Cp4.1LG09g04660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g04660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionKatanin p80 WD40 repeat-containing subunit B1 homolog
LocationCp4.1LG09 : 3038654 .. 3048403 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGAGGGAGAGGGAGGGGACACGAAACGTGAAAGCGCCTCACTCTCTTCTCTATCAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTATTATTAATTTTCATTTTGAAATTGAGTTTTGGGTTTCTGTCCTTCTCTGCCTCTCTCTCAAGGAGCTTTTTACTTCGGCGGGATATATGGCCATGGCGGTACCGTTGTAGGTGGAGGAAAGCGAAGTGTTTATCGACGTCGTCTCCGTCGTCTCCGTCTCTTGAACTCTGGCCGACGCTTGAAACTTCGAATTTCTTGTCTCAAATACTGTACTGGTTTTTTCTCTCGCTTGTTTTCGTGTTTTGAAATTTGNTTTTTAATTTCTTGGATTTATTTATGATTATAATTATTTTTGTTTTTGTTGCGGTTTTTGTTAATGTGTGTGAGTGTGGAGGAAGATGAAGGTAGCATGAGTTGGAAGCGTAGCGTGTTGTGCTTTTTTCTTGACTTGCTTGAAGCAAACTGAGGAGTCTTCTTTTCTGGTTTTCTTCTTTGCTTGTTTGTGTGTGTTTTCTTTTTCTATCTTTGATCTGGATGTTGGAGGTTTCTTGATTAATTTTTTTTTTTCCTTTGGAAATTTGTGTTTACAGTGACGTTGCTTGGTGCTGGGAGCGGTGGTAGAAGAGTAGGTGGAGTTTGCTTTTTGAGATCTAAGATGTTGCAGTGGAGATCGTCGGTTCTTGGAAGTAGTTGATGAAGCAGTGTCACTAATTATTGCGCTATTCTCGGATTCAAATTTTTTGGGAATGTGCGCAGTGGAATGCCGCTGTTGCAATTTCAATTTCTAGGTTTTCTTCGCGCTCTGATGCAATTGTGGACCTAAATTCTTTCTTATACATGCCATGACTACCAAACGGGCGTACAAGCTACGTATCCTTTCTCAATGTCCCAGGGTTCATCTAGGGATTTTAAAATCTCAAAATGAAGTGTTGTTATTTCGACTCGATCTGCTTGTATTGCCTTGTTATTTTCGCTTTGCGATTTTCATTTGCGTATCCTCATCAGATCTCTGTGTGAGTGCGAATCTTTTGAGTTCATGGCTTGCTAATTAGAAATGGCCTGCCTTACAATTGGAGGCTGGGGAACGCTCCTACCAGTTTGCCTTAACAATTATTTATACAGAAGAATTTGTGGCTCATTCTTCCGCTGTGAATTGCCTGAAGATTGGGAGGAAGTCATCTCGTGTTCTTGTCACAGGGGGTGAAGATTTCAAAGTCAATCTCTGGGCTATCGGTAAACCCAACGCCATACTGGTATGTTTCATTTTCTGCCGTTAATGGTTTCCTATTCTTCACCTCGGTTACAGTAGAGTACAGAGGTTGTGCTCTATTAATTTCTTCTCAAGTTAACAAAAATATCCTTCGACAAGCCAATTATTTGATATTTTTCTTGCACTTCTAATATTTCTTGTGATAAAAACAACATGCAATTAATTTTATTCACAATTATCTCCCTCCACGTCCAAAAAAAAGAAAAAAAGAAGAAGAATTCCATGCGCACTGTGGTAATTAGGATTTAATAGATACAGATTAGGCTATTTTAAGTTCAAAGAACATTGATGCAGACTCGCTTAAACCAAGTACCTAAAGGTGCGGTGTTTGTAATATCATTTTTCTTTGCACTTACGCTTAGTTGTACTTTCACATCCAGAGTTTGACTGGCCATACGAGTGGAATAGATTCTGTAAGCTTTGACTCATCAGAAGTATTGGTAGCTGCAGGGGCTGCTAGTGGCACAATTAAGCTTTGGGATTTGGAGGAGGCTAAAAGTATGCTTTCAATTACCTCAACATATTTCCTTCATCTTTATTGACAGTTTCCAATATTGTAATGTTGATTTCCTTGGATAATTGTACTGTGGAGTTGACTTGTATCTTTCATTTTCTGGATTCCTCCTGTGATATTTCCTAGTTGTTCGAACACTTACTGGTCATAGATCCAATTGCATTTCTGTGGATTTTCATCCCTTTGGGGAATTCTTTGCTTCTGGATCCTTGGATACAAATCTTAAGATATGGGATATCAGGAAGAAAGGATGTATCCACACATACAAAGGTCACACTCGAGGGGTCAATGCAATCAGATTTACTCCAGATGGTCGTTGGGTTGTATCTGGTGGAGAAGACAACACGGTGAAGGTTAGAAATCGTTTTCCTTGTAGTTCAGTTTCATGATATCACTGTCTTTTTTTGGAAGAGAGTAGCAAGTTTTTTCCCGATCAAACCTATGGAGCAAGTGTAACCATATTAGTCTCATTTCTCATACCAGAAAAAATATTGACCTTATTAACCATTTTGTGATTTGTTTTTGGTCCTCACTAACAAAGGAGTCCGTAATACCTTTCCTTCATTAGCTCTTCTCTGTATTTCCCCTGGTTATAGAGATAGTTTGGAGCTAGGAATCTAGTCCCCATTCTTTTATAAATCTCTAGTAATGTTGTTTATACAATTTGTTTATTTGAATTTTTTTCCTCGATTATCTTCCTAGAAGTGTCTAAGCATTGGGCACAAACGACTTTGATGTATTGCTTGGAGCCAAGTGAGCTGTCTTGTACTAGTGTTTCATCATTTGCTTAGATGTGCTCACCAAGGACAAGTCGCTTAACACTCTGACTGTTTTCTTAGTTCTTTTTTTTTTCACATGCCTGACACTCTCTAGCCTTTGTCCTCTTTAGCTGTTTTTCTCCTTTATTTTACCAGCAGGTGATATTCATGTGCTTAAATGGTATATGTTTGATCTCTTATATATATCGAATGCTTTAGTTCAGTTAGGTTTGTACATCACTTTGTACCATACACACCTAGCCATGAAGGAGCTTGTGTGTGGAAAAACATTGGTCTTGTTTTTGGTGTTTGATGGAGAAGAATGAAACTATTGATAGATGGTGATTTTGAGTTTTCATTGTGTGTTGGTTTAAACCATCTCCTGTGAGTTCTTTTGTTGTGGGTTCTTCCTTTTGACTTATTCACTGGTTTTTGTGGCCTATGTGGATTTCAGCCAAATTGGGTCAGTTGTGGGTTTTGTTGGTGGGAAACTATAAAAGATTAGTTGAATGCAAATTTGATAGTGCTTATCTTATTGCTTGTTGAGTTAAATTTTTAGTTTTTGAGTTACATACAGTTTTGATGAAGTTCTTTTTCTCTATTGTATAAATTGTATTAATAATTGTATATTTATTATGTAATTTCTAGAAAATTGGACATTTTATTCTCATGCAAAATCTGTAATTTTATTTTCAACGAATTATCGTTTCCTATTAAAAAGAGCCTTCTAATATATCTTATTTTAACAGCTCTGGGATCTGACTGCTGGAAAGTTGTTGCATGATTTCAAGTGCCACGAGGGTCAGGTTCAGTGTATAGACTTTCACCCTCATGAGTTTCTGCTGGCCACAGGTTTGTTATGCACTTTTGCCTTTGTCTCTCTTCTCCTCTCTCTTTCTTGCCCATAGAATCATTAACAATATTTAAAGAATGTGTAAATGCTTATATATTTCTTTCTCATCGAGAAAGAGGGAAAGAAAAATGTTTGTTCTCGACCAGTTTGAATGACAACCAAGCTACAAGGGTGTTTTCTTAATACCTCCCTCTCTTTCTACCCTGGGATACAATAGTGTTTGTAGTTTTGATCTTTTTTTCATTTACAGTTGGGCAGATGGGGCTCCTTTTTCGTATTTTTGAACACATTTTTCTCTTATTGTTTTATTTTATTTTTCTTTCTATATTTTAGTCAAGATACAAGAGGAGGTATCTAGCCACCGAATTGAGATGGTTGCCAAGGCCCTCTGGGAACTTTCATCAAACGATGTTTTATGTAGCCTTACTAGTCAAAGATGGTCAACTTGTCTTAATTCAAGTTTTCCAATTTTCTAATGTAATGGCTTTTTGTCCAAGTATGAATATGAAAGTACAAAAAGACGATGAGATATCCATACAAGGAGAAAAATAATTAATTTTGTATCAGAAAGAAGATTTAAATTTCATTGGCAGTTGGCCAGTGTACTGATATGGAAAAAAAACAATTGTGTGAAAAATTTTAATTAGCTAATTTTGCATATATGAAACACTAGATCTGCTTGTTATTAAATCCTGTCTTAATTTTCTTTTTGTCGATCAGGTTCAGCAGATAAAACCGTTAAATTTTGGGACCTGGAAACCTTTGAGTTGATTGGTTCAGCTGGACCTGAGGTACTTGTCAAATGAATTTTTATTTCTCTGGCGTTTGAATAACTATACGTAAGGGAGAGCATTTTTGTCGATGACTGCCTTTTATTTTCTTTTGAGACATCTCGTATTCTTGTTTCTGCGTCAGACCAGTGGAGTCCGTTGTTTAACTTTTAATCCTGATGGGAGGACACTGCTTTGTGGATTGCATGAAAGTCTGAAGGTAACTTCCTTTTTTGTGCAAATGGTTTTTCATCTCTATAGAACAACATCTTTTTCAATTTTTGTTTCACATTTATACAATGGTGCTACGTAATAGGTTTTCTCATGGGAACCAATACGATGTCATGATGGAGTGGAAGTTGGTTGGTCTAGGCTGTCTGATCTTAATGTTCACGAGGGAAAACTTCTTGGCTGTTCATACAATCAGAACTGTGTTGGAGTGTGGGTTGTAGACATTACGGTACAATGATCATACGTACTCTGTATAGAGATAGGCCATTTTATTCTTCCAGGTTGTTTGCGTTTCTTTTTAACTCAATGTAATTTTGTTTCATTGCCTCTTGCACAGCGTACAGAGCCCTATGCAATTAATAACGTTAACAGATTAAATGGTCGCTCAGAACCTAAATCCAGCAGTAATCTATCACTGCAAAATGAGAACAATGCCAAGGCTAATTTTGGTGGATTATCAGTATCACAAACTTCTGATCCACTATTGAAGGAAACTAAAACATTGGGAAGATTGTCAGTTTCTCAAAATGCCGATGTCAAGGATCCAAAACCGTTGTCATGTAAGTAATTTCCTTATCTTGTCTTTTTTGTTGTCATTTGTAGGATTTCACTATTACTTCTTATTGTTACTTTTTAGAACTACCCGTTGTATTGAATTATCTTTTTTTATTGGCACAACCTCTCCATTTATAGAACATGGAGTCTTGGAGTATACATCATTGATTTTCTTTTTTGTACTGATTGAAGCCACAGGAAATGGGCCAAGTACTCCCCAAAGGGTCAGTTCAAATGCTGGCCCAAAGGCTAATTCGGTTAGCTCGGTGGCAGTACCTAATGCAGTGGTACCAAAGAGAAACTCTGTGAAGGCCACTTCAACATTCAACAACCCTATCTTCAATAAATCAGATGTGATACCTGTAATTGTACCCAGGACAAATTCAAGGCATGAGCAGGATGAATCTAGAAAGGATTTTGATGTTGCTGGAAGGGCAATGCCACTACCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAATGCCACTACCCAGGACAAATTCAAGACATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGAACAATGCCACTTCCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGGGCAATGCCACTTACAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAACTTGATGTTGCTGGAAGAGCAGTTCCAGCACCATTGCTATCAAAAACTACTGATACTAATAGGAGGTTTCCAAGTGGTAGAGATGAAGTTGATAATTCAACTATCTCTATCCTTTCTGAATCCAGAGGTTTGAAGGCTGCTGATATGAGCAACATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAAGGAGTATCTGCTCCACAGAAGATTGTAAAAGAAGAAAGACATATTGGATCTGGTAAGAATGAAACAGAAACAAAAGAGTCAACGGCAAGCTACAAACACGAAGGTATTATCTGTTACATTATGTAGTAACCATTTTATATCATCAATTTTCAACTTACGGCAGTTGCTACCTCACTGATGAGTCTATTATCTGTTAATTTAGTCTTTTGATTTATGTGATTTCATATTTGTTCATACTCATTTGATTGGAACAACTGACCATGTTTATGATANGCAGGATGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAATGCCACTACCCAGGACAAATTCAAGACATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGAACAATGCCACTTCCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGGGCAATGCCACTTACAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAACTTGATGTTGCTGGAAGAGCAGTTCCAGCACCATTGCTATCAAAAACTACTGATACTAATAGGAGGTTTCCAAGTGGTAGAGATGAAGTTGATAATTCAACTATCTCTATCCTTTCTGAATCCAGAGGTTTGAAGGCTGCTGATATGAGCAACATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAAGGAGTATCTGCTCCACAGAAGATTGTAAAAGAAGAAAGACATATTGGATCTGGTAAGAATGAAACAGAAACAAAAGAGTCAACGGCAAGCTACAAACACGAAGGTATTATCTGTTACATTATGTAGTAACCATTTTATATCATCAATTTTCAACTTACGGCAGTTGCTACCTCACTGATGAGTCTATTATCTGTTAATTTAGTCTTTTGATTTATGTGATTTCATATTTGTTCATACTCATTTGATTGGAACAACTGACCATGTTTATGATAGGTTGCGGTAACCATGTTGCATGTTTATTTGGAGGTTTTTTGGGCTATGATCATGATGTCATTTGCATGTCTTTGTTTTGGCTCGCCAGTTTTAGTCTATCAACATACTTTTGATGTTCTCCTATTTCTTTGTGTTCTCTCTTTTTTCTAGATGAATCTCAAGGGCATAAAATAAGCAGAGATGGAGCTTTTCCAGAAGCTACAAGAGGAGGTTTTGTCATATTTAGTTATTGATTTTTTTTTCTCTTGACAACAACTGATGCCTTACATTTAAAAAGTGGTTATGTTTCAGGGAGAATGCGTTCTCGTGTAGATTGGGAGAAAAGAGAAAGAGCTAATTTTAGCCGGTCAACATTTAATGCCTCCCCTGGAAGAGCAGCTGCATTGGACAGTCTTCCACTAAATAACGGGGTATGACCGAATTTGAATTGAACTATTTTTCTTGTTCGTAAGTGTATATCCCTTTTCATGACCGTACTATGGCCAAGAACTGGTACATTACGACGAGTTGTAACTTCCTTGAAATGTGATTGATTGTGGATTGTGAAAATAACTGTGACTAAAAAGTTAATGACATACTGATTAAAAATTTTGAACTCTCACGGGGTCTTACTCTTTTGTTCTCTTCTTTAATCCAACTTTTTTACAGAGAGGTTATCGTCGATCTCCGGAGAAGGAAACAGTAGCACCTACAAGCGATGAGGATATCATAGCAAATGTTCTACAACAACATGATCAATTCATCAACTCGATGCAATCTCGTTCAGCAAAATTGCAAGTAATGACAGCCTTCAATTCTAAACCAACACATGCTTACGTTTGCAAACAATTAACTCGTATTTTACACATTTATCATGTTAAATGCATCAGCAAAATTGCCTGTATGAATAAATTTGTATTACACTTTTGTTAAATTCTCATCATTATTTTAGAACATAATGGATAGAGTTTTTCAAGAAACTTTTTGAGGCCTTACTTCACTTGGAAAGTTACATGAGTTGGCATTGTCGAATCAGAGTGTAGTATTCATTAAAGCGTAAAAAGCATTATTGCTCAATTCGTGTAACATGTAATCATGAGATTCTCGACATCTGCCCGCTGGCTTTGTTGTCAGTCGCTTGCTGCAGTTGAAGTTTAAGCTTGATGATGATGTGCACGTTTTTGCATCTTATTCTTTTTATAGGCAGTCTATAGATATTGGGAAAGACATGACATTAAAGGGGCGGTGTCTGCGATGGAGAAAATGGCTGATCATGCAGTAAGTATATCTTGTTCTTTGAAGTGGAATAAAGTTTTTTTTTTTTTAATTAGTATTTTCTGAGTTTAGCTTCTTTAACTCGGATCGGATTGCTGTTGATGCAGGTTGCTGCTGATGTAATTAGTATTTTGACCGACAAAATTGAAGTCATCACTCTGGATATCTGCTGTTGTATTCTGCCAGTTCTTTCTAGCCTCCTTGAAAGTGACTTGGATAGGTTTCATCTCTCTCTCTCTCTCTCTCACGGGCTCCTGCACACATTCAAAAGGGCTACACCTGCAAATTTCCATATTTGATAAATTTTTTCTATGGTTTTCGGTTTTGAAAAACTTATTTTGTGACTTTAAGGCTGTAGACTCGCAAACTTCAGACATTTACTTGAATTTGAAGCTTTCTTTTTTAGACAAAAGTTGAATTACTCATTTCATTTCATTTCATTTCCTGGAACTATAGGTTTTTGGACATTGCTATGGAAATGCTTCTTAAGCTGGTGAGGACGTTCGGTTCGGTGATTTATTCAACGTTATCGGCAACTTCATCTGTCGGCGTAAATATTGAGGCAGAGCAAAGGTATCTTACAACTTTTTTCTTTTTATTAGTTTAGAACTTATTTAGATATCATGTCTTGATTGTGTAAAATGGGCGTTTCTAGGTTGGAGCGATGCAATCTCTGCTTCATCGAGCTTGAAAAAGTCAAGCGCTGCCTGCCAGCCCTCATAAGGTATCTCTAACTCCATCTAATTTATAGCTTGAACTAAAAGCACTTTATAACTAATTTTAGAAGCACTAATTAAAATGCTCTTAAATAGCATGGTCTTTTTAGAAAAGGACACTCATATAACCTTCCAAAATTACTCCTCTATTATATTAAGGTATTTGAATAAAAAAATAAAGTTAATTTATGATTTATTTGAAATTACACAAGTTTTAGAAATATTAAAAAAATTATCTTTTACTCGATTTTTATTTGCGAACTTCAGAAAACACTGTTAATGCACACCATTTCTGCATGTTTTTTTCTTTTCTTTTTCCAAAACTTTATGGCTCCCTAAACTTTTGGGACAATTATGCGATTGCGGTACCCTTATTTTTGTTTTGGCACAGAAAAAGGGGATCGGTAGCAAAGTCAGCACAGGAGTTGAATCTCGCACTGCAGGAATTTCAGTGACAAAAGAAGAATAAGGAGAGTAGAGGACTTTTAGTATCCTCTCCGTATGGGTTGCCTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCCCATATTGAAGATTGAAACACTCTTTCCTATGGAACAATCTGTTGTGAGGGTGGTGGGTAAAAGAGGTAAAACGGGAGCTCTGCTGTTCTTTGAGAGAATGTGCCATTTTCCCATAGCACATGATCTAACCTACTTTCATCCTCCTCCTTCGGCTTCGCCTTCATCTTCGCCTTCATCTTCATCTTTGGTCGATAGAAGTAAAAGTACGTACAGGGCATTTTTATTGACGACTGGCTAATTCTGCACATACCGAAACAGAGAAAAGCTAATGTAGTAGGAGTTAGGAGTT

