Cp4.1LG09g05480 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g05480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNAC domain protein,
LocationCp4.1LG09 : 4720245 .. 4721354 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCCTGTCTTGTTTTTCCAACATAAGCGCGTTGAGCTTGATGTCTACATTTCCATTAACTTATCCCAATATATATATATGTATACATATCAACCTACAATGGCTATCACAATGCCAATGTCAATGGCTATCGAGGAAAATGACTCGAACGTTGAGTACCCACCGGGATTCCGCTTCTACCCGACTGAGGAAGAGCTCATTTCCTTCTATCTTCGACACCAACTCAATGGTCAGCTACTCGAAAAGCACCGCGTCATTCCTCTTCTTAATATCTACGATTCCGAGCCCTGGGATCTTCCAAGTAACTACTCACTTTCTCCTCTTCTCTCTTAAGTTCGGTTTAAATTTCGTTAGATTATGTTGTCAATACCGAAGAAAAAGGTTAAAGGGTAAAATTGAAATTTTGACAGTGATATTAATTATTAAATATTTAAAAATTTTAATTTGATCTAATTGGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTGAAACAGAGTTCGCCGGCGAGCTCTGTAAAGGGGACAGCGAGCAATGGTTCTTCTTCGTGGCACGGCAAGAGAGGGAGGCTCGCGGTGGTCGGCCGAGTAGAACCACTGCTACTGGCTACTGGAAGGCTACCGGCTCTCCGGTCTACGTGTACTCCGCCGCCAATAAAATAATTGGATTGAAGAAGACGATGGTGTTCTACAAGGGCAGAGCACCGACCGGAACCAAAACCAAGTGGAAGATGAACGAATACAGAGCAATTGATGATTCCACTAAGGTCCGACACAAATTTGCTTTGTTGATTTCGATTATTGACTCTCGTTTTCGCCGTTTAATCGATTTGTGTTGCAGTTGAGATACGAATTCAGTTTGTGCCGAGTTTATGTGATTTCGGGATGTTTTCGAGCCTTCGATCGGCGGCCAATGGAAGTCATCGGCGATGGTCGGAACAACGCCGATCAGAAACAGAAGGCGGAAGCGATAACGGCGGCGATTTCATGTTCGGCGCCGGCGACTGGTTTCTGCGGCGTAAGTGGCGGTAGTTCGGGAATGGTTGAAGACGAAGAGATTGAAGAGGCGAATTGGGAATGGGATCAAATAGATTGGCCCTAG

mRNA sequence

GTCCCTGTCTTGTTTTTCCAACATAAGCGCGTTGAGCTTGATGTCTACATTTCCATTAACTTATCCCAATATATATATATGTATACATATCAACCTACAATGGCTATCACAATGCCAATGTCAATGGCTATCGAGGAAAATGACTCGAACGTTGAGTACCCACCGGGATTCCGCTTCTACCCGACTGAGGAAGAGCTCATTTCCTTCTATCTTCGACACCAACTCAATGGTCAGCTACTCGAAAAGCACCGCGTCATTCCTCTTCTTAATATCTACGATTCCGAGCCCTGGGATCTTCCAAAGTTCGCCGGCGAGCTCTGTAAAGGGGACAGCGAGCAATGGTTCTTCTTCGTGGCACGGCAAGAGAGGGAGGCTCGCGGTGGTCGGCCGAGTAGAACCACTGCTACTGGCTACTGGAAGGCTACCGGCTCTCCGGTCTACGTGTACTCCGCCGCCAATAAAATAATTGGATTGAAGAAGACGATGGTGTTCTACAAGGGCAGAGCACCGACCGGAACCAAAACCAAGTGGAAGATGAACGAATACAGAGCAATTGATGATTCCACTAAGTTGAGATACGAATTCAGTTTGTGCCGAGTTTATGTGATTTCGGGATGTTTTCGAGCCTTCGATCGGCGGCCAATGGAAGTCATCGGCGATGGTCGGAACAACGCCGATCAGAAACAGAAGGCGGAAGCGATAACGGCGGCGATTTCATGTTCGGCGCCGGCGACTGGTTTCTGCGGCGTAAGTGGCGGTAGTTCGGGAATGGTTGAAGACGAAGAGATTGAAGAGGCGAATTGGGAATGGGATCAAATAGATTGGCCCTAG

Coding sequence (CDS)

