Cp4.1LG09g03020 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g03020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG09 : 1755200 .. 1755664 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGAGACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGATCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGATCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTACTTGCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCGTTAACTGGCGATTCGGCTGCCGATTCTCGTCGGAAGTAG

mRNA sequence

ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGAGACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGATCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGATCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTACTTGCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCGTTAACTGGCGATTCGGCTGCCGATTCTCGTCGGAAGTAG

Coding sequence (CDS)

ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGAGACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGATCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGATCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTACTTGCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCGTTAACTGGCGATTCGGCTGCCGATTCTCGTCGGAAGTAG

Protein sequence

MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDLNLEPTCVESDGKERRSRSHNLKSLTGDSAADSRRK
BLAST of Cp4.1LG09g03020 vs. TrEMBL
Match: A0A0A0KT67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609110 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39
Identity = 102/155 (65.81%), Postives = 116/155 (74.84%), Query Frame = 1

Query: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60
           MPFELFP+SR T+RGKRKR  G+ A        GNQK+  AE G E E  +DEEVEEFF+
Sbjct: 1   MPFELFPASRSTERGKRKR--GDDA------GVGNQKDVGAEEGREAETATDEEVEEFFS 60

Query: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDL 120
           ILKRLHAATKYIEKIDGA  LLMGKR K  K++E+EGD V I+ +RIP+QKLDRNLDLDL
Sbjct: 61  ILKRLHAATKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDL 120

Query: 121 NLEPTCVESDGKERRSRSHNLKSLTGDSAADSRRK 155
           NLEP CVES+GK R  +  N K    DSAADS RK
Sbjct: 121 NLEPVCVESEGKSRERQ--NRKPSCVDSAADSCRK 145

BLAST of Cp4.1LG09g03020 vs. TrEMBL
Match: W9RLQ4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014670 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06
Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1

Query: 12  DRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMT-SDEEVEEFFAILKRLHAATKY 71
           + GKRKR        DA    G +++     G   E T ++EE +EFFAIL R+HAA  Y
Sbjct: 2   EAGKRKRR-------DAGEVDGKKRKAAEGDGPRTEATVTEEEFQEFFAILGRIHAAANY 61

Query: 72  IEKIDGARSLLMGKRAKTAKASEKEG----DGVEIRTKRIPDQKLDRNLDLDLNLEPTCV 129
           +++ DG  S  +G R      +E EG    DGV+    +  +  +D N+DLDLNLEP   
Sbjct: 62  LKRRDGKLS-AVGWREIKGSETETEGLDGEDGVKEGVSKNNEVSVDSNMDLDLNLEPPSK 115

BLAST of Cp4.1LG09g03020 vs. NCBI nr
Match: gi|659091522|ref|XP_008446591.1| (PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-40
Identity = 104/155 (67.10%), Postives = 118/155 (76.13%), Query Frame = 1

Query: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60
           MPFELFP SR TDRGKRKR  G+ A       AGNQK+ V + G E E  +DEEVEEFF+
Sbjct: 1   MPFELFPGSRSTDRGKRKR--GDDA------GAGNQKDVVTKEGKEAETATDEEVEEFFS 60

Query: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDL 120
           ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V IR +RIP+QKLDRNLDLDL
Sbjct: 61  ILKRLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDL 120

Query: 121 NLEPTCVESDGKERRSRSHNLKSLTGDSAADSRRK 155
           NLEP CVES+GK R+S+  NLK    DSAA S RK
Sbjct: 121 NLEPVCVESEGKSRQSQ--NLKPSCVDSAAVSCRK 145

BLAST of Cp4.1LG09g03020 vs. NCBI nr
Match: gi|700196897|gb|KGN52074.1| (hypothetical protein Csa_5G609110 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-39
Identity = 102/155 (65.81%), Postives = 116/155 (74.84%), Query Frame = 1

Query: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60
           MPFELFP+SR T+RGKRKR  G+ A        GNQK+  AE G E E  +DEEVEEFF+
Sbjct: 1   MPFELFPASRSTERGKRKR--GDDA------GVGNQKDVGAEEGREAETATDEEVEEFFS 60

Query: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDL 120
           ILKRLHAATKYIEKIDGA  LLMGKR K  K++E+EGD V I+ +RIP+QKLDRNLDLDL
Sbjct: 61  ILKRLHAATKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDL 120

Query: 121 NLEPTCVESDGKERRSRSHNLKSLTGDSAADSRRK 155
           NLEP CVES+GK R  +  N K    DSAADS RK
Sbjct: 121 NLEPVCVESEGKSRERQ--NRKPSCVDSAADSCRK 145

BLAST of Cp4.1LG09g03020 vs. NCBI nr
Match: gi|703127237|ref|XP_010103780.1| (hypothetical protein L484_014670 [Morus notabilis])

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-06
Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1

Query: 12  DRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMT-SDEEVEEFFAILKRLHAATKY 71
           + GKRKR        DA    G +++     G   E T ++EE +EFFAIL R+HAA  Y
Sbjct: 2   EAGKRKRR-------DAGEVDGKKRKAAEGDGPRTEATVTEEEFQEFFAILGRIHAAANY 61

Query: 72  IEKIDGARSLLMGKRAKTAKASEKEG----DGVEIRTKRIPDQKLDRNLDLDLNLEPTCV 129
           +++ DG  S  +G R      +E EG    DGV+    +  +  +D N+DLDLNLEP   
Sbjct: 62  LKRRDGKLS-AVGWREIKGSETETEGLDGEDGVKEGVSKNNEVSVDSNMDLDLNLEPPSK 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KT67_CUCSA1.9e-3965.81Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609110 PE=4 SV=1[more]
W9RLQ4_9ROSA2.1e-0638.52Uncharacterized protein OS=Morus notabilis GN=L484_014670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659091522|ref|XP_008446591.1|5.5e-4067.10PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo][more]
gi|700196897|gb|KGN52074.1|2.7e-3965.81hypothetical protein Csa_5G609110 [Cucumis sativus][more]
gi|703127237|ref|XP_010103780.1|3.1e-0638.52hypothetical protein L484_014670 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010112 regulation of systemic acquired resistance
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g03020.1Cp4.1LG09g03020.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35735FAMILY NOT NAMEDcoord: 12..130
score: 2.9

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g03020Cucurbita maxima (Rimu)cmacpeB072
Cp4.1LG09g03020Cucurbita maxima (Rimu)cmacpeB105
Cp4.1LG09g03020Cucurbita maxima (Rimu)cmacpeB300
Cp4.1LG09g03020Cucurbita maxima (Rimu)cmacpeB698
Cp4.1LG09g03020Cucurbita maxima (Rimu)cmacpeB700
Cp4.1LG09g03020Cucurbita moschata (Rifu)cmocpeB046
Cp4.1LG09g03020Cucurbita moschata (Rifu)cmocpeB081
Cp4.1LG09g03020Cucurbita moschata (Rifu)cmocpeB263
Cp4.1LG09g03020Cucurbita moschata (Rifu)cmocpeB650
Cp4.1LG09g03020Cucurbita moschata (Rifu)cmocpeB651
Cp4.1LG09g03020Wild cucumber (PI 183967)cpecpiB023
Cp4.1LG09g03020Wild cucumber (PI 183967)cpecpiB018
Cp4.1LG09g03020Cucumber (Chinese Long) v2cpecuB024
Cp4.1LG09g03020Cucumber (Chinese Long) v2cpecuB028
Cp4.1LG09g03020Bottle gourd (USVL1VR-Ls)cpelsiB024
Cp4.1LG09g03020Bottle gourd (USVL1VR-Ls)cpelsiB041
Cp4.1LG09g03020Watermelon (Charleston Gray)cpewcgB049
Cp4.1LG09g03020Watermelon (97103) v1cpewmB052
Cp4.1LG09g03020Watermelon (97103) v1cpewmB059
Cp4.1LG09g03020Melon (DHL92) v3.5.1cpemeB034
Cp4.1LG09g03020Cucumber (Gy14) v2cgybcpeB010
Cp4.1LG09g03020Melon (DHL92) v3.6.1cpemedB039
Cp4.1LG09g03020Silver-seed gourdcarcpeB0645
Cp4.1LG09g03020Silver-seed gourdcarcpeB1169
Cp4.1LG09g03020Cucumber (Chinese Long) v3cpecucB0020
Cp4.1LG09g03020Cucumber (Chinese Long) v3cpecucB0026
Cp4.1LG09g03020Wax gourdcpewgoB0029
Cp4.1LG09g03020Cucurbita pepo (Zucchini)cpecpeB022
Cp4.1LG09g03020Cucurbita pepo (Zucchini)cpecpeB026
Cp4.1LG09g03020Cucurbita pepo (Zucchini)cpecpeB037
Cp4.1LG09g03020Cucurbita pepo (Zucchini)cpecpeB040
Cp4.1LG09g03020Cucurbita pepo (Zucchini)cpecpeB054