mRNA sequence

GGGGAGGGAGAGGGAGGGGACACGAAACGTGAAAGCGCCTCACTCTCTTCTCTATCAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTATTATTAATTTTCATTTTGAAATTGAGTTTTGGGTTTCTGTCCTTCTCTGCCTCTCTCTCAAGGAGCTTTTTACTTCGGCGGGATATATGGCCATGGCGGTACCGTTGTAGGTGGAGGAAAGCGAAGTGTTTATCGACGTCGTCTCCGTCGTCTCCGTCTCTTGAACTCTGGCCGACGCTTGAAACTTCGAATTTCTTGTCTCAAATACTTGACGTTGCTTGGTGCTGGGAGCGGTGGTAGAAGAGTAGGTGGAGTTTGCTTTTTGAGATCTAAGATGTTGCAGTGGAGATCGTCGGTTCTTGGAAGTAGTTGATGAAGCAGTGTCACTAATTATTGCGCTATTCTCGGATTCAAATTTTTTGGGAATGTGCGCAGTGGAATGCCGCTGTTGCAATTTCAATTTCTAGGTTTTCTTCGCGCTCTGATGCAATTGTGGACCTAAATTCTTTCTTATACATGCCATGACTACCAAACGGGCGTACAAGCTACAAGAATTTGTGGCTCATTCTTCCGCTGTGAATTGCCTGAAGATTGGGAGGAAGTCATCTCGTGTTCTTGTCACAGGGGGTGAAGATTTCAAAGTCAATCTCTGGGCTATCGGTAAACCCAACGCCATACTGAGTTTGACTGGCCATACGAGTGGAATAGATTCTGTAAGCTTTGACTCATCAGAAGTATTGGTAGCTGCAGGGGCTGCTAGTGGCACAATTAAGCTTTGGGATTTGGAGGAGGCTAAAATTGTTCGAACACTTACTGGTCATAGATCCAATTGCATTTCTGTGGATTTTCATCCCTTTGGGGAATTCTTTGCTTCTGGATCCTTGGATACAAATCTTAAGATATGGGATATCAGGAAGAAAGGATGTATCCACACATACAAAGGTCACACTCGAGGGGTCAATGCAATCAGATTTACTCCAGATGGTCGTTGGGTTGTATCTGGTGGAGAAGACAACACGGTGAAGCTCTGGGATCTGACTGCTGGAAAGTTGTTGCATGATTTCAAGTGCCACGAGGGTCAGGTTCAGTGTATAGACTTTCACCCTCATGAGTTTCTGCTGGCCACAGGTTCAGCAGATAAAACCGTTAAATTTTGGGACCTGGAAACCTTTGAGTTGATTGGTTCAGCTGGACCTGAGACCAGTGGAGTCCGTTGTTTAACTTTTAATCCTGATGGGAGGACACTGCTTTGTGGATTGCATGAAAGTCTGAAGGTTTTCTCATGGGAACCAATACGATGTCATGATGGAGTGGAAGTTGGTTGGTCTAGGCTGTCTGATCTTAATGTTCACGAGGGAAAACTTCTTGGCTGTTCATACAATCAGAACTGTGTTGGAGTGTGGGTTGTAGACATTACGCGTACAGAGCCCTATGCAATTAATAACGTTAACAGATTAAATGGTCGCTCAGAACCTAAATCCAGCAGTAATCTATCACTGCAAAATGAGAACAATGCCAAGGCTAATTTTGGTGGATTATCAGTATCACAAACTTCTGATCCACTATTGAAGGAAACTAAAACATTGGGAAGATTGTCAGTTTCTCAAAATGCCGATGTCAAGGATCCAAAACCGTTGTCATCCACAGGAAATGGGCCAAGTACTCCCCAAAGGGTCAGTTCAAATGCTGGCCCAAAGGCTAATTCGGTTAGCTCGGTGGCAGTACCTAATGCAGTGGTACCAAAGAGAAACTCTGTGAAGGCCACTTCAACATTCAACAACCCTATCTTCAATAAATCAGATGTGATACCTGTAATTGTACCCAGGACAAATTCAAGGCATGAGCAGGATGAATCTAGAAAGGATTTTGATGTTGCTGGAAGGGCAATGCCACTACCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAATGCCACTACCCAGGACAAATTCAAGACATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGAACAATGCCACTTCCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGGGCAATGCCACTTACAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAACTTGATGTTGCTGGAAGAGCAGTTCCAGCACCATTGCTATCAAAAACTACTGATACTAATAGGAGGTTTCCAAGTGGTAGAGATGAAGTTGATAATTCAACTATCTCTATCCTTTCTGAATCCAGAGGTTTGAAGGCTGCTGATATGAGCAACATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAAGGAGTATCTGCTCCACAGAAGATTGTAAAAGAAGAAAGACATATTGGATCTGGTAAGAATGAAACAGAAACAAAAGAGTCAACGGCAAGCTACAAACACGAAGTTGCTACCTCACTGATGAGTCTATTATCTGATGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAATGCCACTACCCAGGACAAATTCAAGACATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGAACAATGCCACTTCCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGGGCAATGCCACTTACAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAACTTGATGTTGCTGGAAGAGCAGTTCCAGCACCATTGCTATCAAAAACTACTGATACTAATAGGAGGTTTCCAAGTGGTAGAGATGAAGTTGATAATTCAACTATCTCTATCCTTTCTGAATCCAGAGGTTTGAAGGCTGCTGATATGAGCAACATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAAGGAGTATCTGCTCCACAGAAGATTGTAAAAGAAGAAAGACATATTGGATCTGGTAAGAATGAAACAGAAACAAAAGAGTCAACGGCAAGCTACAAACACGAAGATGAATCTCAAGGGCATAAAATAAGCAGAGATGGAGCTTTTCCAGAAGCTACAAGAGGAGGGAGAATGCGTTCTCGTGTAGATTGGGAGAAAAGAGAAAGAGCTAATTTTAGCCGGTCAACATTTAATGCCTCCCCTGGAAGAGCAGCTGCATTGGACAGTCTTCCACTAAATAACGGGAGAGGTTATCGTCGATCTCCGGAGAAGGAAACAGTAGCACCTACAAGCGATGAGGATATCATAGCAAATGTTCTACAACAACATGATCAATTCATCAACTCGATGCAATCTCGTTCAGCAAAATTGCAAGCAGTCTATAGATATTGGGAAAGACATGACATTAAAGGGGCGGTGTCTGCGATGGAGAAAATGGCTGATCATGCAGTTGCTGCTGATGTAATTAGTATTTTGACCGACAAAATTGAAGTCATCACTCTGGATATCTGCTGTTGTATTCTGCCAGTTCTTTCTAGCCTCCTTGAAAGTGACTTGGATAGGTTTTTGGACATTGCTATGGAAATGCTTCTTAAGCTGGTGAGGACGTTCGGTTCGGTGATTTATTCAACGTTATCGGCAACTTCATCTGTCGGCGTAAATATTGAGGCAGAGCAAAGGTTGGAGCGATGCAATCTCTGCTTCATCGAGCTTGAAAAAGTCAAGCGCTGCCTGCCAGCCCTCATAAGAAAAAGGGGATCGGTAGCAAAGTCAGCACAGGAGTTGAATCTCGCACTGCAGGAATTTCAGTGACAAAAGAAGAATAAGGAGAGTAGAGGACTAAGTAAAAGTACGTACAGGGCATTTTTATTGACGACTGGCTAATTCTGCACATACCGAAACAGAGAAAAGCTAATGTAGTAGGAGTTAGGAGTT

Coding sequence (CDS)

