Cp4.1LG09g02140 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g02140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDUF538 family protein
LocationCp4.1LG09 : 1197598 .. 1199896 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGCAACAGCGCGGAACAGAATTTAGAGCGCCACAATTCACATTTGACAGTTGCGCCGTTGTTTTCTCTTGGTAGCTTCAGATTTATATGGATGCGGCTCGCGTTCTCTCCAGTACTCCCATTTCGCCGTTTTCTTCTATCATCGCTGTGTTTTAGAGGAAGAGAAGCTCGGTCCGAGCTGCGAAAATGGAGAAGGCTTTGACCAAGGTGAGCAGCTTGAAGGTTGGGAGCTTGTGGGTTTCAAAGAAAGCCAAGGAGGAATTCTCCAACATCACCGACGATTTCCATGTGAGTTTCTCGTTTTGTTTTTTCTTTGTGTTTGTTGATTTTGTTCTCTCGTTCGATCGTTTATTGTACCCTCTGCTGCCTGTGGTTTTCTTTGATTTTGAGTGTTGGTTTCTTTTTGTTTTTCGCGATTTAAGTAATGCAGCTCGATTTGATTGACATTGTCTGTGGATTTTGTGCTGATTTTGCGTTGATTATTGCTTATTACCAAGATTTAAGGTGAGATCCGTTGGTTTCTTCCACTAATCAGAGGATTAAGCGACAGGGTTACGATTGAAGTGAAAATGGACTGATGAGGCTTCTTGGGATTTGGTTGTTTGCATCAGTTTGATTGAAAAGAAACCTTGGGATTTGGTTTCTTCCACTAATTATATTTATCAACCAAAATCTATTGGGATAAGACTCCTTGATCTGTACTAGAATGAGATCTTATATGTTAGTATTTGGAATCTGTCTGTGAAAAATGAGGATTTCTCTTTTTGCAATGGTTCTTCAGTTAATTATCAATATTGGTATCAGTTAAAACGCTGAATATCTTTCGATTTCTGTGTAGGCAAACATTAAACTTAGAACTTGGTTAGAATCTCATATATGTTGTTGTTTATTGCAGACTTTTTCAAGCACGGTTGAAGAGAAGGCAAAGTGGATCTTCAACAAGCTAAAAGGTAACTTCTAGCATATTATCTCATTTTATATCAGGATGAGTGCACACTTAATGCTGGTTTTGATGAGCGAAGTGCAGGACAATCCCCACCATAGCCTCTCAACTCCTCCAAAAAGTCCCTATGAATTAGCCCTCATAAGGTATTGTTGTGAGATCCCACATCGGTTGAAGAAGGGAATGAAACATTCCTTATAAGGGTGTGGAAATCTCTCTTTAGTAGACTATTTTAAAACTTTGAGGGGAAGCCCAAAAGGGAAAACCCGAAGAGGACAATATATGCTAGTGGTGAGTTTGGGCTGTTACAAATGGTATTATAGCCAGACACTAGACGATGTGCTAGCGAGGACGCTGGGCTCCAAGGGGTGGATTGTGAGATCTCACATTGGTTAGAGAGGGGAATGAAACATTCTTATATTATAAGGGTGTGAAAATCTCTCACTTACAGACGCGTTCTAAAACCTTGAGGTAGATCTCGAAAGGAAAAATCCAAAGAGGATAATATCTAGTAGACGCGTTCTAAAACCTTGTTTTGTAAACTATCTTTTAGTCCCTTATGACTGCTGCCCCTCTTCCCTTGTGTTAAGTTGTAAGAGATTCAAGTGAGCATAATGCTGTAAGATTGGTCATATCTTTTTCCTCCCACAGGAAAGCCATTGAAGAGCTTACCAGATTTACTTCGCGAGTACAACTTACCACCCGGCCTCTTTCCTCAGAACATAACCTGCTACGAATTTGATGAATCCAAGTCGAAGCTGATCGTCTACTTACCATCGGTTTGCGAGATAAGCTTCAAGGATTCGTCTGTAATCCGATATGCAACACGGGTTAAAGGAACTCTTCAGAGAGGGAAGCTCACAGGCATTGAAGGAATGAAGACAAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGACGGTTGAGGGCTACAAATCTGATAAGGTATGGTTCACTGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCCTATGATAAGCCCCGTGATGCCGTTAGGGTAGAAGCATTCTGATATTCGAACCATGGCGCGCTGCTGTTAGGTATGAAGCTGAGATATGAACCCTGTAGTTACATTTGCTGCATCATTCAATCTGCATTGTTCAAATATATAGAAAGCTTAATCTTGTCAACTTTATAGATATTGTTTTAATGAGGTTTATAGATTCTCTGTAGTCATGAATGTTCTAAAAATTTGTTATCAGTTTGTGGAAATGAAAAGGCTTTTATCCATTGGATGAATAAACACAACTCATAGATGCGAAAGGATGCAACTCGTAGAAGAGTTGCATACCATTTATAAATACTTTCTAAAACTAAACTAAAATTTTACTTTTGT