GTCCCTGTCTTGTTTTTCCAACATAAGCGCGTTGAGCTTGATGTCTACATTTCCATTAACTTATCCCAATATATATATATGTATACATATCAACCTACAATGGCTATCACAATGCCAATGTCAATGGCTATCGAGGAAAATGACTCGAACGTTGAGTACCCACCGGGATTCCGCTTCTACCCGACTGAGGAAGAGCTCATTTCCTTCTATCTTCGACACCAACTCAATGGTCAGCTACTCGAAAAGCACCGCGTCATTCCTCTTCTTAATATCTACGATTCCGAGCCCTGGGATCTTCCAAAGTTCGCCGGCGAGCTCTGTAAAGGGGACAGCGAGCAATGGTTCTTCTTCGTGGCACGGCAAGAGAGGGAGGCTCGCGGTGGTCGGCCGAGTAGAACCACTGCTACTGGCTACTGGAAGGCTACCGGCTCTCCGGTCTACGTGTACTCCGCCGCCAATAAAATAATTGGATTGAAGAAGACGATGGTGTTCTACAAGGGCAGAGCACCGACCGGAACCAAAACCAAGTGGAAGATGAACGAATACAGAGCAATTGATGATTCCACTAAGTTGAGATACGAATTCAGTTTGTGCCGAGTTTATGTGATTTCGGGATGTTTTCGAGCCTTCGATCGGCGGCCAATGGAAGTCATCGGCGATGGTCGGAACAACGCCGATCAGAAACAGAAGGCGGAAGCGATAACGGCGGCGATTTCATGTTCGGCGCCGGCGACTGGTTTCTGCGGCGTAAGTGGCGGTAGTTCGGGAATGGTTGAAGACGAAGAGATTGAAGAGGCGAATTGGGAATGGGATCAAATAGATTGGCCCTAG

Protein sequence

VPVLFFQHKRVELDVYISINLSQYIYMYTYQPTMAITMPMSMAIEENDSNVEYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDSEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGTKTKWKMNEYRAIDDSTKLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNNADQKQKAEAITAAISCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQIDWP
Homology
[Close]
BLAST of Cp4.1LG09g05480 vs. Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-63
Identity = 126/233 (54.08%), Postives = 159/233 (68.24%), Query Frame = 1 

Query: 56  GFRFYPTEEELISFYLRHQLNGQLLEK-HRVIPLLNIYDSEPWDLPKFAGELCKGDSEQW 115
           GFRFYPTEEEL+SFYLR+QL G+  +  HRVIP+L++++ EP  LP  AG  C+GD+EQW
Sbjct: 8   GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQW 67

Query: 116 FFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGTK 175
           FFFV RQEREARGGRPSRTT +GYWKATGSP  V+S  NK+IG KKTMVFY G+APTG K
Sbjct: 68  FFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRK 127

Query: 176 TKWKMNEYRAIDDST------KLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNNADQK 235
           TKWKMNEY A+D++       KLR EFSLCRVY+ +G  RAFDRRP     +G    ++ 
Sbjct: 128 TKWKMNEYHAVDETVNASTIPKLRREFSLCRVYITTGSSRAFDRRP-----EGVLQTERM 187

Query: 236 QKAEAITAAISCSAPATGFCGVSGG-----SSGMVEDEEIEEANWEWDQIDWP 277
             ++   A  S    ++    +SGG     S      + + E  W+W+Q+ WP
Sbjct: 188 LTSDVAVAETSFRVESSLETSISGGEHIDVSMNTEFVDGLSEPMWDWEQLTWP 235

[Close]
BLAST of Cp4.1LG09g05480 vs. Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.2e-54
Identity = 114/236 (48.31%), Postives = 146/236 (61.86%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           E   GFRFYPTE EL+++YLR QL G     H +IP+L+++  EP  LP  AGE C+GD+
Sbjct: 4   ELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDA 63

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQW FFV RQEREARGGRPSRTT +GYWKATGSP  V+S  N++IG+KKTMVFY G+APT
Sbjct: 64  EQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPT 123

Query: 172 GTKTKWKMNEYRAIDDSTKLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNNADQKQKA 231
           G KTKWKMNEY+A++ ++              SG  RAFDRRP E     RN        
Sbjct: 124 GRKTKWKMNEYKAVETAS--------VSTIPKSGSSRAFDRRPTEAYAIERNL--PSNGV 183

Query: 232 EAITAAISCSAPATGFCG------------VSGGSSGMVEDEEIEEANWEWDQIDW 276
           E  + A   ++P T   G            ++   S MV  +E+ +  WEW+Q++W
Sbjct: 184 ETSSRATISTSPETSHSGGNQVDLPVNATTITQSISDMV--DELSQPFWEWEQMNW 227

[Close]
BLAST of Cp4.1LG09g05480 vs. Swiss-Prot
Match: NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana GN=NAC035 PE=1 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-33
Identity = 73/149 (48.99%), Postives = 97/149 (65.10%), Query Frame = 1 

Query: 55  PGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDSEQW 114
           PGFRF+PTEEELI FYLR ++ G+      +I  L++Y  +PW+LP  A     G+ E W
Sbjct: 53  PGFRFHPTEEELIEFYLRRKVEGKRFNVE-LITFLDLYRYDPWELPAMAAI---GEKE-W 112

Query: 115 FFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGTK 174
           +F+V R  +   G RP+R T +GYWKATG+   + S  ++ IGLKKT+VFY G+AP GT+
Sbjct: 113 YFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTR 172

Query: 175 TKWKMNEYRAIDDSTK--LRYEFSLCRVY 202
           T W MNEYR     T+   + E SLCRVY
Sbjct: 173 TSWIMNEYRLPHHETEKYQKAEISLCRVY 196

