (58.10%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAA------- 61
           + LT+HYK   G+GP+IY+KREDLNH GAH +NNA+AQ ++AKR+G+  ++A        
Sbjct: 139 ERLTEHYKRPNGEGPQIYLKREDLNHTGAHKINNAVAQALLAKRLGKTRIIAETGAGQHG 198

Query: 62  -----------------------------------TGGGQHGVATATACVKHKL-ECTFS 121
                                               G    GV + TA +K    E    
Sbjct: 199 VATATVCARFGLECIVYMGAQDMERQSLNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 258

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 259 WVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSN 318

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF  ++DVRLIGVEAAG G  S +H          V HG +S +L+  +G +  
Sbjct: 319 AMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQVIE 378

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E +++ DEEA+EA +R+  LEGI P  E +H
Sbjct: 379 PHSISAG---LDYPGVGPEHSFLKDMKRAEYYSITDEEALEAFRRLSRLEGIIPALETSH 438

[Close]
BLAST of Cp4.1LG09g09040 vs. TrEMBL
Match: M5WTG6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005257mg PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-60
Identity = 143/327 (43.73%), Postives = 188/327 (57.49%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAA------- 61
           + LT+HYK   G+GP +Y+KREDLNH GAH +NNA+AQ ++AK++G++ ++A        
Sbjct: 135 ERLTEHYKRPNGEGPHVYLKREDLNHTGAHKINNAVAQALLAKKLGKKRIIAETGAGQHG 194

Query: 62  -----------------------------------TGGGQHGVATATACVKHKL-ECTFS 121
                                               G     V + TA +K    E    
Sbjct: 195 VATATVCARFGLQCIIYMGAQDMERQSLNVFRMRLLGAEVRPVHSGTATLKDATSEAIRD 254

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIG+ETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 255 WVTNVETTHYILGSVAGPHPYPMMVRDFHKVIGRETRKQALEKWGGKPDVLVACVGGGSN 314

Query: 182 ALGLFNEFKEE-DVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF E+ DVRLIGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 315 AMGLFHEFVEDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIVE 374

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +T R E +++ DEEA+EA KR+  LEGI P  E +H
Sbjct: 375 PHSISAG---LDYPGVGPEHSFLKDTQRAEYYSITDEEALEAFKRLSRLEGIIPALETSH 434

[Close]
BLAST of Cp4.1LG09g09040 vs. TrEMBL
Match: B9I0B9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s13930g PE=3 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.6e-60
Identity = 144/327 (44.04%), Postives = 189/327 (57.80%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAA------- 61
           + LT+HYK   G+GP IY+KREDLNH GAH +NNA+ QV++AKR+G++ ++A        
Sbjct: 137 ERLTEHYKRPSGEGPHIYLKREDLNHTGAHKINNAVGQVLLAKRLGKQRIIAETGAGQHG 196

Query: 62  -----------------------------------TGGGQHGVATATACVKHKL-ECTFS 121
                                               G    GV + TA +K    E    
Sbjct: 197 VATATVCARFGLPCVVYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 256

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIG ETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 257 WVTNVETTHYILGSVAGPHPFPMMVREFHRVIGIETRKQALEKWGGKPDVLVACVGGGSN 316

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF K++DVRLIGVEAAG+G  S +H          V HG +S +L+  +G I  
Sbjct: 317 AMGLFDEFIKDKDVRLIGVEAAGLGIDSGKHAATLTKGEVGVLHGAMSYLLQDEDGQIIE 376

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E ++V D+EA++A KR+  LEGI P  E +H
Sbjct: 377 PHSISAG---LDYPGVGPEHSFLKDKGRAEYYSVTDQEALDAFKRLSRLEGIIPALETSH 436

[Close]
BLAST of Cp4.1LG09g09040 vs. TAIR10
Match: AT4G27070.1 (AT4G27070.1 tryptophan synthase beta-subunit 2)

HSP 1 Score: 234.6 bits (597), Expect = 7.4e-62
Identity = 142/327 (43.43%), Postives = 188/327 (57.49%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAA------- 61
           + LT+HY+ + G+GP IY+KREDLNH GAH +NNA+AQ ++AKR+G++ ++A        
Sbjct: 140 ERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHG 199

Query: 62  -----------------------------------TGGGQHGVATATACVKHKL-ECTFS 121
                                               G    GV + TA +K    E    
Sbjct: 200 VATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 259

