Cp4.1LG08g05280 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g05280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Phytochrome
Location	Cp4.1LG08 : 975528 .. 981686 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAGAGGCGAGAGAAGCCACAGAGAGAATGGAGAGAGAGAAAGCAGCAGAGAAGAAAAAGAGTCCTCGAAGAACAAATTAGGATTTTCTTCTCCTTTTTCGGTATATATATATATATATATATATATATATATATGTATATATGTATTTCAAATACTGAAACAACACTCCGGTTTTGCTAGTTCGTTCTTTTTACGTACGACTGAAAGCTCTCAATTCGTCAAGTTTTTTTTTTAAGCACCTAGTGATGAGAGTTTTGTTGTTTTCATTTCTATGAACTGATTTTGATTTTGTGAATTTTGATCTCTTGTTCTTCGTCGGAGAATCGTGCTTTCTCAGCTCCGGCGCCGCTGTGTACTGAATTGAGTATCCATGGTTAGGATTTGAGGAATTTGTGAAAGTTAGTGGAAGTAAATCGCCGTCTGAAAAATGGTTTCGAGTAATCGGGGGACGAATTCGCATCAGCAACAAGCAGAGTCCTCGAACACGAACACGAACACGAACACGAGCCATATGCGATCTAATCGTACAGAATCCATCAGCAAAGCCGTAGCGCAGTACACCATCGATGCTCGTCTTCACGCAGTGTTTGAACAGTCAGGTGAGTCCGGTAAATCTTTTGACTACTCACAATCTATTAGAACTTCGACACAATCTGTGCCGGAGCAGCAAATTACTGCTTATTTATCGATGATTCAAAGGGGCGGCCATATCCAGCCCTTTGGATGTATGATAGCCATCGATGAGGCAAATTTTCGGGTTATTGCTTATAGTGAAAACACTAGGGAATTGCTTGGTCTTACTCCTCAATCAGTGCCAAATCTTGAAAAGATAGAGATTCTCACAATTGGAACTGATGTACGGAACTTGTTCACTTCCAATAGTGCAATTTTGCTTGAGAAAGCATTTGGGGCTCGAGAAATCACTTTGTTAAACCCTGTTTGGGTTCATTCTAAGAATTCTTTGAAGCCATTTTATGCTATTTTGCATAGGATTGATGTCGGAATTGTGATTGATTTAGAGCCAGCAAGAACGGAGGATCCTGCCCTTTCTATTGCTGGGGCAGTCCAATCGCAAAAGCTTGCAGTGCGTGCAATTTCTAAGCTACAAGCACTCCCTGGTGGAGATATTAAACTGTTGTGTGATACTGTGGTTGAGAGTGTTAGGGAGCTTACTGGATACGATCGAGTTATGGTGTATAAGTTTCACGAAGACGAGCACGGTGAGGTTGTCGCTGAAAGCAAGAGGCCTGACTTAGAGCCATACATTGGATTGCATTATCCTTCTACTGATATTCCTCAGGCATCGAGGTTTTTGTTTAAGCAAAACCGTGTTAGAATGATTGTCGATTGCCATGCTTCTCCAGTTCGTGTAATTCAGGCTGCAGGGCTTATGCAACCTCTTTGCTTAGTGGGTTCGACTCTTCGTGCTCCCCATGGCTGTCATTCTCAGTATATGGCCAATATGGGCTCCATTTCGTCGTTAGCAATGGCGGTTGTTATCAATAATAACGACGACGAAGCTATTGGTGGGCGAAGTTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCACCATACTTCGGCTCGGTGTATTCCGTTCCCTCTCCGGTATGCATGTGAGTTTCTAATGCAAGCATTTGGACTTCAACTTAATATGGAATTGCAATTGGCTTCACAGATGTCTGAGAAACATGTTTTGAGAACTCAAACTCTTTTATGTGACATGCTTCTTCGTGATTCCCCAACTGGCATTATTACTCAGAGTCCAAGCATCATGGACTTAGTAAAGTGTGATGGGGCAGCTCTTTACTATCAAGGGAAGTATTACCCTCTAGGCGTGACGCCAACCGAAGCCCAAATAAAGGACGTCGTGGAATGGTTGCTAGCTTTCCATGGCGATTCAACTGGTTTAAGTACAGACAGCTTGGCCGATGCTGGCTATCCAGGGGCAGCCTTGCTTGGTGGTGCAGTTTGTGGAATGGATGTTGCCTATATCACCAAAAGGGATTTTCTCTTCTGGTTCCGATCGCACACAGGAAAAGAGATCAAGTGGGGCGGCGCAAAGCATCACCCAGCGGATAAGGACGATGGTCAAAGAATGCATCCACGTTCTTCGTTCAAGGCATTTCTAGAAGTAGTAAAATCGCGTAGTTTACCGTGGGAGACTGCAGAAATGGATGCTATTCACTCATTGCAGCTTATTCTTCGAGATTCATTCAAGGATAACGCTGCAATCAATTCGAAAACAGTTGTGCATCCTCAACTAGGGGATCTCAACTTGCAAGGGATCGATGAGCTCAGCTTGGTTGCTAGAGAAATGGTCAGGTTGATCGAGACTGCAACTGCTCCAATCTTTGCTGTAGATGTCGACAGCTGTATCAATGGATGGAACACTAAGATAGCAGAGTTGACTGGGCTTGCAGTCGAGGAAGCTATGGGGAAATCCCTAGTTCGTGATCTCGTGTATAAAGAATCTGAAGAAATAGTCGACAAACTCGTTTCCCGGGCTTTAAAAGGTAGGTAGCTCAGTTACTTATGGAGCTTTTTTGGTCTATATTATAGTTGTTTTATAAATGCAGGTGAAGAAGAAAAGAATATAGAGATAAAAATGAAGACATTTGGGCGAGATCCAGATGATCAAAGACAGCCAATTTTTGTGGCTGTCAATGCTTGTTCTAGCAGGGACTACACTGATAACATAGTAGGCGTTTGTTTTGTTGGTCAAGATCTTACCTGCCAAAAAGTGTTCATGGACAAATTTATTAGCATACAATGTGATTATAAAGCCATTGTTCATAGTCCCAGTCCTCTTATCCCTCCAATATTCGCTTCGGACGACAATACGTGTTGCTCGGAATGGAATACCGCCATGGAAAACCTCACCGGATGGTCCAGAGAAGACATAATTGGAAAAATGCTAGTAGGGGAGGTTTTTGGAGATTGTTGTAGACTGAAGGGGCCAGATGAATTGACCAAATTCATGATTGTCTTGCACGGTGCAATTGGAGGGAAGAACAATGAAAAATTCCCCTTTTCTTTTTATGACAAAAAGGGGAAATATGTGCAGGCTCTGTTGACAGCAAATAAGAGGATGAATATGGAGGGGCAGATTGTTGGAGCTTTCTGCTTTGTTCAGATTGCCAGTCTTGAATTGCAGCAAACTCTTAGAATGCAGAGGCAACAGGAGAAGAACCGGTTTGTAAGGATGAAAGAGCTGGCTTACATTTGCCAGGAAGTGAAGAGTCCTTTGAGTGGTATACGCTTTACTAACTCGCTTCTGGAGGCTACGGATTTGAGTGAAGACCAGAAGCAGTTTCTGGAGACCAGTGTTTCTTGTGAAAAGCAGATGTTAAAGATTATAGAAGATATGGATTTGGAAAGTATTGATGATGGGTGAGTTGTTCTTTAACAATTATCTGTCTATTATCGCGAGGTTTTATGTCACTTGAAGAGGGGAACAAAACATTCCTTATAAGGGTGTGGAGACCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGGTGATATGTAACGGCCCAAAGTGGATAACATTTGTTAGCGGTGGGCTTGGGCTATTACGAATGGTATCAGAGCCAGACACCGGGCAGTGTGTCAGTGAGGACACTGGCCCCCACGAGGGGGTGGATTGTGAGGTCCCACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGTAGCCTCTCCCTAGTAGACGCGTTTTAAAGGCATGAGGCTGACGACGATACATAAAGGGCCAAAACGGATTATATCTGCTAGCAGTGGGTTTGGGCTCTTACAAATGGTATCAGAGCTAGACATCGGGTGGTGTGCCAGCGAGGACGCTGGCCCCCAAGAGGGGTGGATTGTGAGGCCTCACATCGATTGGAGAGGGGAACAAAACATTTCATTTCTTATAAGGGTGTGGAAATCTCTCCCTAGTAGACGCATTTTAAAACCGTGAGGTTGATGATGATATGTAAGGAGCCAAAACGGACAGTATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGATATCAGAGTCAGACACCGAGCGGTGTGCCAGTGGAGACGCTGGCCCCTAAGAGGGGGTGGATTGTGAGATCCCACATCAGTTGGAAGGGGAACGAAACATTTCTTATAAGGGTGTGGAAAACTCTCCCTAGTAGACGCATTTTAAAACCATGAGACTGACAACCATATGTAAGAGGCCAAAGCGGACAATATCGGCTAGCAGTGGGCTTAGATGGTTACAATCATAGTAATTTTTATGCTAAATTGTTTATTTTAGGCTCGATCTTGCTACCTTTCTCCCCTGCTTTTTTGGATTTATGTAAACCATTCTCATTTGGCAATAACATGTCTCGAGAAGAGTAGCTAATTTTCTGATTTGTTTTGGAATCAGTACAATGGAGATTGAGAAGGGGGAGTTCTTACTGGGAAGTGTTATTAATGCTGTTGTTAGTCAAGCGATGTTACTACTCAGAGAAAGAAACTTACAACTGGTTCGTGATATACCAGAAGAAGTAAAGACTATGGCTGTATATGGCGATCAAGTGAGAATTCAACAGGTCTTAGCTGATTTCTTGTTGAACATGGTGCGTTACGCACCGTCTCCGGAAGGCTGGGTAGAATTACGTGTCTGTCCATTCCTGAAGCAAAACTCGGATCGACTTCGTCTCGCACGCACCGAATTCAGGTACTTTAATGTTCAATCATTCTTCCCAATATGTTTGAGCTGAAGATATTGGAAGTTGAACAAAAAGAACATGATGTAGATGTTAAAAATCACGAACCTCTACAATGGTATGATATTGTTCACTTCGAGCATAAATTCTCGTGGCTTTGCTTTTGGTTTCCCCAACAAGCCTCATACCAATGGAGATGGTATTACTTACTTATAAACCCGTGATCTTTCCTTAATTAGCCAATGTGGGACTCCCTCCCAACAATTCTTCTCTCGAACAAAGTATACCATAGAGTCTCGAGCAATCTCCCCTTAATCGAGGCTCGACTCCGTTTTTTGGAGCCCTCAAACACAATACACCATTTGTTCGACACTTAGGTCACTTTTGACTACATTTTCGAGGCTAGCCTCCCCTGAGACCTATGTAGTCCTCGAACAACCCCCCCTAATCGAGATTTGACTCTTTTTTTTGGAGCCCTTGAACAAAATACACCATTTGTTCGACACTTGAGTCACTTTTGACTATTCCTTCTAGGCTAGCCTCCCCTGAGGCCTATAGAGTCCTCGAACAACCTCCTCTTAATCAAGGCTCGACTCCTCCCCTCAAGCAAAATATACCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGTTCACAACTTCGTTGTTCGACATTTGAGGATTCTATTGACGTGGCTAAGTTAAGGGCATGACTCTGATACCATGTTGGGAATCACGAACCCTCCACAATGGTGTGATATTGTCCACTTTGAGCATAAACTCTCGTAACTTTGCTTTTAGTTTCCCCAAAAGGCCTCGTACCAATGGAGATAGTATTCTTTTACTTATAAATCAACGATCTTTTCCTTATAAATCAACGATCTTTTCCTTAATTAGCCATCGAACTCCCACTCAACAGTCCTTAATAGTTTAATAGTAAATGCATAGTTATTATGTTTCCTTGTTTCAACAATAGCATTAGTTCCATAAGCAAATGGCTAACATATGTTACTATGATGAAGGATTGTATGCCCTGGGGAAGGTCTACCTCCTGAGTTGATACAGGACATGTTTCACAGTGGGCGATGGGCGACTCAAGAAGGATTAGGGTTGAGCATGTGCAGAAAGATTCTGAAGCTCATGAATGGTGAAGTCCAATACATCAGAGAATCTGAAAGATGTTATTTCTCGATCACTCTCGAACTCCCTTTAACAGAGAGAGCCCTCGGCGACATCGGTTAGCTTCTTTGACCATATACTCGTGTAGTTTTCCAGCCATTGTTTATGAGCAAAGCTCCGAGCATACACGTCGTCGTCGTCGAAGCCATGTGATATAATTGGTAGGTGAATAAAGATTGTTTATGCTTGTGTTTATGTACATCACAACTTTGGGTAGATTATTTTTGCTTAGGTTTTGTAAAGTGGATAATTTGTTTTTTTTGTTTTTTTTTT

