Cp4.1LG09g04540 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g04540
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	NADPH:quinone oxidoreductase
Location	Cp4.1LG09 : 2903849 .. 2905920 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATCGCTCACAAATCTGTATTTAAACTTCCATCGTTGATTGGCGAATTCGGAGTTGAGCGCTGAAACACTTTTACAGAGCGTCTTCGTTTCGAGATCTATGGCGGCGACGGCTACGAAACCGGTGGTTAAAGTGGCGGCTCTGTGCGGCTCTATTCGCAAGGCCTCCTACAATCGCGGCCTAGTTCGCGCCGGTACTCTTGTGTCGATTTCTTATGCGTTGATTTCTTGTTTCTTTGTATTGTCGATTGTTGAAATTTGGTGAGGGATTTTCATTTTTGTTGCGATTTCTGTTGATTAGCGATCGCGATTTGCGAGGAATCGCTTGAAGGCGTTGAAATTGAGTATCTGGAAGTGGAGCCTCTGCCGATGCTCAATACGGATCTGGAAACGCCGCCGGATGGTTTTCCGGCCGTCGTTGAAGATTTCCGGCGGCAGATTCGTGAGGCCGATTGCATTCTCTTTGCTTCTCCGGAATATAATTACTCCATTGCTGGTCTCGTTTCTTCTCCCTCAAGAAATCTGTTAATGGCACGATGAATTTTTATTTTTATTTTTTAATCTATATTTTTTATAATTAAAAAATTATTTTATTTTTAACAAAATTAGGATTAGATGTAACCAAACCAGGGCGTTTTTTAACCCACTGAGCCCGAGCCCTGACCAGTGTGTGTTAGACGAACACGACTCTCTCATCGAACAAAGTGTGCCTCCCCTAAAAGGCATCATACCAATGGAGAGAGTATTCTTTGATTATAAACCTATGATCATTTCCGGGGATGTGGGACTTTCATCATCTAACACCTCCCATCAACAAAGTGTGTCTCTCCTTAATCGAGGCTCGACTCAAAAACTCATTTGGAGTCTTAGTCATTTTTTATTGTCTTTGAGGAGGCTTGACTCCTTTTTCTTTTGGAGTCCTTTGTTCGATGTTTGAAAATTTACCAATCTATTGGCACAACTAAGTTTAGGACATGACTCTGATACCATGTTAGACGAACAAGACTCTCCACAATTGTATGATATTCCCCACTTTGAGAATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCCAAAAGGCCTCATACCAATGGAGAGAGTATTCTTTGTTTATAAACCCATGATCATTCCCTAAATTAGCCGACATGAGACTTTCATCATCCAACAGTGTGGACCTGAGATTTTTGATAGGTGGTGGGGATGGATACAAAGAAGGCCTCCCGATCCCCGCCTTGACCCGTGAATATAAGTACGGGGAGAGATTTTTTTCAATTAACTAAAATAGGGTTGAGATAAGGATTATATTCTCGGTCCTCGATCTTACTCTACGCTGCCTCATTTGAAAACGCCATATTTTTTTTAAACATTAATAAATATTTAATATTATTGACGACGTATTTATTTTCGATATTTGAAAATATTTTATAAGAATAATTGAATTCCACCTAAATTATTTTTTAAATATAATGATACCTTTAATTCCGATAATAAAAAAATATAAATAATGCGCACTTAAAAATGTCAAAAGTTTTTTAAATTATTTTTTAATCCAAATTATTAAAATATATATTTTTTTAAAAAAAAGTGATTAAATTTAAAAATAATCGTTGCCAATCTAATCATTGTTGCAGCTCCATTGAAGAATGCAATTGATTGGGCGTCAAGGCCACCAAACGCATTCGCCGGAAAGGCGGCGGCCATCGTGAGTGCCGGCGGAGGGTTCGGCGGAGCACTGGCACAGTTCCATCTCCGGCAAGTGGGAGTCTTCTTAGACCTTCACTTTGTCAACAAGCCAGAGCTCCATGTGAATGCCTTTCAGCCACCTCTCAAGTTTGATGACAATAATGGCGACTTGATTCATCAAGAAACCAAGGATAGGTTGAAGCAAGTTCTTCTCTCCTTGGCGAACCTTTCTCTACGCCTCTGATCAAATTAAAACAATACCCGACCACTACTTTGATCTTTCGTGTCTTTGCTTACGTGTTTGTTTTTGTTATCTCGAACCCCATCTAAATAACATCGATCGTCCTGTTTTTCGTTGGTATTTATCTTTCATACAACTTAACATGGCT

