Cp4.1LG09g06320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g06320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSphere organelles family protein
LocationCp4.1LG09 : 3667989 .. 3672706 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCTATCAAGGTACGACTCTAGGACGAATGAAAAGATTGAAAAGGGAATTTTGACTTTGTTATTTCCTCTTGTTGGAATTTGGCAACAGAAAGATGAAATATTTTGTAACTAGATCCATCCAAGGATTTTGAATTCTTCTTTCAGAAACTTAGTATTAAAGATTCAATCGTCTTATCATTTATAGATAAAACCAACAACTTAAAAGTCAGTACATGAGAGAGAGTTTCTTGTGTTCTCTTCTTTTCTTGTCAGGGTCCTAGTAGAAGTACTCGTCGTAAAAAGGCAAAAAGACATTGGTTGAGGGAAAGAGCTCAAAATGAGGTATATTGACGCTGTAAATGGTAGTTTTTCATTGTTTATTGTATTTTGTCATGGGGGTAAAATTCCATCTTTACTTCAAATTTCTACCATGTGTCAATTCTTTATTTTATCATTTTGAATGCGAAAAGCCAAAGTTCTACTAGGTCTCATTATACATATATTTCAGTGTGTATGTCCTGAACTGACAAATATGCTCGTGTAAAGTTAGAATTTGCATTGGCAAATATGCCCATAATTGTATTGAGGTGTGGTCACCTGATTCCTTTATTTTTGCAGCAACAGCAGCTGTTATTGGAAACAAGTGTTGATCAAGGACCTAGTCAGAATGATGATGCTGATATGGATGATGACACTGTTCCTGTGGTAGTTAAGCCCGGACACATTCGCTTTGAGCCAGTTGGAAAAGGTCTGATGATTTCTTTCTATTTTAGACACAGTGTGAGAAAGTGTGAATGTGTGAGATCCCACATCGTTTGGTCAGAAAGTCTCTCCCTAGCAAACACGTTTTAAAAACCTTGAGGGGAAGGCCTGAAGGGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGGACCGTTACAAATGGTATCAGAGCCAGACACCGAGCGATGTGCCAGCGTGGACGCTGAGCCTTGAAGGAGAGCGAAGACCAAGCAGTGTGCCAATGACAACGCTGGGCCCCGAAGGGGGGTGGATTGTGAGATCCCACATTGATTGGAGAAAGGAACGAGTGCCATCGAGGGCGCTGGGCTCCGAAGGGGGGTGGATTGTGAGATCCCCCACATCGACTGAAGAGGGGAACAGAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGTGGGGAAGTCCGAAAGGGAAAGCCCAAAGCGGACAAAATTTGGTAGCGGTGGGCTTGGACCGTTACAGGAAGTGTCTTGCCCGTTATATTTGTTTGATTTTATATTTTTACAATATGGATCTCACAATTATGAATTCCCCGGTTTCTCTTATATCATTACAGTGGCTGCGGATCAGACTGAAAAACAACCAAACCACTTGCCTTTGGTATCCATACTGTTCCATTGTCTTATGCCGCCTCTTGATGTTCACATTAGCCAATTATTATTGTTTTGTTATGCTTTAGGAGACATTACACTGGAATGGCATAACCAACAAGAAGAAGGGTCAGAAATGGGGCAAAGAGAAAACTTCATCTTTGAATAGGAACAATTCTAACAATCATACAGACGAACCTCTTCGGTTGCCTACTACTGAAGCTGAGCAACATACAATTTCAGCACCTGTAGTCGGTCTCATAAATTTTGATGAACTTGAACCGTGCAGTGGCTTGCCTCAGGTTTGGCTTCCTCAGTTTGATTAATCTGCTTGCTTTATTACGTTTTTAGTTGGGCATGAATGGCTTGCAAAGTGGAAGGATCAAGTCATGTTAACAGTTTCCATCAAATTAAATGTTTATCATTTCCCAAGTCTTTAACTTTTTCTTTAGGGCCAATTTCACAAGTCACGAAGTTTATATAGAATTTTATAGAGGCAGCAACAGGTGTTACCTATGTAGTTATAGTATTAATTATTAAATTTTATTCTATATATAATTTGTGTTTTATTTATTGCAGAAAGGTGATGTAGTTGCATATCGTTTGATTGAGTTATCATCAACCTGGACACCTGAGATTTCCTCCTTCCGAGTAAAATTCGTCTTCACTGAAATTTCCTGTCAGATTCCCTATCTCCACAGCCTGTATGTTATTCTATTTCTTTTTCTTGTTTCAGGCTGGTAAAGTATCATGGTACGACACTGAATCCAATCGAATTATGCTAAATCCAGTTCCAGAATACCCATTACCTGTTAAAAAGGAGATGGACGAGGATTCTGCATTACACTTAGATTCAACCCCATATGGTGAAAATGGCTCTTTAAAGGTATTAGTGCCAAGCACAGTCTTTGGTTTGCCATCACCCAAATCATTTTTTCTCTCCGATTTGTCACATAGTGAAGTTATTTTATGTATATATATATATCAACTACCGGACTATAGTTTATGTTCACCTGTTTTCTTTGTAAGCAATATTATTGTTATCTATAGGAACTACTAATTGATACACATACATGCCTAATCTGTTGCTTATCCTTGATTACAACGAACTGACAAATAGAGGTCTTCAACAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAGGCAAGGAAGCTTGGATTCTTCAAAAACTATGGTTAACCAGGAAAACACTTCTGCTAAACAAAGTGCAGAAAGTTCCATATTCGCCCATAGCATCGGAAATGCCAACGACACTAAACAAGGTATCCATTATAGTTTGTAGCCATAGTAGGATTAGTTTACTGGGAGCTGGTTACGTTTAATGGGCTTATTTTATAATTGGTCTTCAGGTAATGGAAAAGTAACTGCGTGGGATGAAATCAGCGAGGCTCTGAGTGCAAAGAAAGCTGAACTTACTAAGAATGATGGTTGGAATCGAGAAGAAAGTTCAGGAAGGAGGCCAGATGGTAGGAATCAAGAAGAAAGTTCAGGAAAAAGGTCAAGGTCCTGTAGGGCACTCAGAGGCAGCGCCCTTGGTCCAATAGTGGCTCTATTAAGAGCTCGTAATGAAATCTAAGAAAAATCTTCTGGGTCCAAACATTGTCCCTGTATTTTTGCTGCTCAGAAGTCAGAAGATACGCTCTTGTATAGTTTGGAATCTGTTGGTGCTAATTTACTGTGATAGTGCTGCCTTCTACCGTCAAGCTCAGACTCGTTAGTGAACTTTGGTTAAAGGCATTTTTTGGTTGGAATTAGGTGACAATAGGATTGCATGCCAGACCAACTAGACGTCCTGCACTGCCAAATCTATATAAGCTGTTGATGATGGAGCTTCCAAGGATGTTATCTATAGTTTTGTCACAATGGAAAGCATCTCTCTCAAATTATAAATGCATGGGAATTTCGGTAGCTTCAACATTTATATCTCGTGAAACTATTTAAATATTCTAATTAGAAATTTATCTTATTCAGTGTTTAAAAAAATAGCATCTGAAATTTTCCCTCGACAACAAAGGGAACTAATCGCAAGTCTAATTGAATTTTTTAATCTAACTTCTACTTTCTTCAAGAGCAGGTGAAAACACTGATTACTCTGTAAAACTCAAGACTATTGATGGCGTTTTTGTCTATACATGATCTCTGGAGGATTGGATTCTCTACGTATATATATACATCTCACAAGCAGCTCACATCAGTTCTGCCGTGGATGCCAGTTTTACCTTTTGGAAGGCCTTCCGCTACAGTCCATCAAGTCTTCACCGACCACAGATCAACACATTCTGTTTTTTGAGGTAATGAATTGCTTATATGTGCAAGGAACTTCTCGGGCTCCTCACCTTCTCTTATTATCTGCACACATAGGATACTCCACAAAATGAGCTAAGGTACATAGTTTCAAAATAACATCAAAAGCAAAACTGTTCAAAACATGGAATTTGAGAGTTAAAATGACGATTAATCTACTAAGCTTATGTTGAATGATATGGCTACTAGTATAGAAATCCCAATATTTAGCAAGTCATGTAGAGGTTTTAGGTGTCACCCTCCAAGTTGCCTTCTATTGTGAGTTATGCAAGTAGATGGACTTGCTTTACTAGCAAATAAAACAGAGAAAGGAGGTGTCATTAGAAATTTACTATAAGCATGAAATATACACTTTTGAGATCCTCTGTTTCTAGGAAAACATTTTCCTCTCAGAAATAACATAAAAGATTGTCTCCCATTAGCTACTCAGTCTAGCATGTTGAGCAAACTATTTTCTCTATGAGAAGAGAACTTCTGAATAATTGTTTACGTACCTGTATTTTCGTATCTCTAGGAATTCCCTTATTGTTAATGAATATACGTCCGATCATCTCCCAGTGAAGATGTCCATCTTCATTGTCGTCACTCATTAGTTGACCGTCATCGTCTTTATGCAAAACTTCACTCCCCAGCCAGATAAATAAGTTGTTGTAGCCGTTTGAATCCAAATTTGTATCTGGTGCAAACAATATATACACTGATCTAGAATTGAGATTCCCGAATTGATTGATCTCCACTGTATTCATTGAAGGCCACTGGTAAAAAATTGGAGTTTCTGCTTCTGCAAACTTGTATTCTAATTCAGTGCAAGCCCCAAATCTATCAATGTCCAAATTTATATCTTTACTACTGCTTTTATTCTTGGATTGGCTGCACCCAGCTATCTCCAATGCATCGTTGTCTAAGTTGAGCAAAGAAAACGATGATGACCGAACTATTTTCCTCTGAACCTTGCAGGCTTCTTCAATGGAGGGCAGCAACATCCCAGGTGGAGGATGA