mRNA sequence

CAGAGAGGCGAGAGAAGCCACAGAGAGAATGGAGAGAGAGAAAGCAGCAGAGAAGAAAAAGAGTCCTCGAAGAACAAATTAGGATTTTCTTCTCCTTTTTCGGTATATATATATATATATATATATATATATATATGTATATATGTATTTCAAATACTGAAACAACACTCCGGTTTTGCTAGTTCGTTCTTTTTACGTACGACTGAAAGCTCTCAATTCGTCAAGTTTTTTTTTTAAGCACCTAGTGATGAGAGTTTTGTTGTTTTCATTTCTATGAACTGATTTTGATTTTGTGAATTTTGATCTCTTGTTCTTCGTCGGAGAATCGTGCTTTCTCAGCTCCGGCGCCGCTGTGTACTGAATTGAGTATCCATGGTTAGGATTTGAGGAATTTGTGAAAGTTAGTGGAAGTAAATCGCCGTCTGAAAAATGGTTTCGAGTAATCGGGGGACGAATTCGCATCAGCAACAAGCAGAGTCCTCGAACACGAACACGAACACGAACACGAGCCATATGCGATCTAATCGTACAGAATCCATCAGCAAAGCCGTAGCGCAGTACACCATCGATGCTCGTCTTCACGCAGTGTTTGAACAGTCAGGTGAGTCCGGTAAATCTTTTGACTACTCACAATCTATTAGAACTTCGACACAATCTGTGCCGGAGCAGCAAATTACTGCTTATTTATCGATGATTCAAAGGGGCGGCCATATCCAGCCCTTTGGATGTATGATAGCCATCGATGAGGCAAATTTTCGGGTTATTGCTTATAGTGAAAACACTAGGGAATTGCTTGGTCTTACTCCTCAATCAGTGCCAAATCTTGAAAAGATAGAGATTCTCACAATTGGAACTGATGTACGGAACTTGTTCACTTCCAATAGTGCAATTTTGCTTGAGAAAGCATTTGGGGCTCGAGAAATCACTTTGTTAAACCCTGTTTGGGTTCATTCTAAGAATTCTTTGAAGCCATTTTATGCTATTTTGCATAGGATTGATGTCGGAATTGTGATTGATTTAGAGCCAGCAAGAACGGAGGATCCTGCCCTTTCTATTGCTGGGGCAGTCCAATCGCAAAAGCTTGCAGTGCGTGCAATTTCTAAGCTACAAGCACTCCCTGGTGGAGATATTAAACTGTTGTGTGATACTGTGGTTGAGAGTGTTAGGGAGCTTACTGGATACGATCGAGTTATGGTGTATAAGTTTCACGAAGACGAGCACGGTGAGGTTGTCGCTGAAAGCAAGAGGCCTGACTTAGAGCCATACATTGGATTGCATTATCCTTCTACTGATATTCCTCAGGCATCGAGGTTTTTGTTTAAGCAAAACCGTGTTAGAATGATTGTCGATTGCCATGCTTCTCCAGTTCGTGTAATTCAGGCTGCAGGGCTTATGCAACCTCTTTGCTTAGTGGGTTCGACTCTTCGTGCTCCCCATGGCTGTCATTCTCAGTATATGGCCAATATGGGCTCCATTTCGTCGTTAGCAATGGCGGTTGTTATCAATAATAACGACGACGAAGCTATTGGTGGGCGAAGTTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCACCATACTTCGGCTCGGTGTATTCCGTTCCCTCTCCGGTATGCATGTGAGTTTCTAATGCAAGCATTTGGACTTCAACTTAATATGGAATTGCAATTGGCTTCACAGATGTCTGAGAAACATGTTTTGAGAACTCAAACTCTTTTATGTGACATGCTTCTTCGTGATTCCCCAACTGGCATTATTACTCAGAGTCCAAGCATCATGGACTTAGTAAAGTGTGATGGGGCAGCTCTTTACTATCAAGGGAAGTATTACCCTCTAGGCGTGACGCCAACCGAAGCCCAAATAAAGGACGTCGTGGAATGGTTGCTAGCTTTCCATGGCGATTCAACTGGTTTAAGTACAGACAGCTTGGCCGATGCTGGCTATCCAGGGGCAGCCTTGCTTGGTGGTGCAGTTTGTGGAATGGATGTTGCCTATATCACCAAAAGGGATTTTCTCTTCTGGTTCCGATCGCACACAGGAAAAGAGATCAAGTGGGGCGGCGCAAAGCATCACCCAGCGGATAAGGACGATGGTCAAAGAATGCATCCACGTTCTTCGTTCAAGGCATTTCTAGAAGTAGTAAAATCGCGTAGTTTACCGTGGGAGACTGCAGAAATGGATGCTATTCACTCATTGCAGCTTATTCTTCGAGATTCATTCAAGGATAACGCTGCAATCAATTCGAAAACAGTTGTGCATCCTCAACTAGGGGATCTCAACTTGCAAGGGATCGATGAGCTCAGCTTGGTTGCTAGAGAAATGGTCAGGTTGATCGAGACTGCAACTGCTCCAATCTTTGCTGTAGATGTCGACAGCTGTATCAATGGATGGAACACTAAGATAGCAGAGTTGACTGGGCTTGCAGTCGAGGAAGCTATGGGGAAATCCCTAGTTCGTGATCTCGTGTATAAAGAATCTGAAGAAATAGTCGACAAACTCGTTTCCCGGGCTTTAAAAGGTGAAGAAGAAAAGAATATAGAGATAAAAATGAAGACATTTGGGCGAGATCCAGATGATCAAAGACAGCCAATTTTTGTGGCTGTCAATGCTTGTTCTAGCAGGGACTACACTGATAACATAGTAGGCGTTTGTTTTGTTGGTCAAGATCTTACCTGCCAAAAAGTGTTCATGGACAAATTTATTAGCATACAATGTGATTATAAAGCCATTGTTCATAGTCCCAGTCCTCTTATCCCTCCAATATTCGCTTCGGACGACAATACGTGTTGCTCGGAATGGAATACCGCCATGGAAAACCTCACCGGATGGTCCAGAGAAGACATAATTGGAAAAATGCTAGTAGGGGAGGTTTTTGGAGATTGTTGTAGACTGAAGGGGCCAGATGAATTGACCAAATTCATGATTGTCTTGCACGGTGCAATTGGAGGGAAGAACAATGAAAAATTCCCCTTTTCTTTTTATGACAAAAAGGGGAAATATGTGCAGGCTCTGTTGACAGCAAATAAGAGGATGAATATGGAGGGGCAGATTGTTGGAGCTTTCTGCTTTGTTCAGATTGCCAGTCTTGAATTGCAGCAAACTCTTAGAATGCAGAGGCAACAGGAGAAGAACCGGTTTGTAAGGATGAAAGAGCTGGCTTACATTTGCCAGGAAGTGAAGAGTCCTTTGAGTGGTATACGCTTTACTAACTCGCTTCTGGAGGCTACGGATTTGAGTGAAGACCAGAAGCAGTTTCTGGAGACCAGTGTTTCTTGTGAAAAGCAGATTACAATGGAGATTGAGAAGGGGGAGTTCTTACTGGGAAGTGTTATTAATGCTGTTGTTAGTCAAGCGATGTTACTACTCAGAGAAAGAAACTTACAACTGGTTCGTGATATACCAGAAGAAGTAAAGACTATGGCTGTATATGGCGATCAAGTGAGAATTCAACAGGTCTTAGCTGATTTCTTGTTGAACATGGTGCGTTACGCACCGTCTCCGGAAGGCTGGGTAGAATTACGTGTCTGTCCATTCCTGAAGCAAAACTCGGATCGACTTCGTCTCGCACGCACCGAATTCAGGATTGTATGCCCTGGGGAAGGTCTACCTCCTGAGTTGATACAGGACATGTTTCACAGTGGGCGATGGGCGACTCAAGAAGGATTAGGGTTGAGCATGTGCAGAAAGATTCTGAAGCTCATGAATGGTGAAGTCCAATACATCAGAGAATCTGAAAGATGTTATTTCTCGATCACTCTCGAACTCCCTTTAACAGAGAGAGCCCTCGGCGACATCGGTTAGCTTCTTTGACCATATACTCGTGTAGTTTTCCAGCCATTGTTTATGAGCAAAGCTCCGAGCATACACGTCGTCGTCGTCGAAGCCATGTGATATAATTGGTAGGTGAATAAAGATTGTTTATGCTTGTGTTTATGTACATCACAACTTTGGGTAGATTATTTTTGCTTAGGTTTTGTAAAGTGGATAATTTGTTTTTTTTGTTTTTTTTTT

Coding sequence (CDS)