mRNA sequence

TTAGCAACAGCGCGGAACAGAATTTAGAGCGCCACAATTCACATTTGACAGTTGCGCCGTTGTTTTCTCTTGGTAGCTTCAGATTTATATGGATGCGGCTCGCGTTCTCTCCAGTACTCCCATTTCGCCGTTTTCTTCTATCATCGCTGTGTTTTAGAGGAAGAGAAGCTCGGTCCGAGCTGCGAAAATGGAGAAGGCTTTGACCAAGGTGAGCAGCTTGAAGGTTGGGAGCTTGTGGGTTTCAAAGAAAGCCAAGGAGGAATTCTCCAACATCACCGACGATTTCCATACTTTTTCAAGCACGGTTGAAGAGAAGGCAAAGTGGATCTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCTTACCAGATTTACTTCGCGAGTACAACTTACCACCCGGCCTCTTTCCTCAGAACATAACCTGCTACGAATTTGATGAATCCAAGTCGAAGCTGATCGTCTACTTACCATCGGTTTGCGAGATAAGCTTCAAGGATTCGTCTGTAATCCGATATGCAACACGGGTTAAAGGAACTCTTCAGAGAGGGAAGCTCACAGGCATTGAAGGAATGAAGACAAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGACGGTTGAGGGCTACAAATCTGATAAGGTATGGTTCACTGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCCTATGATAAGCCCCGTGATGCCGTTAGGGTAGAAGCATTCTGATATTCGAACCATGGCGCGCTGCTGTTAGGTATGAAGCTGAGATATGAACCCTGTAGTTACATTTGCTGCATCATTCAATCTGCATTGTTCAAATATATAGAAAGCTTAATCTTGTCAACTTTATAGATATTGTTTTAATGAGGTTTATAGATTCTCTGTAGTCATGAATGTTCTAAAAATTTGTTATCAGTTTGTGGAAATGAAAAGGCTTTTATCCATTGGATGAATAAACACAACTCATAGATGCGAAAGGATGCAACTCGTAGAAGAGTTGCATACCATTTATAAATACTTTCTAAAACTAAACTAAAATTTTACTTTTGT

Coding sequence (CDS)

ATGGAGAAGGCTTTGACCAAGGTGAGCAGCTTGAAGGTTGGGAGCTTGTGGGTTTCAAAGAAAGCCAAGGAGGAATTCTCCAACATCACCGACGATTTCCATACTTTTTCAAGCACGGTTGAAGAGAAGGCAAAGTGGATCTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCTTACCAGATTTACTTCGCGAGTACAACTTACCACCCGGCCTCTTTCCTCAGAACATAACCTGCTACGAATTTGATGAATCCAAGTCGAAGCTGATCGTCTACTTACCATCGGTTTGCGAGATAAGCTTCAAGGATTCGTCTGTAATCCGATATGCAACACGGGTTAAAGGAACTCTTCAGAGAGGGAAGCTCACAGGCATTGAAGGAATGAAGACAAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGACGGTTGAGGGCTACAAATCTGATAAGGTATGGTTCACTGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCCTATGATAAGCCCCGTGATGCCGTTAGGGTAGAAGCATTCTGA