mRNA sequence

TGTATCGCTCACAAATCTGTATTTAAACTTCCATCGTTGATTGGCGAATTCGGAGTTGAGCGCTGAAACACTTTTACAGAGCGTCTTCGTTTCGAGATCTATGGCGGCGACGGCTACGAAACCGGTGGTTAAAGTGGCGGCTCTGTGCGGCTCTATTCGCAAGGCCTCCTACAATCGCGGCCTAGTTCGCGCCGCGATCGCGATTTGCGAGGAATCGCTTGAAGGCGTTGAAATTGAGTATCTGGAAGTGGAGCCTCTGCCGATGCTCAATACGGATCTGGAAACGCCGCCGGATGGTTTTCCGGCCGTCGTTGAAGATTTCCGGCGGCAGATTCGTGAGGCCGATTGCATTCTCTTTGCTTCTCCGGAATATAATTACTCCATTGCTGCTCCATTGAAGAATGCAATTGATTGGGCGTCAAGGCCACCAAACGCATTCGCCGGAAAGGCGGCGGCCATCGTGAGTGCCGGCGGAGGGTTCGGCGGAGCACTGGCACAGTTCCATCTCCGGCAAGTGGGAGTCTTCTTAGACCTTCACTTTGTCAACAAGCCAGAGCTCCATGTGAATGCCTTTCAGCCACCTCTCAAGTTTGATGACAATAATGGCGACTTGATTCATCAAGAAACCAAGGATAGGTTGAAGCAAGTTCTTCTCTCCTTGGCGAACCTTTCTCTACGCCTCTGATCAAATTAAAACAATACCCGACCACTACTTTGATCTTTCGTGTCTTTGCTTACGTGTTTGTTTTTGTTATCTCGAACCCCATCTAAATAACATCGATCGTCCTGTTTTTCGTTGGTATTTATCTTTCATACAACTTAACATGGCT

Coding sequence (CDS)

ATGGCGGCGACGGCTACGAAACCGGTGGTTAAAGTGGCGGCTCTGTGCGGCTCTATTCGCAAGGCCTCCTACAATCGCGGCCTAGTTCGCGCCGCGATCGCGATTTGCGAGGAATCGCTTGAAGGCGTTGAAATTGAGTATCTGGAAGTGGAGCCTCTGCCGATGCTCAATACGGATCTGGAAACGCCGCCGGATGGTTTTCCGGCCGTCGTTGAAGATTTCCGGCGGCAGATTCGTGAGGCCGATTGCATTCTCTTTGCTTCTCCGGAATATAATTACTCCATTGCTGCTCCATTGAAGAATGCAATTGATTGGGCGTCAAGGCCACCAAACGCATTCGCCGGAAAGGCGGCGGCCATCGTGAGTGCCGGCGGAGGGTTCGGCGGAGCACTGGCACAGTTCCATCTCCGGCAAGTGGGAGTCTTCTTAGACCTTCACTTTGTCAACAAGCCAGAGCTCCATGTGAATGCCTTTCAGCCACCTCTCAAGTTTGATGACAATAATGGCGACTTGATTCATCAAGAAACCAAGGATAGGTTGAAGCAAGTTCTTCTCTCCTTGGCGAACCTTTCTCTACGCCTCTGA

Protein sequence

MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLETPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAIVSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRLKQVLLSLANLSLRL

Homology

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BLAST of Cp4.1LG09g04540 vs. Swiss-Prot
Match: NQR_SOLTU (NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.5e-66
Identity = 126/190 (66.32%), Postives = 155/190 (81.58%), Query Frame = 1


Query: 5   ATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLETPP 64
           A +PV+KVA LCGS+RK SYNRGL+ AA+ IC++S+ G+EIEY+++ PLP LNTDLE   
Sbjct: 2   AAQPVIKVAGLCGSLRKGSYNRGLLNAAMEICKDSITGMEIEYVDISPLPFLNTDLEVNG 61

Query: 65  DGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAIVSAG 124
             +P VVE FR++I EADC LFASPEYNYSI  PLKNAIDWASRPPN +A KAAA+VSAG
Sbjct: 62  T-YPPVVEAFRKKIEEADCFLFASPEYNYSITGPLKNAIDWASRPPNVWADKAAAMVSAG 121

