Cp4.1LG09g03370 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTCTCTTAGAAAATGAAAAACCCCGCAAATAAATACGCCTTTTTCAGGCAATCGTAAAGCCCCATCTTTCCGTCTTCGTCTCTCTCAGAGCTTCATCACTCTATCAATCAAGTTCCCGATCTCAGAGAAGACACTCACCGATTGTGATGGGGAAAGCGGATAAAGAGCGACTCACCCGAACTCTCAATTCACATCTGAATACCATCCATGAAACTTTTCAGGTTCGATTTTCAGATAATCTTCTGCTTGTAGAATTGCATTTGTATGGAGGTTCAAATTTCCGATATGGTTTCTCTTTTCGTGTTTTGACTTGTAGATGTTGGATCAAAATCCATCTTCTTCCCTTGAAGACGTGAAGTGGGAGGATGTTGTAAAAATGGGCGACCAAGTCTACAAGCAGGCGAGTGTCGGTAGGTTTCCGTTTCGTTTATAATTGTTCTTGGTATTGCAAATGTTGTTCTGCAACTATGGGGGTGGGAGAGTTGAATAGATGTATTATTAAGCTGTAAGTTGTTGATTGTAATTGCGTTTCAACAGGATTCTCAATTTTGATGTTTTGATTTGAGAATGTGTTTATCTTTAAGTCCTACGGATTTCTCTAATGACAAAGAAGTGGAAGAGATTTTTAATTCTTTTTTTTATGTTCCTAAACTTGGTTGCTTGCAGTTGATGGTTAATGGCATGAATCTAATTGGTTATATCTTTGTTTTTGCCCTGTAGCTGGAATGGTGTGGACTGGAGAAAGGCTAGAAGTTAAAGCAATTGAGGAAAACATGGCAGCTTATTTCAACATGCTGCAAGGTTTCCTCCTGGTTTCCTTTGGGAGTAAAGTGGGTGCTGGCCCTACTCTGTCTTCTGTTATCCATGCAGCTGTGAAGCAAGTAATTGATTCCAGTTTTAGGTTATGGAAGGAATCCGTCTCCTTCTATGGTAAATTACTCTTCCCCTACTTTCCATTGTAAATTTTGATCTAAACTTTCGTCATTAGGTTATCCTACATCGATCTGGAGAAGGGAAAGATCCTGTGAATTTTCTCTTGAAAGAATTGAGAGAAGGAAAAATTCTGAAGGAATAAGTGGTTTATTGTTTGCTGTTTGCTGTTCCATTTTCTGCCTCTGGACACCTTTGACAGATAGATGGTCTTGCTTTACATTGTCACTGAGTTTTGTTTAATTTACCGTTTTCCTGTATCTACCTGGCTCTTGATGTCGTTTTCGATCGAATCTAACAAATAGTGTTAAAGAATGTTAATATCATAAGTTTTGTATGATGTTGCATCTATAATGTATTGGGAACTGAATTCTGGATTAAAGTAAACTGATGCTGAATTAAGTTGGTCTTTGGGATGTTGAGGATTGTTGGGAGAGAGTCCCATATTGGCTAATTACGGGGACGATCATGGGTTTTAATCAAGAAACACTATTTCCAATGGTATGAGGCCTTTTGGGGAAACCGAAACCAAAGCCATGAGAGCTAATTCTCAAAGTGGACAATATCATACCATTTTGGAGAGTCGTGATTCCTAACATGGGAGAGGATGGATTAGTTGAACACCCACGATATAAGGAGGAGTACTCTCGAGTTCATGTTAAAGTAAATTATCTATTACATTATCATGGAGGTATAAAAGTTTTACTTTTCCAACTATCAGAAGTTCCCATCATCAAATTTTGATGATAGGGTTAAATTCAGTCACATGTTCTTGTGAGTTCCTTTTTGCATCAAGCCAAATCATAATATATGTTTGAGCTCTACAACAGTACTCCTAAATGCAATTTCGTTTTTCTCTTTTGATGACACTGAATCAACATTCTTTCAGGATCACAGAATAATAAGGATCAAAACCAAGTAGTTCCACAGTTGGTTGGTGCGGTTTGGGATGCTTGCTCTGCCCTTAAGAAGACTCCTTCCACAAATATAACTGCAATTGGCCGAGCAATAACCCAGGTAGCTGTGTCGGTGAAGGACGTCCTCCGAGAGATGAAGGATCTTAAACAAGGTTCCTCTGACTTGGATGAAGCTCCTGAAGAATCTTCTAACAAAGTAGAAGGTCATACAGAAGATGAGGGTAATACAAGCGACGATGCCGATATAGGTAACGATTTGTCAGCCGAAGAGATGAGAGTTGCTCAATCTGCCATGAGTGTTGTATCTTCAATACTTGTAGTTATAAAGGAACTCATCCGCTCTATCACAAGTTTGCTCAAGCTGGAAAATGCAAACATTCAAAGTAACATAGCGTCCTTGGAGAATCTATTGAAGCTATGCCAAGGAATAGGAGTGCAGGTCGACGAGCTTGGAGCTTGTCTTTACCCCCCACAAGAGATCCCTGCCATTAAAGCAGCTTCTGAGAAAATTTCTAGCTTTCTTGACAATATGCAGGCAGAGTTGGGAAGTCTTAATGGTAATTCAGAAGGCTTTCTTCAGGCATGCAACGATCTGCGAAATTTGTGTAAACAGCTCGAGACCGAACTAAGTGGCTCCACGGCTACTGATATAGAAAGTCGAATGGAGAATGTGACTTTAAGCAACTGAAGGAGATTATGTGATATTATCTCCAGCTCACACAACTTATTTCTGATTCAATTGTCAGCGGAGGGGGTTAGTATATTTTGATTGTTTTGGTGTGTATGTGGATAGCAATATTTACATCCAGTTTTGTTGCAATATTGGATCCAGTTTTTGTCAGTACTTCTTAAAAAAGTTCCCTATTTTTGTCGCCCCAGATCCACAGTTAGTAGATATTGTTCTCTTTGGACTTTACCTCAAGGTTTTAAAACGCATCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGATTTGTTCTCCTCCCCAACCAATTATGGGACATCATAATTTCTAAAATGATGTGGGTTAGACGAACATGACTTTTCACAATGATATGATATTGTGATGGCCCACATTGGTTGGGGAGGAGAACAAATCATCATTTATAAGGGTGTGGTTTATAAGGGTGTGGAAACCTTCCCCTAGCATACGCGTTTTAAAGCCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGCGTTGGGTCTGGGTTGTTACACAAACGAGTAATTTAGAAAGATCATTTCGAGAATACCCCTTTCTTGTCACAATTACATTACCCCATAGGAATTTTAAATGTGCAGGATCCTCAGAGATGTAAAATTTTGGTTGAATCTGCGGATTTGCCCTTCGAGCGATGGTATAAGAAGAATTTGGTCATCGCCCTGAGAGCTTGATCACCATCCAAAATGGGAGCTGCCAGAAGCACAGCTTCCACCACTACGGCCTAACGACGGGAGTGAGAGTCAGAGTCGAAAAGAGGATTCCTCACTTATTTCTCTCATTCAAAACCATGCATGAGACTTTCATCTCACACGGCTCCTAAGCAAGTTATTTGAGTAGATGTTTAACAACCTGTTCGCAGATATTGTCCTTTTTGTGCTTTCTTTTTCAGGCTTCTCTTCAAGGTTTTTAAAATAC TATTCTCTTAGAAAATGAAAAACCCCGCAAATAAATACGCCTTTTTCAGGCAATCGTAAAGCCCCATCTTTCCGTCTTCGTCTCTCTCAGAGCTTCATCACTCTATCAATCAAGTTCCCGATCTCAGAGAAGACACTCACCGATTGTGATGGGGAAAGCGGATAAAGAGCGACTCACCCGAACTCTCAATTCACATCTGAATACCATCCATGAAACTTTTCAGATGTTGGATCAAAATCCATCTTCTTCCCTTGAAGACGTGAAGTGGGAGGATGTTGTAAAAATGGGCGACCAAGTCTACAAGCAGGCGAGTGTCGCTGGAATGGTGTGGACTGGAGAAAGGCTAGAAGTTAAAGCAATTGAGGAAAACATGGCAGCTTATTTCAACATGCTGCAAGGTTTCCTCCTGGTTTCCTTTGGGAGTAAAGTGGGTGCTGGCCCTACTCTGTCTTCTGTTATCCATGCAGCTGTGAAGCAAGTAATTGATTCCAGTTTTAGGTTATGGAAGGAATCCGTCTCCTTCTATGGATCACAGAATAATAAGGATCAAAACCAAGTAGTTCCACAGTTGGTTGGTGCGGTTTGGGATGCTTGCTCTGCCCTTAAGAAGACTCCTTCCACAAATATAACTGCAATTGGCCGAGCAATAACCCAGGTAGCTGTGTCGGTGAAGGACGTCCTCCGAGAGATGAAGGATCTTAAACAAGGTTCCTCTGACTTGGATGAAGCTCCTGAAGAATCTTCTAACAAAGTAGAAGGTCATACAGAAGATGAGGGTAATACAAGCGACGATGCCGATATAGGTAACGATTTGTCAGCCGAAGAGATGAGAGTTGCTCAATCTGCCATGAGTGTTGTATCTTCAATACTTGTAGTTATAAAGGAACTCATCCGCTCTATCACAAGTTTGCTCAAGCTGGAAAATGCAAACATTCAAAGTAACATAGCGTCCTTGGAGAATCTATTGAAGCTATGCCAAGGAATAGGAGTGCAGGTCGACGAGCTTGGAGCTTGTCTTTACCCCCCACAAGAGATCCCTGCCATTAAAGCAGCTTCTGAGAAAATTTCTAGCTTTCTTGACAATATGCAGGCAGAGTTGGGAAGTCTTAATGGTAATTCAGAAGGCTTTCTTCAGGCATGCAACGATCTGCGAAATTTGTGTAAACAGCTCGAGACCGAACTAAGTGGCTCCACGGCTACTGATATAGAAAGTCGAATGGAGAATGTGACTTTAAGCAACTGAAGGAGATTATGTGATATTATCTCCAGCTCACACAACTTATTTCTGATTCAATTGTCAGCGGAGGGGGATCCTCAGAGATGTAAAATTTTGGTTGAATCTGCGGATTTGCCCTTCGAGCGATGGTATAAGAAGAATTTGGTCATCGCCCTGAGAGCTTGATCACCATCCAAAATGGGAGCTGCCAGAAGCACAGCTTCCACCACTACGGCCTAACGACGGGAGTGAGAGTCAGAGTCGAAAAGAGGATTCCTCACTTATTTCTCTCATTCAAAACCATGCATGAGACTTTCATCTCACACGGCTCCTAAGCAAGTTATTTGAGTAGATGTTTAACAACCTGTTCGCAGATATTGTCCTTTTTGTGCTTTCTTTTTCAGGCTTCTCTTCAAGGTTTTTAAAATAC