Cp4.1LG08g06850 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g06850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG08 : 5231278 .. 5232505 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGCCTTCACATGGCTGATGCTGATCACCAATTCCCTCGCCGGAAAGACCTTGGCAAACGTACCTCCTCCGCTGCCAACACCGACACCACCTCCACCACCCCTACCGACATCGGGGCTGCCACTGCTCCCTGTGGTGCCTGCAAGTTTCTCCGTAGAAAATGCGTCAATGGCTGCATCTTTGCACCTCATTTCGCCTCCGATCAGGGCGTTGCTCGCTTTGCCGCCGTGCATAAGGTGTTTGGAGCAAGTAATGTATCGAAGCTGCTGCTTCATATTCCGCTCAGTCGCCGGAACGACGCCGTCGTTACCATTTCTTATGAAGCTCAGGCTAGACTCTCCGACCCTGTCTATGGCTGTGTCTCAACTGTACTTGCCCTTCAACAACAGGTCTTCTTTTCCTTTGATATTTTAAACTAACAATATTTTATTACATATTATTTATTGATACATATTTTTCAAGAGAAATTATAGATAAGTTCGTAAATTTTGTTGTTGCTTCCTTACCAATAACGAAGATATTTACGCAAAATTTTAATAAAATTATAATCATGGAAAAAAAATATATTTATAAATTATATACTTGAATAAATTTTTATACTACTTTAAACACATTAATTTGGATAAATTTGAATTTTTCAAAAATATTTTCTGTTTTTGTAAATTATTAATCAAGCTTTCAGTATTATTTCTAAGAATTGTTTCGAAAAATATTTAGAAAAATTAAAATTGAAATATATTTATGAATTTCAGGTGGCATCTCTGCAAGCGGAGCTTGCGGCGGTTCAAAGTCAATTAATAAGCAGCAGGTTGGCATTTGCAAGTGCAATTCAGAACTCGCAGCCACCGCAAGTGGGAGTGCAGCTGCAGCCCGCATACTCCAACAACTCCTCCATCTCTGTCTCAGCCTCCACCTCCGCTCATAATGCAATCAATTTGAGCAGTTTTGCTTCCAATTATGACCTTCCGGCGGAGACTGCCCCATCTCCCCATCACTTGGAGCCTCTCCATCTCCCCCGCCGATCCATTGAAGACGAGGAAGACGAGGAAAATAGCCAGCTCCCTACCATCTTCGCCGACGACCTACTCCGTCCACGATGATCCAGTCCCTTTACCTTCATTTTCAATTCGTAAACCAATGCCTTCGCCAAGAATAACATTGAAGTCATTTTCCATCAGCTTTTCCTGCTAACATTGAGATAGAATCAATGTTGGAGGAAAAGAAAAC

mRNA sequence

CATTGCCTTCACATGGCTGATGCTGATCACCAATTCCCTCGCCGGAAAGACCTTGGCAAACGTACCTCCTCCGCTGCCAACACCGACACCACCTCCACCACCCCTACCGACATCGGGGCTGCCACTGCTCCCTGTGGTGCCTGCAAGTTTCTCCGTAGAAAATGCGTCAATGGCTGCATCTTTGCACCTCATTTCGCCTCCGATCAGGGCGTTGCTCGCTTTGCCGCCGTGCATAAGGTGTTTGGAGCAAGTAATGTATCGAAGCTGCTGCTTCATATTCCGCTCAGTCGCCGGAACGACGCCGTCGTTACCATTTCTTATGAAGCTCAGGCTAGACTCTCCGACCCTGTCTATGGCTGTGTCTCAACTGTACTTGCCCTTCAACAACAGGTGGCATCTCTGCAAGCGGAGCTTGCGGCGGTTCAAAGTCAATTAATAAGCAGCAGGTTGGCATTTGCAAGTGCAATTCAGAACTCGCAGCCACCGCAAGTGGGAGTGCAGCTGCAGCCCGCATACTCCAACAACTCCTCCATCTCTGTCTCAGCCTCCACCTCCGCTCATAATGCAATCAATTTGAGCAGTTTTGCTTCCAATTATGACCTTCCGGCGGAGACTGCCCCATCTCCCCATCACTTGGAGCCTCTCCATCTCCCCCGCCGATCCATTGAAGACGAGGAAGACGAGGAAAATAGCCAGCTCCCTACCATCTTCGCCGACGACCTACTCCGTCCACGATGATCCAGTCCCTTTACCTTCATTTTCAATTCGTAAACCAATGCCTTCGCCAAGAATAACATTGAAGTCATTTTCCATCAGCTTTTCCTGCTAACATTGAGATAGAATCAATGTTGGAGGAAAAGAAAAC

