Cp4.1LG09g01560 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGTGGCGTTTGAAGGAGACACATCCATACACGTGCCCAGAAGTTGAGGTATTTGCGATAAATTCTCGAACAACATGTTTGTTTATTGACCGAGAAGCTTTCCGATCTGATTCCTGAAACTCAGCTGATAAAGCACAACAAATCGTAAGAACACATCGAACAACATCCTTTGATTTGAGGTAAGTATAATATGGTTTTCTAAGCATTTCAATCGCGAGATATGGCACAAGAAACGCTGGTTAAGTATTCTGCATTGTCAAACTGTGAATCTTACTTTGAGCGCATTCAATCCACGAAGAAACTTCCAAAGCCCTTACAGGAGACGCTCAATCATGCGTTTTCCAGGATCCCAGTTTCATCGTTTCCTGGAGTTCCAGGAGGCAAAGGTAATAATGAATGCCAACGATTTTTACAATTTCAGAACTTAGAACATATGTTTATGAATCAAAGATTGGTTGTTTGTAGTTATTGAGATTCCAGCAGACACAACTATTGCTAATGCTGTGAAGATTCTATCTGAATGCAAAATTTTATCAGCTCCTGTAACGAATCCAAATGCAAGAGAAGATATGAGTTGGAGAGATAGGTACCTAGGGATTGTAGATTATTCGGCGATTATCTTGTGGGTGTTGGAGAGTGCAGAAATTGCCGCGGCTGTTTTATCCGCTGGTTCAGCCACGGCTGTTGGAGTTGGTGCAGGGGCAGTTGGTGCTATTGGAGCGATGGCATTAGGTGCCACAGGCCCCGTTGCAGTTGCAGGGATAGCTGCAGCCGCGGTGGGAGCTGCTGTGGCTGGTGGCGTTGCTGTTGACAAAGGGATCGGTAAGGATGCTCCCACGGCTGCTGATTGTTTAGGAGGTGACTTTTACAAAGTCCTACTGCAAGAAGAACCGTTCAAATCAACAACTGTAAGCTCTTAAACTACGCTACACAAAGTCTTGGTATTGATAAGCCATTGACATTTCGATATTCCAGGTCGAGTTAATATTGAAATCCTACCGCTGGGTTCCATTTCTTCCGGTGACCCAAAACAATTCCATGTTGTGTATCTTACTGCTACTCTCAAAATATAGATTGAGGAATGTTCCTGTCATTGAATCAGGAAAACCCGGCCTCAAGAATTACATAACTCAATCTGCAATAGTTCAGGGTCTTGAAAGGTGTAGAGGAAGGGACTGGTTCGACTGTATAGCTGCGAGACCCATTTCTGATTTGGGACTTCCTTTCATGTCATGTCACGACGCAAGTATTTGTAGTGGCTGGCTGATTTGGGTTTTGTAATGTTCTTTGTTTTTTTGTTCAACTTTAACTGTTCTTTGTCGTTTTGGTCAGGTTATTAGCATCCAAAGCGAAGAGTTGATACTGGAAGCTTTCAAGAAAATGAGAGATAATCATATTGGTGGCCTTCCAGTCGTCGAGGGGCCAAGGAAAAGGATTGTGGGAAATATAAGTATAAGAGACGTAAGATATTTGCTGCTTACACCTGAACTTTTCTCCAATTTCAGGTAGAATCACGAACCTCTCCAATGGTATGATATTACCCACTTTGAGTATAAGCATTCATGGTTTTGCTTTTTGTTTACTGAAAATGCCTCATATTAGTAGAGATAGTGTTCTTTACTTATAAATCCATGATCAACCCCTTAATTAGCCGATATGGGACTCTTCTCCCAACAATTCTAAACAATCCTTCCCTCGAACAAAGTACCTCATAGAGCCTCCCCTGAGATTTATGGAACCTTCGAACAATCTCCCCTTAATCGAGGCTCAACTCCTTCTCTAGAGCCCCCTCGAACAAAGTGCACCTTTTGGTCGACACTTGAGTCATTGTTGACTTCACCTTCGAGTCTTACAACCTCTTGTTTGTTGACATGGCTAAGTTAAGGGCATGACTCTGATACCATGTTAAGAATTATGAACGGTATGATATTGTCCACTTTGAGTGCTCAAAGTTCTCGTGACTCTGCTTTTGGTTTTTGGTTTCCTCTAAAGGTCTCACTCCAATAGAGAGACATCCTCTTAATTAGTCGATGTGAGACTCTTCTCCCAACAATTTTCAACGCTATGCACGTTGAATTACGTTTCTTCACGAAATGCTCTAAGAAACATACTTGGAATGGATAGTGTAGTGATGAATTTAGATAGTCTATTTAATCTTTTATGTTTTTTTGTGTTGGGTTTCAGGAAGCTTACTGTCATGGATTTCATCAAAATAGTTGCTACGTTGCCCGAAGATGTTGGAAGACTTGCCCCACCAATTACATGCAAACTTGAATCAACTCTTGGCTCTGTTATTAATAGTCTTGCTTCCAAGTCAGTCCACAGGATCTATGTGGTAGCTGGTGATGAGGAACTTGTCGGGGTTATCACCCTAAGGGATGTCATCTCCTGCTTCATTTTTGAACCACCCAACTACATAATCAACCACTTTGGATTCTCTGCTGAAGAAATGTTGAATGAGTCGCAACTATAAGTTTTCTCGAACATACGACCGATATCAAAGATGTAAAAGAGAGTTGTAAATTTTGGTTCAACATTAAAGTGTGGTAGAAGAAATAATCGATATTGTATGGTACTCTCGAGCTCTTATGATTTTACTTTTGGTTTCTTCAAAATGTGTCTTATGATTTTGTTTTTGATTTTTTCGTTCAAAATGTGTCATATTAATGGGGATAGTGTTATCTATT ATGGCAACATTTCAATCGCGAGATATGGCACAAGAAACGCTGGTTAAGTATTCTGCATTGTCAAACTGTGAATCTTACTTTGAGCGCATTCAATCCACGAAGAAACTTCCAAAGCCCTTACAGGAGACGCTCAATCATGCGTTTTCCAGGATCCCAGTTTCATCGTTTCCTGGAGTTCCAGGAGGCAAAGTTATTGAGATTCCAGCAGACACAACTATTGCTAATGCTGTGAAGATTCTATCTGAATGCAAAATTTTATCAGCTCCTGTAACGAATCCAAATGCAAGAGAAGATATGAGTTGGAGAGATAGGTACCTAGGGATTGTAGATTATTCGGCGATTATCTTGTGGGTGTTGGAGAGTGCAGAAATTGCCGCGGCTGTTTTATCCGCTGGTTCAGCCACGGCTGTTGGAGTTGGTGCAGGGGCAGTTGGTGCTATTGGAGCGATGGCATTAGGTGCCACAGGCCCCGTTGCAGTTGCAGGGATAGCTGCAGCCGCGGTGGGAGCTGCTGTGGCTGGTGGCGTTGCTGTTGACAAAGGGATCGGTAAGGATGCTCCCACGGCTGCTGATTGTTTAGGAGGTGACTTTTACAAAGTCCTACTGCAAGAAGAACCGTTCAAATCAACAACTGTCGAGTTAATATTGAAATCCTACCGCTGGGTTCCATTTCTTCCGGTGACCCAAAACAATTCCATGTTGTGTATCTTACTGCTACTCTCAAAATATAGATTGAGGAATGTTCCTGTCATTGAATCAGGAAAACCCGGCCTCAAGAATTACATAACTCAATCTGCAATAGTTCAGGGTCTTGAAAGGTGTAGAGGAAGGGACTGGTTCGACTGTATAGCTGCGAGACCCATTTCTGATTTGGGACTTCCTTTCATGAAGCTTACTGTCATGGATTTCATCAAAATAGTTGCTACGTTGCCCGAAGATGTTGGAAGACTTGCCCCACCAATTACATGCAAACTTGAATCAACTCTTGGCTCTGTTATTAATAGTCTTGCTTCCAAGTCAGTCCACAGGATCTATGTGGTAGCTGGTGATGAGGAACTTGTCGGGGTTATCACCCTAAGGGATGTCATCTCCTGCTTCATTTTTGAACCACCCAACTACATAATCAACCACTTTGGATTCTCTGCTGAAGAAATGTTGAATGAGTCGCAACTATAAGTTTTCTCGAACATACGACCGATATCAAAGATGTAAAAGAGAGTTGTAAATTTTGGTTCAACATTAAAGTGTGGTAGAAGAAATAATCGATATTGTATGGTACTCTCGAGCTCTTATGATTTTACTTTTGGTTTCTTCAAAATGTGTCTTATGATTTTGTTTTTGATTTTTTCGTTCAAAATGTGTCATATTAATGGGGATAGTGTTATCTATT ATGGCAACATTTCAATCGCGAGATATGGCACAAGAAACGCTGGTTAAGTATTCTGCATTGTCAAACTGTGAATCTTACTTTGAGCGCATTCAATCCACGAAGAAACTTCCAAAGCCCTTACAGGAGACGCTCAATCATGCGTTTTCCAGGATCCCAGTTTCATCGTTTCCTGGAGTTCCAGGAGGCAAAGTTATTGAGATTCCAGCAGACACAACTATTGCTAATGCTGTGAAGATTCTATCTGAATGCAAAATTTTATCAGCTCCTGTAACGAATCCAAATGCAAGAGAAGATATGAGTTGGAGAGATAGGTACCTAGGGATTGTAGATTATTCGGCGATTATCTTGTGGGTGTTGGAGAGTGCAGAAATTGCCGCGGCTGTTTTATCCGCTGGTTCAGCCACGGCTGTTGGAGTTGGTGCAGGGGCAGTTGGTGCTATTGGAGCGATGGCATTAGGTGCCACAGGCCCCGTTGCAGTTGCAGGGATAGCTGCAGCCGCGGTGGGAGCTGCTGTGGCTGGTGGCGTTGCTGTTGACAAAGGGATCGGTAAGGATGCTCCCACGGCTGCTGATTGTTTAGGAGGTGACTTTTACAAAGTCCTACTGCAAGAAGAACCGTTCAAATCAACAACTGTCGAGTTAATATTGAAATCCTACCGCTGGGTTCCATTTCTTCCGGTGACCCAAAACAATTCCATGTTGTGTATCTTACTGCTACTCTCAAAATATAGATTGAGGAATGTTCCTGTCATTGAATCAGGAAAACCCGGCCTCAAGAATTACATAACTCAATCTGCAATAGTTCAGGGTCTTGAAAGGTGTAGAGGAAGGGACTGGTTCGACTGTATAGCTGCGAGACCCATTTCTGATTTGGGACTTCCTTTCATGAAGCTTACTGTCATGGATTTCATCAAAATAGTTGCTACGTTGCCCGAAGATGTTGGAAGACTTGCCCCACCAATTACATGCAAACTTGAATCAACTCTTGGCTCTGTTATTAATAGTCTTGCTTCCAAGTCAGTCCACAGGATCTATGTGGTAGCTGGTGATGAGGAACTTGTCGGGGTTATCACCCTAAGGGATGTCATCTCCTGCTTCATTTTTGAACCACCCAACTACATAATCAACCACTTTGGATTCTCTGCTGAAGAAATGTTGAATGAGTCGCAACTATAA MATFQSRDMAQETLVKYSALSNCESYFERIQSTKKLPKPLQETLNHAFSRIPVSSFPGVPGGKVIEIPADTTIANAVKILSECKILSAPVTNPNAREDMSWRDRYLGIVDYSAIILWVLESAEIAAAVLSAGSATAVGVGAGAVGAIGAMALGATGPVAVAGIAAAAVGAAVAGGVAVDKGIGKDAPTAADCLGGDFYKVLLQEEPFKSTTVELILKSYRWVPFLPVTQNNSMLCILLLLSKYRLRNVPVIESGKPGLKNYITQSAIVQGLERCRGRDWFDCIAARPISDLGLPFMKLTVMDFIKIVATLPEDVGRLAPPITCKLESTLGSVINSLASKSVHRIYVVAGDEELVGVITLRDVISCFIFEPPNYIINHFGFSAEEMLNESQL
BLAST of Cp4.1LG09g01560 vs. Swiss-Prot
Match: KINGL_ARATH (SNF1-related protein kinase regulatory subunit gamma-1-like OS=Arabidopsis thaliana GN=CBSCBS2 PE=1 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 4.4e-110 Identity = 216/346 (62.43%), Postives = 267/346 (77.17%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma-1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-31 Identity = 90/255 (35.29%), Postives = 135/255 (52.94%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TrEMBL
Match: A0A0A0KQI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604350 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 1.6e-135 Identity = 256/288 (88.89%), Postives = 273/288 (94.79%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TrEMBL
Match: N1QZH9_AEGTA (Uncharacterized protein OS=Aegilops tauschii GN=F775_07412 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 2.7e-114 Identity = 221/382 (57.85%), Postives = 286/382 (74.87%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TrEMBL
Match: W9R1E4_9ROSA (SNF1-related protein kinase regulatory subunit gamma-1-like protein OS=Morus notabilis GN=L484_021098 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 8.6e-113 Identity = 231/379 (60.95%), Postives = 276/379 (72.82%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TrEMBL