ATGACTACCAAACGGGCGTACAAGCTACAAGAATTTGTGGCTCATTCTTCCGCTGTGAATTGCCTGAAGATTGGGAGGAAGTCATCTCGTGTTCTTGTCACAGGGGGTGAAGATTTCAAAGTCAATCTCTGGGCTATCGGTAAACCCAACGCCATACTGAGTTTGACTGGCCATACGAGTGGAATAGATTCTGTAAGCTTTGACTCATCAGAAGTATTGGTAGCTGCAGGGGCTGCTAGTGGCACAATTAAGCTTTGGGATTTGGAGGAGGCTAAAATTGTTCGAACACTTACTGGTCATAGATCCAATTGCATTTCTGTGGATTTTCATCCCTTTGGGGAATTCTTTGCTTCTGGATCCTTGGATACAAATCTTAAGATATGGGATATCAGGAAGAAAGGATGTATCCACACATACAAAGGTCACACTCGAGGGGTCAATGCAATCAGATTTACTCCAGATGGTCGTTGGGTTGTATCTGGTGGAGAAGACAACACGGTGAAGCTCTGGGATCTGACTGCTGGAAAGTTGTTGCATGATTTCAAGTGCCACGAGGGTCAGGTTCAGTGTATAGACTTTCACCCTCATGAGTTTCTGCTGGCCACAGGTTCAGCAGATAAAACCGTTAAATTTTGGGACCTGGAAACCTTTGAGTTGATTGGTTCAGCTGGACCTGAGACCAGTGGAGTCCGTTGTTTAACTTTTAATCCTGATGGGAGGACACTGCTTTGTGGATTGCATGAAAGTCTGAAGGTTTTCTCATGGGAACCAATACGATGTCATGATGGAGTGGAAGTTGGTTGGTCTAGGCTGTCTGATCTTAATGTTCACGAGGGAAAACTTCTTGGCTGTTCATACAATCAGAACTGTGTTGGAGTGTGGGTTGTAGACATTACGCGTACAGAGCCCTATGCAATTAATAACGTTAACAGATTAAATGGTCGCTCAGAACCTAAATCCAGCAGTAATCTATCACTGCAAAATGAGAACAATGCCAAGGCTAATTTTGGTGGATTATCAGTATCACAAACTTCTGATCCACTATTGAAGGAAACTAAAACATTGGGAAGATTGTCAGTTTCTCAAAATGCCGATGTCAAGGATCCAAAACCGTTGTCATCCACAGGAAATGGGCCAAGTACTCCCCAAAGGGTCAGTTCAAATGCTGGCCCAAAGGCTAATTCGGTTAGCTCGGTGGCAGTACCTAATGCAGTGGTACCAAAGAGAAACTCTGTGAAGGCCACTTCAACATTCAACAACCCTATCTTCAATAAATCAGATGTGATACCTGTAATTGTACCCAGGACAAATTCAAGGCATGAGCAGGATGAATCTAGAAAGGATTTTGATGTTGCTGGAAGGGCAATGCCACTACCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAATGCCACTACCCAGGACAAATTCAAGACATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGAACAATGCCACTTCCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGGGCAATGCCACTTACAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAACTTGATGTTGCTGGAAGAGCAGTTCCAGCACCATTGCTATCAAAAACTACTGATACTAATAGGAGGTTTCCAAGTGGTAGAGATGAAGTTGATAATTCAACTATCTCTATCCTTTCTGAATCCAGAGGTTTGAAGGCTGCTGATATGAGCAACATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAAGGAGTATCTGCTCCACAGAAGATTGTAAAAGAAGAAAGACATATTGGATCTGGTAAGAATGAAACAGAAACAAAAGAGTCAACGGCAAGCTACAAACACGAAGTTGCTACCTCACTGATGAGTCTATTATCTGATGATTCTAGAAAGGATTTTGATGTTGCTGGAAGAGCAATGCCACTACCCAGGACAAATTCAAGACATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGAACAATGCCACTTCCCAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAATTGGATGTTGCTGGAAGGGCAATGCCACTTACAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAACTTGATGTTGCTGGAAGAGCAGTTCCAGCACCATTGCTATCAAAAACTACTGATACTAATAGGAGGTTTCCAAGTGGTAGAGATGAAGTTGATAATTCAACTATCTCTATCCTTTCTGAATCCAGAGGTTTGAAGGCTGCTGATATGAGCAACATTGCAGATAATAGGAATTCCTTGCATGGTATTGGTTCAATTCAAGGAGTATCTGCTCCACAGAAGATTGTAAAAGAAGAAAGACATATTGGATCTGGTAAGAATGAAACAGAAACAAAAGAGTCAACGGCAAGCTACAAACACGAAGATGAATCTCAAGGGCATAAAATAAGCAGAGATGGAGCTTTTCCAGAAGCTACAAGAGGAGGGAGAATGCGTTCTCGTGTAGATTGGGAGAAAAGAGAAAGAGCTAATTTTAGCCGGTCAACATTTAATGCCTCCCCTGGAAGAGCAGCTGCATTGGACAGTCTTCCACTAAATAACGGGAGAGGTTATCGTCGATCTCCGGAGAAGGAAACAGTAGCACCTACAAGCGATGAGGATATCATAGCAAATGTTCTACAACAACATGATCAATTCATCAACTCGATGCAATCTCGTTCAGCAAAATTGCAAGCAGTCTATAGATATTGGGAAAGACATGACATTAAAGGGGCGGTGTCTGCGATGGAGAAAATGGCTGATCATGCAGTTGCTGCTGATGTAATTAGTATTTTGACCGACAAAATTGAAGTCATCACTCTGGATATCTGCTGTTGTATTCTGCCAGTTCTTTCTAGCCTCCTTGAAAGTGACTTGGATAGGTTTTTGGACATTGCTATGGAAATGCTTCTTAAGCTGGTGAGGACGTTCGGTTCGGTGATTTATTCAACGTTATCGGCAACTTCATCTGTCGGCGTAAATATTGAGGCAGAGCAAAGGTTGGAGCGATGCAATCTCTGCTTCATCGAGCTTGAAAAAGTCAAGCGCTGCCTGCCAGCCCTCATAAGAAAAAGGGGATCGGTAGCAAAGTCAGCACAGGAGTTGAATCTCGCACTGCAGGAATTTCAGTGA

Protein sequence

MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITRTEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSVSQNADVKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTNSRHEQDESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSNIADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEVATSLMSLLSDDSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSNIADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEDESQGHKISRDGAFPEATRGGRMRSRVDWEKRERANFSRSTFNASPGRAAALDSLPLNNGRGYRRSPEKETVAPTSDEDIIANVLQQHDQFINSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTDKIEVITLDICCCILPVLSSLLESDLDRFLDIAMEMLLKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ
Homology
[Close]
BLAST of Cp4.1LG09g04660 vs. Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3)

HSP 1 Score: 681.8 bits (1758), Expect = 1.2e-194
Identity = 350/499 (70.14%), Postives = 388/499 (77.76%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+Q +DFHPHEFLLATGSAD+TVKFWDLETFELIGS GPET+GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGL ESLK+FSWEPIRCHDGV+VGWSRLSD+NVHEGKLLGCSYNQ+CVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLS--LQNENNAKA-------------------NFGGL 360
           TEP    +  + NG  E +S S     + N+NN+K                    + G L
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 SVSQTSDPLLKETKT-------------------LGRLSVSQNADV-KDPKPLSSTGNGP 420
           SVSQ SDP  KETK+                   LGRLSVSQN+DV K+ +  SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTNSR 458
            TP RVSS    KA S  S AV NA   +RN  KA     NP+   +D  PVIVPR + R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

[Close]
BLAST of Cp4.1LG09g04660 vs. Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.9e-111
Identity = 197/374 (52.67%), Postives = 256/374 (68.45%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRA+KLQE VAHSS VNCL +G  S RV+VTGGED KVNLWA+GK N I+SL+GHTS
Sbjct: 1   MATKRAWKLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
            +DSV F+SSE LV AG+ SGT+K++DLE AKIVRTLTGHR++   +DFHPFGEF ASGS
Sbjct: 61  PVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTN+K+WD+R+KGCI+TYKGH+  VN I+F+PDG+W+V+  ED T+KLWDLT GKL  +
Sbjct: 121 TDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK H G V  I+FHP+EFLLA+GS+D+TV+FWDLETF+L+ S  P  S VR ++F+PDG 
Sbjct: 181 FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHPDGS 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
            L C   + L  F WEPIRC D   VGW +++D  +   +L+G S+N   V V+V D++R
Sbjct: 241 YLFCSSQDMLHAFGWEPIRCFDTFSVGWGKVADTVIASTQLIGASFNATNVSVYVADLSR 300

Query: 301 TEPYAINNVNRL------NGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKT 360
                I    +       +G +E   S  L+     N        + S+   P +K    
Sbjct: 301 MSTTGIAQEPQSQPSKTPSGGAEEVPSKPLTASGRKNFVRERPHTTSSKQRQPDVKSEPE 360

Query: 361 LGRLSVSQNADVKD 369
             R S +Q+  VKD
Sbjct: 361 --RQSPTQDEGVKD 372

[Close]
BLAST of Cp4.1LG09g04660 vs. Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.1e-102
Identity = 157/300 (52.33%), Postives = 230/300 (76.67%), Query Frame = 1 

Query: 3   TKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGI 62
           TK  +KLQE VAH S+V+ + +G+ S R++ TGG+D +VNLW++ KPN I+SLTGHT+ +
Sbjct: 7   TKTTWKLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPV 66

Query: 63  DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
           +SV F+++E L+ AG+ SG++++WDLE AKI+RTL GH++N  S+DFHP+G+F ASGSLD
Sbjct: 67  ESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLD 126

Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
           TN+K+WD+R+KGC+  YKGHT+ V  +RF+PDG+W+ S  +D++VKLWDLTAGK++ +  
Sbjct: 127 TNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELS 186

Query: 183 CHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
            H+G V  I+FHP+E+LLA+GSAD+TV+FWDLE F+LIG    ET  VR + F+ DG  +
Sbjct: 187 EHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCI 246

Query: 243 LCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITRTE 302
            CG  ++L+V+ WEP +C D V VGW ++ DL +   +L+G S  Q+ +  +VVD+TR +
Sbjct: 247 FCGGRDALRVYGWEPDQCFDTVPVGWGKVCDLAICNKQLIGVSSAQSTISSFVVDLTRVK 306

[Close]
BLAST of Cp4.1LG09g04660 vs. Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.5e-102
Identity = 159/300 (53.00%), Postives = 228/300 (76.00%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           + TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SLTGHTS
Sbjct: 5   VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
            ++SV  ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N  S+DFHP+GEF ASGS
Sbjct: 65  PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTN+K+WDIR+KGC+  Y+GH++ V  +RF+PDG+W+ S  +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           F  H G V  ++FHP+E+LLA+GS+D+T++FWDLE F+++     E   VR + FNPDG 
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC 244

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
            L  G  +SL+V+ WEP RC D V V W +++DL +   +L+G +++Q+ V  +VVD+TR
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTR 304