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETR+QAMEKWGG P+VLVAC+G GSN
Sbjct: 260 WVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSN 319

Query: 182 ALGLFNEFKEE-DVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF ++ +VR+IGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 320 AMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIE 379

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E  +V DEEA+EA KRV  LEGI P  E +H
Sbjct: 380 PHSISAG---LDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSH 439

[Close]
BLAST of Cp4.1LG09g09040 vs. TAIR10
Match: AT5G54810.1 (AT5G54810.1 tryptophan synthase beta-subunit 1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-60
Identity = 141/327 (43.12%), Postives = 188/327 (57.49%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMG-------------- 61
           + LT+HY+ + G+GP IY+KREDLNH GAH +NNA+AQ ++AKR+G              
Sbjct: 135 ERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHG 194

Query: 62  ------------------------RRSV----VAATGGGQHGVATATACVKHKL-ECTFS 121
                                   R+++    +   G    GV + TA +K    E    
Sbjct: 195 VATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 254

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 255 WVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSN 314

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF  + +VR+IGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 315 AMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIE 374

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +     +  R E +++ DEEA+EA KRV  LEGI P  E +H
Sbjct: 375 PHSISAG---LDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSH 434

[Close]
BLAST of Cp4.1LG09g09040 vs. TAIR10
Match: AT5G28237.1 (AT5G28237.1 Pyridoxal-5'-phosphate-dependent enzyme family protein)

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-51
Identity = 109/193 (56.48%), Postives = 135/193 (69.95%), Query Frame = 1 

Query: 92  MVGPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSNALGLFNEF-KEEDV 151
           +VGPHPCP +VR FQSVIGKETRRQA + WGG P+VLVAC+GSGSNALGLF+EF  +EDV
Sbjct: 260 VVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACVGSGSNALGLFHEFVGDEDV 319

Query: 152 RLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFNRPSISAALEDLDHL 211
           RL+GVEAAG+G  S +H          V HG++S +L+  +G I    S+   LE   + 
Sbjct: 320 RLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQGQILKPHSVGVGLE---YP 379

Query: 212 KVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAHAFAYLDKLSPTLSD 271
            V  ++  + ET R E +T  DEEA++A  R+  LEGI P  EA+HA A+LDKL PTL D
Sbjct: 380 GVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGIIPALEASHALAFLDKLVPTLRD 439

Query: 272 GWKVVVNCSGRGD 274
           G KVVVNCSGRGD
Sbjct: 440 GAKVVVNCSGRGD 449

[Close]
BLAST of Cp4.1LG09g09040 vs. NCBI nr
Match: gi|727440065|ref|XP_010501430.1| (PREDICTED: tryptophan synthase beta chain 1-like [Camelina sativa])

HSP 1 Score: 258.8 bits (660), Expect = 1.0e-65
Identity = 160/328 (48.78%), Postives = 199/328 (60.67%), Query Frame = 1 

Query: 4   LTKHYKDKK---GKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGGQH 63
           LT+HYK+     G GPEIY+KREDL+HCG+H +NNA+AQ MIA+R+G   VVAATG GQH
Sbjct: 126 LTEHYKNIARTIGGGPEIYLKREDLSHCGSHKINNALAQAMIARRLGCSRVVAATGAGQH 185

Query: 64  GVATATA-------C-------------------------VKH--KLECTF----SWALK 123
           GVATA A       C                         +KH   +E TF    S A++
Sbjct: 186 GVATAAACAKISLGCTVYMGATDIEKQLVLSIKYNDSNTRIKHVKSVEGTFKDASSEAIR 245

Query: 124 ISRSNLPML------MVGPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGS 183
               NL         +VGPHPCP MVR FQSVIGKETRRQA + WGG P+VLVAC+GSGS
Sbjct: 246 HWVENLDSTYFLLGTVVGPHPCPIMVREFQSVIGKETRRQANQLWGGNPDVLVACLGSGS 305

Query: 184 NALGLFNEF-KEEDVRLIGVEAAGIGSER----------HDDVNHGNLSDILKHAEGSIF 243
            ALGLF+EF  +EDVRL+GVEAAG+G +           H  V HG++S +L+  +G I 
Sbjct: 306 TALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAVGHVGVYHGSMSYLLQDDQGQIV 365

