Cp4.1LG08g07970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCAAAACAAAAAGAAGATACACCAGCCATGGCCTCAAAAGATAATACCTCACTCGATGATGGGGTTGTTCCTCGTCGATTTGCAAACTTTCCACCAAGTGCATGGGGAGATTTCTTCATTTCCTATGATTCCAACACTATGGTATTTCAAATATATTATTTTGTTGTTGTTTAAATTACTAATTTTGATTCAATCGTTCGTGTTTATTTCATTCTGATTCTACAGTGATATCGTTTATTTTTGTACAAATATTAAGGAAAATCAGCTCGAGGAGAAGATGGTCGAGAAACAGCTTCAAAAGCTTAAAGAAGAAGTGATGAACATGTTTGTGACAACAGACAAGTCTTCGGAAAAATTAAGGTTGATAGATTCAATTCAACGCTTAGGTTTGTCCCATCACTTTCAACTGGAAATTAATGAAACACTTCAACTTCTGCAAAGCTCTTCCGACGATGATGACGATATTTACAATATTGCCCTTAAGTTTCGATTGCTTAGACAAGAAGGTTATTCTATTTCATCTGGTAAGTCTCTAGCTCCACCATTTTTAAAATTTTTAGAAAAAAATGAAAATCGGATTTGATTCGTAAATTTTGAGCAGAGATATTCAACAAGTTTATAAATGAAGAGGGAGAATTCAAAGAATCAATTGTGAAAGACAAAAGTGGAATATTAAGTTTGTACGAGGCGTCCCATTTAAGAATGAACGGAGAGTATACATTAGATAAAGCTTTGAGGTTCACAACTACTCATCTTCAAGAAATGGCCATGGATGAGAGCTCTCCTTTAGTAGATGAAGCCAAGCATGCTTTGAAGTGGCCAATCTATAAAACTGTGCCAAGGCTTATGACCAAGCACTACATTTCTGTCCATCAGAAGGATCCACCAAACAGTGTTTTGCTCACTTTTGCAAAGTTGGATTACACCACATCTCAAAAGCTTTATCAGAAAGAACTCGGTCAACATGCGAGGTTTGTCGTAAATTTTTTTTTTTTGAGGTGTTCAAAATATTCGATAATCTGAAAATTTCGATCAATTTAACCCAATTCAATTCGGGTGGGCTGGATTATAAACGTATTTAAATTGAATTAAGTTCAAATAAATGAAAACTTTACGGTAATTCACAATTTCTCCTAAAACTATATTGAGTTGAATTGAGTCGGTTGATTTTAAAATATAATTTTTTTTTATTTTTTTTTATCATTTATTGTTTTAACCACTCTTAAAAATATATGGACCATAGATAAGTAAATATAGAAGGAATTAACATTTTACTTATATTAAAAATAAAAATTTGAACTTCGTCACCTTTATATAGTTCAAAGTTTAATTTAGGCGTTTGTGCGTAAATATGTAGGGTTAGAAATCACGACTCTCCACACTAGTATGATATTGTCTGTCCACTTTCAGCACAAGCACTCATGGCTTTGTTGGCTTTGTTTTGGGCTTCTCCAAAAAGCATCCTACCAATGGAGATAATATTCCTCACTTATAAATCCATGATCTTCACTAAATTAGCTAAACGTAGGACTGACTCTCAATAATCCTCAACATGTAGGTGGTGGAAGCAGTTGAATTTAATAGAAAGACTATCTTTTGCACGAGATCGGGCAGTGGAGAGCTACTTTTGGGCGTTGGGAGTGTACTATGAACCCAACTACTCGGTTGGTAGAATGATATTAGCCAAAATTATTGCTCTAGCAACGGTTCTGGATGATATGTACGATGTATATGCTACATTGGATGAACTTGACCTATTCACAGAGGCAATTGAAAGGTTTAAGCTCTTTTTAACTCTTCGTTATATTTGGTTCATGAACTAGCTCTTCTGAATTGTCGTAAAAATTTGGATCATGAATAATTGGATTTAAGAATAGTATATTCTCCACTTCGATTTCGAATTTATTGGATTCATTTGGTTTATCTCCCATATTTTCATGTATGAACGTTAATACTGATTTGAGAGAATTAAGATTGCTATATCTATATTAAAACTTGTCCAGCATTATTTTGAGACGTGAAGTCATTGTCATTTGTGTTTTCCTAAAGTCAATTGGGAGGACTTTTGTTAGAGATTTTGTAATGTGAGAGTGTGAGAGATAAACTTGTAAACATTTTGGTTACAGTGATTGGCTGCCACCCGTGGATATAGGAGAATTTTTTCACTCCAAACCACGTAAATTTTCGTGCCGCTTTGTTTAATTTCTATTCGTGATTGTGTTAGTGGGGTCGATGTAGTTTCCATTTCCGCTACAACAATTGATATCAGAGCATCGGATTGAATCTTATGCCTTTTGATTAAATTTCAGGTGGGATACTAACTGCATGGAGAAGCTCCCAGAGTACATGAAGATATTTTATGAAGTGATATTAAAAACCTATGAAGAGTTTGAGGAAGATATGAGCAAGGACATCATTAACTATGCCATTAATTATGCAAAAGAAGCGGTATGAGTTGTTGCACACTAATCTAATCTAATGTTCATCACAAATAATGGCTCTCTTTCTAATTCTTTGTTTTGGGAACAGTTTAAAAGGCAGTGTAGAGTTTATTTTATGGAAGCTAAATGGTACCATGAAGGATATGTGCCAAGCATGGAGGAGTACATGAAAGTGTCCATTGTATCCACTTGTTACTATCTTTTTGCTCCAATTTCATTTCTTGGTATGGGCGTTGCTGCTTCTGAAGAGGCTTTCAAATGGGTTGAGAGTGATCCAATGATGCTCAAGGCAAGTGGAATAATTGGGAGGCTCATGAATGACATAACTTCACACAAGGTACACAACCCATTTAAAGTAAAGGGGAGAATTAATATTAAGTTTTGTTCATATATTTAGCTTCATTCAAGCTCACCTAATGGTGGGTATTAATTAGTTTCGAAGTGAAAAGTAATCGTGTAATGACTCAAACCCACCGCTAGCAGATATTGTTCTTTTTGGACTTTTTCTTTTCGGGTCTTCGTTCACGGTTTTTAAAACGCGTAGGGAGAGGTTTCCACACCGTTATAAAGAATGTTTATTTCTCCTCCCCACCAATGTGGGATCTCACAATGAACTGATAGTAAGGGATCCCATATCGGTTGGAGAAGAGAATGAAACATTTCTTTTTATAAGGGTGTGGAAACCTTCTTAAAACCCTTGAGGGGAAGCCCAAAGAGGAAAGCTCATAGAGAACAATATTTGTTGCGGTGGGCTTGGACTGTTGCAAATGATATTAGAGCTAGACACCGGGTGATGTGCTAGTGAGGAGGCTGAGCCCCGAAAGGGGATAGACACGAGGTGGTGTGCTAGCAAGGACTCTGGGTCCCGAAGGGGGTAGATTGTGAGATCCTATATCGGTTGGGGAGGAGATCGAAACATTCTTTATAAGAATCTTGAGGAGAAGTGGGAAAGAAAAAGTCCAAAGAGGACGGCATCTATTAGGAATGGGCTTGAACCGTCACAAATCACTTGGAAGCCGTTTGGTAATCAATTTTTTTTCTCTTTGGTGATTAGTTTGACCAAGAGAGAGGGGACGTTGGGTCAGCGGTTGAATGTTACATGAAGCAACATGGAGTATCAGAAGAAGAAACGTTGGTTGCATTGGAAAATGAAGTAGTAAGAGCATGGAAAGATGTAGTTGAAGACTATATGAAATCATCCAACATTTCAAAGGAGATCTGCATGCGTGTGTTGAATCTTGCACGCCTCTCAGACCGCTTTTATAAAGAGGAAGATGGTTACACATTCGCTGATGGAACAACCAAATGTTTCATTGCCTCTACCCTTGTCGACCCCGTACCAATA TTCAAAACAAAAAGAAGATACACCAGCCATGGCCTCAAAAGATAATACCTCACTCGATGATGGGGTTGTTCCTCGTCGATTTGCAAACTTTCCACCAAGTGCATGGGGAGATTTCTTCATTTCCTATGATTCCAACACTATGGAAAATCAGCTCGAGGAGAAGATGGTCGAGAAACAGCTTCAAAAGCTTAAAGAAGAAGTGATGAACATGTTTGTGACAACAGACAAGTCTTCGGAAAAATTAAGGTTGATAGATTCAATTCAACGCTTAGGTTTGTCCCATCACTTTCAACTGGAAATTAATGAAACACTTCAACTTCTGCAAAGCTCTTCCGACGATGATGACGATATTTACAATATTGCCCTTAAGTTTCGATTGCTTAGACAAGAAGGTTATTCTATTTCATCTGAGATATTCAACAAGTTTATAAATGAAGAGGGAGAATTCAAAGAATCAATTGTGAAAGACAAAAGTGGAATATTAAGTTTGTACGAGGCGTCCCATTTAAGAATGAACGGAGAGTATACATTAGATAAAGCTTTGAGGTTCACAACTACTCATCTTCAAGAAATGGCCATGGATGAGAGCTCTCCTTTAGTAGATGAAGCCAAGCATGCTTTGAAGTGGCCAATCTATAAAACTGTGCCAAGGCTTATGACCAAGCACTACATTTCTGTCCATCAGAAGGATCCACCAAACATGATATTAAAAACCTATGAAGAGTTTGAGGAAGATATGAGCAAGGACATCATTAACTATGCCATTAATTATGCAAAAGAAGCGTTTAAAAGGCAGTGTAGAGTTTATTTTATGGAAGCTAAATGGTACCATGAAGGATATGTGCCAAGCATGGAGGAGTACATGAAAGTGTCCATTGTATCCACTTGTTACTATCTTTTTGCTCCAATTTCATTTCTTGGTATGGGCGTTGCTGCTTCTGAAGAGGCTTTCAAATGGGTTGAGAGTGATCCAATGATGCTCAAGGCAAGTGGAATAATTGGGAGGCTCATGAATGACATAACTTCACACAAGCAACATGGAGTATCAGAAGAAGAAACGTTGGTTGCATTGGAAAATGAAGTAGTAAGAGCATGGAAAGATGTAGTTGAAGACTATATGAAATCATCCAACATTTCAAAGGAGATCTGCATGCGTGTGTTGAATCTTGCACGCCTCTCAGACCGCTTTTATAAAGAGGAAGATGGTTACACATTCGCTGATGGAACAACCAAATGTTTCATTGCCTCTACCCTTGTCGACCCCGTACCAATA ATGGCCTCAAAAGATAATACCTCACTCGATGATGGGGTTGTTCCTCGTCGATTTGCAAACTTTCCACCAAGTGCATGGGGAGATTTCTTCATTTCCTATGATTCCAACACTATGGAAAATCAGCTCGAGGAGAAGATGGTCGAGAAACAGCTTCAAAAGCTTAAAGAAGAAGTGATGAACATGTTTGTGACAACAGACAAGTCTTCGGAAAAATTAAGGTTGATAGATTCAATTCAACGCTTAGGTTTGTCCCATCACTTTCAACTGGAAATTAATGAAACACTTCAACTTCTGCAAAGCTCTTCCGACGATGATGACGATATTTACAATATTGCCCTTAAGTTTCGATTGCTTAGACAAGAAGGTTATTCTATTTCATCTGAGATATTCAACAAGTTTATAAATGAAGAGGGAGAATTCAAAGAATCAATTGTGAAAGACAAAAGTGGAATATTAAGTTTGTACGAGGCGTCCCATTTAAGAATGAACGGAGAGTATACATTAGATAAAGCTTTGAGGTTCACAACTACTCATCTTCAAGAAATGGCCATGGATGAGAGCTCTCCTTTAGTAGATGAAGCCAAGCATGCTTTGAAGTGGCCAATCTATAAAACTGTGCCAAGGCTTATGACCAAGCACTACATTTCTGTCCATCAGAAGGATCCACCAAACATGATATTAAAAACCTATGAAGAGTTTGAGGAAGATATGAGCAAGGACATCATTAACTATGCCATTAATTATGCAAAAGAAGCGTTTAAAAGGCAGTGTAGAGTTTATTTTATGGAAGCTAAATGGTACCATGAAGGATATGTGCCAAGCATGGAGGAGTACATGAAAGTGTCCATTGTATCCACTTGTTACTATCTTTTTGCTCCAATTTCATTTCTTGGTATGGGCGTTGCTGCTTCTGAAGAGGCTTTCAAATGGGTTGAGAGTGATCCAATGATGCTCAAGGCAAGTGGAATAATTGGGAGGCTCATGAATGACATAACTTCACACAAGCAACATGGAGTATCAGAAGAAGAAACGTTGGTTGCATTGGAAAATGAAGTAGTAAGAGCATGGAAAGATGTAGTTGAAGACTATATGAAATCATCCAACATTTCAAAGGAGATCTGCATGCGTGTGTTGAATCTTGCACGCCTCTCAGACCGCTTTTATAAAGAGGAAGATGGTTACACATTCGCTGATGGAACAACCAAATGTTTCATTGCCTCTACCCTTGTCGACCCCGTACCAATA MASKDNTSLDDGVVPRRFANFPPSAWGDFFISYDSNTMENQLEEKMVEKQLQKLKEEVMNMFVTTDKSSEKLRLIDSIQRLGLSHHFQLEINETLQLLQSSSDDDDDIYNIALKFRLLRQEGYSISSEIFNKFINEEGEFKESIVKDKSGILSLYEASHLRMNGEYTLDKALRFTTTHLQEMAMDESSPLVDEAKHALKWPIYKTVPRLMTKHYISVHQKDPPNMILKTYEEFEEDMSKDIINYAINYAKEAFKRQCRVYFMEAKWYHEGYVPSMEEYMKVSIVSTCYYLFAPISFLGMGVAASEEAFKWVESDPMMLKASGIIGRLMNDITSHKQHGVSEEETLVALENEVVRAWKDVVEDYMKSSNISKEICMRVLNLARLSDRFYKEEDGYTFADGTTKCFIASTLVDPVPI
BLAST of Cp4.1LG08g07970 vs. Swiss-Prot
Match: TPSGD_VITVI ((-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.0e-48 Identity = 104/211 (49.29%), Postives = 144/211 (68.25%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. Swiss-Prot
Match: TPS3_RICCO (Probable terpene synthase 3 OS=Ricinus communis GN=TPS3 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.1e-48 Identity = 133/358 (37.15%), Postives = 206/358 (57.54%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. Swiss-Prot
Match: TPS2_RICCO (Probable terpene synthase 2 OS=Ricinus communis GN=TPS2 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.3e-43 Identity = 95/237 (40.08%), Postives = 158/237 (66.67%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. Swiss-Prot
Match: AFSY1_CUCME (Alpha-farnesene synthase OS=Cucumis melo PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.9e-43 Identity = 106/243 (43.62%), Postives = 149/243 (61.32%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. Swiss-Prot
Match: STS1_THAGA (Sesquiterpene synthase 1 OS=Thapsia garganica GN=STS1 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.4e-43 Identity = 98/215 (45.58%), Postives = 146/215 (67.91%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TrEMBL
Match: A0A0A0L1X6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G039850 PE=3 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.7e-72 Identity = 141/209 (67.46%), Postives = 164/209 (78.47%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TrEMBL
Match: A0A0B4VFP0_CUCME (Sesquiterpene synthase Tps3 OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 5.3e-68 Identity = 132/209 (63.16%), Postives = 161/209 (77.03%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TrEMBL
Match: A0A0A0L4K8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G041370 PE=3 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 3.8e-66 Identity = 135/236 (57.20%), Postives = 169/236 (71.61%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TrEMBL
Match: A5BBY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021510 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 6.4e-66 Identity = 168/472 (35.59%), Postives = 249/472 (52.75%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TrEMBL
Match: A0A0A0L782_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G040850 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.3e-63 Identity = 147/306 (48.04%), Postives = 199/306 (65.03%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TAIR10
Match: AT5G23960.1 (AT5G23960.1 terpene synthase 21) HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27 Identity = 72/216 (33.33%), Postives = 126/216 (58.33%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TAIR10
Match: AT1G48800.1 (AT1G48800.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 119.8 bits (299), Expect = 4.0e-27 Identity = 88/263 (33.46%), Postives = 143/263 (54.37%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TAIR10
Match: AT4G20210.1 (AT4G20210.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 117.5 bits (293), Expect = 2.0e-26 Identity = 85/285 (29.82%), Postives = 145/285 (50.88%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TAIR10
Match: AT4G20230.1 (AT4G20230.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 117.1 bits (292), Expect = 2.6e-26 Identity = 102/363 (28.10%), Postives = 168/363 (46.28%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. TAIR10
Match: AT5G44630.1 (AT5G44630.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 115.2 bits (287), Expect = 9.9e-26 Identity = 75/224 (33.48%), Postives = 127/224 (56.70%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. NCBI nr
Match: gi|659096594|ref|XP_008449179.1| (PREDICTED: (-)-germacrene D synthase-like [Cucumis melo]) HSP 1 Score: 293.9 bits (751), Expect = 4.4e-76 Identity = 145/209 (69.38%), Postives = 170/209 (81.34%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. NCBI nr
Match: gi|778675684|ref|XP_011650453.1| (PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]) HSP 1 Score: 280.8 bits (717), Expect = 3.9e-72 Identity = 141/209 (67.46%), Postives = 164/209 (78.47%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. NCBI nr
Match: gi|745672490|gb|AJD19683.1| (sesquiterpene synthase Tps3 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 7.6e-68 Identity = 132/209 (63.16%), Postives = 161/209 (77.03%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. NCBI nr
Match: gi|659096596|ref|XP_008449181.1| (PREDICTED: (-)-germacrene D synthase-like [Cucumis melo]) HSP 1 Score: 265.0 bits (676), Expect = 2.2e-67 Identity = 132/209 (63.16%), Postives = 161/209 (77.03%), Query Frame = 1
BLAST of Cp4.1LG08g07970 vs. NCBI nr
Match: gi|970040273|ref|XP_015081514.1| (PREDICTED: probable terpene synthase 3 [Solanum pennellii]) HSP 1 Score: 263.5 bits (672), Expect = 6.4e-67 Identity = 154/427 (36.07%), Postives = 245/427 (57.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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