[Close]
BLAST of Cp4.1LG09g04660 vs. Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.5e-102
Identity = 159/300 (53.00%), Postives = 228/300 (76.00%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           + TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SLTGHTS
Sbjct: 5   VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
            ++SV  ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N  S+DFHP+GEF ASGS
Sbjct: 65  PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTN+K+WDIR+KGC+  Y+GH++ V  +RF+PDG+W+ S  +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           F  H G V  ++FHP+E+LLA+GS+D+T++FWDLE F+++     E   VR + FNPDG 
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC 244

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
            L  G  +SL+V+ WEP RC D V V W +++DL +   +L+G +++Q+ V  +VVD+TR
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTR 304

[Close]
BLAST of Cp4.1LG09g04660 vs. TrEMBL
Match: A0A0A0KPN4_CUCSA (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis sativus GN=Csa_5G580650 PE=3 SV=1)

HSP 1 Score: 1082.0 bits (2797), Expect = 0.0e+00
Identity = 567/719 (78.86%), Postives = 595/719 (82.75%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSV 360
           TEPYA+NN NRLNGR EPKSSS+L  QNENN K +FGGLSVSQTSD LLKETKTLGRLSV
Sbjct: 301 TEPYAVNNANRLNGRPEPKSSSHL--QNENNTKTSFGGLSVSQTSDALLKETKTLGRLSV 360

Query: 361 SQNADV-KDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFN 420
           SQN+DV KDPK LSSTGNGPSTPQ+++ NAG K N VSS AVP+AVVPKRNSVKATSTFN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTNSRHEQDESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVAGR 480
           NPIFNKSDVIPVIVPRT+SRH                         EQDDSRK+FDVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRH-------------------------EQDDSRKEFDVAGR 480

Query: 481 AMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSR 540
           A                         +P+ RTNSR EQDDSRKE DVA R MPL+R+NSR
Sbjct: 481 A-------------------------VPVSRTNSRQEQDDSRKEFDVAARVMPLSRSNSR 540

Query: 541 HEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSN 600
           HEQDDSRKE DVAGRA PAPLLSKTTD NRRFP+ RDEVDN TIS+LSESRGLKA DMS 
Sbjct: 541 HEQDDSRKECDVAGRAAPAPLLSKTTD-NRRFPNSRDEVDNPTISVLSESRGLKANDMST 600

Query: 601 IADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEVATSLMSLLSD 660
           IADNRNSLHGIGSIQGVSAPQKIVKEER+IGSGKNETETK++TA+YKHE  +    +  D
Sbjct: 601 IADNRNSLHGIGSIQGVSAPQKIVKEERYIGSGKNETETKDTTANYKHEDESRGHKISRD 660

Query: 661 DSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVA-GRTMPL---PRTNSRHEQDDSRKE 715
            S  +    GR         R   + SR   + + GR   L   P  N R  +    KE
Sbjct: 661 ASFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRGYRPSPEKE 666

[Close]
BLAST of Cp4.1LG09g04660 vs. TrEMBL
Match: A0A0B0NWJ1_GOSAR (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Gossypium arboreum GN=F383_04189 PE=3 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 8.8e-240
Identity = 433/652 (66.41%), Postives = 508/652 (77.91%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS+VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL+GHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN IRFTPDGRWVVSGGEDN VK+WDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNTIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+QC+DFHPHEFLLATGSAD+TVKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKYHEGQIQCLDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGLHESLKVFSWEPIRCHDGV+VGWS+LSDLN+HEGKLLGCSYNQ+CVGVWVVDI+R
Sbjct: 241 TVLCGLHESLKVFSWEPIRCHDGVDVGWSKLSDLNIHEGKLLGCSYNQSCVGVWVVDISR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSS--NLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRL 360
            EPYA+ N NR+NG SEPKSSS  NLS+ NEN AK + G  SVSQ  DPL+KETK+LGRL
Sbjct: 301 IEPYAVGNANRVNGHSEPKSSSGGNLSVLNENTAKPSMGRFSVSQNPDPLVKETKSLGRL 360

Query: 361 SVSQNADVKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTF 420
           SVSQN+D    K   + GN P  PQRV+ N  PK    +SV VP    PKR+S KA+   
Sbjct: 361 SVSQNSD--PAKESKTPGNAPGNPQRVNLNTAPKTTQPNSVTVPTVAAPKRSSTKASVAI 420

Query: 421 NNPIFNKSDVIPVIVPRTNSRHEQ-DESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVA 480
           + PIFNKSDVIPVIVPR ++R +Q  ESRK+  ++GR++         +  DSR +  + 
Sbjct: 421 SVPIFNKSDVIPVIVPRNDARLDQAAESRKEVGISGRSV--------EQAADSRNEVGIT 480

Query: 481 GRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTN 540
           GR +   +  +     +SRKE+ +AG+++       R    +SRKE  + GR +      
Sbjct: 481 GRNLEPSQLAA-----ESRKEVGIAGKSL-----EPRQPAAESRKEAGIVGRTL------ 540

Query: 541 SRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADM 600
              +  DSRKEL + GR +P  L SK T++ R+F + ++++D   IS  SE+ G KA++ 
Sbjct: 541 --EQGADSRKELGIVGRTMPFSLQSK-TNSFRKFQNFKEDMDQPAISAASETTGSKASEF 600

Query: 601 SNIADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNE-TETKESTASYKHE 649
           +++ D        G IQG+SA ++ ++E+R IGSGK+E     E  +SY+ E
Sbjct: 601 NSVLDRSIFSAVRGPIQGISAAERNMREDRCIGSGKSEPNSAAELPSSYRDE 623

[Close]
BLAST of Cp4.1LG09g04660 vs. TrEMBL
Match: A0A061E1Y6_THECC (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Theobroma cacao GN=TCM_007630 PE=3 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 1.1e-239
Identity = 440/654 (67.28%), Postives = 507/654 (77.52%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS+VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL+GHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN VK+WDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+QC+DFHPHEFLLATGSAD+TVKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKYHEGQIQCLDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGLHESLKVFSWEPIRCHDGV+VGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDI+R
Sbjct: 241 TVLCGLHESLKVFSWEPIRCHDGVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSS--NLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRL 360
            EPYA+ N NR+NG SEPKSSS  +LS+ NEN  KA+ G LSVSQ  DPL+KETK+LGRL
Sbjct: 301 IEPYAVGNGNRVNGHSEPKSSSGGSLSVLNENTTKASMGRLSVSQNPDPLMKETKSLGRL 360

Query: 361 SVSQNAD-VKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATST 420
           SVSQN+D  K+ K L+STGN P TPQRV+ N   K    +SV VP+   PKRNS +ATS 
Sbjct: 361 SVSQNSDPAKESKNLASTGNVPGTPQRVNLNIASKTTQPNSVTVPSVAAPKRNSTRATSA 420

Query: 421 FNNPIFNKSDVIPVIVPRTNSRHEQ-DESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDV 480
            N PIFNKSDVIPVIVPR ++R EQ  E+RK+  ++GR++         +  +SR++  +
Sbjct: 421 VNVPIFNKSDVIPVIVPRNDTRLEQAAEARKEVGISGRSL--------EQAAESRREVGI 480

Query: 481 AGRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRT 540
           AGR++            +SRKE  + G+T+         +  DSRKEL + GR MP +  
Sbjct: 481 AGRSL--------EPAAESRKEAGIVGKTL--------EQGTDSRKELGIVGRTMPFS-- 540

Query: 541 NSRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAAD 600
                                  L SK T + R+F + R+++D   IS++SE+ G KAA+
Sbjct: 541 -----------------------LQSKAT-SFRKFQNSREDMDRPAISVMSETTGSKAAE 600

Query: 601 MSNIADNRNSLHGI-GSIQGVSAPQKIVKEERHIGSGKNE-TETKESTASYKHE 649
             ++ D RN    + G IQ +SA ++ V+E+R IGS K E     E  +SY+ E
Sbjct: 601 FGSVPD-RNVFPAVKGPIQAMSAAERNVREDRCIGSTKTEPNSVVELPSSYQDE 603

[Close]
BLAST of Cp4.1LG09g04660 vs. TrEMBL
Match: A0A0B0P901_GOSAR (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Gossypium arboreum GN=F383_00950 PE=3 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 1.6e-225
Identity = 412/639 (64.48%), Postives = 480/639 (75.12%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS+VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL+GHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLK+WDIRKKGCIHTYKGH RGVNAIRFTPDGRWVVSGGEDN VK+WDLTAGKLLHD
Sbjct: 121 LDTNLKVWDIRKKGCIHTYKGHNRGVNAIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+Q +DFHP+EFLLATGSAD+TVKFWDLETFELIGS GPET+GVRCLTFNPDGR
Sbjct: 181 FKSHEGQIQGLDFHPNEFLLATGSADRTVKFWDLETFELIGSTGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGLHESLKVFSWEPIRCHD V+VGWSRLSDL VHEGKLLGCSYNQ+CVGVWVVDI R
Sbjct: 241 TVLCGLHESLKVFSWEPIRCHDSVDVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDILR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSS--NLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRL 360
            +P+A+ + N +N  SEPKSSS  N ++ NEN  KA+ G LSVSQ SD L+KETK+LGRL
Sbjct: 301 IDPHAVPDANCVNSHSEPKSSSGGNPTVLNENTTKASMGRLSVSQISDTLVKETKSLGRL 360

Query: 361 SVSQNAD-VKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATST 420
           S+SQN+D  K+ K L+STGN P TPQRV+ N  PK   +SSVAVP+   PKR+S++ +S 
Sbjct: 361 SISQNSDPAKESKNLASTGNVPDTPQRVNLNTAPKTTQLSSVAVPSGAAPKRSSMRTSSF 420