Query: 125 GGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRLKQVL 184
           GGFGG  +Q+HLRQ+GVFLDLHF+NKPE  +NAFQ P KF D++G L  +ETK RL+ VL
Sbjct: 122 GGFGGGRSQYHLRQIGVFLDLHFINKPEFFLNAFQQPPKF-DSDGVLTDEETKQRLRAVL 181

Query: 185 LSLANLSLRL 195
           L+L  L+L+L
Sbjct: 182 LALQALALKL 189

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BLAST of Cp4.1LG09g04540 vs. Swiss-Prot
Match: NQR1_ORYSJ (Probable NADPH:quinone oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os01g0953600 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.4e-66
Identity = 123/194 (63.40%), Postives = 156/194 (80.41%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           M A A +PV++VAA+CGS+RKASYN GL+RAA  +CEES+ G+ ++++++  LP+LNTDL
Sbjct: 1   MEAAAARPVIRVAAICGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDL 60

Query: 61  ETPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 120
           ET   GFP  VE FR ++R+ADC LF SPEYNYSIA PLKNA+DWASR  N +A K AAI
Sbjct: 61  ETADGGFPPAVEAFRDKVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAI 120

Query: 121 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 180
           VSAGGGFGG  +Q+HLRQVGVFLDLHF+NKPEL V AF+ P KFD ++G+LI  + ++R+
Sbjct: 121 VSAGGGFGGGRSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFD-SDGNLIDAQIRERI 180

Query: 181 KQVLLSLANLSLRL 195
           KQVLLSL   +LRL
Sbjct: 181 KQVLLSLQAFTLRL 193

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BLAST of Cp4.1LG09g04540 vs. Swiss-Prot
Match: NQR_ARATH (NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.0e-64
Identity = 122/193 (63.21%), Postives = 158/193 (81.87%), Query Frame = 1


Query: 2   AATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLE 61
           A TA KP+++VAAL GS+RK S++ GL+RAAI + +ES+ G++IEY+++ PLP++NTDLE
Sbjct: 3   AVTAIKPLIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLE 62

Query: 62  TPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAIV 121
                +P VVE FR++I EAD ILFASPEYN+S++APLKNA+DWASRPPN +A K AAI+
Sbjct: 63  VNGT-YPPVVEAFRQKILEADSILFASPEYNFSVSAPLKNALDWASRPPNVWADKPAAII 122

Query: 122 SAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRLK 181
           S GGGFGG  +Q+HLRQ+GVFLDLHF+NKPE  +NAFQPP KF D  G+L+ + TK+RLK
Sbjct: 123 STGGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKF-DAEGNLVDEVTKERLK 182

Query: 182 QVLLSLANLSLRL 195
           QVLLSL   +LRL
Sbjct: 183 QVLLSLQAFTLRL 193

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BLAST of Cp4.1LG09g04540 vs. Swiss-Prot
Match: NQR2_ORYSJ (Probable NADPH:quinone oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os01g0954000 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57
Identity = 111/194 (57.22%), Postives = 147/194 (75.77%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           M  + +   ++VAA+ GS+R+ S N GL+RAA  ICEES+ G+ I+++++  LP+LNTD+
Sbjct: 1   MEGSTSPKALRVAAISGSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDM 60

Query: 61  ETPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 120
           E   DGFP  VE FR  +R ADC LFASPEYNYSI+ PLKNA+DW SRPPN +A +AAAI
Sbjct: 61  EVD-DGFPPAVEAFRASVRAADCFLFASPEYNYSISGPLKNALDWGSRPPNCWADRAAAI 120

Query: 121 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 180
           VSA GG GG+ + +H+RQVGVFLD+HF+NKPE+ + A QPP KF D++G+LI  E K+ L
Sbjct: 121 VSASGGSGGSRSMYHIRQVGVFLDIHFINKPEVFIKAHQPPKKF-DSDGNLIDPEIKEEL 180

Query: 181 KQVLLSLANLSLRL 195
           K +LLSL   +LRL
Sbjct: 181 KDMLLSLQAFALRL 192

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BLAST of Cp4.1LG09g04540 vs. Swiss-Prot
Match: FMNRE_PSEAE (NAD(P)H-dependent FMN reductase PA1204 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1204 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-33
Identity = 83/180 (46.11%), Postives = 114/180 (63.33%), Query Frame = 1