mRNA sequence

TTTGCTATCAAGGTACGACTCTAGGACGAATGAAAAGATTGAAAAGGGAATTTTGACTTTGTTATTTCCTCTTGTTGGAATTTGGCAACAGAAAGATGAAATATTTTGTAACTAGATCCATCCAAGGATTTTGAATTCTTCTTTCAGAAACTTAGTATTAAAGATTCAATCGTCTTATCATTTATAGATAAAACCAACAACTTAAAAGTCAGTACATGAGAGAGAGTTTCTTGTGTTCTCTTCTTTTCTTGTCAGGGTCCTAGTAGAAGTACTCGTCGTAAAAAGGCAAAAAGACATTGGTTGAGGGAAAGAGCTCAAAATGAGCAACAGCAGCTGTTATTGGAAACAAGTGTTGATCAAGGACCTAGTCAGAATGATGATGCTGATATGGATGATGACACTGTTCCTGTGGTAGTTAAGCCCGGACACATTCGCTTTGAGCCAGTTGGAAAAGTGGCTGCGGATCAGACTGAAAAACAACCAAACCACTTGCCTTTGGAGACATTACACTGGAATGGCATAACCAACAAGAAGAAGGGTCAGAAATGGGGCAAAGAGAAAACTTCATCTTTGAATAGGAACAATTCTAACAATCATACAGACGAACCTCTTCGGTTGCCTACTACTGAAGCTGAGCAACATACAATTTCAGCACCTGTAGTCGGTCTCATAAATTTTGATGAACTTGAACCGTGCAGTGGCTTGCCTCAGAAAGGTGATGTAGTTGCATATCGTTTGATTGAGTTATCATCAACCTGGACACCTGAGATTTCCTCCTTCCGAGCTGGTAAAGTATCATGGTACGACACTGAATCCAATCGAATTATGCTAAATCCAGTTCCAGAATACCCATTACCTGTTAAAAAGGAGATGGACGAGGATTCTGCATTACACTTAGATTCAACCCCATATGGTGAAAATGGCTCTTTAAAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAGGCAAGGAAGCTTGGATTCTTCAAAAACTATGGTTAACCAGGAAAACACTTCTGCTAAACAAAGTGCAGAAAGTTCCATATTCGCCCATAGCATCGGAAATGCCAACGACACTAAACAAGGTAATGGAAAAGTAACTGCGTGGGATGAAATCAGCGAGGCTCTGAGTGCAAAGAAAGCTGAACTTACTAAGAATGATGGTTGGAATCGAGAAGAAAGTTCAGGAAGGAGGCCAGATGGTAGGAATCAAGAAGAAAGTTCAGGAAAAAGGTCAAGGTCCTGTAGGGCACTCAGAGGCAGCGCCCTTGGTCCAATAGTGGCTCTATTAAGAGCTCGTAATGAAATCTAAGAAAAATCTTCTGGGTCCAAACATTGTCCCTGTATTTTTGCTGCTCAGAAGTCAGAAGATACGCTCTTGTATAGTTTGGAATCTGTTGGTGCTAATTTACTGTGATAGTGCTGCCTTCTACCGTCAAGCTCAGACTCGTTAGTGAACTTTGGTTAAAGGCATTTTTTGGTTGGAATTAGGTGACAATAGGATTGCATGCCAGACCAACTAGACGTCCTGCACTGCCAAATCTATATAAGCTGTTGATGATGGAGCTTCCAAGGATGTTATCTATAGTTTTGTCACAATGGAAAGCATCTCTCTCAAATTATAAATGCATGGGAATTTCGGTGAAAACACTGATTACTCTGTAAAACTCAAGACTATTGATGGCGTTTTTGTCTATACATGATCTCTGGAGGATTGGATTCTCTACGTATATATATACATCTCACAAGCAGCTCACATCAGTTCTGCCGTGGATGCCAGTTTTACCTTTTGGAAGGCCTTCCGCTACAGTCCATCAAGTCTTCACCGACCACAGATCAACACATTCTGTTTTTTGAGGCTTCTTCAATGGAGGGCAGCAACATCCCAGGTGGAGGATGA

Coding sequence (CDS)

ATGGATGATGACACTGTTCCTGTGGTAGTTAAGCCCGGACACATTCGCTTTGAGCCAGTTGGAAAAGTGGCTGCGGATCAGACTGAAAAACAACCAAACCACTTGCCTTTGGAGACATTACACTGGAATGGCATAACCAACAAGAAGAAGGGTCAGAAATGGGGCAAAGAGAAAACTTCATCTTTGAATAGGAACAATTCTAACAATCATACAGACGAACCTCTTCGGTTGCCTACTACTGAAGCTGAGCAACATACAATTTCAGCACCTGTAGTCGGTCTCATAAATTTTGATGAACTTGAACCGTGCAGTGGCTTGCCTCAGAAAGGTGATGTAGTTGCATATCGTTTGATTGAGTTATCATCAACCTGGACACCTGAGATTTCCTCCTTCCGAGCTGGTAAAGTATCATGGTACGACACTGAATCCAATCGAATTATGCTAAATCCAGTTCCAGAATACCCATTACCTGTTAAAAAGGAGATGGACGAGGATTCTGCATTACACTTAGATTCAACCCCATATGGTGAAAATGGCTCTTTAAAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAGGCAAGGAAGCTTGGATTCTTCAAAAACTATGGTTAACCAGGAAAACACTTCTGCTAAACAAAGTGCAGAAAGTTCCATATTCGCCCATAGCATCGGAAATGCCAACGACACTAAACAAGGTAATGGAAAAGTAACTGCGTGGGATGAAATCAGCGAGGCTCTGAGTGCAAAGAAAGCTGAACTTACTAAGAATGATGGTTGGAATCGAGAAGAAAGTTCAGGAAGGAGGCCAGATGGTAGGAATCAAGAAGAAAGTTCAGGAAAAAGGTCAAGGTCCTGTAGGGCACTCAGAGGCAGCGCCCTTGGTCCAATAGTGGCTCTATTAAGAGCTCGTAATGAAATCTAA

Protein sequence

MDDDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSLNRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGSLKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKVTAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPIVALLRARNEI
Homology
[Close]
BLAST of Cp4.1LG09g06320 vs. Swiss-Prot
Match: COIL_ARATH (Coilin OS=Arabidopsis thaliana GN=COIL PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 128/312 (41.03%), Postives = 193/312 (61.86%), Query Frame = 1 