Query: 421 FNNPIFNKSDVIPVIVPRTNSRHEQD-ESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDV 480
            N P FNK DVIPVIVPR + R EQ  ESRK+  ++GR++         +  +SR++  +
Sbjct: 421 VNAPNFNKLDVIPVIVPRNDMRLEQAVESRKEVGISGRSL--------EQAAESRREVGI 480

Query: 481 AGRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRT 540
           AGR++            +SRKE   AGRT+ L          D +KEL + GR MP +  
Sbjct: 481 AGRSL-----EPSQPAAESRKETGPAGRTLEL--------GTDPKKELGIVGRTMPFS-- 540

Query: 541 NSRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAAD 600
                                   L   T + R+F + R+++D   IS  SE  G K   
Sbjct: 541 ------------------------LQSKTSSFRKFQNNREDMDQPAISAPSEGAGSKVDG 592

Query: 601 MSNIADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNE 636
            S++ D        G ++G+   ++  +E+  +GSGK+E
Sbjct: 601 FSSVLDKIIFPSVKGPMKGMPVAERNTREDMCVGSGKSE 592

[Close]
BLAST of Cp4.1LG09g04660 vs. TrEMBL
Match: A0A067GP11_CITSI (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Citrus sinensis GN=CISIN_1g003448mg PE=3 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 2.2e-222
Identity = 400/519 (77.07%), Postives = 432/519 (83.24%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL+GHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQ+QCIDFHPHEFLLATGSAD+TVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHD V+VGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDI+R
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSS--NLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRL 360
            EPY I +V R+NG SE KSS+  NLS+ NEN+AKA+ G LSVSQ SDPL+KETK+LGRL
Sbjct: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRL 360

Query: 361 SVSQNAD--------------------VKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSS 420
           SVSQN+D                     K+ K LSSTG+ P TPQRV+ N G K + V+S
Sbjct: 361 SVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNS 420

Query: 421 VAVPNAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTNSRHEQD-ESRKDFDVAGRAMP 480
                AVV KR S +A +  N PI NKSD++PVIVPRTN+R EQ  ESRKD DV GR MP
Sbjct: 421 ----TAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMP 480

Query: 481 LPRTNSRHEQDDSRKDFDVAGRAMPLPRTNSRHEQDDSR 497
               + + +  DSRK F  +G  +  P  +   E   S+
Sbjct: 481 F---SLQSKATDSRK-FQNSGDEVDQPAVSVLCENTGSK 511

[Close]
BLAST of Cp4.1LG09g04660 vs. TAIR10
Match: AT5G23430.1 (AT5G23430.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 681.8 bits (1758), Expect = 7.0e-196
Identity = 350/499 (70.14%), Postives = 388/499 (77.76%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+Q +DFHPHEFLLATGSAD+TVKFWDLETFELIGS GPET+GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGL ESLK+FSWEPIRCHDGV+VGWSRLSD+NVHEGKLLGCSYNQ+CVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLS--LQNENNAKA-------------------NFGGL 360
           TEP    +  + NG  E +S S     + N+NN+K                    + G L
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 SVSQTSDPLLKETKT-------------------LGRLSVSQNADV-KDPKPLSSTGNGP 420
           SVSQ SDP  KETK+                   LGRLSVSQN+DV K+ +  SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTNSR 458
            TP RVSS    KA S  S AV NA   +RN  KA     NP+   +D  PVIVPR + R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

[Close]
BLAST of Cp4.1LG09g04660 vs. TAIR10
Match: AT5G08390.1 (AT5G08390.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 675.2 bits (1741), Expect = 6.5e-194
Identity = 365/594 (61.45%), Postives = 423/594 (71.21%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SE LVAAGAASGTIKLWDLEEAK+VRTLTGHRSNC+SV+FHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRW+VSGGEDN VK+WDLTAGKLLH+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEG++Q +DFHPHEFLLATGSADKTVKFWDLETFELIGS G ET+GVRCLTFNPDG+
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           ++LCGL ESLK+FSWEPIRCHDGV+VGWS LSD+NVHEGKLLGCSYNQNCVGVWVVD++R
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQ--NENNAKA-------------------NFGGL 360
           TEP +     + N   E  S S       N+N++K                    + G L
Sbjct: 301 TEPMS-GGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKL 360

Query: 361 SVSQTSDPLLKETKTLGRLSVSQNAD--VKDPKPL------------------SSTGNGP 420
           SVSQ SDPL K+TK+ GR SVSQ++D  VK+PKPL                  SSTG+  
Sbjct: 361 SVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVS 420

Query: 421 STPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTNSR 480
            +P RV+  + PK+ S  S  VPNA   KRN  KA    N P+ NK D  PVIVPRT   
Sbjct: 421 DSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPI 480

Query: 481 HEQ-DESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVAGRAMPLPRTNSRHEQDDSRKE 540
            EQ  ESR + D+ GR MP    + + +  DSR+    + R  P   T+S  E+  S+  
Sbjct: 481 IEQASESRAELDIIGRTMPY---SLQSKAADSRR--LSSSRNEPDLPTSSLLERSQSQPI 540

Query: 541 LDVA---GRTMPLPRTNSRHEQDDSRKE--LDVAGR--AMPLTRTNSRHEQDDS 546
             +    G T P     S    + + KE    V GR  +  L R+  R+  ++S
Sbjct: 541 EPITLQDGNTYPSDEGGSWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDENS 588

[Close]
BLAST of Cp4.1LG09g04660 vs. TAIR10
Match: AT1G61210.1 (AT1G61210.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 496.9 bits (1278), Expect = 3.2e-140
Identity = 258/483 (53.42%), Postives = 331/483 (68.53%), Query Frame = 1 

Query: 4   KRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
           KR YKLQEF+AHS+ VNCL IG+K+SR+ +TGG+D+KVNLWAIGKP +++SL GHTS +D
Sbjct: 3   KRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62

Query: 64  SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
           SV+FDS+EVLV AGA+SG IKLWD+EEAK+VR  TGHRSNC +V+FHPFGEF ASGS D 
Sbjct: 63  SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDA 122

Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
           NLKIWDIRKKGCI TYKGH+RG++ IRFTPDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123 NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKF 182

Query: 184 HEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
           HEG ++ +DFHP EFLLATGSAD+TVKFWDLETFELIGS  PE +GVR + F+PDGRTL 
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242

Query: 244 CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITRTEP 303
           CGL +SLKV+SWEP+ CHDGV++GWS L DL + EGKLLGCSY QN VG+WV DI++ EP
Sbjct: 243 CGLDDSLKVYSWEPVVCHDGVDMGWSTLGDLCISEGKLLGCSYYQNSVGIWVSDISQIEP 302

Query: 304 YAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSVSQN 363
           Y I + ++       K  S L  Q+ +  K+       S + D   KE K +   S   N
Sbjct: 303 YGIGSADK--KECVEKILSALDDQSFDRIKST---PRRSSSPDYETKEIKNIYIDSTGGN 362

Query: 364 ADVKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFNNP-- 423
           + V      +      STP   +  AG   +      V ++VVP+ + +   S+ +    
Sbjct: 363 SAV------AHKSGSLSTPATSTGQAGDNKS-----LVVHSVVPRDSDIGKDSSDSGKES 422

Query: 424 -IFNKSD----VIPVIVPRTNSRHEQDESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDV 480
             F+K+     + P  V +T ++   DE++K     G          +    ++  D ++
Sbjct: 423 ITFSKTKPGMLLRPAYVRKTPTKF--DETKKQSVAVGYLKKSGLDGEKKLDTETAFDSEM 467

[Close]
BLAST of Cp4.1LG09g04660 vs. TAIR10
Match: AT1G11160.1 (AT1G11160.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 483.4 bits (1243), Expect = 3.6e-136
Identity = 277/596 (46.48%), Postives = 363/596 (60.91%), Query Frame = 1 

Query: 4   KRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
           KR YKLQEFVAHS  VNCL IG+K+SR+L+TGG+D+KVNLW+IGK  + +SL GHTS +D
Sbjct: 3   KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62

Query: 64  SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
           SV+F+S EVLV AGA+SG IKLWDLEE+K+VR  TGHRSNC +V+FHPFGEF ASGS DT
Sbjct: 63  SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122

Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
           NL++WD RKKGCI TYKGHTRG++ I F+PDGRWVVSGG DN VK+WDLTAGKLLH+FKC
Sbjct: 123 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182

Query: 184 HEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
           HEG ++ +DFHP EFLLATGSAD+TVKFWDLETFELIG+  PE +GVR + F+PDG+TL 
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242

Query: 244 CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITRTEP 303
           CGL + LKV+SWEP+ C DGV++GWS L D  ++EGK +GCSY +N VG+WV DI+  EP
Sbjct: 243 CGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEP 302

Query: 304 YAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPL--LKETKTLGRLSVS 363
           Y    V+        K  S L+ Q+E       G +S    +  +  +    T G L+V+
Sbjct: 303 YGA--VSEDKNECMVKRFSVLNDQSERMGSGPRGSVSPDYETREIKNIYVDSTGGNLNVA 362

Query: 364 QN-ADVKDPKPLSSTGNGPSTPQRVSS----NAGPKANSVS--SVAVPNAVVPKRNSVKA 423
           QN   +K   PL S        ++ ++     AG K +S S  S +   +   +R S+  
Sbjct: 363 QNPGSLKATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGEESSYSERESIPF 422

Query: 424 TSTFNNPIFNKSDVIPVIVPRTNSRHE---QDESRKDFDVAGRAMPLPRTNSRHEQDDSR 483
           + T +  +   + V   +     S+     Q  +RK   +A    P  +     EQ+ S 
Sbjct: 423 SRTKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNAS- 482