[Close]
BLAST of Cp4.1LG09g05480 vs. Swiss-Prot
Match: NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-31
Identity = 71/157 (45.22%), Postives = 101/157 (64.33%), Query Frame = 1 

Query: 51  VEYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGD 110
           V  PPGFRF+PT+EELI++YL+ ++NGQ +E   +IP +++Y  EPWDLP     L    
Sbjct: 4   VSLPPGFRFHPTDEELITYYLKRKINGQEIELE-IIPEVDLYKCEPWDLP--GKSLIPSK 63

Query: 111 SEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAP 170
            ++WFFF  R  +   G R +R T  GYWKATG    V S  ++ IG KKT+V+Y+GRAP
Sbjct: 64  DQEWFFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRV-SWRDRAIGTKKTLVYYRGRAP 123

Query: 171 TGTKTKWKMNEYRAIDDST------KLRYEFSLCRVY 202
            G +T W M+EYR +D+S        ++  ++LCRV+
Sbjct: 124 HGIRTGWVMHEYR-LDESECEPSAFGMQDAYALCRVF 155

[Close]
BLAST of Cp4.1LG09g05480 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-30
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = 1 

Query: 54  PPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDSEQ 113
           P GFRF PT+EELI+ YLR ++NG+ LE  RVIP +++   EPWDLP  +  + K D ++
Sbjct: 25  PLGFRFRPTDEELINHYLRLKINGRDLEV-RVIPEIDVCKWEPWDLPGLS--VIKTDDQE 84

Query: 114 WFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGT 173
           WFFF  R  +   G R +R T  GYWKATG    + S    IIG+KKT+VFY+GRAP G 
Sbjct: 85  WFFFCPRDRKYPSGHRSNRATDIGYWKATGKDRTIKSK-KMIIGMKKTLVFYRGRAPRGE 144

Query: 174 KTKWKMNEYRA----IDDSTKLRYEFSLCRVY 202
           +T W M+EYRA    +D +   +  + LCR++
Sbjct: 145 RTNWIMHEYRATDKELDGTGPGQNPYVLCRLF 172

[Close]
BLAST of Cp4.1LG09g05480 vs. TrEMBL
Match: A0A0A0LSP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165230 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 8.3e-102
Identity = 181/238 (76.05%), Postives = 201/238 (84.45%), Query Frame = 1 

Query: 40  MSMAIEENDSNV-EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWD 99
           M+M  EE + ++ EYPPGFRFYPTEEEL+SFYL HQL  QL EKHRVIPLLNIYD +PWD
Sbjct: 1   MAMQEEEEEESIHEYPPGFRFYPTEEELVSFYLPHQLQTQLPEKHRVIPLLNIYDFDPWD 60

Query: 100 LPKFAGELCKGDSEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGL 159
           LPK AGELCKGD+EQWFFFV RQEREARGGRPSRTTA GYWKATGSPVYVYS+A+K+IGL
Sbjct: 61  LPKLAGELCKGDNEQWFFFVPRQEREARGGRPSRTTAAGYWKATGSPVYVYSSASKVIGL 120

Query: 160 KKTMVFYKGRAPTGTKTKWKMNEYRAIDDSTKLRYEFSLCRVYVISGCFRAFDRRPMEVI 219
           KKTMVFYKGRAPTGTKTKWKM+EYRAIDDS KLR+EFSLCRVYVISGCFRAFDRRPME I
Sbjct: 121 KKTMVFYKGRAPTGTKTKWKMHEYRAIDDSAKLRHEFSLCRVYVISGCFRAFDRRPMESI 180

Query: 220 GDGRNNADQKQKAEAITAAISCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQIDWP 277
              R NAD K+K +  +  ISCSA A   C  SG +  M EDEE EE+ WEW+++DWP
Sbjct: 181 AAARKNADSKRKGKVSSPEISCSAAAMVHCDGSGSNWRMDEDEEFEESIWEWEKMDWP 238

[Close]
BLAST of Cp4.1LG09g05480 vs. TrEMBL
Match: W9RGY6_9ROSA (NAC domain-containing protein 90 OS=Morus notabilis GN=L484_016300 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.6e-73
Identity = 140/241 (58.09%), Postives = 176/241 (73.03%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           E PPGFRFYPTEEEL+SFYL ++L G+  E +RVI +++IY  EPWDLPK++GELC+GD+
Sbjct: 3   ELPPGFRFYPTEEELVSFYLLNKLEGKREEINRVINVIDIYGIEPWDLPKYSGELCRGDT 62

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQEREARGGRP+RTTA+GYWKATGSP YVYS  +K+IG+KKTMVFYKG+APT
Sbjct: 63  EQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYVYSPDSKVIGVKKTMVFYKGKAPT 122

