Cp4.1LG08g11830 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g11830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLegume-specific protein
LocationCp4.1LG08 : 8717125 .. 8717400 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTCACAGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGACGGTTCATATTCGGCCACCTCACCTTCGAAACCAGCCTCTTCCACCGCCACTCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCAAGTCGAGTCGCCGCCTGA

mRNA sequence

ATGGAAGGTCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTCACAGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGACGGTTCATATTCGGCCACCTCACCTTCGAAACCAGCCTCTTCCACCGCCACTCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCAAGTCGAGTCGCCGCCTGA

Coding sequence (CDS)

ATGGAAGGTCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTCACAGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGACGGTTCATATTCGGCCACCTCACCTTCGAAACCAGCCTCTTCCACCGCCACTCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCAAGTCGAGTCGCCGCCTGA

Protein sequence

MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYSATSPSKPASSTATQILVATGVQSPLRPLAPSRVAA
Homology
[Close]
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: A0A0A0LD26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-27
Identity = 70/91 (76.92%), Postives = 75/91 (82.42%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYSATSP 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKPASSTATQILVATGVQSPLRPLAPSRVAA 92
          +   SST TQILV+TGVQSPLR L   RVAA
Sbjct: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 88

[Close]
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: K7MT87_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-19
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L   R+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: A0A0B2P904_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_036661 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.4e-19
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L    +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

[Close]
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: A0A061EYS9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021870 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-18
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSD-G 60
          MEGLIPFVYRAIV +KN ++   + +W ++SPSASY+RLP+GDSGRF      +FQSD G
Sbjct: 1  MEGLIPFVYRAIVQHKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60

Query: 61 SYSATSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +SA+SPS  A+S+ TQI+++TGVQSP+  L   RV A
Sbjct: 61 DFSASSPSSMAASSTTQIILSTGVQSPVCRLTSRRVVA 97

[Close]
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: B9T7Q8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0207600 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-17
Identity = 60/107 (56.07%), Postives = 69/107 (64.49%), Query Frame = 1 

Query: 1   MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSDGS 60
           MEGLIPFVYRAI+ YKN  +  P+ SWL +SPS+ Y+RLP+GDSGRF      LF SD  
Sbjct: 1   MEGLIPFVYRAIMQYKNGNE-GPLGSWLNESPSSCYMRLPTGDSGRFQASDIRLFGSDYG 60

Query: 61  YSA----------TSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +S           TS S   SST TQILV+TG QSPL  L P RVAA
Sbjct: 61  FSTTSTTTNTNTITSSSSIKSSTTTQILVSTGAQSPLCSLTPRRVAA 106

[Close]
BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|778683469|ref|XP_011651886.1| (PREDICTED: uncharacterized protein LOC105434951 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-27
Identity = 70/91 (76.92%), Postives = 75/91 (82.42%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYSATSP 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKPASSTATQILVATGVQSPLRPLAPSRVAA 92
          +   SST TQILV+TGVQSPLR L   RVAA
Sbjct: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 88

[Close]
BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|947050508|gb|KRH00037.1| (hypothetical protein GLYMA_18G187300 [Glycine max])

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-19
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L   R+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]
BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|734320874|gb|KHN04064.1| (hypothetical protein glysoja_036661 [Glycine soja])

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L    +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

[Close]
BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|590629211|ref|XP_007026927.1| (Uncharacterized protein TCM_021870 [Theobroma cacao])

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-18
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSD-G 60
          MEGLIPFVYRAIV +KN ++   + +W ++SPSASY+RLP+GDSGRF      +FQSD G
Sbjct: 1  MEGLIPFVYRAIVQHKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60

Query: 61 SYSATSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +SA+SPS  A+S+ TQI+++TGVQSP+  L   RV A
Sbjct: 61 DFSASSPSSMAASSTTQIILSTGVQSPVCRLTSRRVVA 97

[Close]
BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|255587452|ref|XP_002534277.1| (PREDICTED: uncharacterized protein LOC8261800 [Ricinus communis])

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17
Identity = 60/107 (56.07%), Postives = 69/107 (64.49%), Query Frame = 1 

Query: 1   MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSDGS 60
           MEGLIPFVYRAI+ YKN  +  P+ SWL +SPS+ Y+RLP+GDSGRF      LF SD  
Sbjct: 1   MEGLIPFVYRAIMQYKNGNE-GPLGSWLNESPSSCYMRLPTGDSGRFQASDIRLFGSDYG 60

Query: 61  YSA----------TSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +S           TS S   SST TQILV+TG QSPL  L P RVAA
Sbjct: 61  FSTTSTTTNTNTITSSSSIKSSTTTQILVSTGAQSPLCSLTPRRVAA 106

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g11830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD26_CUCSA2.2e-2776.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G733930 PE=4 SV=1[more]
K7MT87_SOYBN1.3e-1961.70Uncharacterized protein OS=Glycine max GN=GLYMA_18G187300 PE=4 SV=1[more]
A0A0B2P904_GLYSO8.4e-1960.64Uncharacterized protein OS=Glycine soja GN=glysoja_036661 PE=4 SV=1[more]
A0A061EYS9_THECC2.4e-1857.14Uncharacterized protein OS=Theobroma cacao GN=TCM_021870 PE=4 SV=1[more]
B9T7Q8_RICCO1.2e-1756.07Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0207600 PE=4 SV=1[more]
BLAST of Cp4.1LG08g11830 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778683469|ref|XP_011651886.1|3.2e-2776.92PREDICTED: uncharacterized protein LOC105434951 [Cucumis sativus][more]
gi|947050508|gb|KRH00037.1|1.9e-1961.70hypothetical protein GLYMA_18G187300 [Glycine max][more]
gi|734320874|gb|KHN04064.1|1.2e-1860.64hypothetical protein glysoja_036661 [Glycine soja][more]
gi|590629211|ref|XP_007026927.1|3.5e-1857.14Uncharacterized protein TCM_021870 [Theobroma cacao][more]
gi|255587452|ref|XP_002534277.1|1.7e-1756.07PREDICTED: uncharacterized protein LOC8261800 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g11830.1Cp4.1LG08g11830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34670FAMILY NOT NAMEDcoord: 1..91
score: 2.6
NoneNo IPR availablePANTHERPTHR34670:SF3EXPRESSED PROTEINcoord: 1..91
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g11830Cucsa.175740Cucumber (Gy14) v1cgycpeB0490
Cp4.1LG08g11830CmaCh14G001170Cucurbita maxima (Rimu)cmacpeB296
Cp4.1LG08g11830CmaCh06G002780Cucurbita maxima (Rimu)cmacpeB852
Cp4.1LG08g11830CmoCh06G002770Cucurbita moschata (Rifu)cmocpeB797
Cp4.1LG08g11830CmoCh14G001140Cucurbita moschata (Rifu)cmocpeB259
Cp4.1LG08g11830Cla017926Watermelon (97103) v1cpewmB827
Cp4.1LG08g11830Csa3G733930Cucumber (Chinese Long) v2cpecuB860
Cp4.1LG08g11830MELO3C009230Melon (DHL92) v3.5.1cpemeB796
Cp4.1LG08g11830ClCG10G021430Watermelon (Charleston Gray)cpewcgB765
Cp4.1LG08g11830CSPI03G32010Wild cucumber (PI 183967)cpecpiB862
Cp4.1LG08g11830Lsi03G021370Bottle gourd (USVL1VR-Ls)cpelsiB707
Cp4.1LG08g11830MELO3C009230.2Melon (DHL92) v3.6.1cpemedB937
Cp4.1LG08g11830CsaV3_3G034590Cucumber (Chinese Long) v3cpecucB1057
Cp4.1LG08g11830Bhi11G001902Wax gourdcpewgoB1073
Cp4.1LG08g11830CsGy3G029830Cucumber (Gy14) v2cgybcpeB455
Cp4.1LG08g11830Carg19949Silver-seed gourdcarcpeB0792
Cp4.1LG08g11830Carg13825Silver-seed gourdcarcpeB1292
Cp4.1LG08g11830Carg12522Silver-seed gourdcarcpeB1393
Cp4.1LG08g11830Carg01063Silver-seed gourdcarcpeB0233
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g11830Melon (DHL92) v3.5.1cpemeB792
Cp4.1LG08g11830Cucumber (Gy14) v2cgybcpeB149
Cp4.1LG08g11830Cucumber (Gy14) v2cgybcpeB701
Cp4.1LG08g11830Cucumber (Gy14) v2cgybcpeB893
Cp4.1LG08g11830Melon (DHL92) v3.6.1cpemedB935
Cp4.1LG08g11830Silver-seed gourdcarcpeB0481
Cp4.1LG08g11830Silver-seed gourdcarcpeB0832
Cp4.1LG08g11830Cucumber (Chinese Long) v3cpecucB1043
Cp4.1LG08g11830Cucumber (Chinese Long) v3cpecucB1068
Cp4.1LG08g11830Cucumber (Chinese Long) v3cpecucB1080
Cp4.1LG08g11830Wax gourdcpewgoB1126
Cp4.1LG08g11830Cucurbita pepo (Zucchini)cpecpeB487
Cp4.1LG08g11830Cucurbita pepo (Zucchini)cpecpeB325
Cp4.1LG08g11830Cucurbita pepo (Zucchini)cpecpeB408
Cp4.1LG08g11830Cucurbita pepo (Zucchini)cpecpeB429
Cp4.1LG08g11830Cucurbita pepo (Zucchini)cpecpeB447
Cp4.1LG08g11830Cucurbita maxima (Rimu)cmacpeB593
Cp4.1LG08g11830Cucurbita maxima (Rimu)cmacpeB651
Cp4.1LG08g11830Cucurbita maxima (Rimu)cmacpeB757
Cp4.1LG08g11830Cucurbita moschata (Rifu)cmocpeB541
Cp4.1LG08g11830Cucurbita moschata (Rifu)cmocpeB600
Cp4.1LG08g11830Cucurbita moschata (Rifu)cmocpeB711
Cp4.1LG08g11830Cucurbita moschata (Rifu)cmocpeB832
Cp4.1LG08g11830Wild cucumber (PI 183967)cpecpiB882
Cp4.1LG08g11830Cucumber (Chinese Long) v2cpecuB879
Cp4.1LG08g11830Bottle gourd (USVL1VR-Ls)cpelsiB700
Cp4.1LG08g11830Bottle gourd (USVL1VR-Ls)cpelsiB706
Cp4.1LG08g11830Watermelon (Charleston Gray)cpewcgB782
Cp4.1LG08g11830Watermelon (97103) v1cpewmB850