Query: 10  VKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLETPPDGFPA 69
           +KV  + GS+R  SYN   ++ AI +      G+ IE  ++  +P+ N D+     GFP 
Sbjct: 5   IKVLGISGSLRSGSYNSAALQEAIGLVPP---GMSIELADISGIPLYNEDVYAL--GFPP 64

Query: 70  VVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPP-NAFAGKAAAIVSAGGG-F 129
            VE FR QIR AD +LFA+PEYNYS+A  LKNAIDWASRPP   F+GK AAI+ A  G F
Sbjct: 65  AVERFREQIRAADALLFATPEYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGRF 124

Query: 130 GGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRLKQVLLSL 188
           G A AQ+HLRQ  VFLD+H +NKPE+ +++ Q      D  G L+  + ++ ++Q L +L
Sbjct: 125 GTARAQYHLRQTLVFLDVHPLNKPEVMISSAQNAF---DAQGRLLDDKARELIQQQLQAL 176

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BLAST of Cp4.1LG09g04540 vs. TrEMBL
Match: A0A0A0KRT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623860 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.1e-76
Identity = 149/194 (76.80%), Postives = 167/194 (86.08%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           +  T  +PVVK  ALCGS+RKAS+NRGL+RAA+ IC+E   G+EIEYLEV+PLPMLNTDL
Sbjct: 4   VGVTGGEPVVKAVALCGSLRKASFNRGLIRAAMKICKEE-SGIEIEYLEVDPLPMLNTDL 63

Query: 61  ETPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 120
           ETP  GFP VVE FRR+I  +DCILFASPEYNYSIAAPLKNAIDWASRPPN FAGKAAAI
Sbjct: 64  ETPNGGFPPVVEAFRRKILHSDCILFASPEYNYSIAAPLKNAIDWASRPPNVFAGKAAAI 123

Query: 121 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 180
           +SAGGGFGG LAQFHLRQVGVFLDLHFVNKP +HVNAFQPP KF++ +GDLI Q+T   L
Sbjct: 124 MSAGGGFGGGLAQFHLRQVGVFLDLHFVNKPGVHVNAFQPPPKFNE-DGDLIDQQTYQNL 183

Query: 181 KQVLLSLANLSLRL 195
           K +LLSL NLSLRL
Sbjct: 184 KLLLLSLTNLSLRL 195

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BLAST of Cp4.1LG09g04540 vs. TrEMBL
Match: B9GWZ1_POPTR (NADPH:QUINONE OXIDOREDUCTASE family protein OS=Populus trichocarpa GN=POPTR_0003s19510g PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-68
Identity = 133/195 (68.21%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           M A A+KPV+KV ALCGS+RK S+NRGL+R+AI I ++S+ G+EIEY+++ PLPMLNTDL
Sbjct: 1   MEAVASKPVIKVVALCGSLRKGSFNRGLLRSAIQISKDSVNGMEIEYIDISPLPMLNTDL 60

Query: 61  ETPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAA 120
           E   DG FP VVE FR++I +AD +LFASPEYNYS+ APLKNAIDWASRPPN +A KAAA
Sbjct: 61  EV--DGNFPPVVEGFRQKILQADSVLFASPEYNYSVTAPLKNAIDWASRPPNCWADKAAA 120

Query: 121 IVSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDR 180
           IVS GG FGG LAQ+HLRQ+G++LDLHF+NKPE H+NAF PP KF D+NG+LI  ++KDR
Sbjct: 121 IVSTGGSFGGGLAQYHLRQIGIYLDLHFINKPEFHLNAFAPPAKF-DSNGNLIDPQSKDR 180

Query: 181 LKQVLLSLANLSLRL 195
           LK+VLLSL   +LRL
Sbjct: 181 LKEVLLSLLAFTLRL 192

[Close]

BLAST of Cp4.1LG09g04540 vs. TrEMBL
Match: A0A0D2TGQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G018200 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.9e-67
Identity = 131/194 (67.53%), Postives = 166/194 (85.57%), Query Frame = 1


Query: 2   AATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLE 61
           AA A+KPV+KVAA+CGS+RKAS NRGL+R A+ + +ES+ GV++EY+++ PLPML+TDLE
Sbjct: 3   AAVASKPVIKVAAICGSLRKASNNRGLIRTALELTKESIAGVQMEYIDISPLPMLDTDLE 62

Query: 62  TPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 121
              DG FP  VE FR++I E+D ILFASPEYNYS+ APLKNA+DWASRPPN +A KAAAI
Sbjct: 63  V--DGKFPPAVEAFRQKILESDSILFASPEYNYSLTAPLKNALDWASRPPNVWADKAAAI 122