Query: 3   DDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSL 62
           D+ VPV V+PGHIRF+P+        + +P    +E + WNG   KKKGQKWG EK+   
Sbjct: 326 DEVVPVEVRPGHIRFKPLAGTDEASLDSEPL---VENVLWNGNMTKKKGQKWGTEKSGFS 385

Query: 63  NRNNSNNHTDEPLRLPTTEAEQHTI-SAPVVGLINFDELEPCSGLPQKGDVVAYRLIELS 122
            R   + + D      T  AE  T+ + P    I++++L   +G  +KGDV+AYRLIEL+
Sbjct: 386 KRYAQDFNED----ATTQPAEAETLANCP----IDYEQLVAYTGSVKKGDVIAYRLIELT 445

Query: 123 STWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGSL 182
           S+WTPE+SSFR GK+S+YD +S  + L PV E+P+  K E D+D  +  D++ Y E+GSL
Sbjct: 446 SSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPIEKKTEEDDDFCMQPDTSLYKEDGSL 505

Query: 183 KIDFASLVDLRLIRQGSLDS---SKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGK 242
           +I+F++L+D+R ++  S DS   +K+ + + + SAK+   S     +        + NG+
Sbjct: 506 EIEFSALLDVRSVKTSSSDSAEVAKSALPEPDQSAKKPKLS-----ANKELQTPAKENGE 565

Query: 243 VTAWDEISEALSAKKAELTK-NDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALG 302
           V+ W+E+SEALSAKKA L++ N+GWN++ SS           S G  S S +ALRGSA+G
Sbjct: 566 VSPWEELSEALSAKKAALSQANNGWNKKGSS-----------SGG--SWSYKALRGSAMG 608

Query: 303 PIVALLRARNEI 310
           P++  LR++ EI
Sbjct: 626 PVMNYLRSQKEI 608

[Close]
BLAST of Cp4.1LG09g06320 vs. TrEMBL
Match: A0A0A0KTI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598010 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 6.0e-101
Identity = 201/293 (68.60%), Postives = 236/293 (80.55%), Query Frame = 1 

Query: 18  EPVGKVAADQT-EKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSLNRNNSNNHTDEPLR 77
           +  G++  DQ  +++ NH P ETLHWNGITNKKKGQKWGKEKT S  RNNSN+ + EPL+
Sbjct: 265 DTAGEIVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNDCSSEPLQ 324

Query: 78  LPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIELSSTWTPEISSFRAGKV 137
           L  +E EQ     PVVG I+FDEL P + LPQ+GD++AYRLIELSSTWTPEISSFRAGKV
Sbjct: 325 L-LSETEQPKTPVPVVGSIHFDELPPYTCLPQEGDLIAYRLIELSSTWTPEISSFRAGKV 384

Query: 138 SWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGSLKIDFASLVDLRLIRQ 197
           SWYDTESNRIML PVPEYPLPVKKE+DEDS L  D+TPYGE+GSLKIDFASLVDLR+IRQ
Sbjct: 385 SWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQ 444

Query: 198 GSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKVTAWDEISEALSAKKAEL 257
           G+LDSS+T VNQE TS KQ AESS   H+  +AN+T+QGNGKV+AWDEISEALSAKK EL
Sbjct: 445 GNLDSSRTAVNQEITS-KQIAESSKHVHNNVDANNTRQGNGKVSAWDEISEALSAKKVEL 504

Query: 258 TKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPIVALLRARNEI 310
           +KN+GW             NQE+SSG++S S RALRGSALGP +ALLR++ E+
Sbjct: 505 SKNNGW-------------NQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL 542

[Close]
BLAST of Cp4.1LG09g06320 vs. TrEMBL
Match: B9SVN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0794230 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.1e-69
Identity = 150/312 (48.08%), Postives = 211/312 (67.63%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTS 60
           ++DD VP+V++PGHIRFEP+ K  A+Q E+Q  H+P+E  HWNGIT+KKKGQKWGKEK +
Sbjct: 317 LEDDIVPIVIRPGHIRFEPLSKAGANQAEQQ-THIPVEIFHWNGITSKKKGQKWGKEKAT 376

Query: 61  SLNRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIEL 120
           S  RN+  N + E      +E  +     PV   ++F++LE  + LP++GDV+AYRLIEL
Sbjct: 377 SYKRNDHRNVSQE-----CSEVRKDG-GRPVYDRVDFEKLEFYTTLPKEGDVIAYRLIEL 436

Query: 121 SSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGS 180
           S +WTPEISS+R GK+S YD +SNR+ L PVP YP+  K+  D+ SA   ++ PY ++GS
Sbjct: 437 SPSWTPEISSYRVGKISRYDMQSNRVRLVPVPGYPVTHKETGDDASAAPSETIPYAKDGS 496

Query: 181 LKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNAND---TKQGNG 240
           L I+FASL+++RL+ +G+ +S K++  + +    +  ++     S  N N+   + Q NG
Sbjct: 497 LWIEFASLIEVRLVTRGNSNSVKSVAGEIDKVPVRDQDNRTGCRS-NNGNESHVSAQENG 556

Query: 241 KVTAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALG 300
           K  AW+EISEAL+AKKAEL + D WN+  SSGRRP              S +ALRGSALG
Sbjct: 557 KGNAWEEISEALNAKKAELAQEDNWNKPGSSGRRP-------------WSYKALRGSALG 607