Query: 172 GTKTKWKMNEYRAID-------DSTKLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNN 231
           G KTKWKMNEYRAI+        + KLR+EFSLCRVYVISG FRAFDRRP+EV GD ++ 
Sbjct: 123 GRKTKWKMNEYRAIEAANPDGATTPKLRHEFSLCRVYVISGSFRAFDRRPLEVTGDPQHQ 182

Query: 232 ADQKQKAEAITAAI---------SCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQIDW 277
            D+   +   T  +         S S       G SG ++    ++++E+   E D++ W
Sbjct: 183 GDRAGPSAQNTTMVEKAGSSSETSSSGDLADPPGASGSNTDWEMNDDLEQTFLELDELQW 242

[Close]
BLAST of Cp4.1LG09g05480 vs. TrEMBL
Match: A0A151RN15_CAJCA (NAC domain-containing protein 90 OS=Cajanus cajan GN=KK1_034626 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71
Identity = 140/248 (56.45%), Postives = 177/248 (71.37%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           + PPGFRFYPTEEEL++FYL +QL GQ  +  RVIP+++I+  EPW LP  AGELC+GD+
Sbjct: 7   DLPPGFRFYPTEEELLAFYLHNQLQGQRHDMSRVIPVVDIHGVEPWTLPSLAGELCRGDT 66

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQEREARGGRP+RTTA+GYWKATG+P +VYS+ NK+IG+KKTMVFYKG+APT
Sbjct: 67  EQWFFFSPRQEREARGGRPNRTTASGYWKATGTPAHVYSSHNKVIGMKKTMVFYKGKAPT 126

Query: 172 GTKTKWKMNEYRAID--------DSTKLRYEFSLCRVYVISGCFRAFDRRPME-----VI 231
           G KTKWKM+EY+AI+           KLR+EFSLCRVYVISG FR+FDRRP+E     V 
Sbjct: 127 GRKTKWKMHEYKAIEHPPDQSNTTPPKLRHEFSLCRVYVISGSFRSFDRRPLEGYSRAVD 186

Query: 232 GD-GRNNADQKQKAEAITAAISCSAPATGFCGVS------GGSSGM---VEDEEIEEANW 277
           GD G  +   +Q+A  +  + S     +G  G +       GSSG      +  +EE  W
Sbjct: 187 GDRGGASTSAQQRAPVVDGSSSSETSHSGGGGAALTSEAVAGSSGTNWNQSNNSVEEPFW 246

[Close]
BLAST of Cp4.1LG09g05480 vs. TrEMBL
Match: A0A0R0H743_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G186200 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.0e-71
Identity = 136/243 (55.97%), Postives = 172/243 (70.78%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           + PPGFRFYPTEEEL+ FYL +QL GQ+ +  RVIP+++I   EPW+LP  AGELC+GD+
Sbjct: 3   DLPPGFRFYPTEEELVFFYLHNQLEGQIHDTSRVIPVIDINGVEPWNLPSLAGELCRGDT 62

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQEREARGGRP+RTTA+GYWKATGSP +VYS+ NK+IG+KKTMVFYKG+APT
Sbjct: 63  EQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHVYSSDNKVIGMKKTMVFYKGKAPT 122

Query: 172 GTKTKWKMNEYRAIDDS-------TKLRYEFSLCRVYVISGCFRAFDRRPMEV------- 231
           G KTKWKM+EY+AI+ S        KLR+EFSLCRVYVISG FR+FDRRP+++       
Sbjct: 123 GRKTKWKMHEYKAIEHSDQSNTAPPKLRHEFSLCRVYVISGSFRSFDRRPLDMPRVELRV 182

Query: 232 ----IGDGRNNADQKQKAEAITAAISCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQI 277
                G    +A  +Q++ + T+     A  T   G     +       +EE  WEW+Q+
Sbjct: 183 VDGDRGAASTSAQAQQRSSSHTSHSGGDAHVTD-AGAGSSGTNWNASNRVEEPLWEWEQL 242

[Close]
BLAST of Cp4.1LG09g05480 vs. TrEMBL
Match: A0A0B2R106_GLYSO (NAC domain-containing protein 90 OS=Glycine soja GN=glysoja_026203 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.0e-71
Identity = 136/243 (55.97%), Postives = 172/243 (70.78%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           + PPGFRFYPTEEEL+ FYL +QL GQ+ +  RVIP+++I   EPW+LP  AGELC+GD+
Sbjct: 3   DLPPGFRFYPTEEELVFFYLHNQLEGQIHDTSRVIPVIDINGVEPWNLPSLAGELCRGDT 62

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQEREARGGRP+RTTA+GYWKATGSP +VYS+ NK+IG+KKTMVFYKG+APT
Sbjct: 63  EQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHVYSSDNKVIGMKKTMVFYKGKAPT 122

Query: 172 GTKTKWKMNEYRAIDDS-------TKLRYEFSLCRVYVISGCFRAFDRRPMEV------- 231
           G KTKWKM+EY+AI+ S        KLR+EFSLCRVYVISG FR+FDRRP+++       
Sbjct: 123 GRKTKWKMHEYKAIEHSDQSNTAPPKLRHEFSLCRVYVISGSFRSFDRRPLDMPRVELRV 182

Query: 232 ----IGDGRNNADQKQKAEAITAAISCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQI 277
                G    +A  +Q++ + T+     A  T   G     +       +EE  WEW+Q+
Sbjct: 183 VDGDRGAASTSAQAQQRSSSHTSHSGGDAHVTD-AGAGSSGTNWNASNRVEEPLWEWEQL 242

[Close]
BLAST of Cp4.1LG09g05480 vs. TAIR10
Match: AT5G22380.1 (AT5G22380.1 NAC domain containing protein 90)

HSP 1 Score: 244.2 bits (622), Expect = 9.4e-65
Identity = 126/233 (54.08%), Postives = 159/233 (68.24%), Query Frame = 1 

Query: 56  GFRFYPTEEELISFYLRHQLNGQLLEK-HRVIPLLNIYDSEPWDLPKFAGELCKGDSEQW 115
           GFRFYPTEEEL+SFYLR+QL G+  +  HRVIP+L++++ EP  LP  AG  C+GD+EQW
Sbjct: 8   GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQW 67

Query: 116 FFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGTK 175
           FFFV RQEREARGGRPSRTT +GYWKATGSP  V+S  NK+IG KKTMVFY G+APTG K
Sbjct: 68  FFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRK 127

Query: 176 TKWKMNEYRAIDDST------KLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNNADQK 235
           TKWKMNEY A+D++       KLR EFSLCRVY+ +G  RAFDRRP     +G    ++ 
Sbjct: 128 TKWKMNEYHAVDETVNASTIPKLRREFSLCRVYITTGSSRAFDRRP-----EGVLQTERM 187

Query: 236 QKAEAITAAISCSAPATGFCGVSGG-----SSGMVEDEEIEEANWEWDQIDWP 277
             ++   A  S    ++    +SGG     S      + + E  W+W+Q+ WP
Sbjct: 188 LTSDVAVAETSFRVESSLETSISGGEHIDVSMNTEFVDGLSEPMWDWEQLTWP 235

[Close]
BLAST of Cp4.1LG09g05480 vs. TAIR10
Match: AT3G44350.2 (AT3G44350.2 NAC domain containing protein 61)

HSP 1 Score: 238.0 bits (606), Expect = 6.8e-63
Identity = 123/241 (51.04%), Postives = 158/241 (65.56%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           E   GFRFYPTE EL+++YLR QL G     H +IP+L+++  EP  LP  AGE C+GD+
Sbjct: 4   ELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDA 63

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQW FFV RQEREARGGRPSRTT +GYWKATGSP  V+S  N++IG+KKTMVFY G+APT
Sbjct: 64  EQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPT 123

Query: 172 GTKTKWKMNEYRAIDDST-----KLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNNAD 231
           G KTKWKMNEY+A++ ++     KLR EFS+CR+Y+ SG  RAFDRRP E     RN   
Sbjct: 124 GRKTKWKMNEYKAVETASVSTIPKLRPEFSICRIYIKSGSSRAFDRRPTEAYAIERNL-- 183

Query: 232 QKQKAEAITAAISCSAPATGFCG------------VSGGSSGMVEDEEIEEANWEWDQID 276
                E  + A   ++P T   G            ++   S MV  +E+ +  WEW+Q++
Sbjct: 184 PSNGVETSSRATISTSPETSHSGGNQVDLPVNATTITQSISDMV--DELSQPFWEWEQMN 240

[Close]
BLAST of Cp4.1LG09g05480 vs. TAIR10
Match: AT2G17040.1 (AT2G17040.1 NAC domain containing protein 36)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 76/161 (47.20%), Postives = 104/161 (64.60%), Query Frame = 1 

Query: 55  PGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDSEQW 114
           PGFRF+PTEEEL+ FYL++ + G+      VI  LNIY  +PWDLP     L +    +W
Sbjct: 8   PGFRFHPTEEELLDFYLKNMVYGKR-SSVEVIGFLNIYRHDPWDLPG----LSRIGEREW 67

Query: 115 FFFVARQEREARGGRPSRTTATGYWKATGS--PVYVYSAANKIIGLKKTMVFYKGRAPTG 174
           +FFV R+ +   GGRPSRTT  GYWKATGS   +   S   ++IGLKKT+VFY+GRAP G
Sbjct: 68  YFFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYRGRAPGG 127

Query: 175 TKTKWKMNEYRAIDDSTKLRYEFSLCRVYVISGCFRAFDRR 214
           +KT W MNE+R + D+  L  +  LC++Y  +   +  ++R
Sbjct: 128 SKTDWVMNEFR-MPDNCSLPKDVVLCKIYRKATSLKVLEQR 162

[Close]
BLAST of Cp4.1LG09g05480 vs. TAIR10
Match: AT2G02450.2 (AT2G02450.2 NAC domain containing protein 35)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 73/149 (48.99%), Postives = 97/149 (65.10%), Query Frame = 1 

Query: 55  PGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDSEQW 114
           PGFRF+PTEEELI FYLR ++ G+      +I  L++Y  +PW+LP  A     G+ E W
Sbjct: 53  PGFRFHPTEEELIEFYLRRKVEGKRFNVE-LITFLDLYRYDPWELPAMAAI---GEKE-W 112

Query: 115 FFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGTK 174
           +F+V R  +   G RP+R T +GYWKATG+   + S  ++ IGLKKT+VFY G+AP GT+
Sbjct: 113 YFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTR 172

Query: 175 TKWKMNEYRAIDDSTK--LRYEFSLCRVY 202
           T W MNEYR     T+   + E SLCRVY
Sbjct: 173 TSWIMNEYRLPHHETEKYQKAEISLCRVY 196

[Close]
BLAST of Cp4.1LG09g05480 vs. TAIR10
Match: AT1G54330.1 (AT1G54330.1 NAC domain containing protein 20)

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-33
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1 

Query: 54  PPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDSEQ 113
           PPGFRF+PT+EEL+++YL  ++NGQ +E   +IP +++Y  EPWDLP+       G+  +
Sbjct: 7   PPGFRFHPTDEELVAYYLDRKVNGQAIEL-EIIPEVDLYKCEPWDLPE--KSFLPGNDME 66

Query: 114 WFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPTGT 173
           W+F+  R ++   G R +R T  GYWKATG    V S   K +G+KKT+V+Y+GRAP G 
Sbjct: 67  WYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMK-MGMKKTLVYYRGRAPHGL 126

Query: 174 KTKWKMNEYRAID-DSTKLRYEFSLCRVY 202
           +T W M+EYR     S+ L+  ++LCRV+
Sbjct: 127 RTNWVMHEYRLTHAPSSSLKESYALCRVF 151

[Close]
BLAST of Cp4.1LG09g05480 vs. NCBI nr
Match: gi|449443454|ref|XP_004139492.1| (PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 181/238 (76.05%), Postives = 201/238 (84.45%), Query Frame = 1 

Query: 40  MSMAIEENDSNV-EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWD 99
           M+M  EE + ++ EYPPGFRFYPTEEEL+SFYL HQL  QL EKHRVIPLLNIYD +PWD
Sbjct: 1   MAMQEEEEEESIHEYPPGFRFYPTEEELVSFYLPHQLQTQLPEKHRVIPLLNIYDFDPWD 60

Query: 100 LPKFAGELCKGDSEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGL 159
           LPK AGELCKGD+EQWFFFV RQEREARGGRPSRTTA GYWKATGSPVYVYS+A+K+IGL
Sbjct: 61  LPKLAGELCKGDNEQWFFFVPRQEREARGGRPSRTTAAGYWKATGSPVYVYSSASKVIGL 120

Query: 160 KKTMVFYKGRAPTGTKTKWKMNEYRAIDDSTKLRYEFSLCRVYVISGCFRAFDRRPMEVI 219
           KKTMVFYKGRAPTGTKTKWKM+EYRAIDDS KLR+EFSLCRVYVISGCFRAFDRRPME I
Sbjct: 121 KKTMVFYKGRAPTGTKTKWKMHEYRAIDDSAKLRHEFSLCRVYVISGCFRAFDRRPMESI 180

Query: 220 GDGRNNADQKQKAEAITAAISCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQIDWP 277
              R NAD K+K +  +  ISCSA A   C  SG +  M EDEE EE+ WEW+++DWP
Sbjct: 181 AAARKNADSKRKGKVSSPEISCSAAAMVHCDGSGSNWRMDEDEEFEESIWEWEKMDWP 238

[Close]
BLAST of Cp4.1LG09g05480 vs. NCBI nr
Match: gi|659071658|ref|XP_008461272.1| (PREDICTED: NAC domain-containing protein 90-like [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 181/238 (76.05%), Postives = 201/238 (84.45%), Query Frame = 1 

Query: 40  MSMAIEENDSNV-EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWD 99
           M+M  EE + ++ EYPPGFRFYPTEEEL+SFYL HQL  QL E HRVIPLLNIYD +PWD
Sbjct: 1   MAMQEEEEEESIHEYPPGFRFYPTEEELLSFYLPHQLQTQLPEMHRVIPLLNIYDFDPWD 60

Query: 100 LPKFAGELCKGDSEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGL 159
           LPKFAGELCKGD+EQWFFFV RQEREARGGRPSRTTA GYWKATGSPVYVYS+A+K+IGL
Sbjct: 61  LPKFAGELCKGDNEQWFFFVPRQEREARGGRPSRTTAAGYWKATGSPVYVYSSASKVIGL 120

Query: 160 KKTMVFYKGRAPTGTKTKWKMNEYRAIDDSTKLRYEFSLCRVYVISGCFRAFDRRPMEVI 219
           KKTMVFYKGRAPTGTKTKWKM+EYRAIDDS KLR+EFSLCRVYVISGCFRAFDRRPMEVI
Sbjct: 121 KKTMVFYKGRAPTGTKTKWKMHEYRAIDDSAKLRHEFSLCRVYVISGCFRAFDRRPMEVI 180