Query: 122 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 181
           VSAGGGFGGA + +HLRQVGVFLDLHF+NKPE ++NAFQPP KF D++G+LI +++K+R+
Sbjct: 123 VSAGGGFGGARSHYHLRQVGVFLDLHFINKPEFYLNAFQPPAKF-DSDGNLIDEDSKERM 182

Query: 182 KQVLLSLANLSLRL 195
           KQVLLSL   +LRL
Sbjct: 183 KQVLLSLQAFTLRL 193

[Close]

BLAST of Cp4.1LG09g04540 vs. TrEMBL
Match: A0A0B0NL69_GOSAR (Quinone oxidoreductase-like protein OS=Gossypium arboreum GN=F383_17719 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-66
Identity = 130/194 (67.01%), Postives = 165/194 (85.05%), Query Frame = 1


Query: 2   AATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLE 61
           A  A+KPV+KVAA+CGS+RKASYNRGL+R A+ + +ES+ G+++EY+++ PLPML+TDLE
Sbjct: 3   AVVASKPVIKVAAICGSLRKASYNRGLIRTALELTKESIAGLQMEYIDISPLPMLDTDLE 62

Query: 62  TPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 121
              DG FP  VE FR++I EAD IL ASPEYNYS+ APLKNA+DWASRPPN +A KAAAI
Sbjct: 63  V--DGKFPPAVEAFRQKILEADSILIASPEYNYSLTAPLKNALDWASRPPNVWADKAAAI 122

Query: 122 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 181
           VSAGGGFGGA + +HLRQVGVFLDLHF+NKPE ++NAFQPP KF D++G+LI +++K+R+
Sbjct: 123 VSAGGGFGGARSHYHLRQVGVFLDLHFINKPEFYLNAFQPPAKF-DSDGNLIDEDSKERM 182

Query: 182 KQVLLSLANLSLRL 195
           KQVLLSL   +LRL
Sbjct: 183 KQVLLSLQAFTLRL 193

[Close]

BLAST of Cp4.1LG09g04540 vs. TrEMBL
Match: A0A0D2V0I7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G018200 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-66
Identity = 129/194 (66.49%), Postives = 166/194 (85.57%), Query Frame = 1


Query: 2   AATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLE 61
           AA A+KPV+KVAA+CGS+RKAS NRGL+R A+ + +ES+ G+++EY+++ PLPML+TDLE
Sbjct: 3   AAVASKPVIKVAAICGSLRKASNNRGLIRTALELTKESIAGIQMEYIDISPLPMLDTDLE 62

Query: 62  TPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 121
              DG FP  VE FR++I E+D ILFASPEYN+S+ APLKNA+DWASRPPN +A KAAAI
Sbjct: 63  V--DGKFPPAVEAFRQKILESDSILFASPEYNFSLTAPLKNALDWASRPPNVWADKAAAI 122

Query: 122 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 181
           VSAGGGFGGA + +HLRQVGVFLDLHF+NKPE ++NAFQPP KF D++G+LI +++K+R+
Sbjct: 123 VSAGGGFGGARSHYHLRQVGVFLDLHFINKPEFYLNAFQPPAKF-DSDGNLIDEDSKERM 182

Query: 182 KQVLLSLANLSLRL 195
           KQVLLSL   +LRL
Sbjct: 183 KQVLLSLQAFTLRL 193

[Close]

BLAST of Cp4.1LG09g04540 vs. TAIR10
Match: AT3G27890.1 (AT3G27890.1 NADPH:quinone oxidoreductase)

HSP 1 Score: 244.6 bits (623), Expect = 5.1e-65
Identity = 122/193 (63.21%), Postives = 158/193 (81.87%), Query Frame = 1


Query: 2   AATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDLE 61
           A TA KP+++VAAL GS+RK S++ GL+RAAI + +ES+ G++IEY+++ PLP++NTDLE
Sbjct: 3   AVTAIKPLIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLE 62

Query: 62  TPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAIV 121
                +P VVE FR++I EAD ILFASPEYN+S++APLKNA+DWASRPPN +A K AAI+
Sbjct: 63  VNGT-YPPVVEAFRQKILEADSILFASPEYNFSVSAPLKNALDWASRPPNVWADKPAAII 122