Query: 244 NRPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAA 274
              S+   LE   +  V  ++  L ET R E +T  D+EA++A   +  LEGI P  E +
Sbjct: 366 KPHSVGVGLE---YPGVGPEISFLKETGRGEFYTATDQEAIQACMLLSRLEGIIPALETS 425

[Close]
BLAST of Cp4.1LG09g09040 vs. NCBI nr
Match: gi|763800200|gb|KJB67155.1| (hypothetical protein B456_010G178100 [Gossypium raimondii])

HSP 1 Score: 256.5 bits (654), Expect = 5.1e-65
Identity = 151/284 (53.17%), Postives = 180/284 (63.38%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGGQHG 61
           Q LT HY + +G+GPEIY+KR DLNH GAH  NNAIAQ MIAKRMGR+S+VAATG GQHG
Sbjct: 62  QRLTNHYNNSEGEGPEIYLKRGDLNHGGAHKRNNAIAQAMIAKRMGRKSIVAATGAGQHG 121

Query: 62  VATATACVKHKLECTFSWALKI-SRSNLPMLMVGPHPCPEMVRGFQSVIGKETRRQAMEK 121
           VATA A      E   +W   + ++  L    VGPHPCP MVR FQS+IGKETR+QAMEK
Sbjct: 122 VATAAAYASS--EAIRAWVGNLETKYYLAGTTVGPHPCPSMVREFQSIIGKETRKQAMEK 181

Query: 122 WGGLPEVLVACIGSGSNALGLFNEF-KEEDVRLIGVEAAGIG--SERH--------DDVN 181
           W           GSGSNALGLF+EF  +EDVRLIGVEAAG G  S +H         D+ 
Sbjct: 182 W-----------GSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHVATLTRGDVDLY 241

Query: 182 HGNLSDILKHAEGSIFNRPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAH 241
           HG + ++L+  EG I    SI           V  ++  L ET   E HT  DE A+  +
Sbjct: 242 HGAMRNLLQDEEGQILGPHSIGVGY-------VGPEVSFLKETGWAEFHTATDEAAVATY 301

Query: 242 KRVYELEGINPPFEAAHAFAYLDKLSPTLSDGWKVVVNCSGRGD 274
            R+  LEGI P  EA+HA A+L+KL PTL +G KVVVN SGRGD
Sbjct: 302 IRLCHLEGIFPALEASHALAFLEKLCPTLPNGTKVVVNISGRGD 325

[Close]
BLAST of Cp4.1LG09g09040 vs. NCBI nr
Match: gi|729356378|ref|XP_010545199.1| (PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Tarenaya hassleriana])

HSP 1 Score: 247.3 bits (630), Expect = 3.1e-62
Identity = 147/327 (44.95%), Postives = 192/327 (58.72%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGG--- 61
           + LT+HY+ + G+GPEIY+KREDLNH GAH +NNA+AQ ++AKR+G++ ++A TG G   
Sbjct: 139 ERLTEHYRRENGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHG 198

Query: 62  ---------------------------------------QHGVATATACVKHKL-ECTFS 121
                                                    GV + TA +K    E    
Sbjct: 199 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 258

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F +VIGKETRRQA+EKWGG P+VLVAC+G GSN
Sbjct: 259 WVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGTPDVLVACVGGGSN 318

Query: 182 ALGLFNEFKEE-DVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF+EF ++ DVR+IGVEAAG G  S +H          V HG +S +L+  +G I  
Sbjct: 319 AMGLFHEFVDDSDVRMIGVEAAGFGLNSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIE 378

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E ++V D+EA+EA KRV  LEGI P  E +H
Sbjct: 379 PHSISAG---LDYPGVGPEHSFLKDVGRAEYYSVTDDEALEAFKRVSRLEGIIPALETSH 438

[Close]
BLAST of Cp4.1LG09g09040 vs. NCBI nr
Match: gi|566154874|ref|XP_006370659.1| (hypothetical protein POPTR_0001s44620g [Populus trichocarpa])

HSP 1 Score: 245.0 bits (624), Expect = 1.5e-61
Identity = 146/327 (44.65%), Postives = 190/327 (58.10%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGG--- 61
           + LT+HYK   G+GP IY+KREDLNH GAH +NNAI QV++AKR+G++ ++A TG G   
Sbjct: 144 ERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAIGQVLLAKRLGKQRIIAETGAGQHG 203