Protein sequence

MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF
Homology
[Close]
BLAST of Cp4.1LG09g02140 vs. Swiss-Prot
Match: Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.4e-47
Identity = 86/167 (51.50%), Postives = 129/167 (77.25%), Query Frame = 1 

Query: 12  KVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPG 71
           KVGS W+ +KA ++F ++ +D ++ S+++E   KW+ NK+KGK  K LP+LL+EY+LP G
Sbjct: 7   KVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIG 66

Query: 72  LFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTK 131
           +FP + T YEFDE   KL V +PS+CE+ +KDSSV+++ T V G L++GKLT +EG+KTK
Sbjct: 67  IFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126

Query: 132 VLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           V++WVKVTS++ +   + KV+FTAG+KKSRS+DAY+  R+ +RV+ F
Sbjct: 127 VMIWVKVTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170

[Close]
BLAST of Cp4.1LG09g02140 vs. TrEMBL
Match: A0A0A0KSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606500 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.8e-86
Identity = 161/178 (90.45%), Postives = 170/178 (95.51%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVGSLW+SKKAKEE +NITDD +TFS+TVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDLNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+TCYEFDESKSKLIVYLPS CEISFKDSSV+RYATRVKGTLQRG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLT IEGMKTKVLVWVKVTSV+VEGYKSDKVWFTAGVKKSRSKDAY+KP DA+RV  F
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. TrEMBL
Match: A0A0B0MMU6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22922 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-82
Identity = 154/178 (86.52%), Postives = 164/178 (92.13%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVG LW+SKKAKEEFSNIT+D  TFS+TVEEKAKW+FNKLKGKP KSLP
Sbjct: 1   MEKALTKVGSLKVGGLWISKKAKEEFSNITEDLTTFSNTVEEKAKWVFNKLKGKPTKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+ CYEFDE+K+KLIVY+ S CE+SFKDSSVIRYATRVKG L RG
Sbjct: 61  DLLREYNLPPGLFPQNVICYEFDETKAKLIVYMSSPCEVSFKDSSVIRYATRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLTGIEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSR KDAY+ PRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVAVEGYKSDKVWFTAGVKKSRPKDAYETPRDAVRVEEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. TrEMBL
Match: A0A061EHN1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011610 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.7e-82
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVG LW+SKKAKEEFSNIT+D  TFS+TVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVGSLKVGGLWISKKAKEEFSNITEDLSTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+ CYEFDESK+KLIVYL S CE+SFKDSSVIRYATRVKG L RG
Sbjct: 61  DLLREYNLPPGLFPQNVVCYEFDESKAKLIVYLSSPCEVSFKDSSVIRYATRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLTGIEGMKTKVLVWVKVTSV VE  KSDKVWFTAGVKKSR KDAY+ PRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVAVESCKSDKVWFTAGVKKSRPKDAYEAPRDAVRVEEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. TrEMBL
Match: A0A0D2W4A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G090600 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-81
Identity = 153/178 (85.96%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVG LW+SKKAKEEFSNIT+D  TFS+TVEEKAKW+FNKLKGKP KSLP
Sbjct: 1   MEKALTKVGSLKVGGLWISKKAKEEFSNITEDLTTFSNTVEEKAKWVFNKLKGKPTKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+ CYEFDE+K+KLIVY+ S CE+SFKDSSVIRYA RVKG L RG
Sbjct: 61  DLLREYNLPPGLFPQNVICYEFDETKAKLIVYMSSPCEVSFKDSSVIRYAMRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLTGIEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSR KDAY+ PRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVAVEGYKSDKVWFTAGVKKSRPKDAYETPRDAVRVEEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. TrEMBL
Match: B9HXM8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16980g PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.8e-81
Identity = 153/178 (85.96%), Postives = 166/178 (93.26%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           ME+ALTKV+SLKVGSLW+SKKAKEEFSNIT+D +TFS+TVEEKAKW+FNKLKGKPLKSLP
Sbjct: 1   MERALTKVNSLKVGSLWISKKAKEEFSNITEDLNTFSTTVEEKAKWVFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFP+NITCYEFDE+K+KLIVYLPSVCEISF DSSVIRYATRVK  L RG
Sbjct: 61  DLLREYNLPPGLFPRNITCYEFDETKAKLIVYLPSVCEISFNDSSVIRYATRVKAILVRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLT IEGMKTKVLVWVKVTSV VEG+KSDKVWFTAGVKKSR K AYD P+ A+RVE F
Sbjct: 121 KLTVIEGMKTKVLVWVKVTSVAVEGFKSDKVWFTAGVKKSRPKIAYDVPQTAIRVEEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. TAIR10
Match: AT2G03350.1 (AT2G03350.1 Protein of unknown function, DUF538)

HSP 1 Score: 286.2 bits (731), Expect = 1.4e-77
Identity = 139/175 (79.43%), Postives = 155/175 (88.57%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV+S KVGS W+SKKAKEE SNIT+D  TFSSTVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVTSFKVGSSWISKKAKEELSNITNDLTTFSSTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLL+EYNLPPGLFPQNI CYEFDE+K+KL V+  S CE++FKD S IRYATRVKG L RG
Sbjct: 61  DLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRV 176
           KL G+EGMKTKVLVWVKVT+++VE  KSDK+WFTAGVKKSRSKD YD P DA++V
Sbjct: 121 KLMGVEGMKTKVLVWVKVTTISVESSKSDKLWFTAGVKKSRSKDVYDTPHDAIKV 175

[Close]
BLAST of Cp4.1LG09g02140 vs. TAIR10
Match: AT5G37070.1 (AT5G37070.1 Protein of unknown function, DUF538)

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-49
Identity = 89/167 (53.29%), Postives = 127/167 (76.05%), Query Frame = 1 

Query: 12  KVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPG 71
           KVGS W+ +KA +EF+++ DDF++ SS++E   KW+ NKLKGK  K LP+LL+E+ LP G
Sbjct: 7   KVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKEFGLPVG 66

Query: 72  LFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTK 131
           +FPQ+ T YEF+E   KL V++P  CE+ ++DSSV+R++T V G L++GKL  +EGMKTK
Sbjct: 67  IFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKGKLAEVEGMKTK 126

Query: 132 VLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           V++WVKVT ++ +   S KV+FTAG+KKSRS+DAY+  R  V V+ F
Sbjct: 127 VMIWVKVTCISAD---SSKVYFTAGIKKSRSRDAYEVIRPGVGVDKF 170

[Close]
BLAST of Cp4.1LG09g02140 vs. TAIR10
Match: AT3G08890.1 (AT3G08890.1 Protein of unknown function, DUF538)

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-48
Identity = 87/167 (52.10%), Postives = 126/167 (75.45%), Query Frame = 1 

Query: 12  KVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPG 71
           KVGS W+ KKA ++  ++ DD ++ SS++E   KW+ NK+KGK  K LP+LL+E+ LP G
Sbjct: 7   KVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKEFGLPVG 66

Query: 72  LFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTK 131
           +FP++ T YEF+E   KL V++PS+CE+ +KD+SV+R+ T V G L++GKL  +EGMKTK
Sbjct: 67  IFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADVEGMKTK 126

Query: 132 VLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           V++WVKVTS++ +   S KV FTAG+KKSRS+DAY+  RD V ++ F
Sbjct: 127 VMIWVKVTSISAD---SSKVHFTAGMKKSRSRDAYEVLRDGVEIDKF 170

[Close]
BLAST of Cp4.1LG09g02140 vs. TAIR10
Match: AT5G01610.1 (AT5G01610.1 Protein of unknown function, DUF538)