Query: 301 PIVALLRARNEI 310
           P +ALLRA+NE+
Sbjct: 617 PTMALLRAQNEL 607

[Close]
BLAST of Cp4.1LG09g06320 vs. TrEMBL
Match: A0A0D2NQ02_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.9e-65
Identity = 148/317 (46.69%), Postives = 211/317 (66.56%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTS 60
           ++D+ VP+VV+PGHIRFEP+ +  A+Q   Q + + ++T  WNGIT+KKKGQKWG EKT 
Sbjct: 337 VEDNVVPIVVRPGHIRFEPLEEEDAEQAI-QHSQISVKTFQWNGITSKKKGQKWGMEKTP 396

Query: 61  SLNRNNSN-NHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIE 120
            L RN++N +H        ++E       A V   ++FD+L P S LP++GD+VAYRL+E
Sbjct: 397 FLRRNDNNFSHV-------SSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVE 456

Query: 121 LSSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENG 180
           LSSTWTPE+ SFR G++S YD ESNRIML PVP YP    K+ DE+++   D++ YGE+G
Sbjct: 457 LSSTWTPELCSFRVGEISHYDAESNRIMLTPVPGYPNASGKKTDEEASELPDTSLYGEDG 516

Query: 181 SLKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAE-------SSIFAHSIGNANDT 240
           SL+ID++SL+D+RL++ G+ +++  + +  N +  Q+ +        S  A+S+  A+  
Sbjct: 517 SLEIDYSSLIDVRLVKLGNSNATIAIADDNNENYAQNQDVLTRQPNGSKEANSVSAASPA 576

Query: 241 KQGNGKVTAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALR 300
            Q NG V  W+EI++ALSAKKAEL+K DGW+R +SSGR              + S RALR
Sbjct: 577 -QANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGR-------------SAWSFRALR 631

Query: 301 GSALGPIVALLRARNEI 310
            SALGP +A LRA+N I
Sbjct: 637 RSALGPTMAFLRAQNGI 631

[Close]
BLAST of Cp4.1LG09g06320 vs. TrEMBL
Match: A0A0D2QFC4_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.9e-65
Identity = 148/317 (46.69%), Postives = 211/317 (66.56%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTS 60
           ++D+ VP+VV+PGHIRFEP+ +  A+Q   Q + + ++T  WNGIT+KKKGQKWG EKT 
Sbjct: 406 VEDNVVPIVVRPGHIRFEPLEEEDAEQAI-QHSQISVKTFQWNGITSKKKGQKWGMEKTP 465

Query: 61  SLNRNNSN-NHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIE 120
            L RN++N +H        ++E       A V   ++FD+L P S LP++GD+VAYRL+E
Sbjct: 466 FLRRNDNNFSHV-------SSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVE 525

Query: 121 LSSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENG 180
           LSSTWTPE+ SFR G++S YD ESNRIML PVP YP    K+ DE+++   D++ YGE+G
Sbjct: 526 LSSTWTPELCSFRVGEISHYDAESNRIMLTPVPGYPNASGKKTDEEASELPDTSLYGEDG 585

Query: 181 SLKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAE-------SSIFAHSIGNANDT 240
           SL+ID++SL+D+RL++ G+ +++  + +  N +  Q+ +        S  A+S+  A+  
Sbjct: 586 SLEIDYSSLIDVRLVKLGNSNATIAIADDNNENYAQNQDVLTRQPNGSKEANSVSAASPA 645

Query: 241 KQGNGKVTAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALR 300
            Q NG V  W+EI++ALSAKKAEL+K DGW+R +SSGR              + S RALR
Sbjct: 646 -QANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGR-------------SAWSFRALR 700

Query: 301 GSALGPIVALLRARNEI 310
            SALGP +A LRA+N I
Sbjct: 706 RSALGPTMAFLRAQNGI 700

[Close]
BLAST of Cp4.1LG09g06320 vs. TrEMBL
Match: A0A061E6T2_THECC (Sphere organelles protein-related, putative isoform 1 OS=Theobroma cacao GN=TCM_010599 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.0e-64
Identity = 151/316 (47.78%), Postives = 201/316 (63.61%), Query Frame = 1 

Query: 3   DDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSL 62
           D  VPVV++PGHIRFEP+    A++  +Q + + +ET  WNGIT+KKKGQKWGKEKT  L
Sbjct: 339 DYVVPVVIRPGHIRFEPLETEDAERAVQQ-SQISVETFQWNGITSKKKGQKWGKEKTPFL 398

Query: 63  NRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIELSS 122
            RN+     D+     +TE       A +   ++FD+L P S LP++GD VAYRL+ELSS
Sbjct: 399 KRND-----DKSFSQVSTEMVAIEEKATITDDMDFDKLMPYSSLPKEGDFVAYRLVELSS 458

Query: 123 TWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDED-SALHLDSTPYGENGSL 182
           +WTPE+ SFR GK+S YD ESNRI+L PVPEYP   +K++DED S L  D++ YGE+GSL
Sbjct: 459 SWTPELCSFRVGKISDYDAESNRIILTPVPEYPNASEKKIDEDESELQSDTSLYGEDGSL 518

Query: 183 KIDFASLVDLRLIRQGSLDS--------SKTMVNQENTSAKQSAESSIFAHSIGNANDTK 242
           +ID+ SL+D+RLI+ G+ ++        S+      N    +    S  A  + +A    
Sbjct: 519 EIDYTSLIDVRLIKHGNSNAIISVAGGISENCAEDPNVLKNRQPNGSKEAVLV-SAPPLA 578

