Cp4.1LG08g13310 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG08g13310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAuxin response factor
LocationCp4.1LG08 : 9539692 .. 9547817 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTGTCTCGCTGACAGCGTGACTACGCTAAGTGTCAGGCATTTATTGATCTATCAGACCGCCTCTACCTCATAGATACTATTTGCTGTTGTTCTTGGTTGGTAATAAATATCTTTAAAGGAGTTAATCCTGGTTATAATTGTGTTCAGCTTTATCCCATATGTTCTTCGTAGGCAGTAAATCATTCAATTAGATACTTGTGATTTTTTTGTTTAACACATCCACCACCGCTTTTGCAGGTCGGCCCTTAGGTTGATTGGCACATAAATATCTCTCCGATATTATCATGTCTTTTTCAGCTGTCTCAAGTCTTCCCCCAGGAGGACCCACTTCAGGTTTGTGGTTCTTGTTCATGAAGTTGTGTTCATTTTTTTAGATTCTAGTCATTGTTGGTCTCAGCGAGAGATTTGTCGTTGATGATCTAAAAGAATGAACCTTGGGTTTTAGAAAATCTACGTTTAAAATTAAGAGACATGTCATAGTTTTTCCTGTCCCTCAAGTAAGCAGAGTATTCTTGCCTACTTTGTTGCATGAATGTCTGAATCCTCGAGTAAACTTGAGGGGTGGGCTTTGTTTAAATTGCACTGGTACTGAAGACGGTTCTGTTTGGTAAGTTGGTGGAACAAGGTAAAGTTCTGTAGGGTTTGACTTTTAGTGACCTTCACTGCAAAAATCATTCTCTTTTGTTGTCTATGGGGATTCTTCTTTGAGAAAGATGACTATCGTTTTTGTGGAAGTTGCGGCAATTAAGTACAGAGTTTCCAAAGGTGCTGGTGGTCTATCCCTAATTGGCTAGTAAGCACTCTAAAGGCTCCTGCAAATGTTAAAGTTGAAATAGCATCTGAAATATAATGAGCAATATAAAAACCACTTGATTCTGGGATGATTTATGGAAAGCAAATGAGGCACTCTTATCCATTTATTGAAGACTATTCTATTTCTATTAGTTAAAGATTCTTTGTAGGCAAGTTCAGAATGCTTCAAACTTGTCTTGGTGACTGGAATTTTGTTGCTGATGTCAAAACTCAATATTGGATATTCCTTATGGATAGCCTTGCTCGCTTCTTTCTTACACTTAATATAGCAATGGATGACCAATTGAGCTGCACTTTATGACGCTTCCAGATCCTTCAGATGTAAACATGGAGTTGTAGAATATTGATCTGCTTTCGCAGCAGTTATGTTGTTATCCTTATGAGCATTAAGTGAAAGGTTTCGATAGGGGATGGTAGTTGAATCTGTTTCTAGGAGGAAGGATTGTTGGATCAGTATTGATGCCTTATAAGCACATTGACTTGATTGCATCCGCATCTTTGCAATCTTTTGCTTCTCTCTATGTCATAGAAGCTGAAAATCATAAAAAGTTTAGGTGTTTCGCATGGGTGGTGGTGGTTTATGGCAAGGTGGGTTAACCCTATTGTTGTTATTGAGACACTCTGGTCCTCTTCCATGTTTCTTTTGTCGCGATGGGGTGTATGCTTTACCAACATAGGTCGCAAGACTTAAATCACCTCCGTGGGTGCATATATGTGTGCTCTTTGGATGCTAAGTTGTGGAGCAGTTTTAGCAAACTTTTGGGATCTCCATAGACTAGAGGGTTCAATGTCATGCTACGGTGCAGGTCGAGTTTTTAAGTGTTATAATGTGTATGTTGTACCTAATCTCAGATGGTATCTGATGAAATTTTATAGTTTATGCGATTGTTATTTTGATTTCAAGAGGCATTTTAATGAGGATGTATGTTAGTCCAGAATGTAGGAGAACATTTTGTTAAAAGTATTTAAATTTAATCAAGTATAAGGTAACTCTATACTGTATTGTGTAAATCTTTTTTATTACAACTGTTTAGTTTTACTAAAATTTTTCGTTCCATTACCGTATATTTATTCAGCCTTCTGTTTCCTTATTGAATACGTACCATGTTTTTTTTATTTACAGGGCCCTCTTCAGATGCATTGTATAGGGAATTATGGCATGCCTGTGCTGGACCGCTTGTCACCCTTCCTCGCCAAGATGAACGAGTATACTACTTTCCACAGGGTCACATGGAACAGGTATCAGATTTTGTGACACATGCTCACCGTTTACTCACTAGACCATGTAGGGGGAAAATGTTAATATTTCTGAATTGATCTGACATTTCAAGGTAGCCTGTGAGAAAAATGTTAATATTTGTCTTCTTAGTATTAACATTGAGTGATGAACTTTGTAATTGTCTAAGAAGCATGGATATGGATATAAGACATAGATAACACTGACATGTTTATTATATTATATATTTTAAAATAACATTTTTATAACCGAAGGAAATGCAAAGTCAATAAGTTTATGTATTTATATGCTTAAAAAACGAGTTTGATGTATTTTACTCTCTAAATTATTATTTTTGTCCTATGTTATCATGTATCTATTCAGGATACCTGACAACAATTGTTTGATTTGTGTTTAAAAAATTTTGGGACCCATATTGACTTTGTACAACTTCTAATACATCTATTAGACTAATAAGTACTTGATCCAACTAGTGTCATAGTGTCCTACATGTGTTGGATATGGACACGCTAGCTAAACTAAAATTTTCGTGCTTCTTAGGTAATTGTATTTCCTCTGTAATTAACTTACTGGAATTCGAGTCTTTATTTGTTAACTCCTACTCTAGATTTCTTGTAACATGTAATTGTTCTCTTCCCCAGATCAATGGGAAGAGTTTCTTGTTCATAAAATGTTCCTGAAAATTTTAGAGGTTCACAGAGTTTTCTTTTTCTTGTATGTTTAGCTGGAAGCATCAATGCATCAAGGATTAGAGCAACAAATGCCTTCGTTCAACCTACCATCAAAAATACTTTGTAAAGTTGTCAATGTTGTTCTTCGGGTGAGTTTTATCCCATTAATTTTTATTGCATATGGTGGTATATTTTTGCTGCTTTTCCCGTATCTTTGACGAACTGATTTGACATCTCACTTTGATTGTTAGGCGGAACCTGACACAGATGAAGTGTATGCTCAGATAACTCTGTTACCGGAAAGCAATGTTAGTTCTGTACTCTCACTTTGTAAACTATTGAACTATAGTAGCAGCCATCACTCCCCTCTATAGTGTGGATTTCTGCCAAGAATTCTCAATGCTTGCATTATTTTTCTGAACTGATTGTGGTGCTCAATCCCTTTCCTGTTTTTAGTAATAATTTTATTGATATCTCTAACTTGCCCATGTATTTTTTTCCGAGTAGCAAAGTGAAGTAACAAGCCCAGATCCTGCCCTTCCTGAGCCTACAAGATGTAATGTCCACTCATTTTGCAAGACGCTCACTGCTTCTGACACTAGCACTCATGGTGGCTTCTCTGTTCTTAGGAGGCATGCGGATGACTGCCTTCCACCTCTGGTAGAACATCTAAATGATATTGCCAGCTAGCATCCATTTTCTGTCTCTCTTCCTTGTTTTAAAGTCCGTTTGTTTTTCAGGATATGTCTCAGCAGCCACCGTGGCAAGAATTGGTTGCGAGTGACTTACATGGGAATCAGTGGCATTTTCGGCACATTTTCAGAGGTATAATTTATAGAGCTAACAAGTAGCTGCCATGCAAAGAGCTATAGATATTTGCTGTCTCCTGGCAAATAAAAAATTTTAGTCATGCATTTATGCATAAATACATACAAATTCACATTCATACATTTTTTTGTTGGGCTTGAAGAGAGTTCTCATTTGCCATTTCCCTCTCTTAATTATTTTACTGTTGGAGTTTATGTACTCGAGAACTAACATCTGGTAAGTATTTGGAATTTGGTACACCTCCGGTAAAGAAAAGGGAAAAAGTTATATGGGTTCATACTATTGCTGGTAAATTATTGCATGATTTGTTTTACATGACGTGAACAGTTTTTTTTAGTTTTTTAGTGTTTTCTCTTCTTTCCCCCGTGATTGTGATATTCATACATGAATTGCAGGTCAACCAAGGCGTCATTTACTAACAACTGGGTGGAGCGTCTTCGTTAGTTCCAAAAAACTAGTAGCTGGAGATGCTTTTATCTTTTTAAGGTAATTTTGTGGTCTGCCATTTGAGAGGAGTGTCTATTTTCTTTGTGAGGTAAAGATGATTCTTGAGTGAACAAGTTCATGATCTCTTTGGTTATATGTGTATTTCTTCACAGAGGTGAAAATGGAGAGCTTCGTGTTGGGGTGAGAAGACTCATGAGACAGCTAAATAATATGCCATCTTCTGTTATATCCAGTCACAGCATGCATCTCGGAGTTCTAGCTACTGCTTCTCATGCTGTTTCAACTGGAACACTCTTTTCTGTTTTTTATAAGCCACGGTTTGTTGTCCTTATTATGTTATTTACTTTTACTCTGATACCACGAGTTCTTTTTCCCTCCCCAAGTTAAATAATTTTACTGTGAATAATGGGCTTTTGTACTTGACACTGTGAGTCGAGTGTTCACTTTTTCGATTGCTTTGTGATTTGTCTGTTACAAGTGGAAAAATCCTGAATATTCTTCCTTATGGCAGAACAAGCAGGTCTACATTTCTTGTGAGTCTAAACAAGTACCTTGAAGCTCAAAACCATAAACTCTCTGTTGGGATGAGGTTCAAGATGAGGTTTGAAGGCGAGGAGGTTCCTGAAAGAAGGTAACTGTTTCGTGCTCCCCAATCTCTTTTTTCCTTTCATTGTTGAGTTGATATATTAATTTTTCTTATATTCTTTGACAGTTTTAGTGGAACAATTGTTGGTCTTGGAGATAATGCATCGCCTGGATGGGCTAATTCTGACTGGCGATCTCTAAAGGTTAGCTAATTCCGGAATAATGCTTCTCATGTTTTTTTCCTGAAGTCCAGTCTTGAAACATTATGTGATGTGTATAGATGCTGTGCTCCCTCTTTCTTTGAGTTCAATATCTTATATGGATACTAATACAGAATAGTTAACACAAACCTTATTGTCTAAGATGCATGTTTGAACATAGACATTCATGAAATGGCTGGTGTTTGGAATGATAAAAAGAAAAGATTCGTGTATTAGCTGAATTTAAAAGCCCTTGGGCCTTAAAGAGTTAAAAATATATAAGGATTCGATGGTAACTGTTAATTGCAATCAGAATGTCGCTGAAATGTGTAGCAGGCATTTGCCAGTGCAGTTTGGGATTTTGCTTTATATGTAGTCTCTGGGGGTTTCCCTGAAGAGGCAACCCAGAGACCTCTGCTTTTGCGGATCTTCTAAATTTAGAAAGGTGGAGCTGTATACTTTAGAAATGGAACAGAGATATGAAAAGACATTTATCTTCCTTGAAATTCACTATTATGCTTAATAAAGTTTGTCCCACTCTTTATTGAAGTCTAGCTGTGTAGGTGCTCGTAGGATCCGGTAGGCTTAAATATTGCCTTTCAGCCATGGTGTATTTTATATACTCTTTGCTTGCATATGATTTTAAGAACTAACTTCGGAGTATTGGTTGATATAAAGGTGCAATGGGATGAGCCTTCATCTATTCTGCGTCCAGATAGGGTGTCTTCCTGGGAATTGGAGCCACTTGTTGCATCTAGCCCTCTAAGCTCTCTGCCTGCACAGAGGAACAAGCGTCCACGACCAGCTGTTTTGCCTTCCCCTTCCGCAGATGCAGCTGTACTCGGTAATATAACCCTTCTGAATGTTAATAAATCATTGTTGATTTAGATGGAATATTGTTGACATTATCTTCATATGTACTAGGTGGGTGGAAACCTACGGTTGAATCTTCTGCTTTTTCATATACCGAGCCGCAGCGGGGAAGGGACCTATATTCTTCACCAAAGTTCAGTACTGCTGCTTCAAATTCACTTGGTTTTAATGGGAATAATTCTCTTGGCGCTGTGTCCAGCAACGCCTACTGGTCTAATACCAGTATGGTGGAAAATGTTATGGACACTTCATCTCATGGAGCAAAAAGAGAACCCGTTGAAAAGAAACAGAACACTAGGAACGGATGCAGGCTCTTTGGGTTCCAGCTTCTTGGAAACTCCAATGTAGAGGAAGCTTCTCCAGTTTCAACACCAAAAATGGTGGGCGAGGATAGGCCAGTTCCACCTATAGATACAGCATTTGACCAGCATTTTGACCCATCGAACATTCACCGATCAGATATGCCTTCAGTAAGCTGTGATGCTGATAAATCATGCCTGATTTCCCCTCTAGAGTCTCAAAGCAGACAAATCCGCAGCTGCACAAAGGTATTTCAATCCATCAGCTTTTCATCACTTCGCCCCATCTCTTCTAATTGCTCTGAAGCAGTTCTGGTTGAAGGGGTTTTAACTGTATGGAATATATTTTTTTATAAGCAGTATTTCATTATGTATGAAATTAACAAGGGAAGGTTACTTATATATTTTCTCAGGTTCAAATGCAAGGAATTGCTGTTGGGAGGGCCGTAGATTTAACACGGTTCAATCAATATGATGATCTACTTAGGAAACTGGAGGAGATGTTTGACATAGAGGGTGAGCTTTGTGGCTCGGTAAAGAAATGGAAGGTTGTTTACACCGATGATGAAGATGATATGATGATGGTTGGAGATGATCCTTGGAAGTAAGTATTTTGAACCCCCATCCCCAAACACACCCAAATTCATGATTATCTCAAAATCTTTTTTTGCCTGTTTAATATTAATATGGAACAAATCAAATGCTATCACCGATCTTGCGTTCATCTCGATTTAGTTGAATATTGAGTGTGGTTTTGTTGAAGTAGCTGTACTTTTGAAGGCTTGAGCATGATAAAATGAGACTTAGTGATAAGGAACCACTAGAAAGGAAAGGATTACTTTATTGATCAAATACTTCAAGACAAGAACACTTGTTTGAGATTTGAATCATTCCACAAGCAAGTTCGATCATGTCAAGCTTGAATAATTCTAAATATGCCATCTAAACTATATAGAACTGCAAAGAAACTTAGCCTTTGGCTAAAAGAAAGCACAAATGCTCTTTTTACTACATCTTCTGGTCTCTTTTATAAACATAGCATACATGACTTTATATAACCTCAAAATGAAAATTCAAGACCATGAGACATTTCAAGAGTTGGAACCTTTATACTTTGTGCGACTATGTAAATGTAAGCTTAAAGTAAATAAAAGTTTTAAAATGCATTAAAGAAACACCGTAATTCTAGATTATCATCCACTCAAAATTTGTAAGCATTCATTCTTCTTTAATGCGGTATGAATTGCAACATCTTGTGACAATTTGAATAACATCTTCTTAACATCTCCCTTGGAGTTTATGTTGCATGATTGATACTTTGGTTCATTAGGTTGTCTAAAATTTGGGTTTGCCTTTCCTAAATGATTGCAGCGAGTTCTGCAGCATGGTAAGGAAGATATTCATCTACACGACAGAAGAAGTGAAGAGACTGTCGCCCAAGATAAAACTCCCACTCAGTGGAGAGATGAAGCTCAGCAAGCCAGATTCTGATATGGTTGCCAACCATACGGAGGATCAATCGTCCATCAGCGGATCAGATTGCTGATGGAGACGTATCCTTTGTCATATGGTTGTTGGCAGAGGAGAAAGAAAATGTGGAATGTTCACCAGAGGAGTGGGAAAGTGGAAGAAGAAATGGTTTATATTGTGGTAAGATTTTATCGGTAGGTATCGTTTGTGCATGGGTTGGCTGCTTTCTTTTGACTGCCAGTGGAGTGGGATCTGGAACGAAGTGTTGTTATATTTGCACTTAGAAGTACCAAAGATTCCGGCAACGAAAAGCTAGCTGCAGGTGCTGCTACATATATGAGGGGTGGGCTGGTAACTGGTGAAGGCTTTCTAAGCTTATCAAAAGAGTGAGGAAATGAATATGTTAATTGGGTTGTTTGGACTTGGAAATGAAATATGGGTTAGAAGAAAATACTGACCCAGTGTTTTAAGATGTTGAAATTAATATTTTTACGTAATAAGGTTCAGTTCAGTTCGGTTATTTTTCGGGGCTTTTCTGTCCCCTGATTATAAAACCGTGCAAGTCAGGTCCAGCTTGCCTTTTTGTACATATGAATTAGGATGCTGTGTTTTTTCACCATCTTGATTGCAGGAGTCTCTTTTTGTATGGGTTGTCAATGACAATTAGGGAGGAAGAAGCCCAAACATCTTCCACCCTTCTA

mRNA sequence

GGCTGTCTCGCTGACAGCGTGACTACGCTAAGTGTCAGGCATTTATTGATCTATCAGACCGCCTCTACCTCATAGATACTATTTGCTGTTGTTCTTGGTTGGTAATAAATATCTTTAAAGGAGTTAATCCTGGTTATAATTGTGTTCAGCTTTATCCCATATGTTCTTCGTAGGCAGTAAATCATTCAATTAGATACTTGTGATTTTTTTGTTTAACACATCCACCACCGCTTTTGCAGGTCGGCCCTTAGGTTGATTGGCACATAAATATCTCTCCGATATTATCATGTCTTTTTCAGCTGTCTCAAGTCTTCCCCCAGGAGGACCCACTTCAGGGCCCTCTTCAGATGCATTGTATAGGGAATTATGGCATGCCTGTGCTGGACCGCTTGTCACCCTTCCTCGCCAAGATGAACGAGTATACTACTTTCCACAGGGTCACATGGAACAGCTGGAAGCATCAATGCATCAAGGATTAGAGCAACAAATGCCTTCGTTCAACCTACCATCAAAAATACTTTGTAAAGTTGTCAATGTTGTTCTTCGGGCGGAACCTGACACAGATGAAGTGTATGCTCAGATAACTCTGTTACCGGAAAGCAATCAAAGTGAAGTAACAAGCCCAGATCCTGCCCTTCCTGAGCCTACAAGATGTAATGTCCACTCATTTTGCAAGACGCTCACTGCTTCTGACACTAGCACTCATGGTGGCTTCTCTGTTCTTAGGAGGCATGCGGATGACTGCCTTCCACCTCTGGATATGTCTCAGCAGCCACCGTGGCAAGAATTGGTTGCGAGTGACTTACATGGGAATCAAACAAGCAGGTCTACATTTCTTGTGAGTCTAAACAAGTACCTTGAAGCTCAAAACCATAAACTCTCTGTTGGGATGAGGTTCAAGATGAGGTTTGAAGGCGAGGAGGTTCCTGAAAGAAGTTTTAGTGGAACAATTGTTGGTCTTGGAGATAATGCATCGCCTGGATGGGCTAATTCTGACTGGCGATCTCTAAAGGTGCAATGGGATGAGCCTTCATCTATTCTGCGTCCAGATAGGGTGTCTTCCTGGGAATTGGAGCCACTTGTTGCATCTAGCCCTCTAAGCTCTCTGCCTGCACAGAGGAACAAGCGTCCACGACCAGCTGTTTTGCCTTCCCCTTCCGCAGATGCAGCTGTACTCGGTGGGTGGAAACCTACGGTTGAATCTTCTGCTTTTTCATATACCGAGCCGCAGCGGGGAAGGGACCTATATTCTTCACCAAAGTTCAGTACTGCTGCTTCAAATTCACTTGGTTTTAATGGGAATAATTCTCTTGGCGCTGTGTCCAGCAACGCCTACTGGTCTAATACCAGTATGGTGGAAAATGTTATGGACACTTCATCTCATGGAGCAAAAAGAGAACCCGTTGAAAAGAAACAGAACACTAGGAACGGATGCAGGCTCTTTGGGTTCCAGCTTCTTGGAAACTCCAATGTAGAGGAAGCTTCTCCAGTTTCAACACCAAAAATGGTGGGCGAGGATAGGCCAGTTCCACCTATAGATACAGCATTTGACCAGCATTTTGACCCATCGAACATTCACCGATCAGATATGCCTTCAGTAAGCTGTGATGCTGATAAATCATGCCTGATTTCCCCTCTAGAGTCTCAAAGCAGACAAATCCGCAGCTGCACAAAGGTTCAAATGCAAGGAATTGCTGTTGGGAGGGCCGTAGATTTAACACGGTTCAATCAATATGATGATCTACTTAGGAAACTGGAGGAGATGTTTGACATAGAGGGTGAGCTTTGTGGCTCGGTAAAGAAATGGAAGGTTGTTTACACCGATGATGAAGATGATATGATGATGATATTCATCTACACGACAGAAGAAGTGAAGAGACTGTCGCCCAAGATAAAACTCCCACTCAGTGGAGAGATGAAGCTCAGCAAGCCAGATTCTGATATGGTTGCCAACCATACGGAGGATCAATCGTTCAGTTCAGTTCGGTTATTTTTCGGGGCTTTTCTGTCCCCTGATTATAAAACCGTGCAAGTCAGGAGTCTCTTTTTGTATGGGTTGTCAATGACAATTAGGGAGGAAGAAGCCCAAACATCTTCCACCCTTCTA

Coding sequence (CDS)

ATGTCTTTTTCAGCTGTCTCAAGTCTTCCCCCAGGAGGACCCACTTCAGGGCCCTCTTCAGATGCATTGTATAGGGAATTATGGCATGCCTGTGCTGGACCGCTTGTCACCCTTCCTCGCCAAGATGAACGAGTATACTACTTTCCACAGGGTCACATGGAACAGCTGGAAGCATCAATGCATCAAGGATTAGAGCAACAAATGCCTTCGTTCAACCTACCATCAAAAATACTTTGTAAAGTTGTCAATGTTGTTCTTCGGGCGGAACCTGACACAGATGAAGTGTATGCTCAGATAACTCTGTTACCGGAAAGCAATCAAAGTGAAGTAACAAGCCCAGATCCTGCCCTTCCTGAGCCTACAAGATGTAATGTCCACTCATTTTGCAAGACGCTCACTGCTTCTGACACTAGCACTCATGGTGGCTTCTCTGTTCTTAGGAGGCATGCGGATGACTGCCTTCCACCTCTGGATATGTCTCAGCAGCCACCGTGGCAAGAATTGGTTGCGAGTGACTTACATGGGAATCAAACAAGCAGGTCTACATTTCTTGTGAGTCTAAACAAGTACCTTGAAGCTCAAAACCATAAACTCTCTGTTGGGATGAGGTTCAAGATGAGGTTTGAAGGCGAGGAGGTTCCTGAAAGAAGTTTTAGTGGAACAATTGTTGGTCTTGGAGATAATGCATCGCCTGGATGGGCTAATTCTGACTGGCGATCTCTAAAGGTGCAATGGGATGAGCCTTCATCTATTCTGCGTCCAGATAGGGTGTCTTCCTGGGAATTGGAGCCACTTGTTGCATCTAGCCCTCTAAGCTCTCTGCCTGCACAGAGGAACAAGCGTCCACGACCAGCTGTTTTGCCTTCCCCTTCCGCAGATGCAGCTGTACTCGGTGGGTGGAAACCTACGGTTGAATCTTCTGCTTTTTCATATACCGAGCCGCAGCGGGGAAGGGACCTATATTCTTCACCAAAGTTCAGTACTGCTGCTTCAAATTCACTTGGTTTTAATGGGAATAATTCTCTTGGCGCTGTGTCCAGCAACGCCTACTGGTCTAATACCAGTATGGTGGAAAATGTTATGGACACTTCATCTCATGGAGCAAAAAGAGAACCCGTTGAAAAGAAACAGAACACTAGGAACGGATGCAGGCTCTTTGGGTTCCAGCTTCTTGGAAACTCCAATGTAGAGGAAGCTTCTCCAGTTTCAACACCAAAAATGGTGGGCGAGGATAGGCCAGTTCCACCTATAGATACAGCATTTGACCAGCATTTTGACCCATCGAACATTCACCGATCAGATATGCCTTCAGTAAGCTGTGATGCTGATAAATCATGCCTGATTTCCCCTCTAGAGTCTCAAAGCAGACAAATCCGCAGCTGCACAAAGGTTCAAATGCAAGGAATTGCTGTTGGGAGGGCCGTAGATTTAACACGGTTCAATCAATATGATGATCTACTTAGGAAACTGGAGGAGATGTTTGACATAGAGGGTGAGCTTTGTGGCTCGGTAAAGAAATGGAAGGTTGTTTACACCGATGATGAAGATGATATGATGATGATATTCATCTACACGACAGAAGAAGTGAAGAGACTGTCGCCCAAGATAAAACTCCCACTCAGTGGAGAGATGAAGCTCAGCAAGCCAGATTCTGATATGGTTGCCAACCATACGGAGGATCAATCGTTCAGTTCAGTTCGGTTATTTTTCGGGGCTTTTCTGTCCCCTGATTATAAAACCGTGCAAGTCAGGAGTCTCTTTTTGTATGGGTTGTCAATGACAATTAGGGAGGAAGAAGCCCAAACATCTTCCACCCTTCTA

Protein sequence

MSFSAVSSLPPGGPTSGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSDWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAVLGGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSMVENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMMIFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQSFSSVRLFFGAFLSPDYKTVQVRSLFLYGLSMTIREEEAQTSSTLL
BLAST of Cp4.1LG08g13310 vs. Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-97
Identity = 217/411 (52.80%), Postives = 265/411 (64.48%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRS F+VS+N+YLEA+  KLSVGMRFKMRFEGEE PE+ FSGTIVG+ +N S  W +S
Sbjct: 267 RTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDS 326

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSS--LPAQRNKRPRPAVLPS----P 296
           +WRSLKVQWDEPSS+ RP+RVS WELEPLVA+S  SS   P QRNKRPRP  LPS    P
Sbjct: 327 EWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPATGP 386

Query: 297 SADAAVLGGWKPTVESSAFSYTEPQRGRDLYSSPKFS-TAASNSLGFNGNNSLGAVSSNA 356
           S      G WK   ++ +             S P FS  A + + G  GN S G    +A
Sbjct: 387 SGPVTPDGVWKSPADTPS-------------SVPLFSPPAKAATFGHGGNKSFGVSIGSA 446

Query: 357 YWSNTSMVENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEA-SPVSTPKMV 416
           +W   +  ++  ++ +     E  EKKQ   N CRLFGF+L+ N NV+E  S  S    V
Sbjct: 447 FWPTNA--DSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAV 506

Query: 417 GEDRPVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQG 476
             D+PVP  +    Q  +P NI++SD+PS S D +KS L SP ESQSRQIRSCTKV MQG
Sbjct: 507 AVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQG 566

Query: 477 IAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM-------- 536
            AVGRA+DLTR   Y+DL +KLEEMFDI+GEL  S KKW+VVYTDDEDDMMM        
Sbjct: 567 SAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNE 626

Query: 537 -------IFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQSFS 565
                  IFIYT EEVK+LSPK KL ++  M+L K D++   N TE +S S
Sbjct: 627 FCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQL-KADAEENGN-TEGRSSS 660

BLAST of Cp4.1LG08g13310 vs. Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.3e-95
Identity = 209/399 (52.38%), Postives = 266/399 (66.67%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGD----NASPG 236
           +TSRS F+VS+NKYLEA+   LSVGMRFKMRFEG+E PER FSGTI+G+G     + SP 
Sbjct: 269 RTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSP- 328

Query: 237 WANSDWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSA 296
           WA+SDW+SLKVQWDEPS+I+RPDRVS WELEPL AS+P    P  RNKR RP   PS  A
Sbjct: 329 WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVA 388

Query: 297 DAAV-LGGWKPTVESS-AFSYTEPQRGRDLYSS-PKFSTAASNSLGFNGNNSLGAVSSNA 356
           +     G WKP  E++   S++EPQR R+++ S P    +AS+ + FN  N    +S+  
Sbjct: 389 ELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNEPSILSNQF 448

Query: 357 YWSNTSMVENVMDTSSHGAKREPVEKKQN-TRNGCRLFGFQLLGNSNVEEASPVSTPKMV 416
           YWS   M ++  D+ S    +  VE+KQ  T  GCRLFG ++  +S VEEA P +T   V
Sbjct: 449 YWS---MRDSKTDSFSASTNKTRVERKQEPTTMGCRLFGIEI--SSAVEEALPAATVSGV 508

Query: 417 GEDRPVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQG 476
           G D+ V  +D   DQ   PSN ++SD P  S +       SPLESQSRQ+RSCTKV MQG
Sbjct: 509 GYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSER------SPLESQSRQVRSCTKVIMQG 568

Query: 477 IAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM-------- 536
           +AVGRAVDLT+ N Y DL  KLEEMFDI+G+LC ++K+W+VVYTDDEDDMM+        
Sbjct: 569 MAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDE 628

Query: 537 -------IFIYTTEEVKRLSPKIKLPLSGE-MKLSKPDS 552
                  I+IY+ EE K L+PK KLP+ G+ +KLS  +S
Sbjct: 629 FCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNS 655

BLAST of Cp4.1LG08g13310 vs. Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.5e-93
Identity = 207/403 (51.36%), Postives = 265/403 (65.76%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TS+S F+VS NKYLEA+N K+SVGMRFKMRFEG+E PER FSGTI+G+G  ++  WANS
Sbjct: 271 RTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVGSMSTSPWANS 330

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPL-VASSPLSSLPAQRNKRPRPAVLPSPSAD-A 296
           DWRSLKVQWDEPS + RPDRVS WELEPL V++S  S  P  RNKR RP    S + +  
Sbjct: 331 DWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARPPASNSIAPELP 390

Query: 297 AVLGGWKPTVESS-AFSYTEPQRGRDLY-SSPKFSTAASNSLGFNGNNSLGAVSS-NAYW 356
            V G WK + ES+  FS++  QR ++LY SSP    + S ++GF+  N   A+S+ + YW
Sbjct: 391 PVFGLWKSSAESTQGFSFSGLQRTQELYPSSPNPIFSTSLNVGFSTKNEPSALSNKHFYW 450

Query: 357 SNTSMVENVMDTSSHGAKREPVEKKQNTRN-GCRLFGFQLLGNSNVEEASPVSTPKMVGE 416
               M E   ++ S    + P EKKQ   + GCRLFG ++  +S VE  SP++    VG+
Sbjct: 451 ---PMRETRANSYSASISKVPSEKKQEPSSAGCRLFGIEI--SSAVEATSPLAAVSGVGQ 510

Query: 417 DRPVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIA 476
           D+P   +D   DQ   PS+ ++SD P+ S +       SP E+QSRQ+RSCTKV MQG+A
Sbjct: 511 DQPAASVDAESDQLSQPSHANKSDAPAASSEP------SPHETQSRQVRSCTKVIMQGMA 570

Query: 477 VGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------- 536
           VGRAVDLTR + YDDL  KLEEMFDI+GEL  S+KKWKVVYTDDEDDMM+          
Sbjct: 571 VGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFC 630

Query: 537 -----IFIYTTEEVKRLSPKIKLPLSGEM-----KLSKPDSDM 554
                I+IYT EE K+L+PK KLP+ G+          P+SDM
Sbjct: 631 SMVKRIYIYTYEEAKQLTPKSKLPIIGDAIKPNPNKQSPESDM 662

BLAST of Cp4.1LG08g13310 vs. Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 5.5e-67
Identity = 137/230 (59.57%), Postives = 161/230 (70.00%), Query Frame = 1

Query: 22  ALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 81
           ALYRELWHACAGPLVT+PRQD+RV+YFPQGH+EQ+EAS +Q  EQQMP ++LPSK+LC+V
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRV 116

Query: 82  VNVVLRAEPDTDEVYAQITLLPESNQSE-VTSPDPALPEPTRCNVHSFCKTLTASDTSTH 141
           +NV L+AE DTDEVYAQITLLPE+NQ E     +  LP P R  VHSFCKTLTASDTSTH
Sbjct: 117 INVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTH 176

Query: 142 GGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGN-----------------QTSRSTF 201
           GGFSVLRRHAD+CLPPLDMS+QPP QELVA DLH N                 Q+  S F
Sbjct: 177 GGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVF 236

Query: 202 LVSLNK-------YLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLG 227
           + S          +L  +N +L VG+R  MR +G  VP    S   + LG
Sbjct: 237 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG-NVPSSVISSHSMHLG 285

BLAST of Cp4.1LG08g13310 vs. Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-58
Identity = 115/170 (67.65%), Postives = 130/170 (76.47%), Query Frame = 1

Query: 12  GGPTSGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF 71
           GG   G   DAL+ ELW ACAGPLVT+PR  E+V+YFPQGH+EQ+EAS +Q  EQ+M  +
Sbjct: 27  GGGGGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY 86

Query: 72  NLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTS------PDPALPEPTRCNV 131
           NLP KILC+V+NV L+AEPDTDEVYAQ+TLLPES Q E         P        R  V
Sbjct: 87  NLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRV 146

Query: 132 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHG 176
           HSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QELVA DLHG
Sbjct: 147 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHG 196

BLAST of Cp4.1LG08g13310 vs. TrEMBL
Match: A0A0B2S4R4_GLYSO (Auxin response factor OS=Glycine soja GN=glysoja_020771 PE=3 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 3.2e-215
Identity = 395/582 (67.87%), Postives = 452/582 (77.66%), Query Frame = 1

Query: 17  GPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSK 76
           G ++DALY+ELWHACAGPLVTLPR+ ERVYYFPQGHMEQLEASM+QGLEQQMPSFNLPSK
Sbjct: 7   GATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSK 66

Query: 77  ILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCKTLTASD 136
           ILCKVVNV LRAEP+TDEVYAQITLLPE++QSEVTSPD  LPE  RC VHSFCKTLTASD
Sbjct: 67  ILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTASD 126

Query: 137 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQ------------------- 196
           TSTHGGFSVLRRHADDCLPPLDM+QQPPWQELVA+DLHGN+                   
Sbjct: 127 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGTLFSVFYKPR 186

Query: 197 TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSD 256
           TSRS F+VS+NKYLEAQ+HKLSVGMRFKMRFEG+EVPER FSGTIVG+ DN S  WA+S+
Sbjct: 187 TSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSLVWADSE 246

Query: 257 WRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAVL 316
           WRSLKVQWDEPSSILRPDRVS WELEPLV++ P +S P+QRNKR RP +LPS   D+++ 
Sbjct: 247 WRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTNSQPSQRNKRSRPPILPSTMLDSSLQ 306

Query: 317 GGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSMV 376
           G WK  VES+ FSY + Q GRD+Y S  F++ A+  LGF GN S  A + + YWS  S +
Sbjct: 307 GVWKSPVESAPFSYRDHQHGRDVYPSTNFNSTATGFLGFGGNCS--ASNKSIYWS--SRI 366

Query: 377 ENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEAS--PVSTPKMVGEDRPVP 436
           EN  ++ S  A +E  EK+Q T NGCRLFG QL  NSN  E S   VS    VG+D  +P
Sbjct: 367 ENSTESFSPVAVKEFGEKRQGTANGCRLFGIQLHDNSNSNEESLPMVSLSGRVGDDGLLP 426

Query: 437 PIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAV 496
            +D   DQH +PSN++RSD PSVSCDA+KSCL SP ESQSRQIRSCTKV MQG+AVGRAV
Sbjct: 427 SLDAESDQHSEPSNVNRSDFPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAV 486

Query: 497 DLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM--------------- 556
           DLTRF+ Y+DLLRKLEEMFDI GELCGS K+W+VVYTD+EDDMMM               
Sbjct: 487 DLTRFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRK 546

Query: 557 IFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
           IFIYT EEVK+LSPKI LP+S E+K  K DS+ V N  +  S
Sbjct: 547 IFIYTAEEVKKLSPKIGLPISEEVKPCKMDSEAVVNPGDQSS 584

BLAST of Cp4.1LG08g13310 vs. TrEMBL
Match: A0A0A0KJ00_CUCSA (Auxin response factor OS=Cucumis sativus GN=Csa_5G077780 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 5.3e-194
Identity = 344/401 (85.79%), Postives = 364/401 (90.77%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS
Sbjct: 271 RTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 330

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAV 296
           +WRSLKVQWDEPSSILRPD+VS+WELEPLVAS+PLS+ P QRNKRPRP VLPS S DA V
Sbjct: 331 EWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLSTQPTQRNKRPRPTVLPSSSPDATV 390

Query: 297 LGGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSM 356
           LGGWKPTVESS FSY EPQRGRDLYSSPKFSTAASNSLGFN N+SLGAVSSN YW NT+ 
Sbjct: 391 LGGWKPTVESSTFSYAEPQRGRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNYWCNTNR 450

Query: 357 VENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPP 416
           VEN+MD SSHGA REPVEKKQN+RNGCRLFG QLLGNSNV+EASPVSTPKM GEDR VPP
Sbjct: 451 VENIMDPSSHGANREPVEKKQNSRNGCRLFGIQLLGNSNVDEASPVSTPKMGGEDRLVPP 510

Query: 417 IDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVD 476
           IDT F+QH +PSNIHRSD+PS+SCDADKSCLISPLESQSRQIRSCTKV MQGIAVGRAVD
Sbjct: 511 IDTDFEQHSEPSNIHRSDIPSISCDADKSCLISPLESQSRQIRSCTKVHMQGIAVGRAVD 570

Query: 477 LTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------------I 536
           LTRFNQYDDLLRKLEEMFDIEGELCGS+KKW+VVYTDDEDDMM+               I
Sbjct: 571 LTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKI 630

Query: 537 FIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
           FIYTTEEVKRLSPKIKLPL GE KLSKPDSD++ANHTEDQS
Sbjct: 631 FIYTTEEVKRLSPKIKLPLGGEAKLSKPDSDIIANHTEDQS 671

BLAST of Cp4.1LG08g13310 vs. TrEMBL
Match: A0A118K6Q9_CYNCS (Auxin response factor OS=Cynara cardunculus var. scolymus GN=Ccrd_010508 PE=3 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 3.7e-187
Identity = 359/575 (62.43%), Postives = 423/575 (73.57%), Query Frame = 1

Query: 11  PGGPTSGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPS 70
           PGGP SG   DA+Y+ELWHACAGPLV +PR+ ERVYYFPQGHMEQLEASMHQGL+QQ+PS
Sbjct: 10  PGGPQSGSLGDAIYKELWHACAGPLVNVPREGERVYYFPQGHMEQLEASMHQGLDQQLPS 69

Query: 71  FNLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCK 130
           F+LP+KILCKVVN+ LRAEP+TDEVYAQITLLP+ +Q+EVT PDP   EP  C VHSFCK
Sbjct: 70  FDLPAKILCKVVNIQLRAEPETDEVYAQITLLPDPDQNEVTIPDPPPTEPPSCTVHSFCK 129

Query: 131 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQTSRSTFLVSLNKY 190
           TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGN+             
Sbjct: 130 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNEW-------HFRHI 189

Query: 191 LEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSDWRSLKVQWDEPSS 250
             A+NHKL VGMRFKMRFEGEEVPER FSGTIVG+GD AS  W +S+WRSLKVQWDE SS
Sbjct: 190 FRARNHKLLVGMRFKMRFEGEEVPERRFSGTIVGVGDTASSKWLDSEWRSLKVQWDELSS 249

Query: 251 ILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAVLGGWK-PTVESSAF 310
           ILRPDRVS WELEPLVAS+  +S P QRNKR R +VLP+   D + LG WK P    SAF
Sbjct: 250 ILRPDRVSPWELEPLVASNSTNSPPLQRNKRAR-SVLPNSVPDISGLGMWKSPGDRPSAF 309

Query: 311 SYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNA-YWSNTSMVENVMDTSSHGA 370
            Y +PQRGRD+Y S   S+    SL ++ N SL   S+ + +WSN  + E + ++    A
Sbjct: 310 QYCDPQRGRDIYPSNNISSITGISLSYSENGSLPPASTTSMHWSN--LREAITESFEPLA 369

Query: 371 KREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPPIDTAFDQHFDPS 430
            +E  EK+Q+  NG RLFG +LL + NV+E SP+   + V E+RP+ P+DT  D   +PS
Sbjct: 370 SKESGEKRQS--NGYRLFGIELLEHPNVDETSPMVVSRTVAEERPLCPVDTESDWGSEPS 429

Query: 431 NIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVDLTRFNQYDDLLR 490
           N++RSD+PS SC+ +K C +   E  +RQIRSCTKV MQGIAVGRAVDLT+ N Y+DLLR
Sbjct: 430 NVNRSDIPSASCEPEK-CSMRSQEFHTRQIRSCTKVHMQGIAVGRAVDLTQLNCYEDLLR 489

Query: 491 KLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------------IFIYTTEEVKRLS 550
           KLE MF+IEGEL    KKW+VVYTD EDD+MM               IFIYTTEE KRLS
Sbjct: 490 KLENMFEIEGELHVVPKKWQVVYTDCEDDIMMVGDDPWHEFCSMVRKIFIYTTEEAKRLS 549

Query: 551 PKIKLPLSGEMKLSKPDSDMVAN---HTEDQSFSS 566
           PKIKLP + E+   K    +V N    TE+QS S+
Sbjct: 550 PKIKLPENDELIQGK----LVLNAQVSTEEQSSSN 567

BLAST of Cp4.1LG08g13310 vs. TrEMBL
Match: M5XJV3_PRUPE (Auxin response factor OS=Prunus persica GN=PRUPE_ppa002394mg PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.1e-143
Identity = 279/405 (68.89%), Postives = 319/405 (78.77%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRS FLVS+NKYLEA +HKLSVGMRFKMRFEGEEVPER FSGTIVG+ DN SPGWANS
Sbjct: 270 RTSRSEFLVSVNKYLEAHSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVCDNTSPGWANS 329

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAV 296
           +WRSLKVQWDEPSSILRPDRVS WELEPLVA++PL+S PA RNKR RP VLPSPS D + 
Sbjct: 330 EWRSLKVQWDEPSSILRPDRVSPWELEPLVATTPLNSQPALRNKRARPPVLPSPSPDLSA 389

Query: 297 LGGWKPTVES-SAFSYTEPQRGRDLYSSPKFSTAAS-NSLGFNGNNSLGAVSSNA-YWSN 356
           LG WK  VES SAFSY++PQRGRD+Y SPK+++A+  NSL F GNNSL AVS N+ +WSN
Sbjct: 390 LGEWKSQVESPSAFSYSDPQRGRDIYPSPKYNSASKVNSLCFTGNNSLAAVSGNSMFWSN 449

Query: 357 TSMVENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASP-VSTPKMVGEDR 416
              V+ V ++ S    ++  E++Q T NGCRLFG QLL NSNVEE+SP V     +G+ R
Sbjct: 450 --RVDGVTESFSPVTNKDCGERRQGTGNGCRLFGIQLLENSNVEESSPVVMVSGKLGDIR 509

Query: 417 PVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVG 476
           P+   D   DQH +PSN++RSD+PS SCDA+KSCL SP ESQSRQIRSCTKV MQGIAVG
Sbjct: 510 PISSFDAESDQHSEPSNVNRSDLPSGSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVG 569

Query: 477 RAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM------------ 536
           RAVDLTRF +Y DLL+KLEEMFDIEGELCGS KKW+VVYTDDEDDMMM            
Sbjct: 570 RAVDLTRFERYKDLLKKLEEMFDIEGELCGSTKKWQVVYTDDEDDMMMVGDDPWHEFCSM 629

Query: 537 ---IFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
              IFIYT EEVKRLSPKIKL L+ E+K  KPDS+   N TEDQS
Sbjct: 630 VRKIFIYTIEEVKRLSPKIKLTLNEEVKPGKPDSEAAVN-TEDQS 671

BLAST of Cp4.1LG08g13310 vs. TrEMBL
Match: V4SAY2_9ROSI (Auxin response factor OS=Citrus clementina GN=CICLE_v10000491mg PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 7.8e-137
Identity = 268/405 (66.17%), Postives = 314/405 (77.53%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRS F+VS+NKYLEA+ HKLSVGMRFKM FEGEEVPER FSGTIVG+GD  S  W +S
Sbjct: 274 RTSRSEFIVSVNKYLEAKRHKLSVGMRFKMTFEGEEVPERRFSGTIVGVGDCRSSVWQDS 333

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSL-PAQRNKRPRPAVLPSPSADAA 296
           +WRSLKVQWDEPSSILRP+RVSSWELEPLVA++  ++  PAQRNKR RP VLPSP+AD +
Sbjct: 334 EWRSLKVQWDEPSSILRPERVSSWELEPLVATTTTTNAQPAQRNKRSRPPVLPSPAADIS 393

Query: 297 VLGGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAAS-NSLGFNGNNSLGAVSSNA-YWSN 356
           VLG WK  VESSAFSY +  +GRDLY SPKFSTA   N  G +GN SL AVSSN+ YW N
Sbjct: 394 VLGMWKSHVESSAFSYCDSPQGRDLYPSPKFSTATKGNHFGLSGNKSLAAVSSNSMYWPN 453

Query: 357 TSMVENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPK-MVGEDR 416
            +  ENV ++ +    +E  EK+Q   N CRLFG QL+ NSNVEEASP  T    +G+DR
Sbjct: 454 RA--ENVTESFAPVVNKECSEKRQGNGNTCRLFGIQLVDNSNVEEASPAFTMSGAMGDDR 513

Query: 417 PVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVG 476
            +P +D   DQH +PSNI+RSD+PSVSCDA+KSCL SP ESQSRQIRSCTKV MQGIAVG
Sbjct: 514 AIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVG 573

Query: 477 RAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM------------ 536
           RAVDLTRF+ Y+DLL+KLEEMFDIEG+LCGS KKW+VVYTDDEDDMMM            
Sbjct: 574 RAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTDDEDDMMMVGDDPWHEFCSM 633

Query: 537 ---IFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
              IFIYT EEVK+LSPK+KLP + E+   KPD ++V N T+D+S
Sbjct: 634 VRKIFIYTAEEVKKLSPKVKLPGNEELNAGKPDVEVVVN-TDDRS 675

BLAST of Cp4.1LG08g13310 vs. TAIR10
Match: AT1G59750.1 (AT1G59750.1 auxin response factor 1)

HSP 1 Score: 359.0 bits (920), Expect = 5.8e-99
Identity = 217/411 (52.80%), Postives = 265/411 (64.48%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRS F+VS+N+YLEA+  KLSVGMRFKMRFEGEE PE+ FSGTIVG+ +N S  W +S
Sbjct: 267 RTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDS 326

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSS--LPAQRNKRPRPAVLPS----P 296
           +WRSLKVQWDEPSS+ RP+RVS WELEPLVA+S  SS   P QRNKRPRP  LPS    P
Sbjct: 327 EWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPATGP 386

Query: 297 SADAAVLGGWKPTVESSAFSYTEPQRGRDLYSSPKFS-TAASNSLGFNGNNSLGAVSSNA 356
           S      G WK   ++ +             S P FS  A + + G  GN S G    +A
Sbjct: 387 SGPVTPDGVWKSPADTPS-------------SVPLFSPPAKAATFGHGGNKSFGVSIGSA 446

Query: 357 YWSNTSMVENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEA-SPVSTPKMV 416
           +W   +  ++  ++ +     E  EKKQ   N CRLFGF+L+ N NV+E  S  S    V
Sbjct: 447 FWPTNA--DSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAV 506

Query: 417 GEDRPVPPIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQG 476
             D+PVP  +    Q  +P NI++SD+PS S D +KS L SP ESQSRQIRSCTKV MQG
Sbjct: 507 AVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQG 566

Query: 477 IAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM-------- 536
            AVGRA+DLTR   Y+DL +KLEEMFDI+GEL  S KKW+VVYTDDEDDMMM        
Sbjct: 567 SAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNE 626

Query: 537 -------IFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQSFS 565
                  IFIYT EEVK+LSPK KL ++  M+L K D++   N TE +S S
Sbjct: 627 FCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQL-KADAEENGN-TEGRSSS 660

BLAST of Cp4.1LG08g13310 vs. TAIR10
Match: AT5G62000.1 (AT5G62000.1 auxin response factor 2)

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-68
Identity = 137/230 (59.57%), Postives = 161/230 (70.00%), Query Frame = 1

Query: 22  ALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 81
           ALYRELWHACAGPLVT+PRQD+RV+YFPQGH+EQ+EAS +Q  EQQMP ++LPSK+LC+V
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRV 116

Query: 82  VNVVLRAEPDTDEVYAQITLLPESNQSE-VTSPDPALPEPTRCNVHSFCKTLTASDTSTH 141
           +NV L+AE DTDEVYAQITLLPE+NQ E     +  LP P R  VHSFCKTLTASDTSTH
Sbjct: 117 INVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTH 176

Query: 142 GGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGN-----------------QTSRSTF 201
           GGFSVLRRHAD+CLPPLDMS+QPP QELVA DLH N                 Q+  S F
Sbjct: 177 GGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVF 236

Query: 202 LVSLNK-------YLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLG 227
           + S          +L  +N +L VG+R  MR +G  VP    S   + LG
Sbjct: 237 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG-NVPSSVISSHSMHLG 285

BLAST of Cp4.1LG08g13310 vs. TAIR10
Match: AT2G46530.3 (AT2G46530.3 auxin response factor 11)

HSP 1 Score: 219.2 bits (557), Expect = 7.1e-57
Identity = 109/160 (68.12%), Postives = 127/160 (79.38%), Query Frame = 1

Query: 17  GPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGL-EQQMPSFNLPS 76
           G + D LY ELW ACAGPLV +PR  ERV+YFPQGHMEQL AS +QG+ +Q++P FNLP 
Sbjct: 33  GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPP 92

Query: 77  KILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCKTLTAS 136
           KILC+V++V L+AE +TDEVYAQITL PE +QSE TS DP L EP +  V SF K LTAS
Sbjct: 93  KILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTAS 152

Query: 137 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHG 176
           DTSTHGGFSVLR+HA +CLP LDM+Q  P QELVA DLHG
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHG 192

BLAST of Cp4.1LG08g13310 vs. TAIR10
Match: AT3G61830.1 (AT3G61830.1 auxin response factor 18)

HSP 1 Score: 212.2 bits (539), Expect = 8.7e-55
Identity = 105/165 (63.64%), Postives = 125/165 (75.76%), Query Frame = 1

Query: 12  GGPTSGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLE-QQMPS 71
           G  +S    D LY ELW  CAGPLV +PR  ERV+YFPQGHMEQL AS +QG+  +++P 
Sbjct: 11  GSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPV 70

Query: 72  FNLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCK 131
           F+LP KILC+V++V L+AE +TDEVYAQITL PE +QSE TS DP +  PT+   HSF K
Sbjct: 71  FDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVK 130

Query: 132 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHG 176
            LTASDTSTHGGFSVLR+HA +CLP LDM+Q  P QELV  DLHG
Sbjct: 131 ILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHG 175

BLAST of Cp4.1LG08g13310 vs. TAIR10
Match: AT4G23980.1 (AT4G23980.1 auxin response factor 9)

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-54
Identity = 122/230 (53.04%), Postives = 142/230 (61.74%), Query Frame = 1

Query: 23  LYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQ-GLEQQMPSFNLPSKILCKV 82
           LY ELW  CAGPLV +P+  ERVYYFPQGHMEQLEAS  Q  L    P F LP KILC V
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68

Query: 83  VNVVLRAEPDTDEVYAQITLLPESNQ-SEVTSPDPALPEPTRCNVHSFCKTLTASDTSTH 142
           +NV L+AE DTDEVYAQITL+P   +  E  SPDP+ PE  R  VHSF K LTASDTSTH
Sbjct: 69  MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128

Query: 143 GGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQ-----------------TSRSTF 202
           GGFSVLR+HA +CLPPLDM+QQ P QELVA D+HG Q                 T  STF
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188

Query: 203 LVSLN-------KYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLG 227
           + S          +L  +N +L VG+R +   +   +P    S   + LG
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVR-RANLQQSSMPSSVISSHSMHLG 237

BLAST of Cp4.1LG08g13310 vs. NCBI nr
Match: gi|734418539|gb|KHN39693.1| (Auxin response factor 1 [Glycine soja])

HSP 1 Score: 756.1 bits (1951), Expect = 4.6e-215
Identity = 395/582 (67.87%), Postives = 452/582 (77.66%), Query Frame = 1

Query: 17  GPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSK 76
           G ++DALY+ELWHACAGPLVTLPR+ ERVYYFPQGHMEQLEASM+QGLEQQMPSFNLPSK
Sbjct: 7   GATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSK 66

Query: 77  ILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCKTLTASD 136
           ILCKVVNV LRAEP+TDEVYAQITLLPE++QSEVTSPD  LPE  RC VHSFCKTLTASD
Sbjct: 67  ILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTASD 126

Query: 137 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQ------------------- 196
           TSTHGGFSVLRRHADDCLPPLDM+QQPPWQELVA+DLHGN+                   
Sbjct: 127 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGTLFSVFYKPR 186

Query: 197 TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSD 256
           TSRS F+VS+NKYLEAQ+HKLSVGMRFKMRFEG+EVPER FSGTIVG+ DN S  WA+S+
Sbjct: 187 TSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSLVWADSE 246

Query: 257 WRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAVL 316
           WRSLKVQWDEPSSILRPDRVS WELEPLV++ P +S P+QRNKR RP +LPS   D+++ 
Sbjct: 247 WRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTNSQPSQRNKRSRPPILPSTMLDSSLQ 306

Query: 317 GGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSMV 376
           G WK  VES+ FSY + Q GRD+Y S  F++ A+  LGF GN S  A + + YWS  S +
Sbjct: 307 GVWKSPVESAPFSYRDHQHGRDVYPSTNFNSTATGFLGFGGNCS--ASNKSIYWS--SRI 366

Query: 377 ENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEAS--PVSTPKMVGEDRPVP 436
           EN  ++ S  A +E  EK+Q T NGCRLFG QL  NSN  E S   VS    VG+D  +P
Sbjct: 367 ENSTESFSPVAVKEFGEKRQGTANGCRLFGIQLHDNSNSNEESLPMVSLSGRVGDDGLLP 426

Query: 437 PIDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAV 496
            +D   DQH +PSN++RSD PSVSCDA+KSCL SP ESQSRQIRSCTKV MQG+AVGRAV
Sbjct: 427 SLDAESDQHSEPSNVNRSDFPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAV 486

Query: 497 DLTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM--------------- 556
           DLTRF+ Y+DLLRKLEEMFDI GELCGS K+W+VVYTD+EDDMMM               
Sbjct: 487 DLTRFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRK 546

Query: 557 IFIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
           IFIYT EEVK+LSPKI LP+S E+K  K DS+ V N  +  S
Sbjct: 547 IFIYTAEEVKKLSPKIGLPISEEVKPCKMDSEAVVNPGDQSS 584

BLAST of Cp4.1LG08g13310 vs. NCBI nr
Match: gi|778698341|ref|XP_011654515.1| (PREDICTED: auxin response factor 1 [Cucumis sativus])

HSP 1 Score: 685.6 bits (1768), Expect = 7.6e-194
Identity = 344/401 (85.79%), Postives = 364/401 (90.77%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS
Sbjct: 271 RTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 330

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAV 296
           +WRSLKVQWDEPSSILRPD+VS+WELEPLVAS+PLS+ P QRNKRPRP VLPS S DA V
Sbjct: 331 EWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLSTQPTQRNKRPRPTVLPSSSPDATV 390

Query: 297 LGGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSM 356
           LGGWKPTVESS FSY EPQRGRDLYSSPKFSTAASNSLGFN N+SLGAVSSN YW NT+ 
Sbjct: 391 LGGWKPTVESSTFSYAEPQRGRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNYWCNTNR 450

Query: 357 VENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPP 416
           VEN+MD SSHGA REPVEKKQN+RNGCRLFG QLLGNSNV+EASPVSTPKM GEDR VPP
Sbjct: 451 VENIMDPSSHGANREPVEKKQNSRNGCRLFGIQLLGNSNVDEASPVSTPKMGGEDRLVPP 510

Query: 417 IDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVD 476
           IDT F+QH +PSNIHRSD+PS+SCDADKSCLISPLESQSRQIRSCTKV MQGIAVGRAVD
Sbjct: 511 IDTDFEQHSEPSNIHRSDIPSISCDADKSCLISPLESQSRQIRSCTKVHMQGIAVGRAVD 570

Query: 477 LTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------------I 536
           LTRFNQYDDLLRKLEEMFDIEGELCGS+KKW+VVYTDDEDDMM+               I
Sbjct: 571 LTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKI 630

Query: 537 FIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
           FIYTTEEVKRLSPKIKLPL GE KLSKPDSD++ANHTEDQS
Sbjct: 631 FIYTTEEVKRLSPKIKLPLGGEAKLSKPDSDIIANHTEDQS 671

BLAST of Cp4.1LG08g13310 vs. NCBI nr
Match: gi|659121309|ref|XP_008460595.1| (PREDICTED: auxin response factor 1 [Cucumis melo])

HSP 1 Score: 683.7 bits (1763), Expect = 2.9e-193
Identity = 345/401 (86.03%), Postives = 363/401 (90.52%), Query Frame = 1

Query: 177 QTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 236
           +TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS
Sbjct: 271 RTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANS 330

Query: 237 DWRSLKVQWDEPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAV 296
           +WRSLKVQWDEPSSILRPD+VS+WELEPLVAS+PLSS P QRNKRPRP VLPS S DA V
Sbjct: 331 EWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLSSQPTQRNKRPRPTVLPSSSPDATV 390

Query: 297 LGGWKPTVESSAFSYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSM 356
           LGGWKPTVESSAFSYTEPQR RDLYSSPKFSTAASNSLGFN N   GAVSSN YW NT+ 
Sbjct: 391 LGGWKPTVESSAFSYTEPQRARDLYSSPKFSTAASNSLGFNAN---GAVSSNTYWCNTNR 450

Query: 357 VENVMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPP 416
           VEN+MDTSSHGA REPVEKKQN+RNGCRLFG QLLGNSNV+EASPVSTPKMVGEDR V P
Sbjct: 451 VENIMDTSSHGANREPVEKKQNSRNGCRLFGIQLLGNSNVDEASPVSTPKMVGEDRLVSP 510

Query: 417 IDTAFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVD 476
           +D+ F+QH +PSNIHRSD+PS+SCDADKSCLISPLESQSRQIRSCTKV MQGIAVGRAVD
Sbjct: 511 VDSEFEQHSEPSNIHRSDIPSISCDADKSCLISPLESQSRQIRSCTKVHMQGIAVGRAVD 570

Query: 477 LTRFNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------------I 536
           LTRFNQYDDLLRKLEEMFDIEGELCGS+KKW+VVYTDDEDDMMM               I
Sbjct: 571 LTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYTDDEDDMMMVGDDPWNEFCSMVRKI 630

Query: 537 FIYTTEEVKRLSPKIKLPLSGEMKLSKPDSDMVANHTEDQS 563
           FIYTTEEVKRLSPKIKLPL GE KLSKPDSDM+ANHTEDQS
Sbjct: 631 FIYTTEEVKRLSPKIKLPLGGEAKLSKPDSDMIANHTEDQS 668

BLAST of Cp4.1LG08g13310 vs. NCBI nr
Match: gi|976927319|gb|KVI11085.1| (Aux/IAA-ARF-dimerization [Cynara cardunculus var. scolymus])

HSP 1 Score: 662.9 bits (1709), Expect = 5.3e-187
Identity = 359/575 (62.43%), Postives = 423/575 (73.57%), Query Frame = 1

Query: 11  PGGPTSGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPS 70
           PGGP SG   DA+Y+ELWHACAGPLV +PR+ ERVYYFPQGHMEQLEASMHQGL+QQ+PS
Sbjct: 10  PGGPQSGSLGDAIYKELWHACAGPLVNVPREGERVYYFPQGHMEQLEASMHQGLDQQLPS 69

Query: 71  FNLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPTRCNVHSFCK 130
           F+LP+KILCKVVN+ LRAEP+TDEVYAQITLLP+ +Q+EVT PDP   EP  C VHSFCK
Sbjct: 70  FDLPAKILCKVVNIQLRAEPETDEVYAQITLLPDPDQNEVTIPDPPPTEPPSCTVHSFCK 129

Query: 131 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQTSRSTFLVSLNKY 190
           TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGN+             
Sbjct: 130 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNEW-------HFRHI 189

Query: 191 LEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSDWRSLKVQWDEPSS 250
             A+NHKL VGMRFKMRFEGEEVPER FSGTIVG+GD AS  W +S+WRSLKVQWDE SS
Sbjct: 190 FRARNHKLLVGMRFKMRFEGEEVPERRFSGTIVGVGDTASSKWLDSEWRSLKVQWDELSS 249

Query: 251 ILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSADAAVLGGWK-PTVESSAF 310
           ILRPDRVS WELEPLVAS+  +S P QRNKR R +VLP+   D + LG WK P    SAF
Sbjct: 250 ILRPDRVSPWELEPLVASNSTNSPPLQRNKRAR-SVLPNSVPDISGLGMWKSPGDRPSAF 309

Query: 311 SYTEPQRGRDLYSSPKFSTAASNSLGFNGNNSLGAVSSNA-YWSNTSMVENVMDTSSHGA 370
            Y +PQRGRD+Y S   S+    SL ++ N SL   S+ + +WSN  + E + ++    A
Sbjct: 310 QYCDPQRGRDIYPSNNISSITGISLSYSENGSLPPASTTSMHWSN--LREAITESFEPLA 369

Query: 371 KREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPPIDTAFDQHFDPS 430
            +E  EK+Q+  NG RLFG +LL + NV+E SP+   + V E+RP+ P+DT  D   +PS
Sbjct: 370 SKESGEKRQS--NGYRLFGIELLEHPNVDETSPMVVSRTVAEERPLCPVDTESDWGSEPS 429

Query: 431 NIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVDLTRFNQYDDLLR 490
           N++RSD+PS SC+ +K C +   E  +RQIRSCTKV MQGIAVGRAVDLT+ N Y+DLLR
Sbjct: 430 NVNRSDIPSASCEPEK-CSMRSQEFHTRQIRSCTKVHMQGIAVGRAVDLTQLNCYEDLLR 489

Query: 491 KLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------------IFIYTTEEVKRLS 550
           KLE MF+IEGEL    KKW+VVYTD EDD+MM               IFIYTTEE KRLS
Sbjct: 490 KLENMFEIEGELHVVPKKWQVVYTDCEDDIMMVGDDPWHEFCSMVRKIFIYTTEEAKRLS 549

Query: 551 PKIKLPLSGEMKLSKPDSDMVAN---HTEDQSFSS 566
           PKIKLP + E+   K    +V N    TE+QS S+
Sbjct: 550 PKIKLPENDELIQGK----LVLNAQVSTEEQSSSN 567

BLAST of Cp4.1LG08g13310 vs. NCBI nr
Match: gi|695037952|ref|XP_009406474.1| (PREDICTED: auxin response factor 7-like isoform X2 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 568.5 bits (1464), Expect = 1.4e-158
Identity = 331/643 (51.48%), Postives = 407/643 (63.30%), Query Frame = 1

Query: 6   VSSLPPGGPT----SGPSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMH 65
           ++S PP   +    SG   D LY+ELW ACAG LVTLPR+ ERVYYFPQGHMEQLEAS +
Sbjct: 1   MASAPPNSSSARLGSGSYGDVLYQELWKACAGSLVTLPREKERVYYFPQGHMEQLEASTN 60

Query: 66  QGLEQQMPSFNLPSKILCKVVNVVLRAEPDTDEVYAQITLLPESNQSEVTSPDPALPEPT 125
           Q L+QQMP F+LPSKILC+VV+V LRAEPDTDEVYAQITL PE NQ EVTSPD  L EP 
Sbjct: 61  QELDQQMPLFDLPSKILCRVVHVELRAEPDTDEVYAQITLQPEVNQDEVTSPDSPLAEPE 120

Query: 126 RCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNQ---- 185
           RCNV SFCKTLTASDTSTHGGFSVLRRHAD+CLP LDMSQ PPWQELVA DLHGN+    
Sbjct: 121 RCNVRSFCKTLTASDTSTHGGFSVLRRHADECLPSLDMSQNPPWQELVAKDLHGNEWHFR 180

Query: 186 -------------TSRSTFLVS-------LNKYLEAQNHKLSVGMRFKMRFEGEEVP--- 245
                        T  S F+ S       +  +L  +N +L VG+R  MR +   +P   
Sbjct: 181 HIFRGQPRRHLLTTGWSVFVSSKKLVAGDVFNFLRGENDELRVGVRRLMR-QPNNMPSSV 240

Query: 246 ----------------------------ERSFSGTIVGLGDNASPGWANSDWRSLKVQWD 305
                                       +  FSGTIVG+  + +  WA S+WR+LKVQWD
Sbjct: 241 ISSHSMHLGVLATASHAIATGTLFSVFYKPRFSGTIVGV--DTTSQWAGSEWRTLKVQWD 300

Query: 306 EPSSILRPDRVSSWELEPLVASSPLSSLPAQRNKRPRPAVLPSPSAD-AAVLGGWKPTVE 365
           EPS I RPD VS WELEPL+A++P +  P QRNKR RP+  P+ S+D     G WK T E
Sbjct: 301 EPSCIRRPDTVSPWELEPLLAAAPPTFQPVQRNKRTRPSAAPAESSDLTPAFGLWKSTAE 360

Query: 366 SSA-FSYTEPQRGRDLY-----SSPKFSTAASNSLGFNGNNSLGAVSSNAYWSNTSMVEN 425
           S+  FS++  Q G++L      +S   S +   S+ FNGNN   A++   YW      E 
Sbjct: 361 STQNFSFSGLQGGKELCAPSCPTSVFPSASKPESIEFNGNNGPSAINGAMYW--PFRTEP 420

Query: 426 VMDTSSHGAKREPVEKKQNTRNGCRLFGFQLLGNSNVEEASPVSTPKMVGEDRPVPPIDT 485
             D+      +E  EKKQ T  GC LFG QL+ +S V E SP++T   VGE++ V  +D 
Sbjct: 421 QTDSLMADINKEQSEKKQETSTGCWLFGIQLVESSAVGELSPLTTNSCVGEEQAVTSLDV 480

Query: 486 AFDQHFDPSNIHRSDMPSVSCDADKSCLISPLESQSRQIRSCTKVQMQGIAVGRAVDLTR 545
             DQ   PSNI+RSD  +VS + +KSCL S  E QSRQ+RSCTKV MQG+AVGRAVDLTR
Sbjct: 481 ESDQQSQPSNINRSDALAVSSEPEKSCLRSTQECQSRQLRSCTKVHMQGMAVGRAVDLTR 540

Query: 546 FNQYDDLLRKLEEMFDIEGELCGSVKKWKVVYTDDEDDMMM---------------IFIY 563
           F  YD+LL+KLEEMF+IEGEL G+ KKW+V+YTDDEDD+MM               I+IY
Sbjct: 541 FYGYDELLQKLEEMFNIEGELYGAAKKWEVIYTDDEDDIMMVGDDPWHEFCSMVRKIYIY 600

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ARFA_ARATH1.0e-9752.80Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2[more]
ARFI_ORYSJ1.3e-9552.38Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1[more]
ARFG_ORYSJ4.5e-9351.36Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1[more]
ARFB_ARATH5.5e-6759.57Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2[more]
ARFW_ORYSJ1.2e-5867.65Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0B2S4R4_GLYSO3.2e-21567.87Auxin response factor OS=Glycine soja GN=glysoja_020771 PE=3 SV=1[more]
A0A0A0KJ00_CUCSA5.3e-19485.79Auxin response factor OS=Cucumis sativus GN=Csa_5G077780 PE=3 SV=1[more]
A0A118K6Q9_CYNCS3.7e-18762.43Auxin response factor OS=Cynara cardunculus var. scolymus GN=Ccrd_010508 PE=3 SV... [more]
M5XJV3_PRUPE1.1e-14368.89Auxin response factor OS=Prunus persica GN=PRUPE_ppa002394mg PE=3 SV=1[more]
V4SAY2_9ROSI7.8e-13766.17Auxin response factor OS=Citrus clementina GN=CICLE_v10000491mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G59750.15.8e-9952.80 auxin response factor 1[more]
AT5G62000.13.1e-6859.57 auxin response factor 2[more]
AT2G46530.37.1e-5768.13 auxin response factor 11[more]
AT3G61830.18.7e-5563.64 auxin response factor 18[more]
AT4G23980.11.5e-5453.04 auxin response factor 9[more]
Match NameE-valueIdentityDescription
gi|734418539|gb|KHN39693.1|4.6e-21567.87Auxin response factor 1 [Glycine soja][more]
gi|778698341|ref|XP_011654515.1|7.6e-19485.79PREDICTED: auxin response factor 1 [Cucumis sativus][more]
gi|659121309|ref|XP_008460595.1|2.9e-19386.03PREDICTED: auxin response factor 1 [Cucumis melo][more]
gi|976927319|gb|KVI11085.1|5.3e-18762.43Aux/IAA-ARF-dimerization [Cynara cardunculus var. scolymus][more]
gi|695037952|ref|XP_009406474.1|1.4e-15851.48PREDICTED: auxin response factor 7-like isoform X2 [Musa acuminata subsp. malacc... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009725response to hormone
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR010525Auxin_resp
IPR000270PB1_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007154 cell communication
biological_process GO:0010150 leaf senescence
biological_process GO:0008150 biological_process
biological_process GO:0016246 RNA interference
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0006342 chromatin silencing
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0071310 cellular response to organic substance
biological_process GO:0006346 methylation-dependent chromatin silencing
biological_process GO:0006306 DNA methylation
biological_process GO:0007267 cell-cell signaling
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0044700 single organism signaling
biological_process GO:0009725 response to hormone
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0035194 posttranscriptional gene silencing by RNA
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g13310.1Cp4.1LG08g13310.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 459..551
score: 17
IPR010525Auxin response factorPFAMPF06507Auxin_respcoord: 177..242
score: 6.1
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 124..177
score: 4.1
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 117..178
score: 1.55
NoneNo IPR availablePANTHERPTHR31384FAMILY NOT NAMEDcoord: 1..568
score: 1.0E
NoneNo IPR availablePANTHERPTHR31384:SF28AUXIN RESPONSE FACTOR 1coord: 1..568
score: 1.0E
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 461..521
score: 2.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g13310CmaCh06G000030Cucurbita maxima (Rimu)cmacpeB846
Cp4.1LG08g13310CmoCh06G000030Cucurbita moschata (Rifu)cmocpeB794
Cp4.1LG08g13310Carg01309Silver-seed gourdcarcpeB0234
The following gene(s) are paralogous to this gene:

None