Cp4.1LG08g13010 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g13010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	phosphoserine aminotransferase
Location	Cp4.1LG08 : 9346512 .. 9347792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCACTACTTCCCCTACCTCCTTTCTTCTTCAGAATCCACATCGCCACCATGTCAAATCTTCCATTTCCACCTCTCACTTCAACACCCTCCCTCTCCCTTCTACCTCTCCAAAGCGCATCTCAATCTCCTGTGTAGCGTCCACCACCACCTCTGTCGGGATCCAAAATCCCTCTTCGTCGCAGATTCCTTCCGATGATCGGGTCTTCAACTTCGCCGCTGGCCCTGCCACCTTGCCGGAGACTGTCCTGAGAAAGGCTGAGTCTGAGCTCTTCAACTGGCGCGGATCTGGCATGAGCGTTATGGAAATGAGCCACAGAGGTAAAGATTTCACATCCATAATCCAGAAGGCCGAATCAGATCTCCGTAGCCTTCTGGATATTCCCTCCGATTACGCCGTTTTGTTCTTGCAGGGTGGCGCCACCACTCAATTCGCTGCGATCCCTTTGAATCTGTGTAAGCCTGACGACACCGTCGATTATGTCGTCACTGGTTCATGGAGCGACAAGGCCTTCAAAGAGGCTCAGAAATACTGTAAACCTAAGGTAATTTGGTCCGGCAAATCGGAAAAATACACCAAAATCCCTGCATTCGAGGATCTGGAACAAAGCCCTAATGCCAAATATATGCATATTTGTGCAAACGAGACCATCCATGGAGTTGAATTCAAGAACTACCCAAATCCGAAGAGCCTCTTGGTGGCTGATATGTCCTCCAATTTCTGCTCGAAGCCTGTGGACATATCCAAATTTGGGATAATTTATGCAGGAGCACAGAAGAATGTAGGGCCATCTGGGGTCACCATTGTAATCATCAGGAAGGATCTGATCGGTGGAGCACAAGAGATCACTCCAGTGATGTTGGACTACAAGATCCACCATGAAAACTCGTCGCTCTACAACACCCCACCTTGCTATGGCATCTACATGTGTGGATTGGTATTTGAAGATCTGCTGGCACAGGGGGGGCTAAAGGAGGTGGAGAAGAAGAACAAGAAGAAGGCCGAGATCCTTTACGAGGCAATCAACCAGAGCAACGGGTTCTACCGGTGCCCGGTCGAGCCGTCGGTGAGGTCATTGATGAATGTACCATTTACTCTAGAGAAGGCAGAACTGGAAGGCGAGTTTGTGAAGGAAGCAGCAAAAGAGAAGATGGTTCAGCTGAAGGGACATAGATCAGTGGGAGGAATGAGAGCTTCAATATACAATGCCATGCCATTGGCTGGAGTGGAGAAATTGGTTGCTTTCATGAAGGAATTCCAGGGAAGGCATGCTTGA

mRNA sequence

ATGGCGGCCACTACTTCCCCTACCTCCTTTCTTCTTCAGAATCCACATCGCCACCATGTCAAATCTTCCATTTCCACCTCTCACTTCAACACCCTCCCTCTCCCTTCTACCTCTCCAAAGCGCATCTCAATCTCCTGTGTAGCGTCCACCACCACCTCTGTCGGGATCCAAAATCCCTCTTCGTCGCAGATTCCTTCCGATGATCGGGTCTTCAACTTCGCCGCTGGCCCTGCCACCTTGCCGGAGACTGTCCTGAGAAAGGCTGAGTCTGAGCTCTTCAACTGGCGCGGATCTGGCATGAGCGTTATGGAAATGAGCCACAGAGGAGCACAGAAGAATGTAGGGCCATCTGGGGTCACCATTGTAATCATCAGGAAGGATCTGATCGGTGGAGCACAAGAGATCACTCCAGTGATGTTGGACTACAAGATCCACCATGAAAACTCGTCGCTCTACAACACCCCACCTTGCTATGGCATCTACATGTGTGGATTGGTATTTGAAGATCTGCTGGCACAGGGGGGGCTAAAGGAGGTGGAGAAGAAGAACAAGAAGAAGGCCGAGATCCTTTACGAGGCAATCAACCAGAGCAACGGGTTCTACCGGTGCCCGGTCGAGCCGTCGGTGAGGTCATTGATGAATGTACCATTTACTCTAGAGAAGGCAGAACTGGAAGGCGAGTTTGTGAAGGAAGCAGCAAAAGAGAAGATGGTTCAGCTGAAGGGACATAGATCAGTGGGAGGAATGAGAGCTTCAATATACAATGCCATGCCATTGGCTGGAGTGGAGAAATTGGTTGCTTTCATGAAGGAATTCCAGGGAAGGCATGCTTGA

Coding sequence (CDS)

ATGGCGGCCACTACTTCCCCTACCTCCTTTCTTCTTCAGAATCCACATCGCCACCATGTCAAATCTTCCATTTCCACCTCTCACTTCAACACCCTCCCTCTCCCTTCTACCTCTCCAAAGCGCATCTCAATCTCCTGTGTAGCGTCCACCACCACCTCTGTCGGGATCCAAAATCCCTCTTCGTCGCAGATTCCTTCCGATGATCGGGTCTTCAACTTCGCCGCTGGCCCTGCCACCTTGCCGGAGACTGTCCTGAGAAAGGCTGAGTCTGAGCTCTTCAACTGGCGCGGATCTGGCATGAGCGTTATGGAAATGAGCCACAGAGGAGCACAGAAGAATGTAGGGCCATCTGGGGTCACCATTGTAATCATCAGGAAGGATCTGATCGGTGGAGCACAAGAGATCACTCCAGTGATGTTGGACTACAAGATCCACCATGAAAACTCGTCGCTCTACAACACCCCACCTTGCTATGGCATCTACATGTGTGGATTGGTATTTGAAGATCTGCTGGCACAGGGGGGGCTAAAGGAGGTGGAGAAGAAGAACAAGAAGAAGGCCGAGATCCTTTACGAGGCAATCAACCAGAGCAACGGGTTCTACCGGTGCCCGGTCGAGCCGTCGGTGAGGTCATTGATGAATGTACCATTTACTCTAGAGAAGGCAGAACTGGAAGGCGAGTTTGTGAAGGAAGCAGCAAAAGAGAAGATGGTTCAGCTGAAGGGACATAGATCAGTGGGAGGAATGAGAGCTTCAATATACAATGCCATGCCATTGGCTGGAGTGGAGAAATTGGTTGCTTTCATGAAGGAATTCCAGGGAAGGCATGCTTGA

Protein sequence

MAATTSPTSFLLQNPHRHHVKSSISTSHFNTLPLPSTSPKRISISCVASTTTSVGIQNPSSSQIPSDDRVFNFAAGPATLPETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA

Homology

[Close]

BLAST of Cp4.1LG08g13010 vs. Swiss-Prot
Match: SERB2_ARATH (Phosphoserine aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=PSAT2 PE=1 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.2e-83
Identity = 154/197 (78.17%), Postives = 172/197 (87.31%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P+ VL    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIG A++ITPVML
Sbjct: 226 PDGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNARDITPVML 285

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIH ENSSLYNTPPC+GIYMCGLVF+DLL QGGLKEVEKKN++KAE+LY AI++S GF
Sbjct: 286 DYKIHDENSSLYNTPPCFGIYMCGLVFDDLLEQGGLKEVEKKNQRKAELLYNAIDESRGF 345

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEK+ELE EF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 346 FRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 405

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMK+FQ RHA
Sbjct: 406 GVEKLVAFMKDFQARHA 422

[Close]

BLAST of Cp4.1LG08g13010 vs. Swiss-Prot
Match: SERB1_ARATH (Phosphoserine aminotransferase 1, chloroplastic OS=Arabidopsis thaliana GN=PSAT1 PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 5.5e-83
Identity = 149/169 (88.17%), Postives = 161/169 (95.27%), Query Frame = 1


Query: 109 GAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYGIYMCGLVFE 168
           GAQKNVGPSGVTIVIIRKDLIG AQ+ITPVMLDYKIH ENSSLYNTPPC+GIYMCGLVFE
Sbjct: 262 GAQKNVGPSGVTIVIIRKDLIGNAQDITPVMLDYKIHDENSSLYNTPPCFGIYMCGLVFE 321

Query: 169 DLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTLEKAELEGEF 228
           DLL QGGLKEVEKKN++KA++LY AI +SNGF+RCPVE SVRSLMNVPFTLEK+ELE EF
Sbjct: 322 DLLEQGGLKEVEKKNQRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFTLEKSELEAEF 381

Query: 229 VKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
           +KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK+FQ +HA
Sbjct: 382 IKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430

[Close]

BLAST of Cp4.1LG08g13010 vs. Swiss-Prot
Match: SERC_SPIOL (Phosphoserine aminotransferase, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.0e-81
Identity = 145/171 (84.80%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 107 HRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYGIYMCGLV 166
           + GAQKNVGPSGVTIVI+R DLIG AQ++TPVMLDYKIH +N SLYNTPPCYGIYMCGLV
Sbjct: 260 YAGAQKNVGPSGVTIVIVRNDLIGNAQKMTPVMLDYKIHADNKSLYNTPPCYGIYMCGLV 319

Query: 167 FEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTLEKAELEG 226
           FEDLL QGGL EVEKKNK KA++LY+AI++SNGFY+CPVE SVRSLMNVPFTLEK+ELEG
Sbjct: 320 FEDLLNQGGLVEVEKKNKAKAQVLYDAIDESNGFYKCPVEKSVRSLMNVPFTLEKSELEG 379

Query: 227 EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
           +F+KEAAKEKMV LKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQ +HA
Sbjct: 380 DFIKEAAKEKMVALKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQAKHA 430

[Close]

BLAST of Cp4.1LG08g13010 vs. Swiss-Prot
Match: SERC_LARHH (Phosphoserine aminotransferase OS=Laribacter hongkongensis (strain HLHK9) GN=serC PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-51
Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 1


Query: 109 GAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYGIYMCGLVFE 168
           GAQKN+GP+G+T+VI+R+DL+G     TP M DYKIH +  S+YNTPP Y IYM GLVF+
Sbjct: 191 GAQKNIGPAGLTLVIVREDLLGQTLPGTPTMFDYKIHADADSMYNTPPTYAIYMAGLVFQ 250

Query: 169 DLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTLEKAELEGEF 228
            L   GG++ ++ +N++KA +LY  I+ S+GFYRCPV+   RS MNVPF L    LE  F
Sbjct: 251 WLKDNGGVRGIQMRNEEKAGLLYHTIDSSDGFYRCPVDVECRSRMNVPFRLRTEVLEKRF 310

Query: 229 VKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRH 277
           V EA    ++QLKGHRSVGG+RASIYNAMP  GV+ LVAFM EF  RH
Sbjct: 311 VDEADMAGLLQLKGHRSVGGVRASIYNAMPFEGVKALVAFMAEFARRH 358

[Close]

BLAST of Cp4.1LG08g13010 vs. Swiss-Prot
Match: SERC_VIBPA (Phosphoserine aminotransferase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=serC PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.8e-48
Identity = 96/171 (56.14%), Postives = 128/171 (74.85%), Query Frame = 1


Query: 107 HRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYGIYMCGLV 166
           + GAQKN+GPSG+ I I+R DL+G A+++ P +LDYK+  E  S++NTPP +  Y+ GLV
Sbjct: 195 YAGAQKNIGPSGIAIAIVRDDLLGMAKQVLPSILDYKVLAEKESMFNTPPTFAWYLSGLV 254

Query: 167 FEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTLEKAELEG 226
           F+ L AQGG+K +E  N++KA++LY+ I+QS+ FYR  V PS RSLMNVPF L K EL+ 
Sbjct: 255 FKWLKAQGGVKSIETVNREKAKLLYDYIDQSD-FYRNGVHPSNRSLMNVPFQLAKPELDA 314

Query: 227 EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
            F++ A  + +  LKGHR VGGMRASIYNAMPL GV+ LV FMKEF+  +A
Sbjct: 315 TFLELADAKGLKALKGHRVVGGMRASIYNAMPLEGVQALVDFMKEFEQNYA 364

[Close]

BLAST of Cp4.1LG08g13010 vs. TrEMBL
Match: A0A0A0L643_CUCSA (Phosphoserine aminotransferase OS=Cucumis sativus GN=Csa_3G002370 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.9e-86
Identity = 163/197 (82.74%), Postives = 177/197 (89.85%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P+ +L    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIGGAQ+ITPVML
Sbjct: 231 PKNLLVADMSSNFCSKPVDISKFGIIYAGAQKNVGPSGVTIVIIRKDLIGGAQDITPVML 290

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           D+KIHHEN+SLYNTPPCYGIYMCGLVFEDLL QGGLKEVEKKNKKKA+ILYEAI+QSNGF
Sbjct: 291 DFKIHHENNSLYNTPPCYGIYMCGLVFEDLLQQGGLKEVEKKNKKKADILYEAIDQSNGF 350

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 351 FRCPVERSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 410

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMK+FQ RHA
Sbjct: 411 GVEKLVAFMKDFQARHA 427

[Close]

BLAST of Cp4.1LG08g13010 vs. TrEMBL
Match: M4F853_BRARP (Phosphoserine aminotransferase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-82
Identity = 157/197 (79.70%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P  VL    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIG AQ++TPVML
Sbjct: 134 PNGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNAQDVTPVML 193

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIH ENSSLYNTPPC+GIYMCGLVF+DLLAQGGL EVEKKN++KA+ILY+AI++S GF
Sbjct: 194 DYKIHDENSSLYNTPPCFGIYMCGLVFDDLLAQGGLNEVEKKNQRKAKILYDAIDESRGF 253

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 254 FRCPVEKSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 313

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMKEFQ RHA
Sbjct: 314 GVEKLVAFMKEFQARHA 330

[Close]

BLAST of Cp4.1LG08g13010 vs. TrEMBL
Match: A0A078GXX6_BRANA (Phosphoserine aminotransferase OS=Brassica napus GN=BnaA09g09210D PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-82
Identity = 157/197 (79.70%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P  VL    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIG AQ++TPVML
Sbjct: 209 PNGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNAQDVTPVML 268

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIH ENSSLYNTPPC+GIYMCGLVF+DLLAQGGL EVEKKN++KA+ILY+AI++S GF
Sbjct: 269 DYKIHDENSSLYNTPPCFGIYMCGLVFDDLLAQGGLNEVEKKNQRKAKILYDAIDESRGF 328

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 329 FRCPVEKSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 388

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMKEFQ RHA
Sbjct: 389 GVEKLVAFMKEFQARHA 405

[Close]

BLAST of Cp4.1LG08g13010 vs. TrEMBL
Match: F6H8F3_VITVI (Phosphoserine aminotransferase OS=Vitis vinifera GN=VIT_00s2579g00010 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82
Identity = 153/178 (85.96%), Postives = 166/178 (93.26%), Query Frame = 1


Query: 100 MSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYG 159
           +S   + + GAQKNVGPSGVTIVI+RKDLIG AQEITP+M DYKIH EN+SLYNTPPCYG
Sbjct: 250 VSKFGLIYAGAQKNVGPSGVTIVIVRKDLIGNAQEITPIMFDYKIHVENNSLYNTPPCYG 309

Query: 160 IYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTL 219
           IYMCGLVFEDLLAQGGLKEVEKKN KKA+ILY+AI++SNGFYRCPVE SVRSLMNVPFTL
Sbjct: 310 IYMCGLVFEDLLAQGGLKEVEKKNIKKAQILYDAIDESNGFYRCPVEKSVRSLMNVPFTL 369

Query: 220 EKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
           EK++LE EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK+FQ RHA
Sbjct: 370 EKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 427

[Close]

BLAST of Cp4.1LG08g13010 vs. TrEMBL
Match: F6I7S4_VITVI (Phosphoserine aminotransferase OS=Vitis vinifera GN=VIT_00s2607g00010 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82
Identity = 153/178 (85.96%), Postives = 166/178 (93.26%), Query Frame = 1


Query: 100 MSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYG 159
           +S   + + GAQKNVGPSGVTIVI+RKDLIG AQEITP+M DYKIH EN+SLYNTPPCYG
Sbjct: 167 VSKFGLIYAGAQKNVGPSGVTIVIVRKDLIGNAQEITPIMFDYKIHVENNSLYNTPPCYG 226

Query: 160 IYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTL 219
           IYMCGLVFEDLLAQGGLKEVEKKN KKA+ILY+AI++SNGFYRCPVE SVRSLMNVPFTL
Sbjct: 227 IYMCGLVFEDLLAQGGLKEVEKKNIKKAQILYDAIDESNGFYRCPVEKSVRSLMNVPFTL 286

Query: 220 EKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
           EK++LE EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK+FQ RHA
Sbjct: 287 EKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 344

[Close]

BLAST of Cp4.1LG08g13010 vs. TAIR10
Match: AT2G17630.1 (AT2G17630.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein)

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-84
Identity = 154/197 (78.17%), Postives = 172/197 (87.31%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P+ VL    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIG A++ITPVML
Sbjct: 226 PDGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNARDITPVML 285

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIH ENSSLYNTPPC+GIYMCGLVF+DLL QGGLKEVEKKN++KAE+LY AI++S GF
Sbjct: 286 DYKIHDENSSLYNTPPCFGIYMCGLVFDDLLEQGGLKEVEKKNQRKAELLYNAIDESRGF 345

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEK+ELE EF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 346 FRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 405

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMK+FQ RHA
Sbjct: 406 GVEKLVAFMKDFQARHA 422

[Close]

BLAST of Cp4.1LG08g13010 vs. TAIR10
Match: AT4G35630.1 (AT4G35630.1 phosphoserine aminotransferase)

HSP 1 Score: 308.9 bits (790), Expect = 3.1e-84
Identity = 149/169 (88.17%), Postives = 161/169 (95.27%), Query Frame = 1


Query: 109 GAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYGIYMCGLVFE 168
           GAQKNVGPSGVTIVIIRKDLIG AQ+ITPVMLDYKIH ENSSLYNTPPC+GIYMCGLVFE
Sbjct: 262 GAQKNVGPSGVTIVIIRKDLIGNAQDITPVMLDYKIHDENSSLYNTPPCFGIYMCGLVFE 321

Query: 169 DLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTLEKAELEGEF 228
           DLL QGGLKEVEKKN++KA++LY AI +SNGF+RCPVE SVRSLMNVPFTLEK+ELE EF
Sbjct: 322 DLLEQGGLKEVEKKNQRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFTLEKSELEAEF 381

Query: 229 VKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
           +KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK+FQ +HA
Sbjct: 382 IKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430

[Close]

BLAST of Cp4.1LG08g13010 vs. NCBI nr
Match: gi|659095271|ref|XP_008448492.1| (PREDICTED: phosphoserine aminotransferase, chloroplastic-like [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 4.9e-87
Identity = 165/197 (83.76%), Postives = 177/197 (89.85%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P+ +L    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIGGAQ+ITPVML
Sbjct: 233 PKNLLVADMSSNFCSKPVDISKFGIIYAGAQKNVGPSGVTIVIIRKDLIGGAQDITPVML 292

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIHHEN+SLYNTPPCYGIYMCGLVFEDLL QGGLKEVEKKNKKKA+ILYEAI+QSNGF
Sbjct: 293 DYKIHHENNSLYNTPPCYGIYMCGLVFEDLLQQGGLKEVEKKNKKKADILYEAIDQSNGF 352

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           YRCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 353 YRCPVERSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 412

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMK+FQ RHA
Sbjct: 413 GVEKLVAFMKDFQARHA 429

[Close]

BLAST of Cp4.1LG08g13010 vs. NCBI nr
Match: gi|449456867|ref|XP_004146170.1| (PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-86
Identity = 163/197 (82.74%), Postives = 177/197 (89.85%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P+ +L    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIGGAQ+ITPVML
Sbjct: 231 PKNLLVADMSSNFCSKPVDISKFGIIYAGAQKNVGPSGVTIVIIRKDLIGGAQDITPVML 290

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           D+KIHHEN+SLYNTPPCYGIYMCGLVFEDLL QGGLKEVEKKNKKKA+ILYEAI+QSNGF
Sbjct: 291 DFKIHHENNSLYNTPPCYGIYMCGLVFEDLLQQGGLKEVEKKNKKKADILYEAIDQSNGF 350

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 351 FRCPVERSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 410

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMK+FQ RHA
Sbjct: 411 GVEKLVAFMKDFQARHA 427

[Close]

BLAST of Cp4.1LG08g13010 vs. NCBI nr
Match: gi|923707362|ref|XP_013661432.1| (PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Brassica napus])

HSP 1 Score: 314.3 bits (804), Expect = 2.1e-82
Identity = 157/197 (79.70%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P  VL    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIG AQ++TPVML
Sbjct: 209 PNGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNAQDVTPVML 268

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIH ENSSLYNTPPC+GIYMCGLVF+DLLAQGGL EVEKKN++KA+ILY+AI++S GF
Sbjct: 269 DYKIHDENSSLYNTPPCFGIYMCGLVFDDLLAQGGLNEVEKKNQRKAKILYDAIDESRGF 328

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 329 FRCPVEKSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 388

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMKEFQ RHA
Sbjct: 389 GVEKLVAFMKEFQARHA 405

[Close]

BLAST of Cp4.1LG08g13010 vs. NCBI nr
Match: gi|685354693|ref|XP_009112441.1| (PREDICTED: phosphoserine aminotransferase 1, chloroplastic [Brassica rapa])

HSP 1 Score: 314.3 bits (804), Expect = 2.1e-82
Identity = 157/197 (79.70%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 81  PETVLRKAESELFNWRGSGMSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVML 140
           P  VL    S  F  +   +S   + + GAQKNVGPSGVTIVIIRKDLIG AQ++TPVML
Sbjct: 219 PNGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNAQDVTPVML 278

Query: 141 DYKIHHENSSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGF 200
           DYKIH ENSSLYNTPPC+GIYMCGLVF+DLLAQGGL EVEKKN++KA+ILY+AI++S GF
Sbjct: 279 DYKIHDENSSLYNTPPCFGIYMCGLVFDDLLAQGGLNEVEKKNQRKAKILYDAIDESRGF 338

Query: 201 YRCPVEPSVRSLMNVPFTLEKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 260
           +RCPVE SVRSLMNVPFTLEKAELEGEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 339 FRCPVEKSVRSLMNVPFTLEKAELEGEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 398

Query: 261 GVEKLVAFMKEFQGRHA 278
           GVEKLVAFMKEFQ RHA
Sbjct: 399 GVEKLVAFMKEFQARHA 415

[Close]

BLAST of Cp4.1LG08g13010 vs. NCBI nr
Match: gi|359497849|ref|XP_003635669.1| (PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Vitis vinifera])

HSP 1 Score: 313.5 bits (802), Expect = 3.6e-82
Identity = 153/178 (85.96%), Postives = 166/178 (93.26%), Query Frame = 1


Query: 100 MSVMEMSHRGAQKNVGPSGVTIVIIRKDLIGGAQEITPVMLDYKIHHENSSLYNTPPCYG 159
           +S   + + GAQKNVGPSGVTIVI+RKDLIG AQEITP+M DYKIH EN+SLYNTPPCYG
Sbjct: 250 VSKFGLIYAGAQKNVGPSGVTIVIVRKDLIGNAQEITPIMFDYKIHVENNSLYNTPPCYG 309

Query: 160 IYMCGLVFEDLLAQGGLKEVEKKNKKKAEILYEAINQSNGFYRCPVEPSVRSLMNVPFTL 219
           IYMCGLVFEDLLAQGGLKEVEKKN KKA+ILY+AI++SNGFYRCPVE SVRSLMNVPFTL
Sbjct: 310 IYMCGLVFEDLLAQGGLKEVEKKNIKKAQILYDAIDESNGFYRCPVEKSVRSLMNVPFTL 369

Query: 220 EKAELEGEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQGRHA 278
           EK++LE EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK+FQ RHA
Sbjct: 370 EKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 427

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SERB2_ARATH	4.2e-83	78.17	Phosphoserine aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=PSAT2...	[more]
SERB1_ARATH	5.5e-83	88.17	Phosphoserine aminotransferase 1, chloroplastic OS=Arabidopsis thaliana GN=PSAT1...	[more]
SERC_SPIOL	3.0e-81	84.80	Phosphoserine aminotransferase, chloroplastic OS=Spinacia oleracea PE=2 SV=1	[more]
SERC_LARHH	1.9e-51	58.33	Phosphoserine aminotransferase OS=Laribacter hongkongensis (strain HLHK9) GN=ser...	[more]
SERC_VIBPA	5.8e-48	56.14	Phosphoserine aminotransferase OS=Vibrio parahaemolyticus serotype O3:K6 (strain...	[more]

BLAST of Cp4.1LG08g13010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L643_CUCSA	2.9e-86	82.74	Phosphoserine aminotransferase OS=Cucumis sativus GN=Csa_3G002370 PE=3 SV=1	[more]
M4F853_BRARP	1.5e-82	79.70	Phosphoserine aminotransferase OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]
A0A078GXX6_BRANA	1.5e-82	79.70	Phosphoserine aminotransferase OS=Brassica napus GN=BnaA09g09210D PE=3 SV=1	[more]
F6H8F3_VITVI	2.5e-82	85.96	Phosphoserine aminotransferase OS=Vitis vinifera GN=VIT_00s2579g00010 PE=3 SV=1	[more]
F6I7S4_VITVI	2.5e-82	85.96	Phosphoserine aminotransferase OS=Vitis vinifera GN=VIT_00s2607g00010 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g13010 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17630.1	2.4e-84	78.17	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT4G35630.1	3.1e-84	88.17	phosphoserine aminotransferase	[more]

BLAST of Cp4.1LG08g13010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095271\|ref\|XP_008448492.1\|	4.9e-87	83.76	PREDICTED: phosphoserine aminotransferase, chloroplastic-like [Cucumis melo]	[more]
gi\|449456867\|ref\|XP_004146170.1\|	4.1e-86	82.74	PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Cucumis sativus...	[more]
gi\|923707362\|ref\|XP_013661432.1\|	2.1e-82	79.70	PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Brassica napus]	[more]
gi\|685354693\|ref\|XP_009112441.1\|	2.1e-82	79.70	PREDICTED: phosphoserine aminotransferase 1, chloroplastic [Brassica rapa]	[more]
gi\|359497849\|ref\|XP_003635669.1\|	3.6e-82	85.96	PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015424	PyrdxlP-dep_Trfase
IPR015422	PyrdxlP-dep_Trfase_dom1
IPR015421	PyrdxlP-dep_Trfase_major
IPR000192	Aminotrans_V_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006564	L-serine biosynthetic process
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0042816	vitamin B6 metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004648	O-phospho-L-serine:2-oxoglutarate aminotransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13010.1	Cp4.1LG08g13010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000192	Aminotransferase class V domain	PFAM	PF00266	Aminotran_5	coord: 109..265 score: 7.7
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	G3DSA:3.40.640.10		coord: 83..109 score: 2.2E-6coord: 110..172 score: 1.0
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	G3DSA:3.90.1150.10		coord: 174..275 score: 3.9
IPR015424	Pyridoxal phosphate-dependent transferase	unknown	SSF53383	PLP-dependent transferases	coord: 69..109 score: 4.49E-9coord: 109..274 score: 2.31
None	No IPR available	PANTHER	PTHR21152	AMINOTRANSFERASE CLASS V	coord: 109..276 score: 2.8
None	No IPR available	PANTHER	PTHR21152:SF1	PHOSPHOSERINE AMINOTRANSFERASE	coord: 109..276 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g13010	Cucsa.323010	Cucumber (Gy14) v1	cgycpeB0858
Cp4.1LG08g13010	CmaCh06G001460	Cucurbita maxima (Rimu)	cmacpeB852
Cp4.1LG08g13010	CmoCh06G001400	Cucurbita moschata (Rifu)	cmocpeB797
Cp4.1LG08g13010	Cla008937	Watermelon (97103) v1	cpewmB833
Cp4.1LG08g13010	Csa3G002370	Cucumber (Chinese Long) v2	cpecuB851
Cp4.1LG08g13010	MELO3C013732	Melon (DHL92) v3.5.1	cpemeB816
Cp4.1LG08g13010	ClCG10G000330	Watermelon (Charleston Gray)	cpewcgB768
Cp4.1LG08g13010	CSPI03G00350	Wild cucumber (PI 183967)	cpecpiB853
Cp4.1LG08g13010	Lsi07G010650	Bottle gourd (USVL1VR-Ls)	cpelsiB722
Cp4.1LG08g13010	MELO3C013732.2	Melon (DHL92) v3.6.1	cpemedB949
Cp4.1LG08g13010	CsaV3_3G000370	Cucumber (Chinese Long) v3	cpecucB1048
Cp4.1LG08g13010	Bhi11G000231	Wax gourd	cpewgoB1076
Cp4.1LG08g13010	CsGy3G000310	Cucumber (Gy14) v2	cgybcpeB446
Cp4.1LG08g13010	Carg01185	Silver-seed gourd	carcpeB0233

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g13010	Silver-seed gourd	carcpeB0575
Cp4.1LG08g13010	Silver-seed gourd	carcpeB0603
Cp4.1LG08g13010	Cucurbita pepo (Zucchini)	cpecpeB252
Cp4.1LG08g13010	Cucurbita maxima (Rimu)	cmacpeB366
Cp4.1LG08g13010	Cucurbita moschata (Rifu)	cmocpeB330