Cp4.1LG08g11830 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG08g11830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLegume-specific protein
LocationCp4.1LG08 : 8717125 .. 8717400 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTCACAGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGACGGTTCATATTCGGCCACCTCACCTTCGAAACCAGCCTCTTCCACCGCCACTCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCAAGTCGAGTCGCCGCCTGA

mRNA sequence

ATGGAAGGTCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTCACAGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGACGGTTCATATTCGGCCACCTCACCTTCGAAACCAGCCTCTTCCACCGCCACTCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCAAGTCGAGTCGCCGCCTGA

Coding sequence (CDS)

ATGGAAGGTCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTCACAGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGACGGTTCATATTCGGCCACCTCACCTTCGAAACCAGCCTCTTCCACCGCCACTCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCAAGTCGAGTCGCCGCCTGA

Protein sequence

MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYSATSPSKPASSTATQILVATGVQSPLRPLAPSRVAA
BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: A0A0A0LD26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-27
Identity = 70/91 (76.92%), Postives = 75/91 (82.42%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYSATSP 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKPASSTATQILVATGVQSPLRPLAPSRVAA 92
          +   SST TQILV+TGVQSPLR L   RVAA
Sbjct: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 88

BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: K7MT87_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-19
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L   R+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: A0A0B2P904_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_036661 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.4e-19
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L    +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: A0A061EYS9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021870 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-18
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSD-G 60
          MEGLIPFVYRAIV +KN ++   + +W ++SPSASY+RLP+GDSGRF      +FQSD G
Sbjct: 1  MEGLIPFVYRAIVQHKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60

Query: 61 SYSATSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +SA+SPS  A+S+ TQI+++TGVQSP+  L   RV A
Sbjct: 61 DFSASSPSSMAASSTTQIILSTGVQSPVCRLTSRRVVA 97

BLAST of Cp4.1LG08g11830 vs. TrEMBL
Match: B9T7Q8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0207600 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-17
Identity = 60/107 (56.07%), Postives = 69/107 (64.49%), Query Frame = 1

Query: 1   MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSDGS 60
           MEGLIPFVYRAI+ YKN  +  P+ SWL +SPS+ Y+RLP+GDSGRF      LF SD  
Sbjct: 1   MEGLIPFVYRAIMQYKNGNE-GPLGSWLNESPSSCYMRLPTGDSGRFQASDIRLFGSDYG 60

Query: 61  YSA----------TSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +S           TS S   SST TQILV+TG QSPL  L P RVAA
Sbjct: 61  FSTTSTTTNTNTITSSSSIKSSTTTQILVSTGAQSPLCSLTPRRVAA 106

BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|778683469|ref|XP_011651886.1| (PREDICTED: uncharacterized protein LOC105434951 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-27
Identity = 70/91 (76.92%), Postives = 75/91 (82.42%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYSATSP 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 SKPASSTATQILVATGVQSPLRPLAPSRVAA 92
          +   SST TQILV+TGVQSPLR L   RVAA
Sbjct: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 88

BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|947050508|gb|KRH00037.1| (hypothetical protein GLYMA_18G187300 [Glycine max])

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-19
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L   R+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|734320874|gb|KHN04064.1| (hypothetical protein glysoja_036661 [Glycine soja])

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSD-GSYSATS 60
          MEGLIPFVY+AI+ YK DK   PI SWL +SPS SY+RLP+GDSGRF  Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PS--KPASSTATQILVATGVQSPLRPLAPSRVAA 92
          PS   P SS+ATQI+V++GVQSP + L    +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|590629211|ref|XP_007026927.1| (Uncharacterized protein TCM_021870 [Theobroma cacao])

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-18
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1

Query: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSD-G 60
          MEGLIPFVYRAIV +KN ++   + +W ++SPSASY+RLP+GDSGRF      +FQSD G
Sbjct: 1  MEGLIPFVYRAIVQHKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60

Query: 61 SYSATSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +SA+SPS  A+S+ TQI+++TGVQSP+  L   RV A
Sbjct: 61 DFSASSPSSMAASSTTQIILSTGVQSPVCRLTSRRVVA 97

BLAST of Cp4.1LG08g11830 vs. NCBI nr
Match: gi|255587452|ref|XP_002534277.1| (PREDICTED: uncharacterized protein LOC8261800 [Ricinus communis])

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17
Identity = 60/107 (56.07%), Postives = 69/107 (64.49%), Query Frame = 1

Query: 1   MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRF------LFQSDGS 60
           MEGLIPFVYRAI+ YKN  +  P+ SWL +SPS+ Y+RLP+GDSGRF      LF SD  
Sbjct: 1   MEGLIPFVYRAIMQYKNGNE-GPLGSWLNESPSSCYMRLPTGDSGRFQASDIRLFGSDYG 60

Query: 61  YSA----------TSPSKPASSTATQILVATGVQSPLRPLAPSRVAA 92
           +S           TS S   SST TQILV+TG QSPL  L P RVAA
Sbjct: 61  FSTTSTTTNTNTITSSSSIKSSTTTQILVSTGAQSPLCSLTPRRVAA 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LD26_CUCSA2.2e-2776.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G733930 PE=4 SV=1[more]
K7MT87_SOYBN1.3e-1961.70Uncharacterized protein OS=Glycine max GN=GLYMA_18G187300 PE=4 SV=1[more]
A0A0B2P904_GLYSO8.4e-1960.64Uncharacterized protein OS=Glycine soja GN=glysoja_036661 PE=4 SV=1[more]
A0A061EYS9_THECC2.4e-1857.14Uncharacterized protein OS=Theobroma cacao GN=TCM_021870 PE=4 SV=1[more]
B9T7Q8_RICCO1.2e-1756.07Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0207600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778683469|ref|XP_011651886.1|3.2e-2776.92PREDICTED: uncharacterized protein LOC105434951 [Cucumis sativus][more]
gi|947050508|gb|KRH00037.1|1.9e-1961.70hypothetical protein GLYMA_18G187300 [Glycine max][more]
gi|734320874|gb|KHN04064.1|1.2e-1860.64hypothetical protein glysoja_036661 [Glycine soja][more]
gi|590629211|ref|XP_007026927.1|3.5e-1857.14Uncharacterized protein TCM_021870 [Theobroma cacao][more]
gi|255587452|ref|XP_002534277.1|1.7e-1756.07PREDICTED: uncharacterized protein LOC8261800 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g11830.1Cp4.1LG08g11830.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34670FAMILY NOT NAMEDcoord: 1..91
score: 2.6
NoneNo IPR availablePANTHERPTHR34670:SF3EXPRESSED PROTEINcoord: 1..91
score: 2.6

The following gene(s) are paralogous to this gene:

None