Query: 62  ---------------------------------------QHGVATATACVKHKL-ECTFS 121
                                                    GV + TA +K    E    
Sbjct: 204 VATATVCARFGFPCVVYMGAQDMERQSLNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 263

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIG ETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 264 WVTNVETTHYILGSVAGPHPFPMMVREFHRVIGIETRKQALEKWGGKPDVLVACVGGGSN 323

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF++F K++DVRLIGVEAAG+G  S +H          V HG +S +L+  +G I  
Sbjct: 324 AMGLFDDFIKDKDVRLIGVEAAGLGVDSGKHAATLTKGEVGVLHGAMSYLLQDEDGQIIE 383

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E ++V DEEA++A KR+  LEGI P  E +H
Sbjct: 384 PHSISAG---LDYPGVGPEHSFLKDKGRAEYYSVTDEEALDAFKRLSRLEGIIPALETSH 443

[Close]
BLAST of Cp4.1LG09g09040 vs. NCBI nr
Match: gi|743930117|ref|XP_011009301.1| (PREDICTED: tryptophan synthase beta chain 1 [Populus euphratica])

HSP 1 Score: 244.6 bits (623), Expect = 2.0e-61
Identity = 146/327 (44.65%), Postives = 190/327 (58.10%), Query Frame = 1 

Query: 2   QSLTKHYKDKKGKGPEIYIKREDLNHCGAHMMNNAIAQVMIAKRMGRRSVVAATGGG--- 61
           + LT+HYK   G+GP IY+KREDLNH GAH +NNAI QV++AKR+G++ ++A TG G   
Sbjct: 144 ERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAIGQVLLAKRLGKQRIIAETGAGQHG 203

Query: 62  ---------------------------------------QHGVATATACVKHKL-ECTFS 121
                                                    GV + TA +K    E    
Sbjct: 204 VATATVCARFGFPCVVYMGAQDMERQSLNVFRMRLLGAEVRGVHSGTATLKDATSEAIRD 263

Query: 122 WALKISRSNLPMLMV-GPHPCPEMVRGFQSVIGKETRRQAMEKWGGLPEVLVACIGSGSN 181
           W   +  ++  +  V GPHP P MVR F  VIG ETR+QA+EKWGG P+VLVAC+G GSN
Sbjct: 264 WVTNVETTHYILGSVAGPHPFPMMVREFHRVIGIETRKQALEKWGGKPDVLVACVGGGSN 323

Query: 182 ALGLFNEF-KEEDVRLIGVEAAGIG--SERHD--------DVNHGNLSDILKHAEGSIFN 241
           A+GLF++F K++DVRLIGVEAAG+G  S +H          V HG +S +L+  +G I  
Sbjct: 324 AMGLFDDFIKDKDVRLIGVEAAGLGVDSGKHAATLTKGEVGVLHGAMSYLLQDEDGQIIE 383

Query: 242 RPSISAALEDLDHLKVLIDLKHLNETHRVEVHTVQDEEAMEAHKRVYELEGINPPFEAAH 274
             SISA    LD+  V  +   L +  R E ++V DEEA++A KR+  LEGI P  E +H
Sbjct: 384 PHSISAG---LDYPGVGPEHSFLKDKGRAEYYSVTDEEALDAFKRLSRLEGIIPALETSH 443

