Cp4.1LG09g03020 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGAGACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGATCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGATCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTACTTGCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCGTTAACTGGCGATTCGGCTGCCGATTCTCGTCGGAAGTAG ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGAGACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGATCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGATCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTACTTGCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCGTTAACTGGCGATTCGGCTGCCGATTCTCGTCGGAAGTAG ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGAGACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGATCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGATCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTACTTGCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCGTTAACTGGCGATTCGGCTGCCGATTCTCGTCGGAAGTAG MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDLNLEPTCVESDGKERRSRSHNLKSLTGDSAADSRRK
BLAST of Cp4.1LG09g03020 vs. TrEMBL
Match: A0A0A0KT67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609110 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39 Identity = 102/155 (65.81%), Postives = 116/155 (74.84%), Query Frame = 1
BLAST of Cp4.1LG09g03020 vs. TrEMBL
Match: W9RLQ4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014670 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1
BLAST of Cp4.1LG09g03020 vs. NCBI nr
Match: gi|659091522|ref|XP_008446591.1| (PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo]) HSP 1 Score: 172.6 bits (436), Expect = 5.5e-40 Identity = 104/155 (67.10%), Postives = 118/155 (76.13%), Query Frame = 1
BLAST of Cp4.1LG09g03020 vs. NCBI nr
Match: gi|700196897|gb|KGN52074.1| (hypothetical protein Csa_5G609110 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 2.7e-39 Identity = 102/155 (65.81%), Postives = 116/155 (74.84%), Query Frame = 1
BLAST of Cp4.1LG09g03020 vs. NCBI nr
Match: gi|703127237|ref|XP_010103780.1| (hypothetical protein L484_014670 [Morus notabilis]) HSP 1 Score: 60.5 bits (145), Expect = 3.1e-06 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |