Cp4.1LG08g13080 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g13080
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Zinc finger family protein
Location	Cp4.1LG08 : 9473663 .. 9474478 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAGAGTAATAGTGAACGAGAGACTCATGATTTCATGAACGTTGAGTCTTTTTCTCAACTTCCCTTCATTCGTCCTGTGCCAAAAGAAAAGGGTATTAGGCTTTTCGGGATAGAATTCGGTAGTCGAAACGCTGCGGCTGCCACTGCCTCGTCGGTTGAGGATTCGGAGTCCGGTGACACGATTGTTGCATGCGAAGATGGTAAGGAGTATAATAACAATGACAACAACGAGAACAACGGCGGGGAAAGTAACCGGAGATTTGAGTGTCATTTTTGTTGTAGAAATTTCCCTACTTCTCAAGCCTTAGGAGGTCACCAAAACGCCCACAAAAGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCCAATGCCGCCACCATGGTCCATGGAATTGGACCCTTCTCCGATGCTGCTCATGTCTATGGCCTCATGAACTACCACCGCCTAGGCGCCGCTCCGTCCAGCTTACACTTTAACAATTACCCTTCTTGGAATAGAAATTCACCTTCCGCCGCCGCCACCGCCACCGCTACAAGATTTTACGGCAGCCCTGGTGGGTCATATTCTCCGGCAGCAACAGCGACGCCGATAAACGGGAGCCCATTGGCGATGTGGAGAATCTCTGCTGTTCAAAATAACGTATCGGAGCGGTCGTCGCTGCACCCGTTGCCACTTTTCTCCGGTGATGAGATGACGAAACGCGGCGGCGCCGCCGTGGGCGGCGGTGGTGCCGGCGGGTCTCTACAAACCAGATTTGTTTACGAGGCAAAAACGGCGGAGCAAGTGAGTTTGGATCTTCATCTGTAA

mRNA sequence

ATGGACAAGAGTAATAGTGAACGAGAGACTCATGATTTCATGAACGTTGAGTCTTTTTCTCAACTTCCCTTCATTCGTCCTGTGCCAAAAGAAAAGGGTATTAGGCTTTTCGGGATAGAATTCGGTAGTCGAAACGCTGCGGCTGCCACTGCCTCGTCGGTTGAGGATTCGGAGTCCGGTGACACGATTGTTGCATGCGAAGATGGTAAGGAGTATAATAACAATGACAACAACGAGAACAACGGCGGGGAAAGTAACCGGAGATTTGAGTGTCATTTTTGTTGTAGAAATTTCCCTACTTCTCAAGCCTTAGGAGGTCACCAAAACGCCCACAAAAGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCCAATGCCGCCACCATGGTCCATGGAATTGGACCCTTCTCCGATGCTGCTCATGTCTATGGCCTCATGAACTACCACCGCCTAGGCGCCGCTCCGTCCAGCTTACACTTTAACAATTACCCTTCTTGGAATAGAAATTCACCTTCCGCCGCCGCCACCGCCACCGCTACAAGATTTTACGGCAGCCCTGGTGGGTCATATTCTCCGGCAGCAACAGCGACGCCGATAAACGGGAGCCCATTGGCGATGTGGAGAATCTCTGCTGTTCAAAATAACGTATCGGAGCGGTCGTCGCTGCACCCGTTGCCACTTTTCTCCGGTGATGAGATGACGAAACGCGGCGGCGCCGCCGTGGGCGGCGGTGGTGCCGGCGGGTCTCTACAAACCAGATTTGTTTACGAGGCAAAAACGGCGGAGCAAGTGAGTTTGGATCTTCATCTGTAA

Coding sequence (CDS)

ATGGACAAGAGTAATAGTGAACGAGAGACTCATGATTTCATGAACGTTGAGTCTTTTTCTCAACTTCCCTTCATTCGTCCTGTGCCAAAAGAAAAGGGTATTAGGCTTTTCGGGATAGAATTCGGTAGTCGAAACGCTGCGGCTGCCACTGCCTCGTCGGTTGAGGATTCGGAGTCCGGTGACACGATTGTTGCATGCGAAGATGGTAAGGAGTATAATAACAATGACAACAACGAGAACAACGGCGGGGAAAGTAACCGGAGATTTGAGTGTCATTTTTGTTGTAGAAATTTCCCTACTTCTCAAGCCTTAGGAGGTCACCAAAACGCCCACAAAAGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCCAATGCCGCCACCATGGTCCATGGAATTGGACCCTTCTCCGATGCTGCTCATGTCTATGGCCTCATGAACTACCACCGCCTAGGCGCCGCTCCGTCCAGCTTACACTTTAACAATTACCCTTCTTGGAATAGAAATTCACCTTCCGCCGCCGCCACCGCCACCGCTACAAGATTTTACGGCAGCCCTGGTGGGTCATATTCTCCGGCAGCAACAGCGACGCCGATAAACGGGAGCCCATTGGCGATGTGGAGAATCTCTGCTGTTCAAAATAACGTATCGGAGCGGTCGTCGCTGCACCCGTTGCCACTTTTCTCCGGTGATGAGATGACGAAACGCGGCGGCGCCGCCGTGGGCGGCGGTGGTGCCGGCGGGTCTCTACAAACCAGATTTGTTTACGAGGCAAAAACGGCGGAGCAAGTGAGTTTGGATCTTCATCTGTAA

Protein sequence

MDKSNSERETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESGDTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSAAATATATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNNVSERSSLHPLPLFSGDEMTKRGGAAVGGGGAGGSLQTRFVYEAKTAEQVSLDLHL

Homology

[Close]

BLAST of Cp4.1LG08g13080 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-33
Identity = 107/247 (43.32%), Postives = 134/247 (54.25%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNV--ESFSQLPFIRPVP-KEKG--IRLFGIEFGSRNAAAATA---- 60
           MD++N  RETHDFMNV  ESFSQLPFIR  P KEK   IRLFG E    N+   +A    
Sbjct: 1   MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAAIIRLFGQELVGDNSDNLSAEPSD 60

Query: 61  --SSVEDSESGDTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQN 120
             ++ ++ ES + I   +  KE + + + +NN   +NRRFECH+C RNFPTSQALGGHQN
Sbjct: 61  HQTTTKNDESSENIK--DKDKEKDKDKDKDNN---NNRRFECHYCFRNFPTSQALGGHQN 120

Query: 121 AHKRERQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNR 180
           AHKRERQHAKR  + S     +H   P  D  H+YG +N H         H  +YPSW  
Sbjct: 121 AHKRERQHAKRGSMTS----YLHHHQP-HDPHHIYGFLNNH---------HHRHYPSWTT 180

Query: 181 NSPS-AAATATATRFYGSPGGSYSPAATATPINGSPLAMWRI--SAVQNNVSERSSLHPL 234
            + S        T  Y S      P++    INGSPL +WR+  S   N +    S  P 
Sbjct: 181 EARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGLWRVPPSTSTNTIQGVYSSSPA 228

[Close]

BLAST of Cp4.1LG08g13080 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.5e-28
Identity = 110/288 (38.19%), Postives = 143/288 (49.65%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKG---IRLFGIEFGSRNAAAATASSVEDS 60
           MD++  E ET DFMNVESFSQLPFIR  PK+K    IR+FG +F  R+ +  T    + +
Sbjct: 1   MDEATGETETQDFMNVESFSQLPFIRR-PKDKNPKPIRVFGKDFTGRDFSITTGQE-DYT 60

Query: 61  ESGDTIVACEDGKEYNNNDNN-ENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQ 120
           +   T    E+ +E    DN+ +NN    NRRFECH+C RNFPTSQALGGHQNAHKRERQ
Sbjct: 61  DPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQ 120

Query: 121 HAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSAAA 180
            AKR            G+  +           YH      +   + +YPSW  N P    
Sbjct: 121 LAKR------------GVSSYF----------YH---PDNNPYSYRHYPSWT-NGP---- 180

Query: 181 TATATRFYGSPGGSYSPAATAT-PINGSPLAMWRI-----------SAVQNNVSERSSLH 240
             TA R YG       P+   T P  GS L +WR+           +A  +N S  SS  
Sbjct: 181 -LTAARSYGGFSSGPKPSGYYTRPSYGSQLGLWRLPPRVQGVYNSNAAFTSNGSSSSSNS 240

Query: 241 PLPLFSGDEMTKRGGAAVGGGGAGGSLQT-RFVYEAKTAEQVSLDLHL 272
            LPL +  +   +  + VGG  A   + +  +       + VSLDLHL
Sbjct: 241 TLPLLTRSQ--TQLSSQVGGSAAQNRMSSYGYGLSPNVQDHVSLDLHL 253

[Close]

BLAST of Cp4.1LG08g13080 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-20
Identity = 76/174 (43.68%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 9   ETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESGDTIVACED 68
           +T+DFMNV SFS        PKE+ IRLFG EFG+         S E+SES D       
Sbjct: 2   KTYDFMNVNSFS--------PKERPIRLFGFEFGA---------SHEESESKD------- 61

Query: 69  GKEYNNNDNNEN-NGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNA 128
               N N+NNE+       +RF+CH+C RNFPTSQALGGHQNAHKRERQ  KR +L SNA
Sbjct: 62  ----NYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 121

Query: 129 ATMVHGIGPFSDAAHVYG--------LMNYHRLGAAPSSLHFNNYPSWNRNSPS 174
           A   H       A+ +Y          +N  RLG       +N+  S+NR+  S
Sbjct: 122 AAFFHRQQNHIAASRLYEDRYSLEAVQINDARLGLCRM---YNSSASFNRDRSS 144

[Close]

BLAST of Cp4.1LG08g13080 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1


Query: 80  NNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHL 124
           +  G  +R++EC +CCR F  SQALGGHQNAHK+ERQ  KRA +
Sbjct: 32  SGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of Cp4.1LG08g13080 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.5e-08
Identity = 38/102 (37.25%), Postives = 50/102 (49.02%), Query Frame = 1


Query: 31  EKGIRLFGIEF--GSRNAAAATASSVEDSESGDTIVACEDGKEYNNNDNNENNGGESNRR 90
           +K I+LFG E   GSR     TA SV  S +  ++                       +R
Sbjct: 20  DKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVM--------------------KR 79

Query: 91  FECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNAATM 131
            EC +C + F  SQALGGHQNAHK+ER   KR  LQ+  A++
Sbjct: 80  HECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASI 101

[Close]

BLAST of Cp4.1LG08g13080 vs. TrEMBL
Match: A0A0A0LGW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G799120 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 7.8e-105
Identity = 207/254 (81.50%), Postives = 218/254 (85.83%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESG 60
           MDKS SERETHDFMNVESFSQLPFIRP PKEKGIRLFGIEFGSRNAA  +ASS+E+SESG
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAATVSASSIEESESG 60

Query: 61  DTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKR 120
           +TI+ACED KE NNNDN  NNGGES+RRFECH+CCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  ETIIACEDAKE-NNNDN--NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSA-AATAT 180
           AHLQSNAA MVHGIGPFSDAAHVYGLMNY RLGA     H NNYPSWNRNSP+A AA A 
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HINNYPSWNRNSPAATAAAAA 180

Query: 181 ATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNN-------VSERSSLHPLPLFSGD 240
           ATRFYGS GG YS AATATPINGSPLAMWRISAVQN+         ERSS+HPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNLPSSFGGRERSSIHPLPLFSGD 240

Query: 241 EMTKRGGAAVGGGG 247
           +M K GG   GGGG
Sbjct: 241 DMMKGGG---GGGG 244

[Close]

BLAST of Cp4.1LG08g13080 vs. TrEMBL
Match: A0A061EWT6_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_024971 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.8e-62
Identity = 155/273 (56.78%), Postives = 186/273 (68.13%), Query Frame = 1


Query: 6   SERETHDFMNVESFSQLPFIRPVP-KEKGIRLFGIEFGSRNAAAATASSVEDSESGDTIV 65
           +ERETHDFMNVESFSQLPFIRP P KEKGIRLFG EFG  +A A+  S            
Sbjct: 4   NERETHDFMNVESFSQLPFIRPAPIKEKGIRLFGKEFGGDSATASNES------------ 63

Query: 66  ACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHLQ 125
              +  E N +   EN  G+++RRFECH+CCRNFPTSQALGGHQNAHKRERQHAKRAHLQ
Sbjct: 64  ---ESAENNEDTTKENENGDNSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQ 123

Query: 126 SNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSAAATATATRFY 185
           S    MVH     SD AH+YGL+NY RLG+AP+      YPSWN      + +++++RFY
Sbjct: 124 S---AMVH--NSLSD-AHIYGLVNY-RLGSAPTPA--MTYPSWNN-----SISSSSSRFY 183

Query: 186 GSPGGSYSPAATATPINGSPLAMWRISA-VQNNVS---ERSSLHPLPLFSGDEMTKRGGA 245
           G+ G    P     PINGSPL +WRI A VQ+N S   +RSS HPLPLF+GDE+  +   
Sbjct: 184 GNHGSFSQP-----PINGSPLGLWRIPATVQSNSSFNRDRSSSHPLPLFAGDEL--KPSQ 238

Query: 246 AVGGGGAGGSLQTRFVYEAKTAEQ--VSLDLHL 272
            VGGGG+  S Q+R+VYE+K+  Q  VSLDLHL
Sbjct: 244 VVGGGGS--SSQSRYVYESKSGVQDHVSLDLHL 238

[Close]

BLAST of Cp4.1LG08g13080 vs. TrEMBL
Match: M5VWR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018057mg PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-61
Identity = 168/294 (57.14%), Postives = 189/294 (64.29%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVP---KEKGIRLFGIEFGSRNAAAATASSVEDS 60
           MDK   E+ET DFMNVESFSQLPFIRP P   KEKGIRLFGIEFG+        +  EDS
Sbjct: 1   MDKV--EKETQDFMNVESFSQLPFIRPAPPVNKEKGIRLFGIEFGAD-------TPTEDS 60

Query: 61  ESGDTIVACEDG--KEYN------NNDNNENN--GGESNRRFECHFCCRNFPTSQALGGH 120
           ES D   ACED   KEYN       N NN++N  GGES+RRFECH+CCRNFPTSQALGGH
Sbjct: 61  ESLDYTNACEDAAAKEYNINTTTATNSNNKSNESGGESSRRFECHYCCRNFPTSQALGGH 120

Query: 121 QNAHKRERQHAKRAHLQSNAATMVHG--IGPFSDA-AHVYGLMNY--HRLGAAPSSLHFN 180
           QNAHKRERQHAKR HLQS    MVH    G   DA  HVYGLMNY   RLGA+P   H  
Sbjct: 121 QNAHKRERQHAKREHLQS---AMVHAGHHGLSHDAHHHVYGLMNYTTSRLGASPHH-HHT 180

Query: 181 NYPSWN-RNSPSAAATATATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNNVSERS 240
            YPSWN  +S S A     TRFYG+ GG+Y     + PINGSPLA+WRI AVQ   +   
Sbjct: 181 AYPSWNSSHSSSIAGAHQHTRFYGNSGGTY--GTQSAPINGSPLALWRIPAVQGTTNPSF 240

Query: 241 SL-HPLPLFSGDEMTKRGGAAVGGGGAGGSLQTRFVYEAKTA---EQVSLDLHL 272
           +    + LF+G E  K    A G GG GG  Q R+VY++  A   + VSLDLHL
Sbjct: 241 NRDRSMNLFAGGEEMK----AAGVGGTGG--QGRYVYDSSMASVQDHVSLDLHL 273

[Close]

BLAST of Cp4.1LG08g13080 vs. TrEMBL
Match: A0A151U3Q9_CAJCA (Zinc finger protein 6 OS=Cajanus cajan GN=KK1_006589 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.9e-61
Identity = 156/283 (55.12%), Postives = 185/283 (65.37%), Query Frame = 1


Query: 1   MDKSN----SERETHDFMNVESFSQLPFIRPVP--KEK-GIRLFGIEFGSRNAAA-ATAS 60
           MDK+     +ERETHDFMNV+SFSQLPFIRP P  KEK GIRLFGIEF   N  + +   
Sbjct: 1   MDKTTITTTTERETHDFMNVDSFSQLPFIRPAPPVKEKPGIRLFGIEFAGGNGDSDSVVV 60

Query: 61  SVEDSESGDTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHK 120
           S ++SESG+T          NNN+NN NN   ++RRFECH+CCRNFPTSQALGGHQNAHK
Sbjct: 61  SADESESGETTT--------NNNNNNNNN--LTSRRFECHYCCRNFPTSQALGGHQNAHK 120

Query: 121 RERQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSP 180
           RERQHAKRAHLQS   TMVHG   +SDA HVY LMNY R G+AP++     YP+W+  S 
Sbjct: 121 RERQHAKRAHLQS---TMVHG-STYSDAHHVYNLMNY-RFGSAPTTA--MPYPTWSNGSS 180

Query: 181 SAAATATATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNNVSERSSLHPLPLFSGD 240
           +  A   ATRFYG+   S+       PINGSPLA WRI     + S   SL   PLF+ +
Sbjct: 181 TTTAATNATRFYGTTAFSHHQNQQQQPINGSPLAFWRIPGNNPSFSHERSLP--PLFASE 240

Query: 241 EMTK-RGGAAVGGGGAGGSLQTRFVYEAKTA---EQVSLDLHL 272
           EMT  R    VG  G+    Q R+VY++K A   + VSLDLHL
Sbjct: 241 EMTNVRASQVVGASGS----QNRYVYDSKRASVHDHVSLDLHL 260

[Close]

BLAST of Cp4.1LG08g13080 vs. TrEMBL
Match: D9ZIS3_MALDO (C2H2L domain class transcription factor OS=Malus domestica GN=C2H2L13 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-59
Identity = 157/294 (53.40%), Postives = 182/294 (61.90%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVP---KEKGIRLFGIEFGSRNAAAATASSVEDS 60
           MDK   ERET DFMNVESFSQLPFIRP P   KEKGIRLFGIEFG       T ++ +DS
Sbjct: 1   MDKV--ERETQDFMNVESFSQLPFIRPAPPLNKEKGIRLFGIEFG-------TDTATDDS 60

Query: 61  ESGDTIVACEDGKEYN----------NNDNNENNGGESNRRFECHFCCRNFPTSQALGGH 120
           ES D   A ED K  N          N +NN  NG ES+RRFECH+CCRNFPTSQALGGH
Sbjct: 61  ESLDYTNASEDTKRNNINNNTTANNNNKNNNNENGSESSRRFECHYCCRNFPTSQALGGH 120

Query: 121 QNAHKRERQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSW 180
           QNAHKRERQHAKR HLQS    MVH  G   DA HVYGL+NY RLG+  S+LH   +PSW
Sbjct: 121 QNAHKRERQHAKREHLQS---AMVHAGGLSHDAHHVYGLLNYTRLGS--SALH---HPSW 180

Query: 181 NRNSPSAAATAT-------ATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNNVSER 240
           N  + S++ T+          RFYGS G +Y     + PINGSPLA+WRI AVQ      
Sbjct: 181 NITNSSSSITSAHHHQQHPHARFYGSSGSTY--GTQSAPINGSPLALWRIPAVQGANPSF 240

Query: 241 SSLHPLPLFSGDEMTKRGGAAVGGGGAGGSLQTRFVYEAKTA---EQVSLDLHL 272
           +    + L SG E     G    G G+ G  Q R++Y++  A   + VSLDLHL
Sbjct: 241 NRDRSMNLVSGGEEMMVSGF---GSGSSGGHQGRYLYDSSMASVQDHVSLDLHL 272

[Close]

BLAST of Cp4.1LG08g13080 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 107/247 (43.32%), Postives = 134/247 (54.25%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNV--ESFSQLPFIRPVP-KEKG--IRLFGIEFGSRNAAAATA---- 60
           MD++N  RETHDFMNV  ESFSQLPFIR  P KEK   IRLFG E    N+   +A    
Sbjct: 1   MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAAIIRLFGQELVGDNSDNLSAEPSD 60

Query: 61  --SSVEDSESGDTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQN 120
             ++ ++ ES + I   +  KE + + + +NN   +NRRFECH+C RNFPTSQALGGHQN
Sbjct: 61  HQTTTKNDESSENIK--DKDKEKDKDKDKDNN---NNRRFECHYCFRNFPTSQALGGHQN 120

Query: 121 AHKRERQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNR 180
           AHKRERQHAKR  + S     +H   P  D  H+YG +N H         H  +YPSW  
Sbjct: 121 AHKRERQHAKRGSMTS----YLHHHQP-HDPHHIYGFLNNH---------HHRHYPSWTT 180

Query: 181 NSPS-AAATATATRFYGSPGGSYSPAATATPINGSPLAMWRI--SAVQNNVSERSSLHPL 234
            + S        T  Y S      P++    INGSPL +WR+  S   N +    S  P 
Sbjct: 181 EARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGLWRVPPSTSTNTIQGVYSSSPA 228

[Close]

BLAST of Cp4.1LG08g13080 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-29
Identity = 110/288 (38.19%), Postives = 143/288 (49.65%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKG---IRLFGIEFGSRNAAAATASSVEDS 60
           MD++  E ET DFMNVESFSQLPFIR  PK+K    IR+FG +F  R+ +  T    + +
Sbjct: 1   MDEATGETETQDFMNVESFSQLPFIRR-PKDKNPKPIRVFGKDFTGRDFSITTGQE-DYT 60

Query: 61  ESGDTIVACEDGKEYNNNDNN-ENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQ 120
           +   T    E+ +E    DN+ +NN    NRRFECH+C RNFPTSQALGGHQNAHKRERQ
Sbjct: 61  DPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQ 120

Query: 121 HAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSAAA 180
            AKR            G+  +           YH      +   + +YPSW  N P    
Sbjct: 121 LAKR------------GVSSYF----------YH---PDNNPYSYRHYPSWT-NGP---- 180

Query: 181 TATATRFYGSPGGSYSPAATAT-PINGSPLAMWRI-----------SAVQNNVSERSSLH 240
             TA R YG       P+   T P  GS L +WR+           +A  +N S  SS  
Sbjct: 181 -LTAARSYGGFSSGPKPSGYYTRPSYGSQLGLWRLPPRVQGVYNSNAAFTSNGSSSSSNS 240

Query: 241 PLPLFSGDEMTKRGGAAVGGGGAGGSLQT-RFVYEAKTAEQVSLDLHL 272
            LPL +  +   +  + VGG  A   + +  +       + VSLDLHL
Sbjct: 241 TLPLLTRSQ--TQLSSQVGGSAAQNRMSSYGYGLSPNVQDHVSLDLHL 253

[Close]

BLAST of Cp4.1LG08g13080 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-22
Identity = 76/174 (43.68%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 9   ETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESGDTIVACED 68
           +T+DFMNV SFS        PKE+ IRLFG EFG+         S E+SES D       
Sbjct: 2   KTYDFMNVNSFS--------PKERPIRLFGFEFGA---------SHEESESKD------- 61

Query: 69  GKEYNNNDNNEN-NGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNA 128
               N N+NNE+       +RF+CH+C RNFPTSQALGGHQNAHKRERQ  KR +L SNA
Sbjct: 62  ----NYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 121

Query: 129 ATMVHGIGPFSDAAHVYG--------LMNYHRLGAAPSSLHFNNYPSWNRNSPS 174
           A   H       A+ +Y          +N  RLG       +N+  S+NR+  S
Sbjct: 122 AAFFHRQQNHIAASRLYEDRYSLEAVQINDARLGLCRM---YNSSASFNRDRSS 144

[Close]

BLAST of Cp4.1LG08g13080 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 8.5e-10
Identity = 45/108 (41.67%), Postives = 55/108 (50.93%), Query Frame = 1


Query: 33  GIRLFGIEFGSRNAAAATASSVEDSESGDTIVACEDGKEYNNNDNNENNGGESNRRFECH 92
           G  + G E  S  +     SSV   E G+   A   G+      +    GG   R++EC 
Sbjct: 19  GFSVDGEEDFSDQSVKTNLSSVSP-ERGE-FPAGSSGRSGGGVRSRGGGGGGGERKYECQ 78

Query: 93  FCCRNFPTSQALGGHQNAHKRERQHAKRAHLQS--NAATMVHGIGPFS 139
           +CCR F  SQALGGHQNAHK+ERQ  KRA LQ+  NAA      G  S
Sbjct: 79  YCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSAS 124

[Close]

BLAST of Cp4.1LG08g13080 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1


Query: 80  NNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKRAHL 124
           +  G  +R++EC +CCR F  SQALGGHQNAHK+ERQ  KRA +
Sbjct: 32  SGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of Cp4.1LG08g13080 vs. NCBI nr
Match: gi|659084688|ref|XP_008443018.1| (PREDICTED: zinc finger protein 8-like [Cucumis melo])

HSP 1 Score: 430.6 bits (1106), Expect = 2.0e-117
Identity = 232/284 (81.69%), Postives = 243/284 (85.56%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESG 60
           MDKS SERETHDFMNVESFSQLPFIRP PKEKGIRLFGIEFGSRNAA  +ASS+E+SESG
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAATVSASSIEESESG 60

Query: 61  DTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKR 120
           +T++ACED KE NNND N NNGGES+RRFECH+CCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  ETVIACEDAKE-NNNDGNNNNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSA-AATAT 180
           AHLQSNAA MVHGIGPFSDAAHVYGLMNY RLGA     H NNYPSWNRNSP+A AA A 
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HLNNYPSWNRNSPAATAAAAA 180

Query: 181 ATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQN-NV------SERSSLHPLPLFSGD 240
           ATRFYGS GG YS AATATPINGSPLAMWRISAVQN NV       ERSSLHPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNVPSSFGGRERSSLHPLPLFSGD 240

Query: 241 EMTK----RGGAAVGGGGAGGSLQT-RFVYEAKTAEQVSLDLHL 272
           EM K     GG AV  GG+GGS QT RFVYEAKTA+QVSLDLHL
Sbjct: 241 EMMKGAGGGGGTAVSAGGSGGSHQTGRFVYEAKTADQVSLDLHL 279

[Close]

BLAST of Cp4.1LG08g13080 vs. NCBI nr
Match: gi|778684700|ref|XP_004136728.2| (PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 8 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 2.9e-116
Identity = 230/284 (80.99%), Postives = 243/284 (85.56%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESG 60
           MDKS SERETHDFMNVESFSQLPFIRP PKEKGIRLFGIEFGSRNAA  +ASS+E+SESG
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAATVSASSIEESESG 60

Query: 61  DTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKR 120
           +TI+ACED KE NNNDN  NNGGES+RRFECH+CCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  ETIIACEDAKE-NNNDN--NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSA-AATAT 180
           AHLQSNAA MVHGIGPFSDAAHVYGLMNY RLGA     H NNYPSWNRNSP+A AA A 
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HINNYPSWNRNSPAATAAAAA 180

Query: 181 ATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNN-------VSERSSLHPLPLFSGD 240
           ATRFYGS GG YS AATATPINGSPLAMWRISAVQN+         ERSS+HPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNLPSSFGGRERSSIHPLPLFSGD 240

Query: 241 EMTKRGGA----AVGGGGAGGSLQT-RFVYEAKTAEQVSLDLHL 272
           +M K GG     AV GGG+GGS QT RFVYEAKTA+QVSLDLHL
Sbjct: 241 DMMKGGGGGGAPAVSGGGSGGSHQTGRFVYEAKTADQVSLDLHL 277

[Close]

BLAST of Cp4.1LG08g13080 vs. NCBI nr
Match: gi|700204143|gb|KGN59276.1| (hypothetical protein Csa_3G799120 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 1.1e-104
Identity = 207/254 (81.50%), Postives = 218/254 (85.83%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVPKEKGIRLFGIEFGSRNAAAATASSVEDSESG 60
           MDKS SERETHDFMNVESFSQLPFIRP PKEKGIRLFGIEFGSRNAA  +ASS+E+SESG
Sbjct: 1   MDKSTSERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSRNAATVSASSIEESESG 60

Query: 61  DTIVACEDGKEYNNNDNNENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRERQHAKR 120
           +TI+ACED KE NNNDN  NNGGES+RRFECH+CCRNFPTSQALGGHQNAHKRERQHAKR
Sbjct: 61  ETIIACEDAKE-NNNDN--NNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKR 120

Query: 121 AHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSA-AATAT 180
           AHLQSNAA MVHGIGPFSDAAHVYGLMNY RLGA     H NNYPSWNRNSP+A AA A 
Sbjct: 121 AHLQSNAAAMVHGIGPFSDAAHVYGLMNYQRLGAT----HINNYPSWNRNSPAATAAAAA 180

Query: 181 ATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNN-------VSERSSLHPLPLFSGD 240
           ATRFYGS GG YS AATATPINGSPLAMWRISAVQN+         ERSS+HPLPLFSGD
Sbjct: 181 ATRFYGSSGGQYSSAATATPINGSPLAMWRISAVQNSNLPSSFGGRERSSIHPLPLFSGD 240

Query: 241 EMTKRGGAAVGGGG 247
           +M K GG   GGGG
Sbjct: 241 DMMKGGG---GGGG 244

[Close]

BLAST of Cp4.1LG08g13080 vs. NCBI nr
Match: gi|1009166000|ref|XP_015901350.1| (PREDICTED: zinc finger protein 8 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 253.1 bits (645), Expect = 5.6e-64
Identity = 171/288 (59.38%), Postives = 200/288 (69.44%), Query Frame = 1


Query: 1   MDKSNSERETHDFMNVESFSQLPFIRPVP-KEKGIRLFGIEFGSRNAAAATASSVEDSES 60
           MDK+  ERETHDFMNVESFSQLPFIRP P KEK IRLFG EFG  + A  TA+  E+SES
Sbjct: 1   MDKT--ERETHDFMNVESFSQLPFIRPAPVKEKSIRLFGKEFGGGDVAGTTAT--EESES 60

Query: 61  GDTIVACEDGKEYN---NNDNNE--NNGGESNRRFECHFCCRNFPTSQALGGHQNAHKRE 120
            +T  A +D K+ N   NN++NE  NN GESNRRFECH+CCRNFPTSQALGGHQNAHKRE
Sbjct: 61  AETNNAYDDAKDNNSTSNNNSNESNNNNGESNRRFECHYCCRNFPTSQALGGHQNAHKRE 120

Query: 121 RQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPSA 180
           RQHAKRAHLQS    MVH     +D AHVYGLMNY RLG++P+      YPSW  ++ S 
Sbjct: 121 RQHAKRAHLQS---AMVH--SNLTD-AHVYGLMNY-RLGSSPA------YPSWTSSNNST 180

Query: 181 AATATAT--RFYGSPGGSYSPAATATPINGSPLAMWRI-SAVQN-----NVSERSSLHPL 240
           AATA A+  RFYG  G    P     PINGSPLA+WRI  AVQ+     N    S++HPL
Sbjct: 181 AATAIASGNRFYGGLGSYSHP----PPINGSPLALWRIPPAVQSNHPAFNRDRSSAVHPL 240

Query: 241 PLFSGDEMTKRGGAAVGGGGAGGSLQTRFV-YEAKTAEQ--VSLDLHL 272
           PLF+G+EM     + +GG  A    Q+R+V YE+K + Q  VSLDLHL
Sbjct: 241 PLFAGEEMK---ASHLGGSAAS---QSRYVTYESKPSVQDHVSLDLHL 261

[Close]

BLAST of Cp4.1LG08g13080 vs. NCBI nr
Match: gi|470135063|ref|XP_004303350.1| (PREDICTED: zinc finger protein 8 [Fragaria vesca subsp. vesca])

HSP 1 Score: 252.7 bits (644), Expect = 7.4e-64
Identity = 160/283 (56.54%), Postives = 186/283 (65.72%), Query Frame = 1


Query: 7   ERETHDFMNVESFSQLPFIRPVP---KEKGIRLFGIEFGSRNAAAATASSVEDSESGDTI 66
           ERET DFMNVESFSQLPFIRP P   KEKGIRLFGIEFG      A      DSES D  
Sbjct: 5   ERETQDFMNVESFSQLPFIRPAPPVNKEKGIRLFGIEFG------AGVDPNHDSESVDNN 64

Query: 67  VACEDGKEYNNNDN----------NENNGGESNRRFECHFCCRNFPTSQALGGHQNAHKR 126
           V+ E+GKE   N N          N  NG ES+RRFECH+CCRNFPTSQALGGHQNAHKR
Sbjct: 65  VS-ENGKEEEGNKNTNTTTNISKSNSENGSESSRRFECHYCCRNFPTSQALGGHQNAHKR 124

Query: 127 ERQHAKRAHLQSNAATMVHGIGPFSDAAHVYGLMNYHRLGAAPSSLHFNNYPSWNRNSPS 186
           ERQHAKR HLQS    MVHG     DAA VYGLMNY RLG+A    H   YP+WN N  S
Sbjct: 125 ERQHAKREHLQS---AMVHGGLVSHDAAQVYGLMNYSRLGSA----HHPTYPAWNTNY-S 184

Query: 187 AAATATATRFYGSPGGSYSPAATATPINGSPLAMWRISAVQNNVS-ERSSLHPL--PLFS 246
           ++ T T+ RFYG PGGSY       PINGSPL +WRI +   + + +RS ++PL  PLF+
Sbjct: 185 SSTTTTSPRFYGIPGGSY--GTQTAPINGSPLGLWRIPSANPSFNRDRSLMNPLVTPLFA 244

Query: 247 GDEMTKRGGAAVGGGGAGGSLQTRFVYEAKTAEQ--VSLDLHL 272
           G+E+       +GG    G+ Q+R+VYE+ + +Q  VSLDLHL
Sbjct: 245 GEELKP---VVIGG---SGNSQSRYVYESSSVQQDHVSLDLHL 264

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP8_ARATH	3.0e-33	43.32	Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1	[more]
GIS_ARATH	6.5e-28	38.19	Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1	[more]
GIS2_ARATH	1.0e-20	43.68	Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1	[more]
ZFP6_ARATH	2.6e-08	59.09	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	[more]
ZFP5_ARATH	7.5e-08	37.25	Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g13080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGW8_CUCSA	7.8e-105	81.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G799120 PE=4 SV=1	[more]
A0A061EWT6_THECC	2.8e-62	56.78	C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
M5VWR6_PRUPE	5.3e-61	57.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018057mg PE=4 SV=1	[more]
A0A151U3Q9_CAJCA	6.9e-61	55.12	Zinc finger protein 6 OS=Cajanus cajan GN=KK1_006589 PE=4 SV=1	[more]
D9ZIS3_MALDO	1.0e-59	53.40	C2H2L domain class transcription factor OS=Malus domestica GN=C2H2L13 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g13080 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41940.1	1.7e-34	43.32	zinc finger protein 8	[more]
AT3G58070.1	3.7e-29	38.19	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06650.1	5.7e-22	43.68	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G68360.1	8.5e-10	41.67	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	1.5e-09	59.09	zinc finger protein 6	[more]

BLAST of Cp4.1LG08g13080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084688\|ref\|XP_008443018.1\|	2.0e-117	81.69	PREDICTED: zinc finger protein 8-like [Cucumis melo]	[more]
gi\|778684700\|ref\|XP_004136728.2\|	2.9e-116	80.99	PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 8 [Cucumis sativus]	[more]
gi\|700204143\|gb\|KGN59276.1\|	1.1e-104	81.50	hypothetical protein Csa_3G799120 [Cucumis sativus]	[more]
gi\|1009166000\|ref\|XP_015901350.1\|	5.6e-64	59.38	PREDICTED: zinc finger protein 8 isoform X1 [Ziziphus jujuba]	[more]
gi\|470135063\|ref\|XP_004303350.1\|	7.4e-64	56.54	PREDICTED: zinc finger protein 8 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13080.1	Cp4.1LG08g13080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 91..111 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 89..116 score: 10
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 86..117 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g13080	Cucsa.242490	Cucumber (Gy14) v1	cgycpeB0649
Cp4.1LG08g13080	CmaCh14G004010	Cucurbita maxima (Rimu)	cmacpeB294
Cp4.1LG08g13080	CmaCh06G001170	Cucurbita maxima (Rimu)	cmacpeB852
Cp4.1LG08g13080	CmoCh06G001090	Cucurbita moschata (Rifu)	cmocpeB797
Cp4.1LG08g13080	CmoCh14G004030	Cucurbita moschata (Rifu)	cmocpeB255
Cp4.1LG08g13080	Cla017562	Watermelon (97103) v1	cpewmB837
Cp4.1LG08g13080	Csa3G799120	Cucumber (Chinese Long) v2	cpecuB856
Cp4.1LG08g13080	MELO3C009603	Melon (DHL92) v3.5.1	cpemeB801
Cp4.1LG08g13080	ClCG10G017710	Watermelon (Charleston Gray)	cpewcgB775
Cp4.1LG08g13080	CSPI03G36240	Wild cucumber (PI 183967)	cpecpiB859
Cp4.1LG08g13080	Lsi03G017560	Bottle gourd (USVL1VR-Ls)	cpelsiB712
Cp4.1LG08g13080	MELO3C009603.2	Melon (DHL92) v3.6.1	cpemedB942
Cp4.1LG08g13080	CsaV3_3G038590	Cucumber (Chinese Long) v3	cpecucB1054
Cp4.1LG08g13080	Bhi11G002094	Wax gourd	cpewgoB1082
Cp4.1LG08g13080	CsGy3G033710	Cucumber (Gy14) v2	cgybcpeB449
Cp4.1LG08g13080	Carg03585	Silver-seed gourd	carcpeB0356
Cp4.1LG08g13080	Carg01212	Silver-seed gourd	carcpeB0233

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g13080	Cp4.1LG03g00030	Cucurbita pepo (Zucchini)	cpecpeB484

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g13080	Wax gourd	cpewgoB1080