Coding sequence (CDS)

ATGGCTGATGCTGATCACCAATTCCCTCGCCGGAAAGACCTTGGCAAACGTACCTCCTCCGCTGCCAACACCGACACCACCTCCACCACCCCTACCGACATCGGGGCTGCCACTGCTCCCTGTGGTGCCTGCAAGTTTCTCCGTAGAAAATGCGTCAATGGCTGCATCTTTGCACCTCATTTCGCCTCCGATCAGGGCGTTGCTCGCTTTGCCGCCGTGCATAAGGTGTTTGGAGCAAGTAATGTATCGAAGCTGCTGCTTCATATTCCGCTCAGTCGCCGGAACGACGCCGTCGTTACCATTTCTTATGAAGCTCAGGCTAGACTCTCCGACCCTGTCTATGGCTGTGTCTCAACTGTACTTGCCCTTCAACAACAGGTGGCATCTCTGCAAGCGGAGCTTGCGGCGGTTCAAAGTCAATTAATAAGCAGCAGGTTGGCATTTGCAAGTGCAATTCAGAACTCGCAGCCACCGCAAGTGGGAGTGCAGCTGCAGCCCGCATACTCCAACAACTCCTCCATCTCTGTCTCAGCCTCCACCTCCGCTCATAATGCAATCAATTTGAGCAGTTTTGCTTCCAATTATGACCTTCCGGCGGAGACTGCCCCATCTCCCCATCACTTGGAGCCTCTCCATCTCCCCCGCCGATCCATTGAAGACGAGGAAGACGAGGAAAATAGCCAGCTCCCTACCATCTTCGCCGACGACCTACTCCGTCCACGATGA

Protein sequence

MADADHQFPRRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVSASTSAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDLLRPR
Homology
[Close]
BLAST of Cp4.1LG08g06850 vs. Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.3e-59
Identity = 142/234 (60.68%), Postives = 169/234 (72.22%), Query Frame = 1 

Query: 10  RRKDL-GKRTSSAANTDTTSTTPTDIGAAT------APCGACKFLRRKCVNGCIFAPHFA 69
           RRK L GKRTS    T + S+    + AAT      +PCGACKFLRRKCV+GCIFAPHF 
Sbjct: 14  RRKSLAGKRTSQQTPTSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFG 73

Query: 70  SDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLA 129
           SDQG ARFAAVHKVFGASNVSKLL HIP++RR+DAVVTISYEAQARLSDPVYGCVST+LA
Sbjct: 74  SDQGAARFAAVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILA 133

Query: 130 LQQQVASLQAELAAVQSQLISSRLAFASAIQ-----NSQPPQVGVQLQPAYSNNSSISVS 189
           LQQQVASLQAEL+ VQSQLI+SR+A A+ +Q       Q  Q+ V  QP YSNNSS S +
Sbjct: 134 LQQQVASLQAELSVVQSQLINSRVAMANVMQQQTHHQQQQQQLVVMQQPEYSNNSSASTT 193

Query: 190 ASTSAHNAINLSSFAS--NYDLPAETAPSPHHLEPL--HLPRRSIEDEEDEENS 228
            + +A N+  +++ A+  +YD+ A T    H L+P+  H  RR     EDEE S
Sbjct: 194 LAGAAMNSFTMTADAAAVSYDVMAPT-NLEHSLQPMPPHQQRRGDYQHEDEEES 246

[Close]
BLAST of Cp4.1LG08g06850 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 1 

Query: 35  GAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRR 94
           G    PCGACKFLRRKCV GCIFAP+F S+QG A FAAVHKVFGASNVSKLLLHIP+ RR
Sbjct: 32  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRR 91

Query: 95  NDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQN 154
           +DAVVTI YEAQAR+ DP+YGCV+ + ALQQQV +LQAE++ +Q+ L S  L      Q 
Sbjct: 92  SDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELP-----QP 151