HSP 1 Score: 188.7 bits (478), Expect = 3.0e-48
Identity = 86/167 (51.50%), Postives = 129/167 (77.25%), Query Frame = 1 

Query: 12  KVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLPDLLREYNLPPG 71
           KVGS W+ +KA ++F ++ +D ++ S+++E   KW+ NK+KGK  K LP+LL+EY+LP G
Sbjct: 7   KVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIG 66

Query: 72  LFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRGKLTGIEGMKTK 131
           +FP + T YEFDE   KL V +PS+CE+ +KDSSV+++ T V G L++GKLT +EG+KTK
Sbjct: 67  IFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126

Query: 132 VLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           V++WVKVTS++ +   + KV+FTAG+KKSRS+DAY+  R+ +RV+ F
Sbjct: 127 VMIWVKVTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170

[Close]
BLAST of Cp4.1LG09g02140 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 40/133 (30.08%), Postives = 62/133 (46.62%), Query Frame = 1 

Query: 47  IFNKLKGKPLKSLPDLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSV 106
           +F +L   P  S  D LRE NLP G+ P+ +T +  D    +  V LP  C+  F++   
Sbjct: 19  LFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQFH 78

Query: 107 IRYATRVKGTLQRGKLTGIEGMKTKVL-VWVKVTSVTVEGYKSDKVWFTAGV-KKSRSKD 166
             Y   + G L  G++  + G+  K L +W  V  + V+   S  + F  GV  K  S  
Sbjct: 79  FDY--NISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLS 138

Query: 167 AYDKPRDAVRVEA 178
            ++ PRD    E+
Sbjct: 139 LFESPRDCTAAES 149

[Close]
BLAST of Cp4.1LG09g02140 vs. NCBI nr
Match: gi|659091176|ref|XP_008446410.1| (PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 5.3e-87
Identity = 162/178 (91.01%), Postives = 171/178 (96.07%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVGSLW+SKKAKEE +NITDDF+TFS+TVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDFNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+TCYEFDESKSKLIVYLPS CEISFKDSSV+RYATRVKGTLQRG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLT IEGMKTKVLVWVKVTSV+VEGYKSDKVWFTAGVKKSRSKDAY+KP DA+RV  F
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. NCBI nr
Match: gi|449434748|ref|XP_004135158.1| (PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86
Identity = 161/178 (90.45%), Postives = 170/178 (95.51%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVGSLW+SKKAKEE +NITDD +TFS+TVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDLNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+TCYEFDESKSKLIVYLPS CEISFKDSSV+RYATRVKGTLQRG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLT IEGMKTKVLVWVKVTSV+VEGYKSDKVWFTAGVKKSRSKDAY+KP DA+RV  F
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. NCBI nr
Match: gi|728814991|gb|KHG01697.1| (hypothetical protein F383_22922 [Gossypium arboreum])

HSP 1 Score: 312.8 bits (800), Expect = 3.9e-82
Identity = 154/178 (86.52%), Postives = 164/178 (92.13%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVG LW+SKKAKEEFSNIT+D  TFS+TVEEKAKW+FNKLKGKP KSLP
Sbjct: 1   MEKALTKVGSLKVGGLWISKKAKEEFSNITEDLTTFSNTVEEKAKWVFNKLKGKPTKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+ CYEFDE+K+KLIVY+ S CE+SFKDSSVIRYATRVKG L RG
Sbjct: 61  DLLREYNLPPGLFPQNVICYEFDETKAKLIVYMSSPCEVSFKDSSVIRYATRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLTGIEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSR KDAY+ PRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVAVEGYKSDKVWFTAGVKKSRPKDAYETPRDAVRVEEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. NCBI nr
Match: gi|590699579|ref|XP_007045962.1| (Uncharacterized protein TCM_011610 [Theobroma cacao])

HSP 1 Score: 312.0 bits (798), Expect = 6.7e-82
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVG LW+SKKAKEEFSNIT+D  TFS+TVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVGSLKVGGLWISKKAKEEFSNITEDLSTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+ CYEFDESK+KLIVYL S CE+SFKDSSVIRYATRVKG L RG
Sbjct: 61  DLLREYNLPPGLFPQNVVCYEFDESKAKLIVYLSSPCEVSFKDSSVIRYATRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLTGIEGMKTKVLVWVKVTSV VE  KSDKVWFTAGVKKSR KDAY+ PRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVAVESCKSDKVWFTAGVKKSRPKDAYEAPRDAVRVEEF 178

[Close]
BLAST of Cp4.1LG09g02140 vs. NCBI nr
Match: gi|823260646|ref|XP_012463044.1| (PREDICTED: uncharacterized protein At5g01610 [Gossypium raimondii])

HSP 1 Score: 310.5 bits (794), Expect = 2.0e-81
Identity = 153/178 (85.96%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60
           MEKALTKV SLKVG LW+SKKAKEEFSNIT+D  TFS+TVEEKAKW+FNKLKGKP KSLP
Sbjct: 1   MEKALTKVGSLKVGGLWISKKAKEEFSNITEDLTTFSNTVEEKAKWVFNKLKGKPTKSLP 60

Query: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120
           DLLREYNLPPGLFPQN+ CYEFDE+K+KLIVY+ S CE+SFKDSSVIRYA RVKG L RG
Sbjct: 61  DLLREYNLPPGLFPQNVICYEFDETKAKLIVYMSSPCEVSFKDSSVIRYAMRVKGILLRG 120

Query: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 179
           KLTGIEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSR KDAY+ PRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVAVEGYKSDKVWFTAGVKKSRPKDAYETPRDAVRVEEF 178