Query: 122 SAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRLK 181
           S GGGFGG  +Q+HLRQ+GVFLDLHF+NKPE  +NAFQPP KF D  G+L+ + TK+RLK
Sbjct: 123 STGGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKF-DAEGNLVDEVTKERLK 182

Query: 182 QVLLSLANLSLRL 195
           QVLLSL   +LRL
Sbjct: 183 QVLLSLQAFTLRL 193

[Close]

BLAST of Cp4.1LG09g04540 vs. NCBI nr
Match: gi|659092231|ref|XP_008446965.1| (PREDICTED: NADPH:quinone oxidoreductase-like [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 3.4e-79
Identity = 153/194 (78.87%), Postives = 171/194 (88.14%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           +  TA KPVVK  ALCGS+RKAS+NRGL+RAA+ IC+E   G+EIEYLEVEPLPMLNTDL
Sbjct: 36  VGVTANKPVVKAVALCGSLRKASFNRGLIRAAMEICKEE-SGIEIEYLEVEPLPMLNTDL 95

Query: 61  ETPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 120
           ETP  GFP VVE FR +I  +DCILFASPEYNYS+AAPLKNAIDWASRPPN FAGKAAAI
Sbjct: 96  ETPDGGFPPVVEAFRHKILHSDCILFASPEYNYSLAAPLKNAIDWASRPPNVFAGKAAAI 155

Query: 121 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 180
           +SAGGGFGG LAQFHLRQVGVFLDLHFVNKPE+HV+AFQPPLKF + +GDLIHQ+T  +L
Sbjct: 156 MSAGGGFGGGLAQFHLRQVGVFLDLHFVNKPEVHVHAFQPPLKF-NQDGDLIHQQTYHQL 215

Query: 181 KQVLLSLANLSLRL 195
           KQ+LLSL NLSLRL
Sbjct: 216 KQLLLSLTNLSLRL 227

[Close]

BLAST of Cp4.1LG09g04540 vs. NCBI nr
Match: gi|449449358|ref|XP_004142432.1| (PREDICTED: NAD(P)H:quinone oxidoreductase-like [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 1.0e-75
Identity = 149/194 (76.80%), Postives = 167/194 (86.08%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           +  T  +PVVK  ALCGS+RKAS+NRGL+RAA+ IC+E   G+EIEYLEV+PLPMLNTDL
Sbjct: 4   VGVTGGEPVVKAVALCGSLRKASFNRGLIRAAMKICKEE-SGIEIEYLEVDPLPMLNTDL 63

Query: 61  ETPPDGFPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAAI 120
           ETP  GFP VVE FRR+I  +DCILFASPEYNYSIAAPLKNAIDWASRPPN FAGKAAAI
Sbjct: 64  ETPNGGFPPVVEAFRRKILHSDCILFASPEYNYSIAAPLKNAIDWASRPPNVFAGKAAAI 123

Query: 121 VSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDRL 180
           +SAGGGFGG LAQFHLRQVGVFLDLHFVNKP +HVNAFQPP KF++ +GDLI Q+T   L
Sbjct: 124 MSAGGGFGGGLAQFHLRQVGVFLDLHFVNKPGVHVNAFQPPPKFNE-DGDLIDQQTYQNL 183

Query: 181 KQVLLSLANLSLRL 195
           K +LLSL NLSLRL
Sbjct: 184 KLLLLSLTNLSLRL 195

[Close]

BLAST of Cp4.1LG09g04540 vs. NCBI nr
Match: gi|224075870|ref|XP_002304805.1| (NADPH:QUINONE OXIDOREDUCTASE family protein [Populus trichocarpa])

HSP 1 Score: 266.9 bits (681), Expect = 2.7e-68
Identity = 133/195 (68.21%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           M A A+KPV+KV ALCGS+RK S+NRGL+R+AI I ++S+ G+EIEY+++ PLPMLNTDL
Sbjct: 1   MEAVASKPVIKVVALCGSLRKGSFNRGLLRSAIQISKDSVNGMEIEYIDISPLPMLNTDL 60

Query: 61  ETPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAA 120
           E   DG FP VVE FR++I +AD +LFASPEYNYS+ APLKNAIDWASRPPN +A KAAA
Sbjct: 61  EV--DGNFPPVVEGFRQKILQADSVLFASPEYNYSVTAPLKNAIDWASRPPNCWADKAAA 120

Query: 121 IVSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDR 180
           IVS GG FGG LAQ+HLRQ+G++LDLHF+NKPE H+NAF PP KF D+NG+LI  ++KDR
Sbjct: 121 IVSTGGSFGGGLAQYHLRQIGIYLDLHFINKPEFHLNAFAPPAKF-DSNGNLIDPQSKDR 180

Query: 181 LKQVLLSLANLSLRL 195
           LK+VLLSL   +LRL
Sbjct: 181 LKEVLLSLLAFTLRL 192

[Close]

BLAST of Cp4.1LG09g04540 vs. NCBI nr
Match: gi|743943953|ref|XP_011016490.1| (PREDICTED: NADPH:quinone oxidoreductase-like [Populus euphratica])

HSP 1 Score: 265.8 bits (678), Expect = 6.0e-68
Identity = 132/195 (67.69%), Postives = 165/195 (84.62%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           M A A+KPV+KV A+CGS+RK S+NRGL+R+AI I ++S++G+EIEY+++ PLPMLNTDL
Sbjct: 1   MEAVASKPVIKVVAVCGSLRKGSFNRGLLRSAIQISKDSVKGMEIEYIDISPLPMLNTDL 60

Query: 61  ETPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAA 120
           E   DG FP VVE FR++I +AD +LFASPEYNYS+ APLKNAIDWASRPPN +A KAAA
Sbjct: 61  EV--DGNFPPVVEAFRQKILQADSVLFASPEYNYSVTAPLKNAIDWASRPPNCWADKAAA 120

Query: 121 IVSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDR 180
           IVS GG FGG LAQ+HLRQ+G++LDLHF+NKPE H+NAF PP KF D+NG+LI  ++KDR
Sbjct: 121 IVSTGGSFGGGLAQYHLRQIGIYLDLHFINKPEFHLNAFAPPAKF-DSNGNLIDPQSKDR 180

Query: 181 LKQVLLSLANLSLRL 195
           LK+VLLSL   +LRL
Sbjct: 181 LKEVLLSLLAFTLRL 192

[Close]

BLAST of Cp4.1LG09g04540 vs. NCBI nr
Match: gi|743939358|ref|XP_011014128.1| (PREDICTED: NADPH:quinone oxidoreductase-like [Populus euphratica])

HSP 1 Score: 265.4 bits (677), Expect = 7.9e-68
Identity = 133/195 (68.21%), Postives = 163/195 (83.59%), Query Frame = 1


Query: 1   MAATATKPVVKVAALCGSIRKASYNRGLVRAAIAICEESLEGVEIEYLEVEPLPMLNTDL 60
           M A A+KPV+KV ALCGS+RK S+NRGL+R+AI I  +S+ G+EIEY+++ PLPMLNTDL
Sbjct: 1   MEAVASKPVIKVVALCGSLRKGSFNRGLLRSAIQISMDSVNGMEIEYIDISPLPMLNTDL 60

Query: 61  ETPPDG-FPAVVEDFRRQIREADCILFASPEYNYSIAAPLKNAIDWASRPPNAFAGKAAA 120
           E   DG FP VVE FR++I +AD +LFASPEYNYS+ APLKNAIDWASRPPN +A KAAA
Sbjct: 61  EV--DGNFPPVVEAFRQKILQADSVLFASPEYNYSVTAPLKNAIDWASRPPNCWADKAAA 120

Query: 121 IVSAGGGFGGALAQFHLRQVGVFLDLHFVNKPELHVNAFQPPLKFDDNNGDLIHQETKDR 180
           IVS GG FGG LAQ+HLRQ+G++LDLHF+NKPE H+NAF PP KF D+NG+LI  ++KDR
Sbjct: 121 IVSTGGSFGGGLAQYHLRQIGIYLDLHFINKPEFHLNAFAPPAKF-DSNGNLIDPQSKDR 180

Query: 181 LKQVLLSLANLSLRL 195
           LK+VLLSL   +LRL
Sbjct: 181 LKEVLLSLLAFTLRL 192

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g04540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NQR_SOLTU	2.5e-66	66.32	NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum PE=2 SV=1	[more]
NQR1_ORYSJ	7.4e-66	63.40	Probable NADPH:quinone oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os01g...	[more]
NQR_ARATH	9.0e-64	63.21	NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1	[more]
NQR2_ORYSJ	1.6e-57	57.22	Probable NADPH:quinone oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os01g...	[more]
FMNRE_PSEAE	4.8e-33	46.11	NAD(P)H-dependent FMN reductase PA1204 OS=Pseudomonas aeruginosa (strain ATCC 15...	[more]