Query: 484 KDFDVAGRAMPLPRTNSRHEQDDSRKELDVAGRTM---PLPRTNSRHEQDDSRKELDVAG 543
           K FD A  ++    TN   +   S    D A R     P    +S  + +D+R+ +    
Sbjct: 483 KPFD-AEDSIIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAMS--- 542

Query: 544 RAMPLT-----RTNSRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVD 580
            A P T       NS   +D   K   V  R  P          N  +PSG  E++
Sbjct: 543 -ADPATFGKGGMENSGDVEDIPSKTERVLSREKPG-----DEQKNTEYPSGSRELN 585

[Close]
BLAST of Cp4.1LG09g04660 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-30
Identity = 80/255 (31.37%), Postives = 119/255 (46.67%), Query Frame = 1 

Query: 54  SLTGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE-----AKIVRTLTGHRSNCISVD 113
           +LT H   + SV F S   L+A+ +A  TI+ + +       A+ V+  TGH +    V 
Sbjct: 19  TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78

Query: 114 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 173
           F     F  S S D  LK+WD+     I T  GHT     + F P    +VSG  D TV+
Sbjct: 79  FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138

Query: 174 LWDLTAGKLLHDFKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFE----LIGSAG 233
           +WD+T GK L     H   V  +DF+    L+ + S D   + WD  T      LI    
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198

Query: 234 PETSGVRCLTFNPDGRTLLCG-LHESLKVF---SWEPIRCHDG-VEVGWSRLSDLNVHEG 293
           P  S VR   F+P+G+ +L G L  +L+++   S + ++ + G V   +   S  +V  G
Sbjct: 199 PPVSFVR---FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNG 258

Query: 294 KLLGCSYNQNCVGVW 295
           K +      NCV +W
Sbjct: 259 KRIVSGSEDNCVHMW 270

[Close]
BLAST of Cp4.1LG09g04660 vs. NCBI nr
Match: gi|659090249|ref|XP_008445914.1| (PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 586/719 (81.50%), Postives = 616/719 (85.67%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSV 360
           TEPYA+NN NRLNGRSEPKSSS+L  QNENN K  F GLSVSQTSDPLLKETKTLGRLSV
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSHL--QNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSV 360

Query: 361 SQNADV-KDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFN 420
           SQN+DV KDPK LSSTGNGPSTPQ+++ NAG K N V+S AVP+AVVPKRNSVKATSTFN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTNSRHEQDESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVAGR 480
           NPIFNKSDVIPVIVPRT+SRHEQD+SRK+FDVAGRA P+ RTNSRHEQDDSRK+FDVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGR 480

Query: 481 AMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSR 540
           A+ + RTNSRHEQDDSRKE DVAGR MPL                         +RTNSR
Sbjct: 481 AVTVSRTNSRHEQDDSRKEFDVAGRVMPL-------------------------SRTNSR 540

Query: 541 HEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSN 600
           HEQDDSRKE DV GR VPAP LSKTTD NRRFP+ RDEVDNSTIS+LSESRGLKA DMS 
Sbjct: 541 HEQDDSRKECDVTGRTVPAPSLSKTTD-NRRFPNSRDEVDNSTISVLSESRGLKANDMSA 600

Query: 601 IADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEVATSLMSLLSD 660
           IADNRNSLHGIGS QGVSAPQKIVKEER+IGSGK ETETK++TA+YKHE  +    +  D
Sbjct: 601 IADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANYKHEDESRGHKISRD 660

Query: 661 DSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVA-GRTMPL---PRTNSRHEQDDSRKE 715
            S  +    GR         R   + SR   + + GR   L   P  N R  +    KE
Sbjct: 661 SSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRGYRRSPEKE 691

[Close]
BLAST of Cp4.1LG09g04660 vs. NCBI nr
Match: gi|778704295|ref|XP_011655511.1| (PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog [Cucumis sativus])

HSP 1 Score: 1082.0 bits (2797), Expect = 0.0e+00
Identity = 567/719 (78.86%), Postives = 595/719 (82.75%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSV 360
           TEPYA+NN NRLNGR EPKSSS+L  QNENN K +FGGLSVSQTSD LLKETKTLGRLSV
Sbjct: 301 TEPYAVNNANRLNGRPEPKSSSHL--QNENNTKTSFGGLSVSQTSDALLKETKTLGRLSV 360

Query: 361 SQNADV-KDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFN 420
           SQN+DV KDPK LSSTGNGPSTPQ+++ NAG K N VSS AVP+AVVPKRNSVKATSTFN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTNSRHEQDESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVAGR 480
           NPIFNKSDVIPVIVPRT+SRH                         EQDDSRK+FDVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRH-------------------------EQDDSRKEFDVAGR 480

Query: 481 AMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSR 540
           A                         +P+ RTNSR EQDDSRKE DVA R MPL+R+NSR
Sbjct: 481 A-------------------------VPVSRTNSRQEQDDSRKEFDVAARVMPLSRSNSR 540

Query: 541 HEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSN 600
           HEQDDSRKE DVAGRA PAPLLSKTTD NRRFP+ RDEVDN TIS+LSESRGLKA DMS 
Sbjct: 541 HEQDDSRKECDVAGRAAPAPLLSKTTD-NRRFPNSRDEVDNPTISVLSESRGLKANDMST 600

Query: 601 IADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEVATSLMSLLSD 660
           IADNRNSLHGIGSIQGVSAPQKIVKEER+IGSGKNETETK++TA+YKHE  +    +  D
Sbjct: 601 IADNRNSLHGIGSIQGVSAPQKIVKEERYIGSGKNETETKDTTANYKHEDESRGHKISRD 660

Query: 661 DSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVA-GRTMPL---PRTNSRHEQDDSRKE 715
            S  +    GR         R   + SR   + + GR   L   P  N R  +    KE
Sbjct: 661 ASFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRGYRPSPEKE 666

[Close]
BLAST of Cp4.1LG09g04660 vs. NCBI nr
Match: gi|659090251|ref|XP_008445915.1| (PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00
Identity = 566/719 (78.72%), Postives = 593/719 (82.48%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSV 360
           TEPYA+NN NRLNGRSEPKSSS+L  QNENN K  F GLSVSQTSDPLLKETKTLGRLSV
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSHL--QNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSV 360

Query: 361 SQNADV-KDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFN 420
           SQN+DV KDPK LSSTGNGPSTPQ+++ NAG K N V+S AVP+AVVPKRNSVKATSTFN
Sbjct: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTNSRHEQDESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVAGR 480
           NPIFNKSDVIPVIVPRT+SRH                         EQDDSRK+FDVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTSSRH-------------------------EQDDSRKEFDVAGR 480

Query: 481 AMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTNSR 540
           A                         + + RTNSRHEQDDSRKE DVAGR MPL+RTNSR
Sbjct: 481 A-------------------------VTVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSR 540

Query: 541 HEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADMSN 600
           HEQDDSRKE DV GR VPAP LSKTTD NRRFP+ RDEVDNSTIS+LSESRGLKA DMS 
Sbjct: 541 HEQDDSRKECDVTGRTVPAPSLSKTTD-NRRFPNSRDEVDNSTISVLSESRGLKANDMSA 600

Query: 601 IADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNETETKESTASYKHEVATSLMSLLSD 660
           IADNRNSLHGIGS QGVSAPQKIVKEER+IGSGK ETETK++TA+YKHE  +    +  D
Sbjct: 601 IADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANYKHEDESRGHKISRD 660

Query: 661 DSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVA-GRTMPL---PRTNSRHEQDDSRKE 715
            S  +    GR         R   + SR   + + GR   L   P  N R  +    KE
Sbjct: 661 SSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRGYRRSPEKE 666

[Close]
BLAST of Cp4.1LG09g04660 vs. NCBI nr
Match: gi|728836786|gb|KHG16229.1| (hypothetical protein F383_04189 [Gossypium arboreum])

HSP 1 Score: 838.6 bits (2165), Expect = 1.3e-239
Identity = 433/652 (66.41%), Postives = 508/652 (77.91%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS+VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL+GHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN IRFTPDGRWVVSGGEDN VK+WDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNTIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+QC+DFHPHEFLLATGSAD+TVKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKYHEGQIQCLDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGLHESLKVFSWEPIRCHDGV+VGWS+LSDLN+HEGKLLGCSYNQ+CVGVWVVDI+R
Sbjct: 241 TVLCGLHESLKVFSWEPIRCHDGVDVGWSKLSDLNIHEGKLLGCSYNQSCVGVWVVDISR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSS--NLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRL 360
            EPYA+ N NR+NG SEPKSSS  NLS+ NEN AK + G  SVSQ  DPL+KETK+LGRL
Sbjct: 301 IEPYAVGNANRVNGHSEPKSSSGGNLSVLNENTAKPSMGRFSVSQNPDPLVKETKSLGRL 360

Query: 361 SVSQNADVKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTF 420
           SVSQN+D    K   + GN P  PQRV+ N  PK    +SV VP    PKR+S KA+   
Sbjct: 361 SVSQNSD--PAKESKTPGNAPGNPQRVNLNTAPKTTQPNSVTVPTVAAPKRSSTKASVAI 420

Query: 421 NNPIFNKSDVIPVIVPRTNSRHEQ-DESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDVA 480
           + PIFNKSDVIPVIVPR ++R +Q  ESRK+  ++GR++         +  DSR +  + 
Sbjct: 421 SVPIFNKSDVIPVIVPRNDARLDQAAESRKEVGISGRSV--------EQAADSRNEVGIT 480