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g02140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5161_ARATH5.4e-4751.50Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1[more]
BLAST of Cp4.1LG09g02140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSU5_CUCSA1.8e-8690.45Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606500 PE=4 SV=1[more]
A0A0B0MMU6_GOSAR2.7e-8286.52Uncharacterized protein OS=Gossypium arboreum GN=F383_22922 PE=4 SV=1[more]
A0A061EHN1_THECC4.7e-8287.64Uncharacterized protein OS=Theobroma cacao GN=TCM_011610 PE=4 SV=1[more]
A0A0D2W4A5_GOSRA1.4e-8185.96Uncharacterized protein OS=Gossypium raimondii GN=B456_013G090600 PE=4 SV=1[more]
B9HXM8_POPTR6.8e-8185.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16980g PE=4 SV=1[more]
BLAST of Cp4.1LG09g02140 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03350.11.4e-7779.43 Protein of unknown function, DUF538[more]
AT5G37070.14.7e-4953.29 Protein of unknown function, DUF538[more]
AT3G08890.11.8e-4852.10 Protein of unknown function, DUF538[more]
AT5G01610.13.0e-4851.50 Protein of unknown function, DUF538[more]
AT5G16380.11.1e-1030.08 Protein of unknown function, DUF538[more]
BLAST of Cp4.1LG09g02140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091176|ref|XP_008446410.1|5.3e-8791.01PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo][more]
gi|449434748|ref|XP_004135158.1|2.6e-8690.45PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus][more]
gi|728814991|gb|KHG01697.1|3.9e-8286.52hypothetical protein F383_22922 [Gossypium arboreum][more]
gi|590699579|ref|XP_007045962.1|6.7e-8287.64Uncharacterized protein TCM_011610 [Theobroma cacao][more]
gi|823260646|ref|XP_012463044.1|2.0e-8185.96PREDICTED: uncharacterized protein At5g01610 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007493DUF538
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g02140.1Cp4.1LG09g02140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007493Protein of unknown function DUF538GENE3DG3DSA:2.30.240.10coord: 39..176
score: 2.4
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 61..166
score: 2.7
IPR007493Protein of unknown function DUF538unknownSSF141562At5g01610-likecoord: 11..176
score: 1.05
NoneNo IPR availablePANTHERPTHR31676FAMILY NOT NAMEDcoord: 29..178
score: 4.3E
NoneNo IPR availablePANTHERPTHR31676:SF5SUBFAMILY NOT NAMEDcoord: 29..178
score: 4.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g02140Cucsa.112980Cucumber (Gy14) v1cgycpeB0248
Cp4.1LG09g02140Cucsa.284700Cucumber (Gy14) v1cgycpeB0745
Cp4.1LG09g02140CmaCh18G011210Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g02140CmaCh04G016870Cucurbita maxima (Rimu)cmacpeB695
Cp4.1LG09g02140CmoCh18G011420Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g02140CmoCh04G017680Cucurbita moschata (Rifu)cmocpeB647
Cp4.1LG09g02140Cla010219Watermelon (97103) v1cpewmB031
Cp4.1LG09g02140Cla018587Watermelon (97103) v1cpewmB051
Cp4.1LG09g02140Csa1G038930Cucumber (Chinese Long) v2cpecuB026
Cp4.1LG09g02140Csa5G606500Cucumber (Chinese Long) v2cpecuB041
Cp4.1LG09g02140MELO3C012133Melon (DHL92) v3.5.1cpemeB024
Cp4.1LG09g02140MELO3C002004Melon (DHL92) v3.5.1cpemeB029
Cp4.1LG09g02140ClCG04G012040Watermelon (Charleston Gray)cpewcgB040
Cp4.1LG09g02140ClCG05G023900Watermelon (Charleston Gray)cpewcgB045
Cp4.1LG09g02140CSPI05G24120Wild cucumber (PI 183967)cpecpiB036
Cp4.1LG09g02140CSPI01G05850Wild cucumber (PI 183967)cpecpiB018
Cp4.1LG09g02140Lsi02G000930Bottle gourd (USVL1VR-Ls)cpelsiB024
Cp4.1LG09g02140Lsi04G003820Bottle gourd (USVL1VR-Ls)cpelsiB032
Cp4.1LG09g02140MELO3C002004.2Melon (DHL92) v3.6.1cpemedB034
Cp4.1LG09g02140MELO3C012133.2Melon (DHL92) v3.6.1cpemedB028
Cp4.1LG09g02140CsaV3_1G005740Cucumber (Chinese Long) v3cpecucB0020
Cp4.1LG09g02140CsaV3_5G033120Cucumber (Chinese Long) v3cpecucB0043
Cp4.1LG09g02140Bhi07G001240Wax gourdcpewgoB0058
Cp4.1LG09g02140Bhi08G000952Wax gourdcpewgoB0051
Cp4.1LG09g02140CsGy5G023670Cucumber (Gy14) v2cgybcpeB581
Cp4.1LG09g02140CsGy1G005600Cucumber (Gy14) v2cgybcpeB009
Cp4.1LG09g02140Carg17297Silver-seed gourdcarcpeB0146
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g02140Cp4.1LG01g12220Cucurbita pepo (Zucchini)cpecpeB034
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g02140Silver-seed gourdcarcpeB0067
Cp4.1LG09g02140Silver-seed gourdcarcpeB0342
Cp4.1LG09g02140Cucumber (Chinese Long) v3cpecucB0027
Cp4.1LG09g02140Cucumber (Chinese Long) v3cpecucB0047
Cp4.1LG09g02140Wax gourdcpewgoB0023
Cp4.1LG09g02140Wax gourdcpewgoB0062
Cp4.1LG09g02140Cucurbita pepo (Zucchini)cpecpeB031
Cp4.1LG09g02140Cucurbita pepo (Zucchini)cpecpeB054
Cp4.1LG09g02140Cucurbita maxima (Rimu)cmacpeB458
Cp4.1LG09g02140Watermelon (Charleston Gray)cpewcgB049
Cp4.1LG09g02140Watermelon (97103) v1cpewmB059
Cp4.1LG09g02140Melon (DHL92) v3.5.1cpemeB034
Cp4.1LG09g02140Cucumber (Gy14) v2cgybcpeB014
Cp4.1LG09g02140Melon (DHL92) v3.6.1cpemedB039