ATGGGGAAAGCGGATAAAGAGCGACTCACCCGAACTCTCAATTCACATCTGAATACCATCCATGAAACTTTTCAGATGTTGGATCAAAATCCATCTTCTTCCCTTGAAGACGTGAAGTGGGAGGATGTTGTAAAAATGGGCGACCAAGTCTACAAGCAGGCGAGTGTCGCTGGAATGGTGTGGACTGGAGAAAGGCTAGAAGTTAAAGCAATTGAGGAAAACATGGCAGCTTATTTCAACATGCTGCAAGGTTTCCTCCTGGTTTCCTTTGGGAGTAAAGTGGGTGCTGGCCCTACTCTGTCTTCTGTTATCCATGCAGCTGTGAAGCAAGTAATTGATTCCAGTTTTAGGTTATGGAAGGAATCCGTCTCCTTCTATGGATCACAGAATAATAAGGATCAAAACCAAGTAGTTCCACAGTTGGTTGGTGCGGTTTGGGATGCTTGCTCTGCCCTTAAGAAGACTCCTTCCACAAATATAACTGCAATTGGCCGAGCAATAACCCAGGTAGCTGTGTCGGTGAAGGACGTCCTCCGAGAGATGAAGGATCTTAAACAAGGTTCCTCTGACTTGGATGAAGCTCCTGAAGAATCTTCTAACAAAGTAGAAGGTCATACAGAAGATGAGGGTAATACAAGCGACGATGCCGATATAGGTAACGATTTGTCAGCCGAAGAGATGAGAGTTGCTCAATCTGCCATGAGTGTTGTATCTTCAATACTTGTAGTTATAAAGGAACTCATCCGCTCTATCACAAGTTTGCTCAAGCTGGAAAATGCAAACATTCAAAGTAACATAGCGTCCTTGGAGAATCTATTGAAGCTATGCCAAGGAATAGGAGTGCAGGTCGACGAGCTTGGAGCTTGTCTTTACCCCCCACAAGAGATCCCTGCCATTAAAGCAGCTTCTGAGAAAATTTCTAGCTTTCTTGACAATATGCAGGCAGAGTTGGGAAGTCTTAATGGTAATTCAGAAGGCTTTCTTCAGGCATGCAACGATCTGCGAAATTTGTGTAAACAGCTCGAGACCGAACTAAGTGGCTCCACGGCTACTGATATAGAAAGTCGAATGGAGAATGTGACTTTAAGCAACTGA MGKADKERLTRTLNSHLNTIHETFQMLDQNPSSSLEDVKWEDVVKMGDQVYKQASVAGMVWTGERLEVKAIEENMAAYFNMLQGFLLVSFGSKVGAGPTLSSVIHAAVKQVIDSSFRLWKESVSFYGSQNNKDQNQVVPQLVGAVWDACSALKKTPSTNITAIGRAITQVAVSVKDVLREMKDLKQGSSDLDEAPEESSNKVEGHTEDEGNTSDDADIGNDLSAEEMRVAQSAMSVVSSILVVIKELIRSITSLLKLENANIQSNIASLENLLKLCQGIGVQVDELGACLYPPQEIPAIKAASEKISSFLDNMQAELGSLNGNSEGFLQACNDLRNLCKQLETELSGSTATDIESRMENVTLSN
BLAST of Cp4.1LG09g03370 vs. Swiss-Prot
Match: CCDB1_XENLA (Cyclin-D1-binding protein 1 homolog OS=Xenopus laevis GN=ccndbp1 PE=2 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-07 Identity = 52/222 (23.42%), Postives = 103/222 (46.40%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TrEMBL
Match: A0A0A0KR79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611070 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 1.9e-167 Identity = 312/364 (85.71%), Postives = 340/364 (93.41%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TrEMBL
Match: D7T8X3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04420 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 4.4e-119 Identity = 236/366 (64.48%), Postives = 293/366 (80.05%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TrEMBL
Match: M5XN58_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006856mg PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.9e-115 Identity = 229/330 (69.39%), Postives = 275/330 (83.33%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TrEMBL