Query: 155 SQPPQVGVQLQPAY 169
              PQ   Q QP +
Sbjct: 152 QTRPQPMPQPQPLF 160

[Close]
BLAST of Cp4.1LG08g06850 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.8e-36
Identity = 74/117 (63.25%), Postives = 98/117 (83.76%), Query Frame = 1 

Query: 39  APCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAV 98
           +PCGACKFLRRKC + CIFAP+F+S+QG ARFAA+HKVFGASNVSKLLL++P+  R +AV
Sbjct: 14  SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAV 73

Query: 99  VTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNS 156
           VTI+YEAQARL DPVYGCVS + ALQQQVA LQ+++  +++Q+   + + A  +++S
Sbjct: 74  VTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

[Close]
BLAST of Cp4.1LG08g06850 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.9e-36
Identity = 95/191 (49.74%), Postives = 120/191 (62.83%), Query Frame = 1 

Query: 19  SSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFG 78
           SS+ N  ++S      G    PCGACKFLRRKCV GCIFAP+F S+QG A FAAVHKVFG
Sbjct: 2   SSSGNPSSSS------GGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFG 61

Query: 79  ASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQ 138
           ASNVSKLL H+P  +R DAVV+I +EAQARL DP+YGCVS +++LQQQV SLQ EL+ +Q
Sbjct: 62  ASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQ 121

Query: 139 SQLISSRLAFASAIQNSQPPQVGVQLQ---PAYSNNSSISVSASTSAHNAINLSSFASNY 198
           + L +  L         QPPQV V       A S     ++S S    ++I     +S +
Sbjct: 122 AHLATLEL------PQPQPPQVPVSSSGSLQALSITDLPTISPSVYDLSSIFEPVMSSTW 180

Query: 199 DLPAETAPSPH 207
            +  +  PS H
Sbjct: 182 AMQQQPRPSDH 180

[Close]
BLAST of Cp4.1LG08g06850 vs. Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-35
Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1 

Query: 39  APCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAV 98
           +PCGACKFLRRKC  GC+FAP+F  +QG + FAA+HKVFGASN SKLL H+P+S R +A 
Sbjct: 10  SPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEAA 69

Query: 99  VTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQP 158
           +TISYEAQARL DP+YGCVS + ALQQQV +LQAEL  ++ Q   S + FA +  +  P
Sbjct: 70  ITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQS-MIFADSPTSENP 127

[Close]
BLAST of Cp4.1LG08g06850 vs. TrEMBL
Match: A0A0A0LCJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822390 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91
Identity = 195/235 (82.98%), Postives = 203/235 (86.38%), Query Frame = 1 

Query: 1   MADADHQFPRRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPH 60
           MADAD Q PRRK LG +    AN D  S T       TAPCGACKFLRRKCVNGCIFAPH
Sbjct: 1   MADAD-QLPRRKPLGNKR---ANRDPDSAT------VTAPCGACKFLRRKCVNGCIFAPH 60

Query: 61  FASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTV 120
           FASDQG ARFAAVHK+FGASNVSKLLLHIP+SRRNDAVVTISYEAQARLSDPVYGCVSTV
Sbjct: 61  FASDQGAARFAAVHKIFGASNVSKLLLHIPVSRRNDAVVTISYEAQARLSDPVYGCVSTV 120

Query: 121 LALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVSAST 180
           LALQQQVASLQAELAAVQ+QLISSRLAFA+A+QNSQ  QVGV LQPAYSNNSSI  SAST
Sbjct: 121 LALQQQVASLQAELAAVQAQLISSRLAFAAAVQNSQSSQVGV-LQPAYSNNSSI--SAST 180

Query: 181 SAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFAD 236
           SA NAINLSSFASNYDLP ETAPS HHLEPLH P R I++EEDEENSQLP IFAD
Sbjct: 181 SAPNAINLSSFASNYDLPTETAPSSHHLEPLHFPHRPIDEEEDEENSQLPAIFAD 222

[Close]
BLAST of Cp4.1LG08g06850 vs. TrEMBL
Match: B9SI79_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1321710 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 159/236 (67.37%), Postives = 181/236 (76.69%), Query Frame = 1 

Query: 10  RRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVAR 69
           RRK +GKR+S    +      P    AA APCGACKFLRRKC+NGCIFAPHF SDQG AR
Sbjct: 13  RRKGIGKRSSVECQS-VAEPAPQVTVAAAAPCGACKFLRRKCINGCIFAPHFGSDQGAAR 72