ATGGTTTCGAGTAATCGGGGGACGAATTCGCATCAGCAACAAGCAGAGTCCTCGAACACGAACACGAACACGAACACGAGCCATATGCGATCTAATCGTACAGAATCCATCAGCAAAGCCGTAGCGCAGTACACCATCGATGCTCGTCTTCACGCAGTGTTTGAACAGTCAGGTGAGTCCGGTAAATCTTTTGACTACTCACAATCTATTAGAACTTCGACACAATCTGTGCCGGAGCAGCAAATTACTGCTTATTTATCGATGATTCAAAGGGGCGGCCATATCCAGCCCTTTGGATGTATGATAGCCATCGATGAGGCAAATTTTCGGGTTATTGCTTATAGTGAAAACACTAGGGAATTGCTTGGTCTTACTCCTCAATCAGTGCCAAATCTTGAAAAGATAGAGATTCTCACAATTGGAACTGATGTACGGAACTTGTTCACTTCCAATAGTGCAATTTTGCTTGAGAAAGCATTTGGGGCTCGAGAAATCACTTTGTTAAACCCTGTTTGGGTTCATTCTAAGAATTCTTTGAAGCCATTTTATGCTATTTTGCATAGGATTGATGTCGGAATTGTGATTGATTTAGAGCCAGCAAGAACGGAGGATCCTGCCCTTTCTATTGCTGGGGCAGTCCAATCGCAAAAGCTTGCAGTGCGTGCAATTTCTAAGCTACAAGCACTCCCTGGTGGAGATATTAAACTGTTGTGTGATACTGTGGTTGAGAGTGTTAGGGAGCTTACTGGATACGATCGAGTTATGGTGTATAAGTTTCACGAAGACGAGCACGGTGAGGTTGTCGCTGAAAGCAAGAGGCCTGACTTAGAGCCATACATTGGATTGCATTATCCTTCTACTGATATTCCTCAGGCATCGAGGTTTTTGTTTAAGCAAAACCGTGTTAGAATGATTGTCGATTGCCATGCTTCTCCAGTTCGTGTAATTCAGGCTGCAGGGCTTATGCAACCTCTTTGCTTAGTGGGTTCGACTCTTCGTGCTCCCCATGGCTGTCATTCTCAGTATATGGCCAATATGGGCTCCATTTCGTCGTTAGCAATGGCGGTTGTTATCAATAATAACGACGACGAAGCTATTGGTGGGCGAAGTTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCACCATACTTCGGCTCGGTGTATTCCGTTCCCTCTCCGGTATGCATGTGAGTTTCTAATGCAAGCATTTGGACTTCAACTTAATATGGAATTGCAATTGGCTTCACAGATGTCTGAGAAACATGTTTTGAGAACTCAAACTCTTTTATGTGACATGCTTCTTCGTGATTCCCCAACTGGCATTATTACTCAGAGTCCAAGCATCATGGACTTAGTAAAGTGTGATGGGGCAGCTCTTTACTATCAAGGGAAGTATTACCCTCTAGGCGTGACGCCAACCGAAGCCCAAATAAAGGACGTCGTGGAATGGTTGCTAGCTTTCCATGGCGATTCAACTGGTTTAAGTACAGACAGCTTGGCCGATGCTGGCTATCCAGGGGCAGCCTTGCTTGGTGGTGCAGTTTGTGGAATGGATGTTGCCTATATCACCAAAAGGGATTTTCTCTTCTGGTTCCGATCGCACACAGGAAAAGAGATCAAGTGGGGCGGCGCAAAGCATCACCCAGCGGATAAGGACGATGGTCAAAGAATGCATCCACGTTCTTCGTTCAAGGCATTTCTAGAAGTAGTAAAATCGCGTAGTTTACCGTGGGAGACTGCAGAAATGGATGCTATTCACTCATTGCAGCTTATTCTTCGAGATTCATTCAAGGATAACGCTGCAATCAATTCGAAAACAGTTGTGCATCCTCAACTAGGGGATCTCAACTTGCAAGGGATCGATGAGCTCAGCTTGGTTGCTAGAGAAATGGTCAGGTTGATCGAGACTGCAACTGCTCCAATCTTTGCTGTAGATGTCGACAGCTGTATCAATGGATGGAACACTAAGATAGCAGAGTTGACTGGGCTTGCAGTCGAGGAAGCTATGGGGAAATCCCTAGTTCGTGATCTCGTGTATAAAGAATCTGAAGAAATAGTCGACAAACTCGTTTCCCGGGCTTTAAAAGGTGAAGAAGAAAAGAATATAGAGATAAAAATGAAGACATTTGGGCGAGATCCAGATGATCAAAGACAGCCAATTTTTGTGGCTGTCAATGCTTGTTCTAGCAGGGACTACACTGATAACATAGTAGGCGTTTGTTTTGTTGGTCAAGATCTTACCTGCCAAAAAGTGTTCATGGACAAATTTATTAGCATACAATGTGATTATAAAGCCATTGTTCATAGTCCCAGTCCTCTTATCCCTCCAATATTCGCTTCGGACGACAATACGTGTTGCTCGGAATGGAATACCGCCATGGAAAACCTCACCGGATGGTCCAGAGAAGACATAATTGGAAAAATGCTAGTAGGGGAGGTTTTTGGAGATTGTTGTAGACTGAAGGGGCCAGATGAATTGACCAAATTCATGATTGTCTTGCACGGTGCAATTGGAGGGAAGAACAATGAAAAATTCCCCTTTTCTTTTTATGACAAAAAGGGGAAATATGTGCAGGCTCTGTTGACAGCAAATAAGAGGATGAATATGGAGGGGCAGATTGTTGGAGCTTTCTGCTTTGTTCAGATTGCCAGTCTTGAATTGCAGCAAACTCTTAGAATGCAGAGGCAACAGGAGAAGAACCGGTTTGTAAGGATGAAAGAGCTGGCTTACATTTGCCAGGAAGTGAAGAGTCCTTTGAGTGGTATACGCTTTACTAACTCGCTTCTGGAGGCTACGGATTTGAGTGAAGACCAGAAGCAGTTTCTGGAGACCAGTGTTTCTTGTGAAAAGCAGATTACAATGGAGATTGAGAAGGGGGAGTTCTTACTGGGAAGTGTTATTAATGCTGTTGTTAGTCAAGCGATGTTACTACTCAGAGAAAGAAACTTACAACTGGTTCGTGATATACCAGAAGAAGTAAAGACTATGGCTGTATATGGCGATCAAGTGAGAATTCAACAGGTCTTAGCTGATTTCTTGTTGAACATGGTGCGTTACGCACCGTCTCCGGAAGGCTGGGTAGAATTACGTGTCTGTCCATTCCTGAAGCAAAACTCGGATCGACTTCGTCTCGCACGCACCGAATTCAGGATTGTATGCCCTGGGGAAGGTCTACCTCCTGAGTTGATACAGGACATGTTTCACAGTGGGCGATGGGCGACTCAAGAAGGATTAGGGTTGAGCATGTGCAGAAAGATTCTGAAGCTCATGAATGGTGAAGTCCAATACATCAGAGAATCTGAAAGATGTTATTTCTCGATCACTCTCGAACTCCCTTTAACAGAGAGAGCCCTCGGCGACATCGGTTAG

Protein sequence

MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINNNDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQITMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALGDIG

Homology

[Close]

BLAST of Cp4.1LG08g05280 vs. Swiss-Prot
Match: PHYB_TOBAC (Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2)

HSP 1 Score: 1821.2 bits (4716), Expect = 0.0e+00
Identity = 906/1143 (79.27%), Postives = 1014/1143 (88.71%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQ-----QAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFE 60
            M S +R  +SHQ      QA+SS T+          N  +SISKA+AQYT DARLHAVFE
Sbjct: 1    MASGSRTKHSHQSGQGQVQAQSSGTSN--------VNYKDSISKAIAQYTADARLHAVFE 60

Query: 61   QSGESGKSFDYSQSIRTSTQS-VPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAY 120
            QSGESGKSFDYSQSI+T+TQS VPEQQITAYL+ IQRGGHIQPFGCMIA+DEA+FRVIAY
Sbjct: 61   QSGESGKSFDYSQSIKTTTQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAY 120

Query: 121  SENTRELLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVH 180
            SEN  E+L LTPQSVP+LE+ EILT+GTDVR LFT +S++LLE+AFGAREITLLNP+W+H
Sbjct: 121  SENACEMLSLTPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIH 180

Query: 181  SKNSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDI 240
            SKNS KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGD+
Sbjct: 181  SKNSGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDV 240

Query: 241  KLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASR 300
            KLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESK PDLEPYIGLHYP+TDIPQASR
Sbjct: 241  KLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASR 300

Query: 301  FLFKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAM 360
            FLFKQNRVRMIVDCHA+PVRV+Q   LMQPLCLVGSTLRAPHGCH+QYMANMGSI+SL +
Sbjct: 301  FLFKQNRVRMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTL 360

Query: 361  AVVINNNDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLA 420
            AV+IN ND+EA+GGRSS RLWGLVV HHTSARCIPFPLRYACEFLMQAFGLQLNMELQLA
Sbjct: 361  AVIINGNDEEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLA 420

Query: 421  SQMSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 480
            SQ+SEKHVLRTQTLLCDMLLRDSPTGI+ QSPSIMDLVKCDGAALY QGKYYPLGVTPTE
Sbjct: 421  SQLSEKHVLRTQTLLCDMLLRDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTE 480

Query: 481  AQIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSH 540
            AQIKD+VEWLL +HGDSTGLSTDSLADAGYPGAALLG AVCGM VAYIT +DFLFWFRSH
Sbjct: 481  AQIKDIVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSH 540

Query: 541  TGKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRD 600
            T KEIKWGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSL LILRD
Sbjct: 541  TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRD 600

Query: 601  SFKDNAAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWN 660
            SFKD  A NSK VVH QLG++ LQGIDELS VAREMVRLIETATAPIFAVDV+  INGWN
Sbjct: 601  SFKDAEASNSKAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWN 660

Query: 661  TKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPD 720
             K+AELT L+VEEAMGKSLV DLV+KES+E  +KL+  AL+GEE+KN+EIK++TFG  P+
Sbjct: 661  AKVAELTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFG--PE 720

Query: 721  DQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLI 780
              ++ +FV VNACSS+DYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLI
Sbjct: 721  QLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLI 780

Query: 781  PPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLH 840
            PPIFASD+NTCCSEWNTAME LTGWSR +IIGKMLVGE+FG CCRLKGPD +TKFMIVLH
Sbjct: 781  PPIFASDENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLH 840

Query: 841  GAIGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQ 900
             AIG ++ +KFPFSF+D+ GKYVQALLTANKR+NMEGQI+GAFCF+QIAS ELQQ LR+Q
Sbjct: 841  NAIGVQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQ 900

Query: 901  RQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI-- 960
            RQQEK  + +MKELAY+CQE+KSPL+GIRFTNSLLEATDL+E+QKQ+LETS +CE+Q+  
Sbjct: 901  RQQEKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSK 960

Query: 961  -------------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVY 1020
                         ++ +EK EF LGSVI+AVVSQ MLLLRER++QL+RDIPEE+KT+ V+
Sbjct: 961  IIRDVDLENIEDGSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVH 1020

Query: 1021 GDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLP 1080
            GDQVRIQQVLADFLLNMVRYAPSP+GWVE+++ P +KQ SD + +   EFRIVCPGEGLP
Sbjct: 1021 GDQVRIQQVLADFLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLP 1080

Query: 1081 PELIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALG 1123
            PEL+QDMFHS RW T+EGLGLSMCRKILKLMNG++QYIRESERCYF I L+LP+T R   
Sbjct: 1081 PELVQDMFHSSRWVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRRGSK 1132

[Close]

BLAST of Cp4.1LG08g05280 vs. Swiss-Prot
Match: PHYB_SOLTU (Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2)

HSP 1 Score: 1799.6 bits (4660), Expect = 0.0e+00
Identity = 886/1138 (77.86%), Postives = 1003/1138 (88.14%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            M S +R  +SH   +++ ++ T+        N  +SISKA+AQYT DARLHAVFEQSGES
Sbjct: 1    MASGSRTKHSHHSSSQAQSSGTSN------VNYKDSISKAIAQYTADARLHAVFEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GK FDYSQS++T+TQSVPE+QITAYL+ IQRGGHIQPFGCMIA+DEA+FRVIAYSEN  E
Sbjct: 61   GKFFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            +L LTPQSVP+LEK EILTIGTDVR LFT +S++LLE+AFGAREITLLNP+W+HSKNS K
Sbjct: 121  MLSLTPQSVPSLEKCEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDIKLLCDT
Sbjct: 181  PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDT 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVESVRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQN
Sbjct: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHA+PVRV Q   LMQPLCLVGSTLRAPHGCH+QYMANMGSI+SL +AV+IN 
Sbjct: 301  RVRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIING 360

Query: 361  NDDEAIGG-RSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSE 420
            ND+EA+GG R+S RLWGLVV HHTS R IPFPLRYACEFLMQAFGLQLNMELQLASQ+SE
Sbjct: 361  NDEEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 420

Query: 421  KHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD 480
            KHVLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD
Sbjct: 421  KHVLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD 480

Query: 481  VVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEI 540
            +VEWLLA+HGDSTGLSTDSL DAGYPGAA LG AVCGM VAYIT +DFLFWFRSHT KEI
Sbjct: 481  IVEWLLAYHGDSTGLSTDSLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEI 540

Query: 541  KWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDN 600
            KWGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRS PWE AEMDAIHSLQLILRDSFKD 
Sbjct: 541  KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDA 600

Query: 601  AAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAE 660
             A NSK +VH  LG++ LQGIDELS VAREMVRLIETATAPIFAVDV+  INGWN K+AE
Sbjct: 601  EASNSKAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 660

Query: 661  LTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQP 720
            LTG++VEEAMGKSLV DLVYKES+E  +KL+  AL+GEE+KN+EIK++TFG   +   + 
Sbjct: 661  LTGVSVEEAMGKSLVHDLVYKESQETAEKLLYNALRGEEDKNVEIKLRTFG--AEQLEKA 720

Query: 721  IFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFA 780
            +FV VNAC+S+DYT+NIVGVCFVGQD+T +KV MDKFI+IQ DYKAIVHSP+PLIPPIFA
Sbjct: 721  VFVVVNACASKDYTNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFA 780

Query: 781  SDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGG 840
            SD+NTCCSEWNTAME LTGWSR +I+GKMLVGE+FG CCRLKGPD +TKFMIVLH AIGG
Sbjct: 781  SDENTCCSEWNTAMEKLTGWSRGEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGG 840

Query: 841  KNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEK 900
            ++ +KFPFSF+D+ GKYVQALLTANKR+NMEG  +GAFCF+QIAS ELQQ LR+QRQQEK
Sbjct: 841  QDTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEK 900

Query: 901  NRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI------- 960
              + +MKELAYICQE+KSPL+GIRFTNSLLEAT+L+E+QKQ+LETS +CE+Q+       
Sbjct: 901  KCYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDI 960

Query: 961  --------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVR 1020
                    ++ +EK +F LGSVI+AVVSQ MLLLRE+ +QL+RDIPEE+KT+ V+GDQVR
Sbjct: 961  DLENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVR 1020

Query: 1021 IQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQ 1080
            IQQVLADFLLNMVRYAPSP+GWVE+++ P +   SD + +   E RI+CPGEGLPPEL+Q
Sbjct: 1021 IQQVLADFLLNMVRYAPSPDGWVEIQLRPSMMPISDGVTVVHIELRIICPGEGLPPELVQ 1080

Query: 1081 DMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALGDIG 1123
            DMFHS RW TQEGLGLSMCRK+LKLMNGE+QYIRESERCYF I L+LP+T +    +G
Sbjct: 1081 DMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFLIILDLPMTRKGPKSVG 1130

[Close]

BLAST of Cp4.1LG08g05280 vs. Swiss-Prot
Match: PHYB1_SOLLC (Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1)

HSP 1 Score: 1773.8 bits (4593), Expect = 0.0e+00
Identity = 879/1130 (77.79%), Postives = 990/1130 (87.61%), Query Frame = 1


Query: 9    NSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQ 68
            NS Q QA+SS T+          N  +SISKA+AQYT DARLHAVFEQSGESGKSFDYSQ
Sbjct: 13   NSSQGQAQSSGTSN--------MNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQ 72

Query: 69   SIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQS 128
            S++T+TQSVPE+QITAYL+ IQRGGHIQPFGCMIA+DEA+FR+IAYSEN  E+L LTPQS
Sbjct: 73   SVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEMLSLTPQS 132

Query: 129  VPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLKPFYAILHR 188
            VP+L+K EILT+GTDVR LFT +S++LLE+AFGAREITLLNP+W+HSKNS KPFYAILHR
Sbjct: 133  VPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHR 192

Query: 189  IDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDTVVESVREL 248
            +DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDIKLLCDTVVESVREL
Sbjct: 193  VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVREL 252

Query: 249  TGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDC 308
            TGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQNRVRMIVDC
Sbjct: 253  TGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDC 312

Query: 309  HASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINNNDDEAIGG 368
            HA+PVRV Q   LMQPLCLVGSTLRAPHGCH+QYMANMGSI+SL +AV+IN ND+EA+GG
Sbjct: 313  HATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGG 372

Query: 369  -RSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLRTQT 428
             R+S RLWGLVV HHTS R IPFPLRYACEFLMQAFGLQLNMELQLASQ+SEKHVLRTQT
Sbjct: 373  GRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQT 432

Query: 429  LLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAF 488
            LLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQ KYYPLGVTPTEAQIKD+VEWLLA+
Sbjct: 433  LLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIVEWLLAY 492

Query: 489  HGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHH 548
            HGDSTGLSTDSLADAGYPGAA LG AVCGM VAYIT +DFLFWFRSHT KEIKWGGAKHH
Sbjct: 493  HGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHH 552

Query: 549  PADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKTV 608
            P DKDDGQRMHPRSSFKAFLEVVKSRS PWE AEMDAIHSLQLILRDSFKD  A NSK +
Sbjct: 553  PEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAI 612

Query: 609  VHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAELTGLAVEE 668
            VH  LG++ LQGIDELS VAREMVRLIETATAPIF VDV+  INGWN K+ ELTGL+ EE
Sbjct: 613  VHA-LGEMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELTGLSAEE 672

Query: 669  AMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNAC 728
            A GKSLV DL+YKES+E  +KL+  AL+G E KN+EIK++TFG   +   + +F+ VNAC
Sbjct: 673  AKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFG--AEQVEKAVFLVVNAC 732

Query: 729  SSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFASDDNTCCS 788
            SSRDYT++IVGV FVGQD+T +K+ MDKFI IQ DYKAIVHSP+PLIPPIFASD+NT CS
Sbjct: 733  SSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTSCS 792

Query: 789  EWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGKNNEKFPF 848
            EWNTAME L+GWSRE+I+GKMLVGE+FG CCRLKGPD +TKFMIVLH AIGG++ +KFPF
Sbjct: 793  EWNTAMEKLSGWSREEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPF 852

Query: 849  SFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKNRFVRMKE 908
            SF+D+ GKYVQALLTANKR+NMEG  +GAFCF+QIAS ELQQ LR+QRQQEK  + +MKE
Sbjct: 853  SFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKE 912

Query: 909  LAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI--------------- 968
            LAYICQEVKSPL+GIRFTNSLLEAT+L+E QKQ+LETS +CE+Q+               
Sbjct: 913  LAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLENIEDG 972

Query: 969  TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADF 1028
            ++ +EK +F LGSVI+AVVSQ MLLLRE+ +QL+RDIPEE+KT+ V+GDQVRIQQVLADF
Sbjct: 973  SLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADF 1032

Query: 1029 LLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQDMFHSGRW 1088
            LLNMVRYAPSP+GWVE+++ P +   SD   +   E RI+CPGEGLPPEL+QDMFHS RW
Sbjct: 1033 LLNMVRYAPSPDGWVEIQLRPSMMPISDGATVVHIELRIICPGEGLPPELVQDMFHSSRW 1092

Query: 1089 ATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALGDIG 1123
             TQEGLGLSMCRK+LKLMNGE+QYIRESERCYF I L+LP+T +    +G
Sbjct: 1093 VTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDLPMTRKGPKSVG 1131

[Close]

BLAST of Cp4.1LG08g05280 vs. Swiss-Prot
Match: PHYB_ARATH (Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1)

HSP 1 Score: 1706.8 bits (4419), Expect = 0.0e+00
Identity = 863/1140 (75.70%), Postives = 980/1140 (85.96%), Query Frame = 1


Query: 3    SSNRGTNSHQ--QQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 62
            SS+   N+ +  +QA+SS T +       RSN TES+SKA+ QYT+DARLHAVFEQSGES
Sbjct: 23   SSSHTPNNRRGGEQAQSSGTKS----LRPRSN-TESMSKAIQQYTVDARLHAVFEQSGES 82

Query: 63   GKSFDYSQSIRTST--QSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENT 122
            GKSFDYSQS++T+T   SVPEQQITAYLS IQRGG+IQPFGCMIA+DE++FR+I YSEN 
Sbjct: 83   GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENA 142

Query: 123  RELLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNS 182
            RE+LG+ PQSVP LEK EIL +GTDVR+LFTS+S+ILLE+AF AREITLLNPVW+HSKN+
Sbjct: 143  REMLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNT 202

Query: 183  LKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLC 242
             KPFYAILHRIDVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLC
Sbjct: 203  GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLC 262

Query: 243  DTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFK 302
            DTVVESVR+LTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFK
Sbjct: 263  DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 322

Query: 303  QNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVI 362
            QNRVRMIVDC+A+PV V+Q   L Q +CLVGSTLRAPHGCHSQYMANMGSI+SLAMAV+I
Sbjct: 323  QNRVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 382

Query: 363  NNNDDEA---IGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAS 422
            N N+D+      GRSS RLWGLVVCHHTS+RCIPFPLRYACEFLMQAFGLQLNMELQLA 
Sbjct: 383  NGNEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 442

Query: 423  QMSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEA 482
            QMSEK VLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAA  Y GKYYPLGV P+E 
Sbjct: 443  QMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEV 502

Query: 483  QIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHT 542
            QIKDVVEWLLA H DSTGLSTDSL DAGYPGAA LG AVCGM VAYITKRDFLFWFRSHT
Sbjct: 503  QIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 562

Query: 543  GKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDS 602
             KEIKWGGAKHHP DKDDGQRMHPRSSF+AFLEVVKSRS PWETAEMDAIHSLQLILRDS
Sbjct: 563  AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 622

Query: 603  FKDN-AAINSKTV---VHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCIN 662
            FK++ AA+NSK V   V P       QGIDEL  VAREMVRLIETAT PIFAVD   CIN
Sbjct: 623  FKESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCIN 682

Query: 663  GWNTKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGR 722
            GWN KIAELTGL+VEEAMGKSLV DL+YKE+E  V+KL+SRAL+G+EEKN+E+K+KTF  
Sbjct: 683  GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFS- 742

Query: 723  DPDDQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPS 782
             P+ Q + +FV VNACSS+DY +NIVGVCFVGQD+T QK+ MDKFI+IQ DYKAIVHSP+
Sbjct: 743  -PELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPN 802

Query: 783  PLIPPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMI 842
            PLIPPIFA+D+NTCC EWN AME LTGWSR ++IGKM+VGEVFG CC LKGPD LTKFMI
Sbjct: 803  PLIPPIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMI 862

Query: 843  VLHGAIGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTL 902
            VLH AIGG++ +KFPF F+D+ GK+VQALLTANKR+++EG+++GAFCF+QI S ELQQ L
Sbjct: 863  VLHNAIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQAL 922

Query: 903  RMQRQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQ 962
             +QR+Q+   F + KELAYICQ +K+PLSG+RF NSLLEATDL+EDQKQ LETSVSCEKQ
Sbjct: 923  AVQRRQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQ 982

Query: 963  IT-----MEIE----------KGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTM 1022
            I+     M++E          + EF LGSVINA+VSQAM LLR+R LQL+RDIPEE+K++
Sbjct: 983  ISRIVGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSI 1042

Query: 1023 AVYGDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGE 1082
             V+GDQ+RIQQ+LA+FLL+++RYAPS E WVE+ +    KQ +D     RTEFR+ CPGE
Sbjct: 1043 EVFGDQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGE 1102

Query: 1083 GLPPELIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            GLPPEL++DMFHS RW + EGLGLS+CRKILKLMNGEVQYIRESER YF I LELP+  +
Sbjct: 1103 GLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1154

[Close]

BLAST of Cp4.1LG08g05280 vs. Swiss-Prot
Match: PHYB_ORYSI (Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2)

HSP 1 Score: 1675.6 bits (4338), Expect = 0.0e+00
Identity = 832/1112 (74.82%), Postives = 952/1112 (85.61%), Query Frame = 1


Query: 35   ESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGH 94
            ES+SKAVAQYT+DARLHAVFEQSG SG+SFDY+QS+R S     EQQI AYLS IQRGGH
Sbjct: 56   ESVSKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGH 115

Query: 95   IQPFGCMIAI-DEANFRVIAYSENTRELLGLTPQ-SVPNLEKIEI---LTIGTDVRNLFT 154
            IQPFGC +A+ D+++FR++AYSENT +LL L+P  SVP+L+   +   +++G D R LF 
Sbjct: 116  IQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFA 175

Query: 155  SNSAILLEKAFGAREITLLNPVWVHSKNSLKPFYAILHRIDVGIVIDLEPARTEDPALSI 214
             +SA+LLE+AF AREI+LLNP+W+HS+ S KPFYAILHRIDVG+VIDLEPARTEDPALSI
Sbjct: 176  PSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSI 235

Query: 215  AGAVQSQKLAVRAISKLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVA 274
            AGAVQSQKLAVRAIS+LQALPGGD+KLLCDTVVE VRELTGYDRVMVY+FHEDEHGEVVA
Sbjct: 236  AGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVA 295

Query: 275  ESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVG 334
            ES+R +LEPYIGLHYP+TDIPQASRFLF+QNRVRMI DCHA+PVRVIQ   L QPLCLVG
Sbjct: 296  ESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVG 355

Query: 335  STLRAPHGCHSQYMANMGSISSLAMAVVINN--NDDEAIGGRS---STRLWGLVVCHHTS 394
            STLR+PHGCH+QYMANMGSI+SL MAV+I++  +DD  I   S   + +LWGLVVCHHTS
Sbjct: 356  STLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTS 415

Query: 395  ARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLRTQTLLCDMLLRDSPTGIITQ 454
             RCIPFPLRYACEFLMQAFGLQLNMELQLA Q+SEKH+LRTQTLLCDMLLRDSPTGI+TQ
Sbjct: 416  PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475

Query: 455  SPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGDSTGLSTDSLADAGY 514
            SPSIMDLVKCDGAALYY GKYYPLGVTPTE QIKD++EWL   HGDSTGLSTDSLADAGY
Sbjct: 476  SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535

Query: 515  PGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPADKDDGQRMHPRSSFK 574
            PGAA LG AV GM VAYIT  D+LFWFRSHT KEIKWGGAKHHP DKDDGQRMHPRSSFK
Sbjct: 536  PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595

Query: 575  AFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNA--AINSKTVVH--PQLGDLNLQGI 634
            AFLEVVKSRSLPWE AEMDAIHSLQLILRDSF+D+A    NSK +V+   QLG+L L+GI
Sbjct: 596  AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655

Query: 635  DELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAELTGLAVEEAMGKSLVRDLVYK 694
            DELS VAREMVRLIETAT PIFAVD D CINGWN K+AELTGL+VEEAMGKSLV DL++K
Sbjct: 656  DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715

Query: 695  ESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSRDYTDNIVGVC 754
            ESEE V+KL+SRAL+G+E+KN+EIK+KTFG  P+  + PIFV VNACSSRDYT NIVGVC
Sbjct: 716  ESEETVNKLLSRALRGDEDKNVEIKLKTFG--PEQSKGPIFVIVNACSSRDYTKNIVGVC 775

Query: 755  FVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFASDDNTCCSEWNTAMENLTGWS 814
            FVGQD+T QKV MDKFI+IQ DYKAIVH+P+PLIPPIFASD+NTCCSEWNTAME LTGWS
Sbjct: 776  FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 835

Query: 815  REDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGKNNEKFPFSFYDKKGKYVQAL 874
            R +++GK+LVGEVFG+CCRLKGPD LTKFMIVLH AIGG++ EKFPFSF+DK GKYVQAL
Sbjct: 836  RGEVVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQAL 895

Query: 875  LTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKNRFVRMKELAYICQEVKSPLS 934
            LTAN R  M+G+ +GAFCF+QIAS ELQQ   +QR  EK  + RMKELAYI QE+K+PL+
Sbjct: 896  LTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLN 955

Query: 935  GIRFTNSLLEATDLSEDQKQFLETSVSCEKQI---------------TMEIEKGEFLLGS 994
            GIRFTNSLLE TDL +DQ+QFLETS +CEKQ+               ++ +EKGEF LGS
Sbjct: 956  GIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGS 1015

Query: 995  VINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLNMVRYAPSPEG 1054
            V+NAVVSQ M+ LRER+LQL+RDIP+E+K  + YGDQ RIQQVL DFLL+MVR+AP+  G
Sbjct: 1016 VMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENG 1075

Query: 1055 WVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQDMFHSGRWATQEGLGLSMCRK 1114
            WVE++V P +KQNSD        FR  CPGEGLPPE++QDMF + RW TQEG+GLS+CRK
Sbjct: 1076 WVEIQVRPNIKQNSDGTDTMLFPFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRK 1135

Query: 1115 ILKLMNGEVQYIRESERCYFSITLELPLTERA 1118
            ILKLM GEVQYIRESER +F I LELP  ++A
Sbjct: 1136 ILKLMGGEVQYIRESERSFFHIVLELPQPQQA 1165

[Close]

BLAST of Cp4.1LG08g05280 vs. TrEMBL
Match: A0A0A0L825_CUCSA (Phytochrome OS=Cucumis sativus GN=Csa_3G166340 PE=3 SV=1)

HSP 1 Score: 2048.1 bits (5305), Expect = 0.0e+00
Identity = 1027/1137 (90.33%), Postives = 1074/1137 (94.46%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            MVSSNR T+SHQQQA+SSNTNT    S++RS+RT+SISKA+AQYT+DARLHAVFEQSGES
Sbjct: 1    MVSSNRATHSHQQQAQSSNTNT----SNLRSHRTDSISKAIAQYTVDARLHAVFEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQSI+TSTQSVPEQQITAYLS IQRGGHIQPFGCMIAI+EA+FRVIAYSEN RE
Sbjct: 61   GKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            LLGLTPQSVP+LEK EILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVW+HSKNS K
Sbjct: 121  LLGLTPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLCDT
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN
Sbjct: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHASPVRVIQ AGLMQ LCLVGSTLRAPHGCH+QYMANMGSI+SLAMAVVIN 
Sbjct: 301  RVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            NDDEAIGGR+STRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  NDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
            VEWLLAFHGDSTGLSTDSLADAGYPGAALLG AVCGM VAYITK+DFLFWFRSHT KEIK
Sbjct: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNA 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFK++ 
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDV 600

Query: 601  AINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAEL 660
            AINSK VVHP LGDL+LQGIDELS VAREMVRLIETATAPIFAVD D  INGWN KIAEL
Sbjct: 601  AINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAEL 660

Query: 661  TGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPI 720
            TGLAVEEAMGKSLVRDLVYKESEE VD+LVSRALKGEE+KNIEIKM+TFG + +DQR P 
Sbjct: 661  TGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPE-EDQRTPF 720