Query: 243 QGNGKVTAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRG 302
           Q NG V  W+EIS+ALSAKK EL+K DGW             +Q +SSG+ S S RALR 
Sbjct: 579 QANGVVNGWEEISQALSAKKVELSKEDGW-------------SQTDSSGRSSWSYRALRR 634

Query: 303 SALGPIVALLRARNEI 310
           SALGP +A LRA+N I
Sbjct: 639 SALGPTMAFLRAQNGI 634

[Close]
BLAST of Cp4.1LG09g06320 vs. TAIR10
Match: AT1G13030.1 (AT1G13030.1 sphere organelles protein-related)

HSP 1 Score: 201.4 bits (511), Expect = 7.8e-52
Identity = 128/312 (41.03%), Postives = 193/312 (61.86%), Query Frame = 1 

Query: 3   DDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSL 62
           D+ VPV V+PGHIRF+P+        + +P    +E + WNG   KKKGQKWG EK+   
Sbjct: 326 DEVVPVEVRPGHIRFKPLAGTDEASLDSEPL---VENVLWNGNMTKKKGQKWGTEKSGFS 385

Query: 63  NRNNSNNHTDEPLRLPTTEAEQHTI-SAPVVGLINFDELEPCSGLPQKGDVVAYRLIELS 122
            R   + + D      T  AE  T+ + P    I++++L   +G  +KGDV+AYRLIEL+
Sbjct: 386 KRYAQDFNED----ATTQPAEAETLANCP----IDYEQLVAYTGSVKKGDVIAYRLIELT 445

Query: 123 STWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGSL 182
           S+WTPE+SSFR GK+S+YD +S  + L PV E+P+  K E D+D  +  D++ Y E+GSL
Sbjct: 446 SSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPIEKKTEEDDDFCMQPDTSLYKEDGSL 505

Query: 183 KIDFASLVDLRLIRQGSLDS---SKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGK 242
           +I+F++L+D+R ++  S DS   +K+ + + + SAK+   S     +        + NG+
Sbjct: 506 EIEFSALLDVRSVKTSSSDSAEVAKSALPEPDQSAKKPKLS-----ANKELQTPAKENGE 565

Query: 243 VTAWDEISEALSAKKAELTK-NDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALG 302
           V+ W+E+SEALSAKKA L++ N+GWN++ SS           S G  S S +ALRGSA+G
Sbjct: 566 VSPWEELSEALSAKKAALSQANNGWNKKGSS-----------SGG--SWSYKALRGSAMG 608

Query: 303 PIVALLRARNEI 310
           P++  LR++ EI
Sbjct: 626 PVMNYLRSQKEI 608

[Close]
BLAST of Cp4.1LG09g06320 vs. NCBI nr
Match: gi|659090675|ref|XP_008446142.1| (PREDICTED: coilin isoform X1 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.7e-117
Identity = 229/310 (73.87%), Postives = 256/310 (82.58%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQT-EKQPNHLPLETLHWNGITNKKKGQKWGKEKT 60
           MDDDTVPVVVKPGHIRFEPVGKV  DQ  +++ NH P ETLHWNGITNKKKGQKWGKEKT
Sbjct: 318 MDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETLHWNGITNKKKGQKWGKEKT 377

Query: 61  SSLNRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIE 120
            S  RNNSN  T EPL+L  +E EQ     PVVG INFDEL P +GLPQ+GD++AYRLIE
Sbjct: 378 PSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDELRPYTGLPQEGDLIAYRLIE 437

Query: 121 LSSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENG 180
           LSSTWTPEISSFRAGKVSWYDTESNRIML PVPEYP+PVKKE+DEDS L  D+TPYGE+G
Sbjct: 438 LSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKKEIDEDSELQSDTTPYGEDG 497

Query: 181 SLKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKV 240
           SLKIDFASLVDLRLIRQG+LDSS+T VNQE TS KQ AESS   H+ G+ANDT+QGNGKV
Sbjct: 498 SLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESSKHVHNNGDANDTRQGNGKV 557

Query: 241 TAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPI 300
           +AWDEISEALSAKK EL+KN+GW             NQEESSG++S S RALRGSALGP 
Sbjct: 558 SAWDEISEALSAKKVELSKNNGW-------------NQEESSGRKSWSYRALRGSALGPT 612

Query: 301 VALLRARNEI 310
           +ALLR++ E+
Sbjct: 618 MALLRSQKEL 612

[Close]
BLAST of Cp4.1LG09g06320 vs. NCBI nr
Match: gi|659090677|ref|XP_008446143.1| (PREDICTED: coilin isoform X2 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.7e-117
Identity = 229/310 (73.87%), Postives = 256/310 (82.58%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQT-EKQPNHLPLETLHWNGITNKKKGQKWGKEKT 60
           MDDDTVPVVVKPGHIRFEPVGKV  DQ  +++ NH P ETLHWNGITNKKKGQKWGKEKT
Sbjct: 316 MDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKENHFPKETLHWNGITNKKKGQKWGKEKT 375

Query: 61  SSLNRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIE 120
            S  RNNSN  T EPL+L  +E EQ     PVVG INFDEL P +GLPQ+GD++AYRLIE
Sbjct: 376 PSWKRNNSNVCTSEPLQL-LSETEQPKTPVPVVGSINFDELRPYTGLPQEGDLIAYRLIE 435

Query: 121 LSSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENG 180
           LSSTWTPEISSFRAGKVSWYDTESNRIML PVPEYP+PVKKE+DEDS L  D+TPYGE+G
Sbjct: 436 LSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPIPVKKEIDEDSELQSDTTPYGEDG 495

Query: 181 SLKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKV 240
           SLKIDFASLVDLRLIRQG+LDSS+T VNQE TS KQ AESS   H+ G+ANDT+QGNGKV
Sbjct: 496 SLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS-KQIAESSKHVHNNGDANDTRQGNGKV 555

Query: 241 TAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPI 300
           +AWDEISEALSAKK EL+KN+GW             NQEESSG++S S RALRGSALGP 
Sbjct: 556 SAWDEISEALSAKKVELSKNNGW-------------NQEESSGRKSWSYRALRGSALGPT 610

Query: 301 VALLRARNEI 310
           +ALLR++ E+
Sbjct: 616 MALLRSQKEL 610

[Close]
BLAST of Cp4.1LG09g06320 vs. NCBI nr
Match: gi|778704880|ref|XP_011655598.1| (PREDICTED: coilin [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-113
Identity = 223/310 (71.94%), Postives = 255/310 (82.26%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQT-EKQPNHLPLETLHWNGITNKKKGQKWGKEKT 60
           MDDDTVPVVVKPGHIRFEPVGKV  DQ  +++ NH P ETLHWNGITNKKKGQKWGKEKT
Sbjct: 318 MDDDTVPVVVKPGHIRFEPVGKVVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKT 377

Query: 61  SSLNRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIE 120
            S  RNNSN+ + EPL+L  +E EQ     PVVG I+FDEL P + LPQ+GD++AYRLIE
Sbjct: 378 PSWKRNNSNDCSSEPLQL-LSETEQPKTPVPVVGSIHFDELPPYTCLPQEGDLIAYRLIE 437

Query: 121 LSSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENG 180
           LSSTWTPEISSFRAGKVSWYDTESNRIML PVPEYPLPVKKE+DEDS L  D+TPYGE+G
Sbjct: 438 LSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDG 497

Query: 181 SLKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKV 240
           SLKIDFASLVDLR+IRQG+LDSS+T VNQE TS KQ AESS   H+  +AN+T+QGNGKV
Sbjct: 498 SLKIDFASLVDLRIIRQGNLDSSRTAVNQEITS-KQIAESSKHVHNNVDANNTRQGNGKV 557

Query: 241 TAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPI 300
           +AWDEISEALSAKK EL+KN+GW             NQE+SSG++S S RALRGSALGP 
Sbjct: 558 SAWDEISEALSAKKVELSKNNGW-------------NQEDSSGRKSWSYRALRGSALGPT 612

Query: 301 VALLRARNEI 310
           +ALLR++ E+
Sbjct: 618 MALLRSQKEL 612

[Close]
BLAST of Cp4.1LG09g06320 vs. NCBI nr
Match: gi|700196565|gb|KGN51742.1| (hypothetical protein Csa_5G598010 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 8.6e-101
Identity = 201/293 (68.60%), Postives = 236/293 (80.55%), Query Frame = 1 

Query: 18  EPVGKVAADQT-EKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSLNRNNSNNHTDEPLR 77
           +  G++  DQ  +++ NH P ETLHWNGITNKKKGQKWGKEKT S  RNNSN+ + EPL+
Sbjct: 265 DTAGEIVTDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNDCSSEPLQ 324

Query: 78  LPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIELSSTWTPEISSFRAGKV 137
           L  +E EQ     PVVG I+FDEL P + LPQ+GD++AYRLIELSSTWTPEISSFRAGKV
Sbjct: 325 L-LSETEQPKTPVPVVGSIHFDELPPYTCLPQEGDLIAYRLIELSSTWTPEISSFRAGKV 384

Query: 138 SWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGSLKIDFASLVDLRLIRQ 197
           SWYDTESNRIML PVPEYPLPVKKE+DEDS L  D+TPYGE+GSLKIDFASLVDLR+IRQ
Sbjct: 385 SWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQ 444

Query: 198 GSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKVTAWDEISEALSAKKAEL 257
           G+LDSS+T VNQE TS KQ AESS   H+  +AN+T+QGNGKV+AWDEISEALSAKK EL
Sbjct: 445 GNLDSSRTAVNQEITS-KQIAESSKHVHNNVDANNTRQGNGKVSAWDEISEALSAKKVEL 504

Query: 258 TKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPIVALLRARNEI 310
           +KN+GW             NQE+SSG++S S RALRGSALGP +ALLR++ E+
Sbjct: 505 SKNNGW-------------NQEDSSGRKSWSYRALRGSALGPTMALLRSQKEL 542

[Close]
BLAST of Cp4.1LG09g06320 vs. NCBI nr
Match: gi|223530466|gb|EEF32350.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 269.2 bits (687), Expect = 8.7e-69
Identity = 150/312 (48.08%), Postives = 211/312 (67.63%), Query Frame = 1 

Query: 1   MDDDTVPVVVKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTS 60
           ++DD VP+V++PGHIRFEP+ K  A+Q E+Q  H+P+E  HWNGIT+KKKGQKWGKEK +
Sbjct: 317 LEDDIVPIVIRPGHIRFEPLSKAGANQAEQQ-THIPVEIFHWNGITSKKKGQKWGKEKAT 376

Query: 61  SLNRNNSNNHTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIEL 120
           S  RN+  N + E      +E  +     PV   ++F++LE  + LP++GDV+AYRLIEL
Sbjct: 377 SYKRNDHRNVSQE-----CSEVRKDG-GRPVYDRVDFEKLEFYTTLPKEGDVIAYRLIEL 436