Query: 70  FAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVAS 129
           FAAVHKVFGASNVSKLLLHIP++RR++AVVTISYEAQARLSDPVYGCVST+LALQQQVAS
Sbjct: 73  FAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVAS 132

Query: 130 LQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQ----LQPAYSNNSSISVSASTSAHNA 189
           LQAEL  VQ+QLI+SR A A+ +QNSQ  Q   Q    LQPAYSNNSS S        N 
Sbjct: 133 LQAELTMVQTQLINSRFAMANVLQNSQQQQQQQQHIAMLQPAYSNNSSAST-------NL 192

Query: 190 INLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDLLRPR 242
           IN+SSF SN+DL  +TAPS   L+P+ L R S EDEEDEE SQ+P+IFAD++L  R
Sbjct: 193 INMSSFTSNFDLVTDTAPSSLSLDPIQLSRPSQEDEEDEEESQIPSIFADEILHRR 240

[Close]
BLAST of Cp4.1LG08g06850 vs. TrEMBL
Match: F6HMP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g01650 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.3e-70
Identity = 153/234 (65.38%), Postives = 181/234 (77.35%), Query Frame = 1 

Query: 10  RRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVAR 69
           RRK +GKR +        +   T +  A APCGACKFLRRKCV+GCIFAPHF SDQG AR
Sbjct: 13  RRKGVGKRPTGMVEDVVEAVAVTSLSPA-APCGACKFLRRKCVSGCIFAPHFGSDQGAAR 72

Query: 70  FAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVAS 129
           FAAVHKVFGASNVSKLLLHIP++RR+DAVVTISYEAQARLSDPVYGCVST+LALQQQVAS
Sbjct: 73  FAAVHKVFGASNVSKLLLHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVAS 132

Query: 130 LQAELAAVQSQLISSRLAFASAIQNSQPPQVG--VQLQPAYSNNSSISVSASTSAHNAIN 189
           LQAELA VQ+QLI+SR A A+A QNSQ  Q      LQPAYSNN       ST+++N IN
Sbjct: 133 LQAELAMVQAQLINSRFAVANAFQNSQQQQQHQIAVLQPAYSNN-------STASNNLIN 192

Query: 190 LSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDLLRPR 242
           + SF SN+D+ +ETAPS H LEPL L + S +++EDEE SQ P +F++++L  R
Sbjct: 193 VGSFTSNFDIASETAPSSHSLEPLQLSQPSQDEDEDEEESQNPVMFSNEILHRR 238

[Close]
BLAST of Cp4.1LG08g06850 vs. TrEMBL
Match: A0A067KXG0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02678 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.8e-69
Identity = 162/260 (62.31%), Postives = 186/260 (71.54%), Query Frame = 1 

Query: 3   DADHQFPRRKDLGKRTSSA---ANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAP 62
           DA     RRK +GKR SS    ++  +    P  + AA APCGACKFLRRKC++GCIFAP
Sbjct: 7   DATLTDTRRKGIGKRASSMPVESHQSSIGEQPAPVVAAAAPCGACKFLRRKCISGCIFAP 66

Query: 63  HFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVST 122
           HF SDQG ARFAAVHKVFGASNVSKLLLHIP++RR++AVVTISYEAQARLSDPVYGCVST
Sbjct: 67  HFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVST 126

Query: 123 VLALQQQVASLQAELAAVQSQLISSRLAFASAIQNS----------------QPPQVGVQ 182
           +LALQQQVASLQAELA VQ+QLI+SR A A+ +QNS                Q  Q  V 
Sbjct: 127 ILALQQQVASLQAELAMVQTQLINSRFAMANVLQNSHHHHHQQQQQQQQHHHQHDQQVVM 186

Query: 183 LQPAYSNNSSISVSASTSAHNAINLSSFASNYDL-PAETAPSPHH-LEPLHLPRRSIEDE 242
           LQPAYSNNSS S        N IN+SSF SN+DL  A+TAPS H  LEPL L  +  EDE
Sbjct: 187 LQPAYSNNSSAST-------NFINVSSFPSNFDLVTADTAPSSHSLLEPLQLSHQPHEDE 246

[Close]
BLAST of Cp4.1LG08g06850 vs. TrEMBL
Match: M5VTK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024802mg PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.8e-69
Identity = 151/237 (63.71%), Postives = 178/237 (75.11%), Query Frame = 1 