Match: A0A067FBT6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017703mg PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 3.1e-112 Identity = 221/362 (61.05%), Postives = 284/362 (78.45%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TrEMBL
Match: B9T1W5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0275590 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.0e-112 Identity = 230/365 (63.01%), Postives = 281/365 (76.99%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TAIR10
Match: AT1G22970.1 (AT1G22970.1 unknown protein) HSP 1 Score: 330.5 bits (846), Expect = 1.3e-90 Identity = 184/365 (50.41%), Postives = 239/365 (65.48%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TAIR10
Match: AT1G71150.1 (AT1G71150.1 unknown protein) HSP 1 Score: 305.1 bits (780), Expect = 5.9e-83 Identity = 174/365 (47.67%), Postives = 236/365 (64.66%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. TAIR10
Match: AT1G22980.1 (AT1G22980.1 unknown protein) HSP 1 Score: 224.2 bits (570), Expect = 1.3e-58 Identity = 138/347 (39.77%), Postives = 203/347 (58.50%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. NCBI nr
Match: gi|449434576|ref|XP_004135072.1| (PREDICTED: uncharacterized protein LOC101213885 [Cucumis sativus]) HSP 1 Score: 596.7 bits (1537), Expect = 2.8e-167 Identity = 312/364 (85.71%), Postives = 340/364 (93.41%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. NCBI nr
Match: gi|700196948|gb|KGN52125.1| (hypothetical protein Csa_5G611070 [Cucumis sativus]) HSP 1 Score: 596.7 bits (1537), Expect = 2.8e-167 Identity = 312/364 (85.71%), Postives = 340/364 (93.41%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. NCBI nr
Match: gi|659091653|ref|XP_008446659.1| (PREDICTED: uncharacterized protein LOC103489322 [Cucumis melo]) HSP 1 Score: 594.3 bits (1531), Expect = 1.4e-166 Identity = 314/364 (86.26%), Postives = 338/364 (92.86%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. NCBI nr
Match: gi|645276494|ref|XP_008243312.1| (PREDICTED: cyclin-D1-binding protein 1 homolog [Prunus mume]) HSP 1 Score: 439.9 bits (1130), Expect = 4.4e-120 Identity = 237/366 (64.75%), Postives = 297/366 (81.15%), Query Frame = 1
BLAST of Cp4.1LG09g03370 vs. NCBI nr
Match: gi|225424128|ref|XP_002280178.1| (PREDICTED: uncharacterized protein LOC100243961 [Vitis vinifera]) HSP 1 Score: 436.0 bits (1120), Expect = 6.3e-119 Identity = 236/366 (64.48%), Postives = 293/366 (80.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |