Cp4.1LG09g02990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g02990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAccelerated cell death 11
LocationCp4.1LG09 : 1734900 .. 1737416 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGGTGCGACCCCTCTTTCCGCCATAGCCGAGTCCTTCGAAGGGCTTGCCAAATTAGTATGTTCCTTTAAGGAGGACTCCTCACAACAACTCCGATTGGATGTTCTCTGTGACGCTTGTTCTCTCGTCTCTGTTCTCTTTAGTTCTCTCGGCCTCGCCTTCAAATTCGCCGAGTTAGAGTACGTCTCCAAGGTTGTTGTTATATTCCTCCTCTCATTCTTCGTCTATTTCGATGATGAAAGATGTGTTACAACTCTCCATAATCGTATGATATTTGTCTACTTTGAGCATAAGCTCTCGTGACTTTGCTTTTTGGTTTCCTCAAAAGATCTTGTACCAATATTTTCTTGCTTATAGATTCATGATCATCCCCTTAATCAGCTAATGTCGGACTTCCTCTCAACAATCTTCCCCTTGAACAAAGTACATTATAGAGCCTCCCCTGAGGCTTAGAAAGCCCACGAACAATCTCCCCTTAATCAAGGCTCGACTCCTTTTCACTGGAGTCCTTAAACAAAATACACAATTTGTTCGACACTTGAGTCACCTTTTACTACAGCTCACAACTTTTTTGTTCGACACTGAATCACTTTTCACTACATCTCACAACTTTTTTGTTCGACGCTTGAATCACTTTTGACTACATCTCACGACTTTTTTGTTCGACACTCTGAGGATTCTATTGAAATGGCTAAGTTAAGGGCACGACTCTGATACCATGTTAGGAACTACGACTCTCCATAATGGAATGATATTGTCTACTTTTAGCACAAACTCTCGTGACTTTACTTTTAGCTTCCTAAAAGGCCGGGCCTCAGATGTATTTACTTACCTATAAATTTACGATCATCCACTTAATTAGCCAATGTGGGACTTCCTCGCCACAACGGTCAACAAGATGTTGGAAATTCTAATGGAATCACCCCTTTTGATGGTTTTTTTTTTCTTTTTCAGGTGCGTGATCTTTTGGAAGCTTCAAAGAAGCACGAGACATTGCTCACAATCCTTGATGATGATATTGCAAATGACACAGTTAAAGCACCCGGAAGCAATTCTCGCAATCTACGTCGAGTTAGACAAGGTTTGGACCTTGTTAGAGCTCTGTTTGAACAGTTCATGTCCACTGAGTAAGTTCTCTGTCCCCCTTTTCTCTTCCTTCCTGCAATCAAAACTCAGTAAGTTCACTTAAATCCTGCAATATCAATTCTCCACAAGTTAGATCTCTAAACTAAAAGTTGGGATTGGGTTAATAATGAATGCAAAGGTCAAAACTTACTAGCTTTGCTGCCTTGTATCTCTAGAGAATACTCGTTAAAGGAAGCTGCTTCAACAGCTTATACACAAGTTTGTGCGCCCTACCACCCCTGGACAGTCAGAATGGCAGTTTCTGCTGGAATGTATACTCTTCCAACGAGGGAGCAGCTTCTGCTAAATCTCAACGAGACCAGTAGGCGCATTTCATTTACTCTTTTCAATTATGAACACCTGAATCTGTTGTTTACACAATCAAAATTACAACACCTCTTTCATTCACCATTGCAGATCAGTTAGCAGAGAAGAAAATGAAAAGGTATATCGACGCTTCGGGTCCGGTCATAGAATATATTGACAAGCTTTACATTTCTAGAAATATCAGCTTGGACTGGTGACTTTCATGTCCTTCTGAGGACAACCGCTTCTTCACTTTATCTTATCTGAGCAAGCAGCACATCTCAACAGTGTTAGTATATCACAAAAAGAAGCCTTCCATGGATGCTTCAAACAAATATAAGCTTAACAGTTTCATGAAAGTATTCATGATACATGTTTTGTCTAGTGTTATTGTCTGTGTACATAATTGAATTTATAACATGTTAGATATGGAACTTTAAGGTCGCATTACCTTTCAATTTGAGTATAATAAAGTAAAAGGGTTAACATCGACATGATTTCATCACAAAGTATTGTGCTTATTGGACAATTAACAGGCAGCACTTTCTAACATCTAAACAGAGGCACAAGTTTAAAGGTTAGAAATTGCTTAAGGAACTCTCAAGAAATTTGAGTTCATTAAGCATTAAACCCTTGAATGACAAACCAACACATAATGGCTGGCTGGAATCACGAACACTAAATACCTTTGTTGATTAGACAAAACTATCTCTCATCATCCATTGAGTTTCTACCAATACAATTCCCGTCTGCAGTAACTTTGACAAAGAAAATCTACTCATTATTGCTCCTGAAATATTTCAGAAATAGAAATAAATATTAAGCAAAATCAAATATCAATAGGACCTCCAACACAAAAAGGATTCCTCTGAGGCTCAGTTTAATTCAAACTTCCATCACTCCGTGGCCAAAAGAGAATCTGGATTGTTCTTTTTCCTTCTTGCAGGCAAGTTTTAGGCGATGTTGAAACTTGAAAATGGACTTCTACAAGGTCAGGCATTCTGGATTCTCAACTATCTTTGCGAAGGTCTGAAGGAAGGCAGCTAAGTCAGCACCATAAACTATTCGATGATCGGCGGT

mRNA sequence

ATGGAAAATGGTGCGACCCCTCTTTCCGCCATAGCCGAGTCCTTCGAAGGGCTTGCCAAATTAGTATGTTCCTTTAAGGAGGACTCCTCACAACAACTCCGATTGGATGTTCTCTGTGACGCTTGTTCTCTCGTCTCTGTTCTCTTTAGTTCTCTCGGCCTCGCCTTCAAATTCGCCGAGTTAGAGTACGTGCGTGATCTTTTGGAAGCTTCAAAGAAGCACGAGACATTGCTCACAATCCTTGATGATGATATTGCAAATGACACAGTTAAAGCACCCGGAAGCAATTCTCGCAATCTACGTCGAGTTAGACAAGGTTTGGACCTTGTTAGAGCTCTGTTTGAACAGTTCATGTCCACTGAAGAATACTCGTTAAAGGAAGCTGCTTCAACAGCTTATACACAAGTTTGTGCGCCCTACCACCCCTGGACAGTCAGAATGGCAGTTTCTGCTGGAATGTATACTCTTCCAACGAGGGAGCAGCTTCTGCTAAATCTCAACGAGACCAATCAGTTAGCAGAGAAGAAAATGAAAAGGTATATCGACGCTTCGGGTCCGGTCATAGAATATATTGACAAGCTTTACATTTCTAGAAATATCAGCTTGGACTGGTGACTTTCATGTCCTTCTGAGGACAACCGCTTCTTCACTTTATCTTATCTGAGCAAGCAGCACATCTCAACAGTGTTAGTATATCACAAAAAGAAGCCTTCCATGGATGCTTCAAACAAATATAAGCTTAACAGTTTCATGAAAGTATTCATGATACATGTTTTGTCTAGTGTTATTGTCTGTGTACATAATTGAATTTATAACATGTTAGATATGGAACTTTAAGGTCGCATTACCTTTCAATTTGAGTATAATAAAGTAAAAGGGTTAACATCGACATGATTTCATCACAAAGTATTGTGCTTATTGGACAATTAACAGGCAGCACTTTCTAACATCTAAACAGAGGCACAAGTTTAAAGGTTAGAAATTGCTTAAGGAACTCTCAAGAAATTTGAGTTCATTAAGCATTAAACCCTTGAATGACAAACCAACACATAATGGCTGGCTGGAATCACGAACACTAAATACCTTTGTTGATTAGACAAAACTATCTCTCATCATCCATTGAGTTTCTACCAATACAATTCCCGTCTGCAGTAACTTTGACAAAGAAAATCTACTCATTATTGCTCCTGAAATATTTCAGAAATAGAAATAAATATTAAGCAAAATCAAATATCAATAGGACCTCCAACACAAAAAGGATTCCTCTGAGGCTCAGTTTAATTCAAACTTCCATCACTCCGTGGCCAAAAGAGAATCTGGATTGTTCTTTTTCCTTCTTGCAGGCAAGTTTTAGGCGATGTTGAAACTTGAAAATGGACTTCTACAAGGTCAGGCATTCTGGATTCTCAACTATCTTTGCGAAGGTCTGAAGGAAGGCAGCTAAGTCAGCACCATAAACTATTCGATGATCGGCGGT

Coding sequence (CDS)

ATGGAAAATGGTGCGACCCCTCTTTCCGCCATAGCCGAGTCCTTCGAAGGGCTTGCCAAATTAGTATGTTCCTTTAAGGAGGACTCCTCACAACAACTCCGATTGGATGTTCTCTGTGACGCTTGTTCTCTCGTCTCTGTTCTCTTTAGTTCTCTCGGCCTCGCCTTCAAATTCGCCGAGTTAGAGTACGTGCGTGATCTTTTGGAAGCTTCAAAGAAGCACGAGACATTGCTCACAATCCTTGATGATGATATTGCAAATGACACAGTTAAAGCACCCGGAAGCAATTCTCGCAATCTACGTCGAGTTAGACAAGGTTTGGACCTTGTTAGAGCTCTGTTTGAACAGTTCATGTCCACTGAAGAATACTCGTTAAAGGAAGCTGCTTCAACAGCTTATACACAAGTTTGTGCGCCCTACCACCCCTGGACAGTCAGAATGGCAGTTTCTGCTGGAATGTATACTCTTCCAACGAGGGAGCAGCTTCTGCTAAATCTCAACGAGACCAATCAGTTAGCAGAGAAGAAAATGAAAAGGTATATCGACGCTTCGGGTCCGGTCATAGAATATATTGACAAGCTTTACATTTCTAGAAATATCAGCTTGGACTGGTGA

Protein sequence

MENGATPLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYVRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTEEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYIDASGPVIEYIDKLYISRNISLDW
Homology
[Close]
BLAST of Cp4.1LG09g02990 vs. Swiss-Prot
Match: ACDH_ARATH (ACD11 homolog protein OS=Arabidopsis thaliana GN=At4g39670 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.5e-69
Identity = 135/204 (66.18%), Postives = 161/204 (78.92%), Query Frame = 1 

Query: 6   TPLSAIAESFEGLAKLVCSFKEDS--SQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEY 65
           TPLS I E+FE LA LV   + D     +LRLD  C AC+ VSVLF+ LG AFKFAE+EY
Sbjct: 26  TPLSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEY 85

Query: 66  ---VRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMST 125
              V+DL+EASK  ETL  ILD D+  +TVK PGS+SRNLRRVRQGLDL+RA+FEQF+  
Sbjct: 86  IAKVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIA 145

Query: 126 EEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRY 185
           ++YSLK+AA+TAYT+VCAP+H W VR AV AGMYTLPTR+QLLL LNET+Q  EK M+RY
Sbjct: 146 DDYSLKDAATTAYTEVCAPFHTWAVRTAVYAGMYTLPTRDQLLLRLNETDQSVEKNMRRY 205

Query: 186 IDASGPVIEYIDKLYISRNISLDW 205
           ++AS P+IEYIDKLYI RNI LDW
Sbjct: 206 MEASRPIIEYIDKLYIERNIKLDW 229

[Close]
BLAST of Cp4.1LG09g02990 vs. Swiss-Prot
Match: ACD11_ARATH (Accelerated cell death 11 OS=Arabidopsis thaliana GN=ACD11 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.3e-40
Identity = 91/202 (45.05%), Postives = 134/202 (66.34%), Query Frame = 1 

Query: 7   PLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYVR- 66
           PL  I+ +F+ LA +V S     + ++ +     ACSLVS LF  LG+AFKFAE++YV  
Sbjct: 9   PLRKISAAFKKLAIIVNS----PNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMDYVAK 68

Query: 67  --DLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTE-E 126
             DL+ AS    TL+ ++D DI  D V+  GS++RNL RV++GLD+V+ LFEQ +++E +
Sbjct: 69  VDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQIIASEGD 128

Query: 127 YSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYID 186
            SLK+ A+ +Y QV AP+H W +R AVS GMY LPTR  LL  L E    A+  M+ Y++
Sbjct: 129 NSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKEDEAAAKIHMQSYVN 188

Query: 187 ASGPVIEYIDKLYISRNISLDW 205
           +S P+I Y+D L++S+ + +DW
Sbjct: 189 SSAPLITYLDNLFLSKQLGIDW 206

[Close]
BLAST of Cp4.1LG09g02990 vs. TrEMBL
Match: A0A061EAR7_THECC (Glycolipid transfer protein (GLTP) family protein OS=Theobroma cacao GN=TCM_011825 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.0e-73
Identity = 148/203 (72.91%), Postives = 171/203 (84.24%), Query Frame = 1 

Query: 6   TPLSAIAESFEGLAK-LVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEY- 65
           TPLSAI E+FE L++ L C  K++   +LRLD  CDACSLVSVLFS LGLAFKFAE+EY 
Sbjct: 21  TPLSAIVEAFEELSEFLECQMKDE---ELRLDKFCDACSLVSVLFSCLGLAFKFAEMEYV 80

Query: 66  --VRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTE 125
             V DL+EASK+  TL  +LD D+A+DTVK PGS+SRNLRRVRQGLDL+RALFE+F+S+E
Sbjct: 81  AKVNDLVEASKRFATLENVLDLDVAHDTVKKPGSHSRNLRRVRQGLDLIRALFEEFLSSE 140

Query: 126 EYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYI 185
           +YSL+EAASTAY QVCAPYH W +R AVSAGMYTLPTREQLLL LNET+  AEKKM+RYI
Sbjct: 141 DYSLREAASTAYAQVCAPYHTWAIRTAVSAGMYTLPTREQLLLKLNETDHTAEKKMRRYI 200

Query: 186 DASGPVIEYIDKLYISRNISLDW 205
            AS  VIEYIDKLYISRNI+LDW
Sbjct: 201 KASRAVIEYIDKLYISRNITLDW 220

[Close]
BLAST of Cp4.1LG09g02990 vs. TrEMBL
Match: A0A0A0KWE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608590 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-72
Identity = 151/204 (74.02%), Postives = 165/204 (80.88%), Query Frame = 1 

Query: 1   MENGATPLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAE 60
           M+NGATPL+AIAESFEGLAKLV S K +SSQ+LRLD LCDACSLVS+LFSSLGLAFKFAE
Sbjct: 1   MDNGATPLTAIAESFEGLAKLVKSLK-NSSQELRLDTLCDACSLVSILFSSLGLAFKFAE 60

Query: 61  LEYVRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMST 120
           LEYV  +    K                       +SRNLRRVRQGLDL+RALFEQFMST
Sbjct: 61  LEYVSKIANRMKFE--------------------CHSRNLRRVRQGLDLIRALFEQFMST 120

Query: 121 EEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRY 180
           +EYSL++AASTAYT+VCAPYH W VR AVSAGMYTLPTREQLLL LNETNQ AEKKM+RY
Sbjct: 121 DEYSLRDAASTAYTRVCAPYHSWAVRTAVSAGMYTLPTREQLLLKLNETNQSAEKKMRRY 180

Query: 181 IDASGPVIEYIDKLYISRNISLDW 205
           I+ASGPVIEYIDKLYISR ISLDW
Sbjct: 181 INASGPVIEYIDKLYISRKISLDW 183

[Close]
BLAST of Cp4.1LG09g02990 vs. TrEMBL
Match: M5XNE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011345mg PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.6e-71
Identity = 139/201 (69.15%), Postives = 169/201 (84.08%), Query Frame = 1 

Query: 7   PLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYVR- 66
           PL++I E+FE L K + S ++   Q+L LD  C A SLVS+LFS LGLAFKFAE+EYV  
Sbjct: 14  PLTSIVEAFEELGKFLQSQQQQQQQKLSLDTFCQASSLVSILFSCLGLAFKFAEMEYVSK 73

Query: 67  --DLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTEEY 126
             DL+EASK ++TL +I+D D+AND VK PGS+SRNLRRVRQGLDL+RALFEQF+ST++Y
Sbjct: 74  VDDLVEASKTYDTLESIIDFDVANDMVKTPGSHSRNLRRVRQGLDLIRALFEQFLSTDDY 133

Query: 127 SLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYIDA 186
           SL+EAASTAY QVCAPYH WT+R AV+AGMY LP+R+QLL+NL ET+Q AEKKMKRYI A
Sbjct: 134 SLREAASTAYAQVCAPYHSWTIRTAVAAGMYALPSRDQLLVNLEETHQSAEKKMKRYIRA 193

Query: 187 SGPVIEYIDKLYISRNISLDW 205
           S PVIEYIDKLY+SR+I+LDW
Sbjct: 194 SRPVIEYIDKLYLSRSITLDW 214

[Close]
BLAST of Cp4.1LG09g02990 vs. TrEMBL
Match: A0A0B0N3Z9_GOSAR (Glycolipid transfer domain-containing protein 1 OS=Gossypium arboreum GN=F383_32479 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.3e-71
Identity = 144/202 (71.29%), Postives = 169/202 (83.66%), Query Frame = 1 

Query: 6   TPLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYV- 65
           TPLSAIA++FE L+  + S  +D  Q+LRLD  C+ACSLVSVLFS LGLAFKFAE+EYV 
Sbjct: 22  TPLSAIAKAFEELSGFLGSQTKD--QKLRLDNFCEACSLVSVLFSCLGLAFKFAEMEYVA 81

Query: 66  --RDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTEE 125
              DL+EASK + TL  +LD D+ANDTVK PGS+SRNLRRVRQGLDL+RALFE+F+ST++
Sbjct: 82  KVHDLVEASKTYATLENVLDRDVANDTVKKPGSHSRNLRRVRQGLDLIRALFEEFLSTDD 141

Query: 126 YSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYID 185
           Y LK+AASTAY+QVCAPYH W VR AVSAGMYTLPTRE+LL  LNET+  AEKKM+RYI+
Sbjct: 142 YYLKDAASTAYSQVCAPYHTWAVRTAVSAGMYTLPTREELLQKLNETDHTAEKKMRRYIE 201

Query: 186 ASGPVIEYIDKLYISRNISLDW 205
           AS PVI YIDKLY SR I+LDW
Sbjct: 202 ASRPVIAYIDKLYSSRKIALDW 221

[Close]
BLAST of Cp4.1LG09g02990 vs. TrEMBL
Match: V4SSV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033991mg PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-70
Identity = 148/201 (73.63%), Postives = 167/201 (83.08%), Query Frame = 1 

Query: 8   LSAIAESFEGLAKLVCSFK-EDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYV-- 67
           LS I  SFE LAKL+ S         LRLDV C+ACSLVSVLF+ LGLAFKFA +EYV  
Sbjct: 29  LSLIVGSFEELAKLLNSRNGRGCKTDLRLDVFCEACSLVSVLFNCLGLAFKFARMEYVTK 88

Query: 68  -RDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTEEY 127
            ++L+EASK ++ L  ILD DIANDTVKAPGS+SRNLRRVRQGLDLVRALFEQF+ST +Y
Sbjct: 89  VQNLVEASKAYDNLHDILDMDIANDTVKAPGSHSRNLRRVRQGLDLVRALFEQFLSTNDY 148

Query: 128 SLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYIDA 187
           SLKEAASTAY QVCAPYH WTVR AVSAGMYTLPTREQLLL LNET+Q A KKM+R+I+A
Sbjct: 149 SLKEAASTAYAQVCAPYHSWTVRAAVSAGMYTLPTREQLLLRLNETDQSAGKKMRRFINA 208

Query: 188 SGPVIEYIDKLYISRNISLDW 205
           S PVIEYID+L+ISRNI L+W
Sbjct: 209 SVPVIEYIDELFISRNIKLNW 229

[Close]
BLAST of Cp4.1LG09g02990 vs. TAIR10
Match: AT4G39670.1 (AT4G39670.1 Glycolipid transfer protein (GLTP) family protein)

HSP 1 Score: 261.5 bits (667), Expect = 4.2e-70
Identity = 135/204 (66.18%), Postives = 161/204 (78.92%), Query Frame = 1 

Query: 6   TPLSAIAESFEGLAKLVCSFKEDS--SQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEY 65
           TPLS I E+FE LA LV   + D     +LRLD  C AC+ VSVLF+ LG AFKFAE+EY
Sbjct: 26  TPLSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEY 85

Query: 66  ---VRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMST 125
              V+DL+EASK  ETL  ILD D+  +TVK PGS+SRNLRRVRQGLDL+RA+FEQF+  
Sbjct: 86  IAKVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIA 145

Query: 126 EEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRY 185
           ++YSLK+AA+TAYT+VCAP+H W VR AV AGMYTLPTR+QLLL LNET+Q  EK M+RY
Sbjct: 146 DDYSLKDAATTAYTEVCAPFHTWAVRTAVYAGMYTLPTRDQLLLRLNETDQSVEKNMRRY 205

Query: 186 IDASGPVIEYIDKLYISRNISLDW 205
           ++AS P+IEYIDKLYI RNI LDW
Sbjct: 206 MEASRPIIEYIDKLYIERNIKLDW 229

[Close]
BLAST of Cp4.1LG09g02990 vs. TAIR10
Match: AT2G34690.1 (AT2G34690.1 Glycolipid transfer protein (GLTP) family protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 91/202 (45.05%), Postives = 134/202 (66.34%), Query Frame = 1 

Query: 7   PLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYVR- 66
           PL  I+ +F+ LA +V S     + ++ +     ACSLVS LF  LG+AFKFAE++YV  
Sbjct: 9   PLRKISAAFKKLAIIVNS----PNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMDYVAK 68

Query: 67  --DLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTE-E 126
             DL+ AS    TL+ ++D DI  D V+  GS++RNL RV++GLD+V+ LFEQ +++E +
Sbjct: 69  VDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQIIASEGD 128

Query: 127 YSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYID 186
            SLK+ A+ +Y QV AP+H W +R AVS GMY LPTR  LL  L E    A+  M+ Y++
Sbjct: 129 NSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKEDEAAAKIHMQSYVN 188

Query: 187 ASGPVIEYIDKLYISRNISLDW 205
           +S P+I Y+D L++S+ + +DW
Sbjct: 189 SSAPLITYLDNLFLSKQLGIDW 206

[Close]
BLAST of Cp4.1LG09g02990 vs. NCBI nr
Match: gi|449435244|ref|XP_004135405.1| (PREDICTED: ceramide-1-phosphate transfer protein [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 3.8e-89
Identity = 176/207 (85.02%), Postives = 191/207 (92.27%), Query Frame = 1 

Query: 1   MENGATPLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAE 60
           M+NGATPL+AIAESFEGLAKLV S K +SSQ+LRLD LCDACSLVS+LFSSLGLAFKFAE
Sbjct: 1   MDNGATPLTAIAESFEGLAKLVKSLK-NSSQELRLDTLCDACSLVSILFSSLGLAFKFAE 60

Query: 61  LEY---VRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQF 120
           LEY   VRDL+EASKK+ETL TILD DIANDTVK PGS+SRNLRRVRQGLDL+RALFEQF
Sbjct: 61  LEYVSKVRDLVEASKKYETLHTILDADIANDTVKTPGSHSRNLRRVRQGLDLIRALFEQF 120

Query: 121 MSTEEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKM 180
           MST+EYSL++AASTAYT+VCAPYH W VR AVSAGMYTLPTREQLLL LNETNQ AEKKM
Sbjct: 121 MSTDEYSLRDAASTAYTRVCAPYHSWAVRTAVSAGMYTLPTREQLLLKLNETNQSAEKKM 180

Query: 181 KRYIDASGPVIEYIDKLYISRNISLDW 205
           +RYI+ASGPVIEYIDKLYISR ISLDW
Sbjct: 181 RRYINASGPVIEYIDKLYISRKISLDW 206

[Close]
BLAST of Cp4.1LG09g02990 vs. NCBI nr
Match: gi|659091491|ref|XP_008446579.1| (PREDICTED: ceramide-1-phosphate transfer protein [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 6.5e-89
Identity = 176/207 (85.02%), Postives = 190/207 (91.79%), Query Frame = 1 

Query: 1   MENGATPLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAE 60
           M+NG+TPL+AIAESFEGLAK V S K DSSQ+LRLD LC+ACSLVSVLFSSLGLAFKFAE
Sbjct: 1   MDNGSTPLTAIAESFEGLAKFVNSLK-DSSQELRLDTLCEACSLVSVLFSSLGLAFKFAE 60

Query: 61  LEY---VRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQF 120
           LEY   VRDL+EASKK++TL TILD DIANDTVK PGS+SRNLRRVRQGLDL+RALFEQF
Sbjct: 61  LEYVSKVRDLVEASKKYKTLHTILDADIANDTVKTPGSHSRNLRRVRQGLDLIRALFEQF 120

Query: 121 MSTEEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKM 180
           MST+EYSL+EAASTAYTQVCAPYH W VR AVSAGMYTLPTREQLLL LNETNQ AEKKM
Sbjct: 121 MSTDEYSLREAASTAYTQVCAPYHSWAVRTAVSAGMYTLPTREQLLLKLNETNQSAEKKM 180

Query: 181 KRYIDASGPVIEYIDKLYISRNISLDW 205
           +RYI+ASGPVIEYIDKLYISR ISLDW
Sbjct: 181 RRYINASGPVIEYIDKLYISRKISLDW 206

[Close]
BLAST of Cp4.1LG09g02990 vs. NCBI nr
Match: gi|590700852|ref|XP_007046258.1| (Glycolipid transfer protein (GLTP) family protein [Theobroma cacao])

HSP 1 Score: 282.0 bits (720), Expect = 8.5e-73
Identity = 148/203 (72.91%), Postives = 171/203 (84.24%), Query Frame = 1 

Query: 6   TPLSAIAESFEGLAK-LVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEY- 65
           TPLSAI E+FE L++ L C  K++   +LRLD  CDACSLVSVLFS LGLAFKFAE+EY 
Sbjct: 21  TPLSAIVEAFEELSEFLECQMKDE---ELRLDKFCDACSLVSVLFSCLGLAFKFAEMEYV 80

Query: 66  --VRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTE 125
             V DL+EASK+  TL  +LD D+A+DTVK PGS+SRNLRRVRQGLDL+RALFE+F+S+E
Sbjct: 81  AKVNDLVEASKRFATLENVLDLDVAHDTVKKPGSHSRNLRRVRQGLDLIRALFEEFLSSE 140

Query: 126 EYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYI 185
           +YSL+EAASTAY QVCAPYH W +R AVSAGMYTLPTREQLLL LNET+  AEKKM+RYI
Sbjct: 141 DYSLREAASTAYAQVCAPYHTWAIRTAVSAGMYTLPTREQLLLKLNETDHTAEKKMRRYI 200

Query: 186 DASGPVIEYIDKLYISRNISLDW 205
            AS  VIEYIDKLYISRNI+LDW
Sbjct: 201 KASRAVIEYIDKLYISRNITLDW 220

[Close]
BLAST of Cp4.1LG09g02990 vs. NCBI nr
Match: gi|700196894|gb|KGN52071.1| (hypothetical protein Csa_5G608590 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 2.5e-72
Identity = 151/204 (74.02%), Postives = 165/204 (80.88%), Query Frame = 1 

Query: 1   MENGATPLSAIAESFEGLAKLVCSFKEDSSQQLRLDVLCDACSLVSVLFSSLGLAFKFAE 60
           M+NGATPL+AIAESFEGLAKLV S K +SSQ+LRLD LCDACSLVS+LFSSLGLAFKFAE
Sbjct: 1   MDNGATPLTAIAESFEGLAKLVKSLK-NSSQELRLDTLCDACSLVSILFSSLGLAFKFAE 60

Query: 61  LEYVRDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMST 120
           LEYV  +    K                       +SRNLRRVRQGLDL+RALFEQFMST
Sbjct: 61  LEYVSKIANRMKFE--------------------CHSRNLRRVRQGLDLIRALFEQFMST 120

Query: 121 EEYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRY 180
           +EYSL++AASTAYT+VCAPYH W VR AVSAGMYTLPTREQLLL LNETNQ AEKKM+RY
Sbjct: 121 DEYSLRDAASTAYTRVCAPYHSWAVRTAVSAGMYTLPTREQLLLKLNETNQSAEKKMRRY 180

Query: 181 IDASGPVIEYIDKLYISRNISLDW 205
           I+ASGPVIEYIDKLYISR ISLDW
Sbjct: 181 INASGPVIEYIDKLYISRKISLDW 183

[Close]
BLAST of Cp4.1LG09g02990 vs. NCBI nr
Match: gi|702420912|ref|XP_010066731.1| (PREDICTED: glycolipid transfer protein-like [Eucalyptus grandis])

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 144/203 (70.94%), Postives = 170/203 (83.74%), Query Frame = 1 

Query: 6   TPLSAIAESFEGLAKLVCSFKEDS-SQQLRLDVLCDACSLVSVLFSSLGLAFKFAELEYV 65
           TPLS IAE+FE +A L+    +D  S +LRLD  CDACSLVSVLF  LGLAFKFAE+EYV
Sbjct: 31  TPLSGIAEAFEEMAGLLLRPPDDGRSVELRLDKFCDACSLVSVLFGCLGLAFKFAEMEYV 90

Query: 66  ---RDLLEASKKHETLLTILDDDIANDTVKAPGSNSRNLRRVRQGLDLVRALFEQFMSTE 125
              RDL+EASK H TL  ILD D+AND+V+ PGS++RNLRRVRQGLDL+RALFEQF+S++
Sbjct: 91  AKVRDLVEASKTHRTLQNILDLDVANDSVRTPGSHTRNLRRVRQGLDLIRALFEQFLSSD 150

Query: 126 EYSLKEAASTAYTQVCAPYHPWTVRMAVSAGMYTLPTREQLLLNLNETNQLAEKKMKRYI 185
           +YSLK+AA+TAYTQVCAP+H W +R AV AGMY LP R+QLLL LNET++ AEKKM+RYI
Sbjct: 151 DYSLKDAATTAYTQVCAPFHTWAIRTAVYAGMYALPYRDQLLLKLNETDKTAEKKMRRYI 210

Query: 186 DASGPVIEYIDKLYISRNISLDW 205
            AS PVI+YIDKLYISRNISLDW
Sbjct: 211 KASIPVIQYIDKLYISRNISLDW 233

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g02990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACDH_ARATH7.5e-6966.18ACD11 homolog protein OS=Arabidopsis thaliana GN=At4g39670 PE=2 SV=1[more]
ACD11_ARATH4.3e-4045.05Accelerated cell death 11 OS=Arabidopsis thaliana GN=ACD11 PE=1 SV=1[more]
BLAST of Cp4.1LG09g02990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061EAR7_THECC6.0e-7372.91Glycolipid transfer protein (GLTP) family protein OS=Theobroma cacao GN=TCM_0118... [more]
A0A0A0KWE8_CUCSA1.7e-7274.02Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608590 PE=4 SV=1[more]
M5XNE2_PRUPE5.6e-7169.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011345mg PE=4 SV=1[more]
A0A0B0N3Z9_GOSAR7.3e-7171.29Glycolipid transfer domain-containing protein 1 OS=Gossypium arboreum GN=F383_32... [more]
V4SSV3_9ROSI2.8e-7073.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033991mg PE=4 SV=1[more]
BLAST of Cp4.1LG09g02990 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39670.14.2e-7066.18 Glycolipid transfer protein (GLTP) family protein[more]
AT2G34690.12.4e-4145.05 Glycolipid transfer protein (GLTP) family protein[more]
BLAST of Cp4.1LG09g02990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435244|ref|XP_004135405.1|3.8e-8985.02PREDICTED: ceramide-1-phosphate transfer protein [Cucumis sativus][more]
gi|659091491|ref|XP_008446579.1|6.5e-8985.02PREDICTED: ceramide-1-phosphate transfer protein [Cucumis melo][more]
gi|590700852|ref|XP_007046258.1|8.5e-7372.91Glycolipid transfer protein (GLTP) family protein [Theobroma cacao][more]
gi|700196894|gb|KGN52071.1|2.5e-7274.02hypothetical protein Csa_5G608590 [Cucumis sativus][more]
gi|702420912|ref|XP_010066731.1|1.6e-7170.94PREDICTED: glycolipid transfer protein-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051861glycolipid binding
GO:0017089glycolipid transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0046836glycolipid transport
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR014830Glycolipid_transfer_prot_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046836 glycolipid transport
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0008150 biological_process
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009723 response to ethylene
biological_process GO:0010200 response to chitin
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0010286 heat acclimation
biological_process GO:0006984 ER-nucleus signaling pathway
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0050832 defense response to fungus
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0009738 abscisic acid-activated signaling pathway
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0017089 glycolipid transporter activity
molecular_function GO:0051861 glycolipid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g02990.1Cp4.1LG09g02990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014830Glycolipid transfer protein domainGENE3DG3DSA:1.10.3520.10coord: 3..204
score: 5.3
IPR014830Glycolipid transfer protein domainPFAMPF08718GLTPcoord: 37..167
score: 1.2
IPR014830Glycolipid transfer protein domainunknownSSF110004Glycolipid transfer protein, GLTPcoord: 31..204
score: 1.83
NoneNo IPR availableunknownCoilCoilcoord: 159..183
scor
NoneNo IPR availablePANTHERPTHR10219GLYCOLIPID TRANSFER PROTEIN-RELATEDcoord: 6..204
score: 1.6E
NoneNo IPR availablePANTHERPTHR10219:SF28SUBFAMILY NOT NAMEDcoord: 6..204
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g02990Cucsa.283670Cucumber (Gy14) v1cgycpeB0745
Cp4.1LG09g02990CmaCh04G015350Cucurbita maxima (Rimu)cmacpeB696
Cp4.1LG09g02990CmoCh18G010390Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g02990CmoCh04G016080Cucurbita moschata (Rifu)cmocpeB649
Cp4.1LG09g02990Cla020387Watermelon (97103) v1cpewmB031
Cp4.1LG09g02990Csa5G608590Cucumber (Chinese Long) v2cpecuB041
Cp4.1LG09g02990MELO3C012236Melon (DHL92) v3.5.1cpemeB024
Cp4.1LG09g02990ClCG05G022810Watermelon (Charleston Gray)cpewcgB045
Cp4.1LG09g02990CSPI05G25170Wild cucumber (PI 183967)cpecpiB036
Cp4.1LG09g02990Lsi04G002630Bottle gourd (USVL1VR-Ls)cpelsiB032
Cp4.1LG09g02990MELO3C012236.2Melon (DHL92) v3.6.1cpemedB028
Cp4.1LG09g02990CsaV3_5G034220Cucumber (Chinese Long) v3cpecucB0043
Cp4.1LG09g02990Bhi07G001116Wax gourdcpewgoB0058
Cp4.1LG09g02990CsGy5G024640Cucumber (Gy14) v2cgybcpeB581
Cp4.1LG09g02990Carg21581Silver-seed gourdcarcpeB1448
Cp4.1LG09g02990Carg01816Silver-seed gourdcarcpeB1171
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g02990Cp4.1LG01g13450Cucurbita pepo (Zucchini)cpecpeB035
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g02990Cucumber (Chinese Long) v3cpecucB0020
Cp4.1LG09g02990Cucumber (Chinese Long) v3cpecucB0026
Cp4.1LG09g02990Wax gourdcpewgoB0029
Cp4.1LG09g02990Cucurbita pepo (Zucchini)cpecpeB026
Cp4.1LG09g02990Cucurbita pepo (Zucchini)cpecpeB037
Cp4.1LG09g02990Cucurbita pepo (Zucchini)cpecpeB040
Cp4.1LG09g02990Cucurbita pepo (Zucchini)cpecpeB054
Cp4.1LG09g02990Cucurbita maxima (Rimu)cmacpeB072
Cp4.1LG09g02990Cucurbita maxima (Rimu)cmacpeB105
Cp4.1LG09g02990Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g02990Cucurbita maxima (Rimu)cmacpeB700
Cp4.1LG09g02990Cucurbita moschata (Rifu)cmocpeB046
Cp4.1LG09g02990Cucurbita moschata (Rifu)cmocpeB081
Cp4.1LG09g02990Cucurbita moschata (Rifu)cmocpeB651
Cp4.1LG09g02990Wild cucumber (PI 183967)cpecpiB023
Cp4.1LG09g02990Wild cucumber (PI 183967)cpecpiB018
Cp4.1LG09g02990Cucumber (Chinese Long) v2cpecuB024
Cp4.1LG09g02990Cucumber (Chinese Long) v2cpecuB028
Cp4.1LG09g02990Bottle gourd (USVL1VR-Ls)cpelsiB024
Cp4.1LG09g02990Bottle gourd (USVL1VR-Ls)cpelsiB041
Cp4.1LG09g02990Watermelon (Charleston Gray)cpewcgB049
Cp4.1LG09g02990Watermelon (97103) v1cpewmB052
Cp4.1LG09g02990Watermelon (97103) v1cpewmB059
Cp4.1LG09g02990Melon (DHL92) v3.5.1cpemeB034
Cp4.1LG09g02990Cucumber (Gy14) v2cgybcpeB010
Cp4.1LG09g02990Melon (DHL92) v3.6.1cpemedB039
Cp4.1LG09g02990Silver-seed gourdcarcpeB0645
Cp4.1LG09g02990Silver-seed gourdcarcpeB1169