Query: 18  TSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVF 77
           T +AA T+ TST+ T + +  APCGACKFLRRKC++GCIFAPHF SDQG ARFAAVHKVF
Sbjct: 31  TEAAATTNNTSTSSTVVVSGAAPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVF 90

Query: 78  GASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAV 137
           GASNVSKLLLHIPL+RR DAVVTISYEAQARL+DPVYGCVST+LALQQQVASLQAELA V
Sbjct: 91  GASNVSKLLLHIPLNRRQDAVVTISYEAQARLADPVYGCVSTILALQQQVASLQAELAMV 150

Query: 138 QSQLISSRLAFASAI------------------QNSQPPQVGVQLQPAYSNNSSISVSAS 197
           Q+QLI+SR AFA+A+                  Q+ Q   + + LQPAYSN+SS S    
Sbjct: 151 QTQLINSRFAFANALQISTQQRQQHQKQQQQQQQHEQQQNMALMLQPAYSNSSSAST--- 210

Query: 198 TSAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADD 237
               N IN+ SF SN+DL AETAPS   L+PL L R S ++E+DEE SQ+P +FA+D
Sbjct: 211 ----NLINMCSFTSNFDLAAETAPSSQSLDPLQLSRPSQDEEDDEEESQVPLMFAND 260

[Close]
BLAST of Cp4.1LG08g06850 vs. TAIR10
Match: AT3G03760.1 (AT3G03760.1 LOB domain-containing protein 20)

HSP 1 Score: 228.4 bits (581), Expect = 4.7e-60
Identity = 142/234 (60.68%), Postives = 169/234 (72.22%), Query Frame = 1 

Query: 10  RRKDL-GKRTSSAANTDTTSTTPTDIGAAT------APCGACKFLRRKCVNGCIFAPHFA 69
           RRK L GKRTS    T + S+    + AAT      +PCGACKFLRRKCV+GCIFAPHF 
Sbjct: 14  RRKSLAGKRTSQQTPTSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFG 73

Query: 70  SDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLA 129
           SDQG ARFAAVHKVFGASNVSKLL HIP++RR+DAVVTISYEAQARLSDPVYGCVST+LA
Sbjct: 74  SDQGAARFAAVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILA 133

Query: 130 LQQQVASLQAELAAVQSQLISSRLAFASAIQ-----NSQPPQVGVQLQPAYSNNSSISVS 189
           LQQQVASLQAEL+ VQSQLI+SR+A A+ +Q       Q  Q+ V  QP YSNNSS S +
Sbjct: 134 LQQQVASLQAELSVVQSQLINSRVAMANVMQQQTHHQQQQQQLVVMQQPEYSNNSSASTT 193

Query: 190 ASTSAHNAINLSSFAS--NYDLPAETAPSPHHLEPL--HLPRRSIEDEEDEENS 228
            + +A N+  +++ A+  +YD+ A T    H L+P+  H  RR     EDEE S
Sbjct: 194 LAGAAMNSFTMTADAAAVSYDVMAPT-NLEHSLQPMPPHQQRRGDYQHEDEEES 246

[Close]
BLAST of Cp4.1LG08g06850 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-39
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 1 

Query: 35  GAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRR 94
           G    PCGACKFLRRKCV GCIFAP+F S+QG A FAAVHKVFGASNVSKLLLHIP+ RR
Sbjct: 32  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRR 91

Query: 95  NDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQN 154
           +DAVVTI YEAQAR+ DP+YGCV+ + ALQQQV +LQAE++ +Q+ L S  L      Q 
Sbjct: 92  SDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELP-----QP 151

Query: 155 SQPPQVGVQLQPAY 169
              PQ   Q QP +
Sbjct: 152 QTRPQPMPQPQPLF 160

[Close]
BLAST of Cp4.1LG08g06850 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-37
Identity = 74/117 (63.25%), Postives = 98/117 (83.76%), Query Frame = 1 

Query: 39  APCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAV 98
           +PCGACKFLRRKC + CIFAP+F+S+QG ARFAA+HKVFGASNVSKLLL++P+  R +AV
Sbjct: 14  SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAV 73

Query: 99  VTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNS 156
           VTI+YEAQARL DPVYGCVS + ALQQQVA LQ+++  +++Q+   + + A  +++S
Sbjct: 74  VTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

[Close]
BLAST of Cp4.1LG08g06850 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-37
Identity = 95/191 (49.74%), Postives = 120/191 (62.83%), Query Frame = 1 

Query: 19  SSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFG 78
           SS+ N  ++S      G    PCGACKFLRRKCV GCIFAP+F S+QG A FAAVHKVFG
Sbjct: 2   SSSGNPSSSS------GGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFG 61

Query: 79  ASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQ 138
           ASNVSKLL H+P  +R DAVV+I +EAQARL DP+YGCVS +++LQQQV SLQ EL+ +Q
Sbjct: 62  ASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQ 121

Query: 139 SQLISSRLAFASAIQNSQPPQVGVQLQ---PAYSNNSSISVSASTSAHNAINLSSFASNY 198
           + L +  L         QPPQV V       A S     ++S S    ++I     +S +
Sbjct: 122 AHLATLEL------PQPQPPQVPVSSSGSLQALSITDLPTISPSVYDLSSIFEPVMSSTW 180

Query: 199 DLPAETAPSPH 207
            +  +  PS H
Sbjct: 182 AMQQQPRPSDH 180

[Close]
BLAST of Cp4.1LG08g06850 vs. TAIR10
Match: AT3G58190.1 (AT3G58190.1 lateral organ boundaries-domain 29)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1 

Query: 39  APCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAV 98
           +PCGACKFLRRKC  GC+FAP+F  +QG + FAA+HKVFGASN SKLL H+P+S R +A 
Sbjct: 10  SPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEAA 69

Query: 99  VTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQP 158
           +TISYEAQARL DP+YGCVS + ALQQQV +LQAEL  ++ Q   S + FA +  +  P
Sbjct: 70  ITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQS-MIFADSPTSENP 127

[Close]
BLAST of Cp4.1LG08g06850 vs. NCBI nr
Match: gi|659085221|ref|XP_008443307.1| (PREDICTED: LOB domain-containing protein 20 [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 1.0e-93
Identity = 195/235 (82.98%), Postives = 204/235 (86.81%), Query Frame = 1 

Query: 1   MADADHQFPRRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPH 60
           MADAD Q PRRK LG +    AN D  S T       TAPCGACKFLRRKC+NGCIFAPH
Sbjct: 1   MADAD-QLPRRKPLGNKR---ANRDPDSAT------VTAPCGACKFLRRKCINGCIFAPH 60

Query: 61  FASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTV 120
           FASDQG ARFAAVHKVFGASNVSKLLLHIP+SRRNDAVVTISYEAQARLSDPVYGCVSTV
Sbjct: 61  FASDQGAARFAAVHKVFGASNVSKLLLHIPVSRRNDAVVTISYEAQARLSDPVYGCVSTV 120

Query: 121 LALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVSAST 180
           LALQQQVASLQAELAAVQ+Q+ISSRLAFA+A+QNS P QVGV LQPAYSNNSSISVSAST
Sbjct: 121 LALQQQVASLQAELAAVQAQVISSRLAFAAAVQNSHPSQVGV-LQPAYSNNSSISVSAST 180

Query: 181 SAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFAD 236
           S HNAINLSSFASNYDLP ETAPS HHLEP H P R I++EEDEENSQLP IFAD
Sbjct: 181 STHNAINLSSFASNYDLPTETAPSSHHLEPPHFPHRPIDEEEDEENSQLPAIFAD 224

[Close]
BLAST of Cp4.1LG08g06850 vs. NCBI nr
Match: gi|449438012|ref|XP_004136784.1| (PREDICTED: LOB domain-containing protein 20 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.7e-91
Identity = 195/235 (82.98%), Postives = 203/235 (86.38%), Query Frame = 1 

Query: 1   MADADHQFPRRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPH 60
           MADAD Q PRRK LG +    AN D  S T       TAPCGACKFLRRKCVNGCIFAPH
Sbjct: 1   MADAD-QLPRRKPLGNKR---ANRDPDSAT------VTAPCGACKFLRRKCVNGCIFAPH 60

Query: 61  FASDQGVARFAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTV 120
           FASDQG ARFAAVHK+FGASNVSKLLLHIP+SRRNDAVVTISYEAQARLSDPVYGCVSTV
Sbjct: 61  FASDQGAARFAAVHKIFGASNVSKLLLHIPVSRRNDAVVTISYEAQARLSDPVYGCVSTV 120

Query: 121 LALQQQVASLQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQLQPAYSNNSSISVSAST 180
           LALQQQVASLQAELAAVQ+QLISSRLAFA+A+QNSQ  QVGV LQPAYSNNSSI  SAST
Sbjct: 121 LALQQQVASLQAELAAVQAQLISSRLAFAAAVQNSQSSQVGV-LQPAYSNNSSI--SAST 180

Query: 181 SAHNAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFAD 236
           SA NAINLSSFASNYDLP ETAPS HHLEPLH P R I++EEDEENSQLP IFAD
Sbjct: 181 SAPNAINLSSFASNYDLPTETAPSSHHLEPLHFPHRPIDEEEDEENSQLPAIFAD 222

[Close]
BLAST of Cp4.1LG08g06850 vs. NCBI nr
Match: gi|255569462|ref|XP_002525698.1| (PREDICTED: LOB domain-containing protein 20 [Ricinus communis])

HSP 1 Score: 280.8 bits (717), Expect = 2.2e-72
Identity = 159/236 (67.37%), Postives = 181/236 (76.69%), Query Frame = 1 

Query: 10  RRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVAR 69
           RRK +GKR+S    +      P    AA APCGACKFLRRKC+NGCIFAPHF SDQG AR
Sbjct: 13  RRKGIGKRSSVECQS-VAEPAPQVTVAAAAPCGACKFLRRKCINGCIFAPHFGSDQGAAR 72

Query: 70  FAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVAS 129
           FAAVHKVFGASNVSKLLLHIP++RR++AVVTISYEAQARLSDPVYGCVST+LALQQQVAS
Sbjct: 73  FAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVAS 132

Query: 130 LQAELAAVQSQLISSRLAFASAIQNSQPPQVGVQ----LQPAYSNNSSISVSASTSAHNA 189
           LQAEL  VQ+QLI+SR A A+ +QNSQ  Q   Q    LQPAYSNNSS S        N 
Sbjct: 133 LQAELTMVQTQLINSRFAMANVLQNSQQQQQQQQHIAMLQPAYSNNSSAST-------NL 192

Query: 190 INLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDLLRPR 242
           IN+SSF SN+DL  +TAPS   L+P+ L R S EDEEDEE SQ+P+IFAD++L  R
Sbjct: 193 INMSSFTSNFDLVTDTAPSSLSLDPIQLSRPSQEDEEDEEESQIPSIFADEILHRR 240

[Close]
BLAST of Cp4.1LG08g06850 vs. NCBI nr
Match: gi|225439233|ref|XP_002271115.1| (PREDICTED: LOB domain-containing protein 20 [Vitis vinifera])

HSP 1 Score: 272.7 bits (696), Expect = 6.1e-70
Identity = 153/234 (65.38%), Postives = 181/234 (77.35%), Query Frame = 1 

Query: 10  RRKDLGKRTSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVAR 69
           RRK +GKR +        +   T +  A APCGACKFLRRKCV+GCIFAPHF SDQG AR
Sbjct: 13  RRKGVGKRPTGMVEDVVEAVAVTSLSPA-APCGACKFLRRKCVSGCIFAPHFGSDQGAAR 72

Query: 70  FAAVHKVFGASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVAS 129
           FAAVHKVFGASNVSKLLLHIP++RR+DAVVTISYEAQARLSDPVYGCVST+LALQQQVAS
Sbjct: 73  FAAVHKVFGASNVSKLLLHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVAS 132

Query: 130 LQAELAAVQSQLISSRLAFASAIQNSQPPQVG--VQLQPAYSNNSSISVSASTSAHNAIN 189
           LQAELA VQ+QLI+SR A A+A QNSQ  Q      LQPAYSNN       ST+++N IN
Sbjct: 133 LQAELAMVQAQLINSRFAVANAFQNSQQQQQHQIAVLQPAYSNN-------STASNNLIN 192

Query: 190 LSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADDLLRPR 242
           + SF SN+D+ +ETAPS H LEPL L + S +++EDEE SQ P +F++++L  R
Sbjct: 193 VGSFTSNFDIASETAPSSHSLEPLQLSQPSQDEDEDEEESQNPVMFSNEILHRR 238

[Close]
BLAST of Cp4.1LG08g06850 vs. NCBI nr
Match: gi|645278218|ref|XP_008244133.1| (PREDICTED: LOB domain-containing protein 20 [Prunus mume])