BLAST of Cp4.1LG09g04540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRT7_CUCSA	7.1e-76	76.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623860 PE=4 SV=1	[more]
B9GWZ1_POPTR	1.9e-68	68.21	NADPH:QUINONE OXIDOREDUCTASE family protein OS=Populus trichocarpa GN=POPTR_0003...	[more]
A0A0D2TGQ7_GOSRA	7.9e-67	67.53	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G018200 PE=4 SV=1	[more]
A0A0B0NL69_GOSAR	1.0e-66	67.01	Quinone oxidoreductase-like protein OS=Gossypium arboreum GN=F383_17719 PE=4 SV=...	[more]
A0A0D2V0I7_GOSRA	3.0e-66	66.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G018200 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g04540 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27890.1	5.1e-65	63.21	NADPH:quinone oxidoreductase	[more]

BLAST of Cp4.1LG09g04540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092231\|ref\|XP_008446965.1\|	3.4e-79	78.87	PREDICTED: NADPH:quinone oxidoreductase-like [Cucumis melo]	[more]
gi\|449449358\|ref\|XP_004142432.1\|	1.0e-75	76.80	PREDICTED: NAD(P)H:quinone oxidoreductase-like [Cucumis sativus]	[more]
gi\|224075870\|ref\|XP_002304805.1\|	2.7e-68	68.21	NADPH:QUINONE OXIDOREDUCTASE family protein [Populus trichocarpa]	[more]
gi\|743943953\|ref\|XP_011016490.1\|	6.0e-68	67.69	PREDICTED: NADPH:quinone oxidoreductase-like [Populus euphratica]	[more]
gi\|743939358\|ref\|XP_011014128.1\|	7.9e-68	68.21	PREDICTED: NADPH:quinone oxidoreductase-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR005025	FMN_Rdtase-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0006833	water transport
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0010167	response to nitrate
biological_process	GO:0010200	response to chitin
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0043900	regulation of multi-organism process
biological_process	GO:0015706	nitrate transport
biological_process	GO:0006096	glycolytic process
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0016045	detection of bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0000165	MAPK cascade
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003955	NAD(P)H dehydrogenase (quinone) activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0052873	FMN reductase (NADPH) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g04540.1	Cp4.1LG09g04540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005025	NADPH-dependent FMN reductase-like	PFAM	PF03358	FMN_red	coord: 11..157 score: 1.6
None	No IPR available	PANTHER	PTHR30543	CHROMATE REDUCTASE	coord: 6..194 score: 6.3E
None	No IPR available	PANTHER	PTHR30543:SF2	NADPH:QUINONE OXIDOREDUCTASE	coord: 6..194 score: 6.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g04540	Cucsa.307900	Cucumber (Gy14) v1	cgycpeB0804
Cp4.1LG09g04540	CmaCh18G008560	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g04540	CmoCh18G008620	Cucurbita moschata (Rifu)	cmocpeB376
Cp4.1LG09g04540	Cla009933	Watermelon (97103) v1	cpewmB029
Cp4.1LG09g04540	Csa5G623860	Cucumber (Chinese Long) v2	cpecuB041
Cp4.1LG09g04540	MELO3C012476	Melon (DHL92) v3.5.1	cpemeB024
Cp4.1LG09g04540	ClCG05G026850	Watermelon (Charleston Gray)	cpewcgB042
Cp4.1LG09g04540	CSPI05G27650	Wild cucumber (PI 183967)	cpecpiB036
Cp4.1LG09g04540	Lsi04G000240	Bottle gourd (USVL1VR-Ls)	cpelsiB032
Cp4.1LG09g04540	MELO3C012476.2	Melon (DHL92) v3.6.1	cpemedB028
Cp4.1LG09g04540	CsaV3_5G036800	Cucumber (Chinese Long) v3	cpecucB0043
Cp4.1LG09g04540	Bhi07G001026	Wax gourd	cpewgoB0059
Cp4.1LG09g04540	CsGy5G027090	Cucumber (Gy14) v2	cgybcpeB581

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g04540	Silver-seed gourd	carcpeB1017
Cp4.1LG09g04540	Silver-seed gourd	carcpeB1169
Cp4.1LG09g04540	Cucurbita pepo (Zucchini)	cpecpeB040
Cp4.1LG09g04540	Cucurbita maxima (Rimu)	cmacpeB700
Cp4.1LG09g04540	Cucurbita moschata (Rifu)	cmocpeB651