Query: 220 GDGRNNADQKQKAEAITAAISCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQIDWP 277
              R NAD K K +  +  ISCSA A   C  SG +  M EDE+ EE+ WEW+++DWP
Sbjct: 181 AAARKNADPKMKGKVTSPEISCSAAAMVHCDGSGSNWRMDEDEKFEESIWEWEKMDWP 238

[Close]
BLAST of Cp4.1LG09g05480 vs. NCBI nr
Match: gi|1009113326|ref|XP_015872891.1| (PREDICTED: NAC domain-containing protein 90-like [Ziziphus jujuba])

HSP 1 Score: 288.9 bits (738), Expect = 9.5e-75
Identity = 143/259 (55.21%), Postives = 187/259 (72.20%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           E PPGFRFYPTEEEL+SFYL ++L G+  E  RVI +++IY+ EPW+LP+F+GELC GD+
Sbjct: 3   ELPPGFRFYPTEEELVSFYLLNKLEGKRQEIDRVIKIVDIYNIEPWNLPQFSGELCHGDT 62

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQEREARGGRP+RTTA+GYWKATGSP YVYS+ N++IG+KKTMVFYKG+APT
Sbjct: 63  EQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGKAPT 122

Query: 172 GTKTKWKMNEYRAIDD--------STKLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRN 231
           G KTKWKMNEYRAI++        + KLR+EFSLCRVYV+SG FRAFDRRP+EV  + ++
Sbjct: 123 GRKTKWKMNEYRAIEEEGTSTGITTPKLRHEFSLCRVYVVSGSFRAFDRRPLEVTSETQH 182

Query: 232 NAD-------------QKQKAEAITAAIS------CSAPATGFCG-------VSGGSSGM 277
             D             Q Q   A+T++ +       S+P T + G        +GGS+  
Sbjct: 183 QGDTAVTSSQNTAMETQHQGGTAVTSSQNTAMVQKTSSPETSYSGGDRADPREAGGSTDW 242

[Close]
BLAST of Cp4.1LG09g05480 vs. NCBI nr
Match: gi|703120034|ref|XP_010102010.1| (NAC domain-containing protein 90 [Morus notabilis])

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 140/241 (58.09%), Postives = 176/241 (73.03%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           E PPGFRFYPTEEEL+SFYL ++L G+  E +RVI +++IY  EPWDLPK++GELC+GD+
Sbjct: 3   ELPPGFRFYPTEEELVSFYLLNKLEGKREEINRVINVIDIYGIEPWDLPKYSGELCRGDT 62

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQEREARGGRP+RTTA+GYWKATGSP YVYS  +K+IG+KKTMVFYKG+APT
Sbjct: 63  EQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYVYSPDSKVIGVKKTMVFYKGKAPT 122

Query: 172 GTKTKWKMNEYRAID-------DSTKLRYEFSLCRVYVISGCFRAFDRRPMEVIGDGRNN 231
           G KTKWKMNEYRAI+        + KLR+EFSLCRVYVISG FRAFDRRP+EV GD ++ 
Sbjct: 123 GRKTKWKMNEYRAIEAANPDGATTPKLRHEFSLCRVYVISGSFRAFDRRPLEVTGDPQHQ 182

Query: 232 ADQKQKAEAITAAI---------SCSAPATGFCGVSGGSSGMVEDEEIEEANWEWDQIDW 277
            D+   +   T  +         S S       G SG ++    ++++E+   E D++ W
Sbjct: 183 GDRAGPSAQNTTMVEKAGSSSETSSSGDLADPPGASGSNTDWEMNDDLEQTFLELDELQW 242

[Close]
BLAST of Cp4.1LG09g05480 vs. NCBI nr
Match: gi|657997518|ref|XP_008391138.1| (PREDICTED: NAC domain-containing protein 90-like [Malus domestica])

HSP 1 Score: 277.7 bits (709), Expect = 2.2e-71
Identity = 142/246 (57.72%), Postives = 176/246 (71.54%), Query Frame = 1 

Query: 52  EYPPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKFAGELCKGDS 111
           E PPG+RFYPTEEEL+SFYL+++L G+  +  RVIP+++IY  EPWDLPK +GELC+GD 
Sbjct: 3   ELPPGYRFYPTEEELVSFYLQNKLQGKREDTRRVIPIVDIYSKEPWDLPKLSGELCRGDK 62

Query: 112 EQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYVYSAANKIIGLKKTMVFYKGRAPT 171
           EQWFFF  RQ+REA+GGRP+RTTA+GYWKATGSP YVYS+ NK+IG+KKTMVFYKG+APT
Sbjct: 63  EQWFFFTRRQQREAQGGRPNRTTASGYWKATGSPGYVYSSENKVIGVKKTMVFYKGKAPT 122