HSP 1 Score: 271.2 bits (692), Expect = 1.8e-69
Identity = 152/233 (65.24%), Postives = 174/233 (74.68%), Query Frame = 1 

Query: 18  TSSAANTDTTSTTPTDIGAATAPCGACKFLRRKCVNGCIFAPHFASDQGVARFAAVHKVF 77
           T +AA T  TST  T +    APCGACKFLRRKC++GCIFAPHF SDQG ARFAAVHKVF
Sbjct: 31  TEAAATTTNTSTNSTVVVGGAAPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVF 90

Query: 78  GASNVSKLLLHIPLSRRNDAVVTISYEAQARLSDPVYGCVSTVLALQQQVASLQAELAAV 137
           GASNVSKLLLHIPL+RR DAVVTISYEAQARL+DPVYGCVST+LALQQQVASLQAELA V
Sbjct: 91  GASNVSKLLLHIPLNRRQDAVVTISYEAQARLADPVYGCVSTILALQQQVASLQAELAMV 150

Query: 138 QSQLISSRLAFASAI--------------QNSQPPQVGVQLQPAYSNNSSISVSASTSAH 197
           Q+QLI+SR AFA+A+              Q+ Q   + + LQPAYSNNSS S        
Sbjct: 151 QTQLINSRFAFANALQISSQQRQQQQQQQQHEQQQNMALMLQPAYSNNSSAST------- 210

Query: 198 NAINLSSFASNYDLPAETAPSPHHLEPLHLPRRSIEDEEDEENSQLPTIFADD 237
           N IN+ SF SN+DL A+TAPS   L+PL L R S +DE+DEE SQ+P +FA D
Sbjct: 211 NLINMCSFTSNFDLAAKTAPSSQSLDPLQLSRPSQDDEDDEEESQVPLMFAHD 256

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g06850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD20_ARATH8.3e-5960.68LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1[more]
LBD18_ARATH2.8e-3864.18LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD16_ARATH5.8e-3663.25LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
LBD30_ARATH9.9e-3649.74LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD29_ARATH2.9e-3561.34LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1[more]
BLAST of Cp4.1LG08g06850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCJ9_CUCSA1.2e-9182.98Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822390 PE=4 SV=1[more]
B9SI79_RICCO1.6e-7267.37LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1321710 PE=4... [more]
F6HMP4_VITVI4.3e-7065.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g01650 PE=4 SV=... [more]
A0A067KXG0_JATCU2.8e-6962.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02678 PE=4 SV=1[more]
M5VTK5_PRUPE2.8e-6963.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024802mg PE=4 SV=1[more]
BLAST of Cp4.1LG08g06850 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G03760.14.7e-6060.68 LOB domain-containing protein 20[more]
AT2G45420.11.6e-3964.18 LOB domain-containing protein 18[more]
AT2G42430.13.3e-3763.25 lateral organ boundaries-domain 16[more]
AT4G00220.15.6e-3749.74 Lateral organ boundaries (LOB) domain family protein[more]
AT3G58190.11.6e-3661.34 lateral organ boundaries-domain 29[more]
BLAST of Cp4.1LG08g06850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085221|ref|XP_008443307.1|1.0e-9382.98PREDICTED: LOB domain-containing protein 20 [Cucumis melo][more]
gi|449438012|ref|XP_004136784.1|1.7e-9182.98PREDICTED: LOB domain-containing protein 20 [Cucumis sativus][more]
gi|255569462|ref|XP_002525698.1|2.2e-7267.37PREDICTED: LOB domain-containing protein 20 [Ricinus communis][more]
gi|225439233|ref|XP_002271115.1|6.1e-7065.38PREDICTED: LOB domain-containing protein 20 [Vitis vinifera][more]
gi|645278218|ref|XP_008244133.1|1.8e-6965.24PREDICTED: LOB domain-containing protein 20 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050789 regulation of biological process
biological_process GO:0050896 response to stimulus
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:1900150 regulation of defense response to fungus
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g06850.1Cp4.1LG08g06850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 40..138
score: 5.1
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 39..141
score: 23
NoneNo IPR availableunknownCoilCoilcoord: 120..140
scor
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 10..230
score: 2.6E
NoneNo IPR availablePANTHERPTHR31529:SF4LOB DOMAIN-CONTAINING PROTEIN 14-RELATEDcoord: 10..230
score: 2.6E