Match: A0A061EAS3_THECC (Cystathionine beta-synthase protein isoform 1 OS=Theobroma cacao GN=TCM_011791 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.3e-112 Identity = 225/365 (61.64%), Postives = 276/365 (75.62%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TrEMBL
Match: A0A061ECA3_THECC (Cystathionine beta-synthase protein isoform 2 OS=Theobroma cacao GN=TCM_011791 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 4.7e-111 Identity = 213/298 (71.48%), Postives = 250/298 (83.89%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TAIR10
Match: AT1G69800.2 (AT1G69800.2 Cystathionine beta-synthase (CBS) protein) HSP 1 Score: 399.4 bits (1025), Expect = 2.5e-111 Identity = 216/346 (62.43%), Postives = 267/346 (77.17%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. TAIR10
Match: AT3G48530.1 (AT3G48530.1 SNF1-related protein kinase regulatory subunit gamma 1) HSP 1 Score: 139.0 bits (349), Expect = 6.0e-33 Identity = 90/255 (35.29%), Postives = 135/255 (52.94%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. NCBI nr
Match: gi|449434819|ref|XP_004135193.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Cucumis sativus]) HSP 1 Score: 490.7 bits (1262), Expect = 2.3e-135 Identity = 256/288 (88.89%), Postives = 273/288 (94.79%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. NCBI nr
Match: gi|659091005|ref|XP_008446319.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like isoform X2 [Cucumis melo]) HSP 1 Score: 482.6 bits (1241), Expect = 6.3e-133 Identity = 254/288 (88.19%), Postives = 271/288 (94.10%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. NCBI nr
Match: gi|659091003|ref|XP_008446318.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like isoform X1 [Cucumis melo]) HSP 1 Score: 482.6 bits (1241), Expect = 6.3e-133 Identity = 254/288 (88.19%), Postives = 271/288 (94.10%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. NCBI nr
Match: gi|1012169829|ref|XP_015965438.1| (PREDICTED: LOW QUALITY PROTEIN: SNF1-related protein kinase regulatory subunit gamma-1-like [Arachis duranensis]) HSP 1 Score: 428.7 bits (1101), Expect = 1.1e-116 Identity = 246/416 (59.13%), Postives = 291/416 (69.95%), Query Frame = 1
BLAST of Cp4.1LG09g01560 vs. NCBI nr
Match: gi|475576231|gb|EMT17490.1| (hypothetical protein F775_07412 [Aegilops tauschii]) HSP 1 Score: 420.2 bits (1079), Expect = 3.9e-114 Identity = 221/382 (57.85%), Postives = 286/382 (74.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|