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRBP2_ARATH1.3e-6043.43Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 ... [more]
TRPB2_MAIZE8.5e-6043.12Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 P... [more]
TRPB1_ARATH3.2e-5943.12Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 ... [more]
TRPB_CAMAC4.2e-5943.43Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB ... [more]
TRPB1_MAIZE9.4e-5943.43Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1[more]
BLAST of Cp4.1LG09g09040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2VBS2_GOSRA3.6e-6553.17Uncharacterized protein OS=Gossypium raimondii GN=B456_010G178100 PE=4 SV=1[more]
U5GUH6_POPTR1.1e-6144.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44620g PE=3 SV=1[more]
Q5KT13_9CARY9.1e-6143.43Tryptophan synthase beta subunit OS=Persicaria tinctoria PE=2 SV=1[more]
M5WTG6_PRUPE1.2e-6043.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005257mg PE=3 SV=1[more]
B9I0B9_POPTR1.6e-6044.04Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s13930g PE=3 SV=2[more]
BLAST of Cp4.1LG09g09040 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27070.17.4e-6243.43 tryptophan synthase beta-subunit 2[more]
AT5G54810.11.8e-6043.12 tryptophan synthase beta-subunit 1[more]
AT5G28237.12.0e-5156.48 Pyridoxal-5'-phosphate-dependent enzyme family protein[more]
BLAST of Cp4.1LG09g09040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|727440065|ref|XP_010501430.1|1.0e-6548.78PREDICTED: tryptophan synthase beta chain 1-like [Camelina sativa][more]
gi|763800200|gb|KJB67155.1|5.1e-6553.17hypothetical protein B456_010G178100 [Gossypium raimondii][more]
gi|729356378|ref|XP_010545199.1|3.1e-6244.95PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Tarenaya hassleriana... [more]
gi|566154874|ref|XP_006370659.1|1.5e-6144.65hypothetical protein POPTR_0001s44620g [Populus trichocarpa][more]
gi|743930117|ref|XP_011009301.1|2.0e-6144.65PREDICTED: tryptophan synthase beta chain 1 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001926PLP-dep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09040.1Cp4.1LG09g09040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymePFAMPF00291PALPcoord: 90..270
score: 2.8E-16coord: 13..77
score: 3.7
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymeunknownSSF53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 12..273
score: 2.62
NoneNo IPR availableGENE3DG3DSA:3.40.50.1100coord: 2..76
score: 7.7E-26coord: 94..273
score: 1.4
NoneNo IPR availablePANTHERPTHR10314SER/THR DEHYDRATASE, TRP SYNTHASEcoord: 2..273
score: 6.9E
NoneNo IPR availablePANTHERPTHR10314:SF123TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEINcoord: 2..273
score: 6.9E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09040Cucurbita pepo (Zucchini)cpecpeB019
Cp4.1LG09g09040Cucurbita pepo (Zucchini)cpecpeB044
Cp4.1LG09g09040Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG09g09040Cucurbita pepo (Zucchini)cpecpeB050
Cp4.1LG09g09040Cucumber (Gy14) v1cgycpeB0031
Cp4.1LG09g09040Cucumber (Gy14) v1cgycpeB0156
Cp4.1LG09g09040Cucurbita maxima (Rimu)cmacpeB212
Cp4.1LG09g09040Cucurbita maxima (Rimu)cmacpeB414
Cp4.1LG09g09040Cucurbita maxima (Rimu)cmacpeB652
Cp4.1LG09g09040Cucurbita maxima (Rimu)cmacpeB859
Cp4.1LG09g09040Cucurbita moschata (Rifu)cmocpeB182
Cp4.1LG09g09040Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09040Cucurbita moschata (Rifu)cmocpeB602
Cp4.1LG09g09040Cucurbita moschata (Rifu)cmocpeB799
Cp4.1LG09g09040Wild cucumber (PI 183967)cpecpiB047
Cp4.1LG09g09040Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g09040Cucumber (Chinese Long) v2cpecuB052
Cp4.1LG09g09040Bottle gourd (USVL1VR-Ls)cpelsiB022
Cp4.1LG09g09040Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g09040Watermelon (Charleston Gray)cpewcgB031
Cp4.1LG09g09040Watermelon (Charleston Gray)cpewcgB036
Cp4.1LG09g09040Watermelon (97103) v1cpewmB025
Cp4.1LG09g09040Watermelon (97103) v1cpewmB043
Cp4.1LG09g09040Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g09040Melon (DHL92) v3.5.1cpemeB045
Cp4.1LG09g09040Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09040Cucumber (Gy14) v2cgybcpeB707
Cp4.1LG09g09040Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g09040Melon (DHL92) v3.6.1cpemedB053
Cp4.1LG09g09040Silver-seed gourdcarcpeB0694
Cp4.1LG09g09040Silver-seed gourdcarcpeB0911
Cp4.1LG09g09040Silver-seed gourdcarcpeB1218
Cp4.1LG09g09040Silver-seed gourdcarcpeB1287
Cp4.1LG09g09040Silver-seed gourdcarcpeB1395
Cp4.1LG09g09040Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g09040Cucumber (Chinese Long) v3cpecucB0054
Cp4.1LG09g09040Wax gourdcpewgoB0033
Cp4.1LG09g09040Wax gourdcpewgoB0047
Cp4.1LG09g09040Wax gourdcpewgoB0041
Cp4.1LG09g09040Wild cucumber (PI 183967)cpecpiB025