Query: 121 SSTWTPEISSFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGS 180
           S +WTPEISS+R GK+S YD +SNR+ L PVP YP+  K+  D+ SA   ++ PY ++GS
Sbjct: 437 SPSWTPEISSYRVGKISRYDMQSNRVRLVPVPGYPVTHKETGDDASAAPSETIPYAKDGS 496

Query: 181 LKIDFASLVDLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNAND---TKQGNG 240
           L I+FASL+++RL+ +G+ +S K++  + +    +  ++     S  N N+   + Q NG
Sbjct: 497 LWIEFASLIEVRLVTRGNSNSVKSVAGEIDKVPVRDQDNRTGCRS-NNGNESHVSAQENG 556

Query: 241 KVTAWDEISEALSAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALG 300
           K  AW+EISEAL+AKKAEL + D WN+  SSGRRP              S +ALRGSALG
Sbjct: 557 KGNAWEEISEALNAKKAELAQEDNWNKPGSSGRRP-------------WSYKALRGSALG 607

Query: 301 PIVALLRARNEI 310
           P +ALLRA+NE+
Sbjct: 617 PTMALLRAQNEL 607

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g06320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COIL_ARATH1.4e-5041.03Coilin OS=Arabidopsis thaliana GN=COIL PE=1 SV=1[more]
BLAST of Cp4.1LG09g06320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTI4_CUCSA6.0e-10168.60Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598010 PE=4 SV=1[more]
B9SVN1_RICCO6.1e-6948.08Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0794230 PE=4 SV=1[more]
A0A0D2NQ02_GOSRA6.9e-6546.69Uncharacterized protein OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1[more]
A0A0D2QFC4_GOSRA6.9e-6546.69Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G188300 PE=... [more]
A0A061E6T2_THECC2.0e-6447.78Sphere organelles protein-related, putative isoform 1 OS=Theobroma cacao GN=TCM_... [more]
BLAST of Cp4.1LG09g06320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13030.17.8e-5241.03 sphere organelles protein-related[more]
BLAST of Cp4.1LG09g06320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090675|ref|XP_008446142.1|1.7e-11773.87PREDICTED: coilin isoform X1 [Cucumis melo][more]
gi|659090677|ref|XP_008446143.1|1.7e-11773.87PREDICTED: coilin isoform X2 [Cucumis melo][more]
gi|778704880|ref|XP_011655598.1|1.2e-11371.94PREDICTED: coilin [Cucumis sativus][more]
gi|700196565|gb|KGN51742.1|8.6e-10168.60hypothetical protein Csa_5G598010 [Cucumis sativus][more]
gi|223530466|gb|EEF32350.1|8.7e-6948.08conserved hypothetical protein [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024822Coilin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g06320.1Cp4.1LG09g06320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024822CoilinPANTHERPTHR15197:SF0COILINcoord: 2..309
score: 2.1
NoneNo IPR availablePANTHERPTHR15197COILIN P80coord: 2..309
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g06320Cucsa.394590Cucumber (Gy14) v1cgycpeB1037
Cp4.1LG09g06320MELO3C010699Melon (DHL92) v3.5.1cpemeB037
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g06320Cucumber (Gy14) v2cgybcpeB154
Cp4.1LG09g06320Cucumber (Gy14) v2cgybcpeB588
Cp4.1LG09g06320Melon (DHL92) v3.6.1cpemedB025
Cp4.1LG09g06320Melon (DHL92) v3.6.1cpemedB043
Cp4.1LG09g06320Silver-seed gourdcarcpeB0341
Cp4.1LG09g06320Silver-seed gourdcarcpeB0886
Cp4.1LG09g06320Silver-seed gourdcarcpeB1017
Cp4.1LG09g06320Cucumber (Chinese Long) v3cpecucB0035
Cp4.1LG09g06320Cucumber (Chinese Long) v3cpecucB0051
Cp4.1LG09g06320Wax gourdcpewgoB0054
Cp4.1LG09g06320Cucurbita pepo (Zucchini)cpecpeB020
Cp4.1LG09g06320Cucurbita pepo (Zucchini)cpecpeB033
Cp4.1LG09g06320Cucumber (Gy14) v1cgycpeB0744
Cp4.1LG09g06320Cucurbita maxima (Rimu)cmacpeB167
Cp4.1LG09g06320Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g06320Cucurbita maxima (Rimu)cmacpeB694
Cp4.1LG09g06320Cucurbita maxima (Rimu)cmacpeB764
Cp4.1LG09g06320Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g06320Cucurbita moschata (Rifu)cmocpeB646
Cp4.1LG09g06320Cucurbita moschata (Rifu)cmocpeB718
Cp4.1LG09g06320Wild cucumber (PI 183967)cpecpiB030
Cp4.1LG09g06320Wild cucumber (PI 183967)cpecpiB042
Cp4.1LG09g06320Cucumber (Chinese Long) v2cpecuB034
Cp4.1LG09g06320Cucumber (Chinese Long) v2cpecuB047
Cp4.1LG09g06320Bottle gourd (USVL1VR-Ls)cpelsiB030
Cp4.1LG09g06320Bottle gourd (USVL1VR-Ls)cpelsiB045
Cp4.1LG09g06320Watermelon (Charleston Gray)cpewcgB041
Cp4.1LG09g06320Watermelon (Charleston Gray)cpewcgB054
Cp4.1LG09g06320Watermelon (97103) v1cpewmB022
Cp4.1LG09g06320Watermelon (97103) v1cpewmB028
Cp4.1LG09g06320Melon (DHL92) v3.5.1cpemeB021