Query: 172 GTKTKWKMNEYRAI--DDST----KLRYEFSLCRVYVISGCFRAFDRRPMEVIGD----- 231
           G KTKWKMNEYRAI  DDST    KL +EF LCRVYV+SG  RAFDRRP+E +G+     
Sbjct: 123 GRKTKWKMNEYRAIEVDDSTTNTPKLGHEFRLCRVYVVSGSSRAFDRRPLEPVGEAQQKF 182

Query: 232 ----GRNNADQK----QKAEAITAAISCSAPATGFCGVSGG--SSGMVEDEEIEEANWEW 277
               G + +  K    +KA +     S S         S G  SS    +E  EE  WEW
Sbjct: 183 SDSTGASTSSLKTTMVEKASSSDETYSNSGELGDLPETSAGINSSNWEINEGFEEPLWEW 242

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g05480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NAC90_ARATH1.7e-6354.08NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1[more]
NAC61_ARATH3.2e-5448.31Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2... [more]
NAC35_ARATH2.4e-3348.99NAC domain-containing protein 35 OS=Arabidopsis thaliana GN=NAC035 PE=1 SV=2[more]
NAC86_ARATH2.2e-3145.22NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1[more]
NAC14_ARATH3.2e-3047.37NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1[more]
BLAST of Cp4.1LG09g05480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSP7_CUCSA8.3e-10276.05Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165230 PE=4 SV=1[more]
W9RGY6_9ROSA3.6e-7358.09NAC domain-containing protein 90 OS=Morus notabilis GN=L484_016300 PE=4 SV=1[more]
A0A151RN15_CAJCA1.5e-7156.45NAC domain-containing protein 90 OS=Cajanus cajan GN=KK1_034626 PE=4 SV=1[more]
A0A0R0H743_SOYBN2.0e-7155.97Uncharacterized protein OS=Glycine max GN=GLYMA_12G186200 PE=4 SV=1[more]
A0A0B2R106_GLYSO2.0e-7155.97NAC domain-containing protein 90 OS=Glycine soja GN=glysoja_026203 PE=4 SV=1[more]
BLAST of Cp4.1LG09g05480 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22380.19.4e-6554.08 NAC domain containing protein 90[more]
AT3G44350.26.8e-6351.04 NAC domain containing protein 61[more]
AT2G17040.11.9e-3647.20 NAC domain containing protein 36[more]
AT2G02450.21.3e-3448.99 NAC domain containing protein 35[more]
AT1G54330.11.9e-3344.97 NAC domain containing protein 20[more]
BLAST of Cp4.1LG09g05480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443454|ref|XP_004139492.1|1.2e-10176.05PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus][more]
gi|659071658|ref|XP_008461272.1|1.2e-10176.05PREDICTED: NAC domain-containing protein 90-like [Cucumis melo][more]
gi|1009113326|ref|XP_015872891.1|9.5e-7555.21PREDICTED: NAC domain-containing protein 90-like [Ziziphus jujuba][more]
gi|703120034|ref|XP_010102010.1|5.2e-7358.09NAC domain-containing protein 90 [Morus notabilis][more]
gi|657997518|ref|XP_008391138.1|2.2e-7157.72PREDICTED: NAC domain-containing protein 90-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g05480.1Cp4.1LG09g05480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 54..183
score: 3.6
IPR003441NAC domainPROFILEPS51005NACcoord: 53..203
score: 48
IPR003441NAC domainunknownSSF101941NAC domaincoord: 49..201
score: 3.79
NoneNo IPR availablePANTHERPTHR31989FAMILY NOT NAMEDcoord: 36..237
score: 1.6E
NoneNo IPR availablePANTHERPTHR31989:SF4NAC DOMAIN-CONTAINING PROTEIN 61-RELATEDcoord: 36..237
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g05480CmaCh18G006460Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g05480CmoCh18G006760Cucurbita moschata (Rifu)cmocpeB374
Cp4.1LG09g05480Cla003039Watermelon (97103) v1cpewmB048
Cp4.1LG09g05480Cla008633Watermelon (97103) v1cpewmB053
Cp4.1LG09g05480ClCG02G022280Watermelon (Charleston Gray)cpewcgB034
Cp4.1LG09g05480ClCG01G012010Watermelon (Charleston Gray)cpewcgB029
Cp4.1LG09g05480Lsi03G001300Bottle gourd (USVL1VR-Ls)cpelsiB029
Cp4.1LG09g05480Carg26262Silver-seed gourdcarcpeB0000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g05480Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG09g05480Cucumber (Gy14) v1cgycpeB0841
Cp4.1LG09g05480Wild cucumber (PI 183967)cpecpiB017
Cp4.1LG09g05480Cucumber (Chinese Long) v2cpecuB020
Cp4.1LG09g05480Melon (DHL92) v3.5.1cpemeB028
Cp4.1LG09g05480Cucumber (Gy14) v2cgybcpeB007
Cp4.1LG09g05480Melon (DHL92) v3.6.1cpemedB033
Cp4.1LG09g05480Cucumber (Chinese Long) v3cpecucB0024
Cp4.1LG09g05480Wax gourdcpewgoB0050