Query: 481 GRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRTN 540
           GR +   +  +     +SRKE+ +AG+++       R    +SRKE  + GR +      
Sbjct: 481 GRNLEPSQLAA-----ESRKEVGIAGKSL-----EPRQPAAESRKEAGIVGRTL------ 540

Query: 541 SRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAADM 600
              +  DSRKEL + GR +P  L SK T++ R+F + ++++D   IS  SE+ G KA++ 
Sbjct: 541 --EQGADSRKELGIVGRTMPFSLQSK-TNSFRKFQNFKEDMDQPAISAASETTGSKASEF 600

Query: 601 SNIADNRNSLHGIGSIQGVSAPQKIVKEERHIGSGKNE-TETKESTASYKHE 649
           +++ D        G IQG+SA ++ ++E+R IGSGK+E     E  +SY+ E
Sbjct: 601 NSVLDRSIFSAVRGPIQGISAAERNMREDRCIGSGKSEPNSAAELPSSYRDE 623

[Close]
BLAST of Cp4.1LG09g04660 vs. NCBI nr
Match: gi|590689157|ref|XP_007043149.1| (Transducin/WD40 repeat-like superfamily protein [Theobroma cacao])

HSP 1 Score: 838.2 bits (2164), Expect = 1.6e-239
Identity = 440/654 (67.28%), Postives = 507/654 (77.52%), Query Frame = 1 

Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSS+VNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL+GHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN VK+WDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+QC+DFHPHEFLLATGSAD+TVKFWDLETFELIGSAGPET+GVRCLTFNPDGR
Sbjct: 181 FKYHEGQIQCLDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300
           T+LCGLHESLKVFSWEPIRCHDGV+VGWSRLSDLNVHEGKLLGCSYNQ+CVGVWVVDI+R
Sbjct: 241 TVLCGLHESLKVFSWEPIRCHDGVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300

Query: 301 TEPYAINNVNRLNGRSEPKSSS--NLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRL 360
            EPYA+ N NR+NG SEPKSSS  +LS+ NEN  KA+ G LSVSQ  DPL+KETK+LGRL
Sbjct: 301 IEPYAVGNGNRVNGHSEPKSSSGGSLSVLNENTTKASMGRLSVSQNPDPLMKETKSLGRL 360

Query: 361 SVSQNAD-VKDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATST 420
           SVSQN+D  K+ K L+STGN P TPQRV+ N   K    +SV VP+   PKRNS +ATS 
Sbjct: 361 SVSQNSDPAKESKNLASTGNVPGTPQRVNLNIASKTTQPNSVTVPSVAAPKRNSTRATSA 420

Query: 421 FNNPIFNKSDVIPVIVPRTNSRHEQ-DESRKDFDVAGRAMPLPRTNSRHEQDDSRKDFDV 480
            N PIFNKSDVIPVIVPR ++R EQ  E+RK+  ++GR++         +  +SR++  +
Sbjct: 421 VNVPIFNKSDVIPVIVPRNDTRLEQAAEARKEVGISGRSL--------EQAAESRREVGI 480

Query: 481 AGRAMPLPRTNSRHEQDDSRKELDVAGRTMPLPRTNSRHEQDDSRKELDVAGRAMPLTRT 540
           AGR++            +SRKE  + G+T+         +  DSRKEL + GR MP +  
Sbjct: 481 AGRSL--------EPAAESRKEAGIVGKTL--------EQGTDSRKELGIVGRTMPFS-- 540

Query: 541 NSRHEQDDSRKELDVAGRAVPAPLLSKTTDTNRRFPSGRDEVDNSTISILSESRGLKAAD 600
                                  L SK T + R+F + R+++D   IS++SE+ G KAA+
Sbjct: 541 -----------------------LQSKAT-SFRKFQNSREDMDRPAISVMSETTGSKAAE 600

Query: 601 MSNIADNRNSLHGI-GSIQGVSAPQKIVKEERHIGSGKNE-TETKESTASYKHE 649
             ++ D RN    + G IQ +SA ++ V+E+R IGS K E     E  +SY+ E
Sbjct: 601 FGSVPD-RNVFPAVKGPIQAMSAAERNVREDRCIGSTKTEPNSVVELPSSYQDE 603

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g04660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KTNB1_ARATH1.2e-19470.14Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN... [more]
KTNB1_STRPU2.9e-11152.67Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus G... [more]
KTNB1_XENTR1.1e-10252.33Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE... [more]
KTNB1_HUMAN5.5e-10253.00Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=... [more]
KTNB1_MOUSE5.5e-10253.00Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=... [more]
BLAST of Cp4.1LG09g04660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPN4_CUCSA0.0e+0078.86Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis sativus GN=Csa_... [more]
A0A0B0NWJ1_GOSAR8.8e-24066.41Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Gossypium arboreum GN=F... [more]
A0A061E1Y6_THECC1.1e-23967.28Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Theobroma cacao GN=TCM_... [more]
A0A0B0P901_GOSAR1.6e-22564.48Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Gossypium arboreum GN=F... [more]
A0A067GP11_CITSI2.2e-22277.07Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Citrus sinensis GN=CISI... [more]
BLAST of Cp4.1LG09g04660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23430.17.0e-19670.14 Transducin/WD40 repeat-like superfamily protein[more]
AT5G08390.16.5e-19461.45 Transducin/WD40 repeat-like superfamily protein[more]
AT1G61210.13.2e-14053.42 Transducin/WD40 repeat-like superfamily protein[more]
AT1G11160.13.6e-13646.48 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.12.7e-3031.37 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Cp4.1LG09g04660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090249|ref|XP_008445914.1|0.0e+0081.50PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Cuc... [more]
gi|778704295|ref|XP_011655511.1|0.0e+0078.86PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog [Cucumis sativu... [more]
gi|659090251|ref|XP_008445915.1|0.0e+0078.72PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Cuc... [more]
gi|728836786|gb|KHG16229.1|1.3e-23966.41hypothetical protein F383_04189 [Gossypium arboreum][more]
gi|590689157|ref|XP_007043149.1|1.6e-23967.28Transducin/WD40 repeat-like superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051013microtubule severing
Vocabulary: Cellular Component
TermDefinition
GO:0008352katanin complex
Vocabulary: Molecular Function
TermDefinition
GO:0008017microtubule binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR028021Katanin_C-terminal
IPR026962Katanin_bsu1
IPR020472G-protein_beta_WD-40_rep
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051013 microtubule severing
cellular_component GO:0008352 katanin complex
cellular_component GO:0015630 microtubule cytoskeleton
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005874 microtubule
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g04660.1Cp4.1LG09g04660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 93..129
score: 1.6E-7coord: 9..44
score: 0.065coord: 135..171
score: 1.8E-11coord: 52..87
score: 1.3E-4coord: 175..213
score: 2.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 48..87
score: 2.1E-5coord: 90..129
score: 1.6E-9coord: 132..171
score: 3.7E-13coord: 5..45
score: 0.0021coord: 216..254
score: 1.2coord: 174..213
score: 9.7
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 181..222
score: 15.454coord: 55..96
score: 15.354coord: 12..54
score: 10.074coord: 139..180
score: 18.562coord: 97..138
score: 14
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 9..298
score: 8.2
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 12..245
score: 58
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 7..295
score: 3.97
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 158..172
score: -coord: 200..214
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 200..214
score: 1.0E-7coord: 158..172
score: 1.0E-7coord: 116..130
score: 1.
IPR026962Katanin p80 subunit B1HAMAPMF_03022Katanin_p80_B1coord: 3..1086
score: 21
IPR026962Katanin p80 subunit B1PANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 874..1085
score: 0.0coord: 1..704
score:
IPR028021Katanin p80 subunit, C-terminalPFAMPF13925Katanin_con80coord: 925..1083
score: 7.3
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 1..704
score: 0.0coord: 874..1085
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g04660Cucsa.281110Cucumber (Gy14) v1cgycpeB0731
Cp4.1LG09g04660CmaCh18G008400Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g04660CmaCh04G012780Cucurbita maxima (Rimu)cmacpeB697
Cp4.1LG09g04660CmoCh04G013480Cucurbita moschata (Rifu)cmocpeB648
Cp4.1LG09g04660CmoCh18G008440Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g04660Cla022887Watermelon (97103) v1cpewmB055
Cp4.1LG09g04660Csa5G580650Cucumber (Chinese Long) v2cpecuB042
Cp4.1LG09g04660MELO3C011774Melon (DHL92) v3.5.1cpemeB025
Cp4.1LG09g04660ClCG11G012830Watermelon (Charleston Gray)cpewcgB018
Cp4.1LG09g04660CSPI05G20470Wild cucumber (PI 183967)cpecpiB037
Cp4.1LG09g04660Lsi04G007640Bottle gourd (USVL1VR-Ls)cpelsiB033
Cp4.1LG09g04660MELO3C011774.2Melon (DHL92) v3.6.1cpemedB029
Cp4.1LG09g04660CsaV3_5G029230Cucumber (Chinese Long) v3cpecucB0044
Cp4.1LG09g04660Bhi07G000942Wax gourdcpewgoB0056
Cp4.1LG09g04660CsGy5G019990Cucumber (Gy14) v2cgybcpeB582
Cp4.1LG09g04660Carg02038Silver-seed gourdcarcpeB1172
Cp4.1LG09g04660Carg14426Silver-seed gourdcarcpeB1017
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g04660Cp4.1LG01g10040Cucurbita pepo (Zucchini)cpecpeB036
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g04660Cucurbita maxima (Rimu)cmacpeB700
Cp4.1LG09g04660Cucurbita moschata (Rifu)cmocpeB651
Cp4.1LG09g04660Bottle gourd (USVL1VR-Ls)cpelsiB031
Cp4.1LG09g04660Silver-seed gourdcarcpeB1169