Query: 721  FVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFAS 780
            FV VNACSSRDYTDNIVGVCFVGQD+TCQKVFMDKF+SIQ DYKAI+HSP+PLIPPIFAS
Sbjct: 721  FVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFAS 780

Query: 781  DDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGK 840
            DDNTCCSEWNTAME LTGWSREDIIGKMLVGEVFG CCRLKGPD LTKFMIVLH AIGG+
Sbjct: 781  DDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQ 840

Query: 841  NNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKN 900
            +NEK+PFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCF+QIAS ELQQTLRMQRQQEKN
Sbjct: 841  DNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKN 900

Query: 901  RFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI-------- 960
            RF RMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSV+CEKQ+        
Sbjct: 901  RFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMD 960

Query: 961  -------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRI 1020
                   TME+EKGEFLLGSVINAVVSQ M+LLRER+LQL+RDIPEEVKTMAVYGDQVRI
Sbjct: 961  LECIDDGTMELEKGEFLLGSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRI 1020

Query: 1021 QQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQD 1080
            QQVLADFLLNMVRYAPSPEGWVE+RVCP LKQNSD + LA TEFRIVCPGEGLPPEL+QD
Sbjct: 1021 QQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQD 1080

Query: 1081 MFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALGDIG 1123
            MFHSGRW TQEGLGLSMCRKILKLMNGEVQYIRESERCYF ITLELPLTER L D+G
Sbjct: 1081 MFHSGRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERGLNDVG 1132

[Close]

BLAST of Cp4.1LG08g05280 vs. TrEMBL
Match: A0A061EQ17_THECC (Phytochrome OS=Theobroma cacao GN=TCM_021372 PE=3 SV=1)

HSP 1 Score: 1858.6 bits (4813), Expect = 0.0e+00
Identity = 925/1135 (81.50%), Postives = 1019/1135 (89.78%), Query Frame = 1


Query: 1    MVSSNRGTNSH----QQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQ 60
            M S  R  +S     QQQA+SS T+ N       +++ +S+SKA+AQYT+DARLHAVFEQ
Sbjct: 1    MASGGRAVHSQHQQQQQQAQSSGTS-NMRAPRGHNHQADSVSKAIAQYTVDARLHAVFEQ 60

Query: 61   SGESGKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSE 120
            SGE+GKSFDYSQS+RT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DE +FRVIAYSE
Sbjct: 61   SGETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMAVDEPSFRVIAYSE 120

Query: 121  NTRELLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSK 180
            N RE+LG+TPQSVPNLEK E+LTIGTDVR LFT +SA LLEKAFGAREITLLNPVW+HSK
Sbjct: 121  NAREMLGITPQSVPNLEKTEVLTIGTDVRTLFTPSSATLLEKAFGAREITLLNPVWIHSK 180

Query: 181  NSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKL 240
            NS KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGDIKL
Sbjct: 181  NSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKL 240

Query: 241  LCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFL 300
            LCDTVVESV+ELTGYDRVMVYKFHEDEHGEVVAESKRPD +PYIGLHYP++DIPQASRFL
Sbjct: 241  LCDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESKRPDFDPYIGLHYPASDIPQASRFL 300

Query: 301  FKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAV 360
            FKQNRVRMIVDCHA+PVRV+Q  GLMQPLCLVGSTLRAPHGCH+QYMANMGSI+SLAMAV
Sbjct: 301  FKQNRVRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAV 360

Query: 361  VINNNDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ 420
            +IN ND+EAIGGR+S RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ
Sbjct: 361  IINGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ 420

Query: 421  MSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ 480
            +SEK VLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ
Sbjct: 421  LSEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ 480

Query: 481  IKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTG 540
            IK++VEWLL FHGDSTGLSTDSLADAG+PGAA LG AVCGM VAYITKRDFLFWFRSHT 
Sbjct: 481  IKNIVEWLLEFHGDSTGLSTDSLADAGHPGAASLGDAVCGMAVAYITKRDFLFWFRSHTA 540

Query: 541  KEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSF 600
            KEIKWGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSF
Sbjct: 541  KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSF 600

Query: 601  KDNAAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTK 660
            +D  A NSK VVH QLG+L LQG+DELS VAREMVRLIETATAPIFAVDV+  INGWN K
Sbjct: 601  RDTEASNSKAVVHAQLGELELQGVDELSSVAREMVRLIETATAPIFAVDVEGLINGWNAK 660

Query: 661  IAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQ 720
            +AELTGL+VEEAMGKSLV DLVYKE +E VDKL+SRAL+GEE+KN+EIK++TFG   +  
Sbjct: 661  VAELTGLSVEEAMGKSLVHDLVYKEYQETVDKLLSRALQGEEDKNVEIKLRTFG--SEGH 720

Query: 721  RQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPP 780
            ++ I+V VNACSS+DY +NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLIPP
Sbjct: 721  KKAIYVVVNACSSKDYKNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPP 780

Query: 781  IFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGA 840
            IFASD+NTCC EWNTAME LTGW+RE+IIGKMLVGEVFG  CRLKGPD LTKFMIVLH A
Sbjct: 781  IFASDENTCCLEWNTAMEKLTGWTREEIIGKMLVGEVFGSYCRLKGPDALTKFMIVLHNA 840

Query: 841  IGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQ 900
            IGG+  +KFPFSF+D+ GK+VQALLTAN+R+NMEGQ+VGAFCF+QIAS ELQQ L++QRQ
Sbjct: 841  IGGQEADKFPFSFFDRNGKFVQALLTANERVNMEGQVVGAFCFLQIASPELQQALKVQRQ 900

Query: 901  QEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI---- 960
            QE   F RMKEL YICQE+KSPL+GIRFTNSLLEAT+L+EDQKQFLETS +CEKQ+    
Sbjct: 901  QENKCFARMKELTYICQEIKSPLNGIRFTNSLLEATELTEDQKQFLETSAACEKQMLKII 960

Query: 961  -----------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGD 1020
                       +ME+E+ +F LGSVINAVVSQ MLLLRERNLQL+RDIPEE+KT+AVYGD
Sbjct: 961  RDVDVESIEDGSMELERADFYLGSVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGD 1020

Query: 1021 QVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPE 1080
            Q RIQQVLADFLLNMVR+APS EGWVE+ V P LK+ SD L + RTEFR+VCPGEGLPPE
Sbjct: 1021 QARIQQVLADFLLNMVRHAPSAEGWVEIHVRPNLKRISDGLTIVRTEFRMVCPGEGLPPE 1080

Query: 1081 LIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            L+QDMFHS RW TQEGLGLSMCRKILKLMNGEVQYIRESERCYF I LELP+  R
Sbjct: 1081 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPVPRR 1132

[Close]

BLAST of Cp4.1LG08g05280 vs. TrEMBL
Match: B9U4G3_VITVI (Phytochrome OS=Vitis vinifera GN=PHYB PE=3 SV=1)

HSP 1 Score: 1857.0 bits (4809), Expect = 0.0e+00
Identity = 926/1132 (81.80%), Postives = 1016/1132 (89.75%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            M S NRGT SH Q A+SS T      S++R   T+S+SKA+AQYT+DARLHAV+EQSGES
Sbjct: 1    MSSGNRGTQSHHQ-AQSSGT------SNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQS+RT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DEA FRVIA+SEN RE
Sbjct: 61   GKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            +LGLTPQSVP+LEK EIL +GTDVR LFT +SA+LLEKAF AREITLLNPVW+HSKNS K
Sbjct: 121  MLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDI LLC+T
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCET 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVE+VRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLF+QN
Sbjct: 241  VVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHA+PV VIQ  GLMQPLCLVGSTLRAPHGCH+QYMANMGS +SLAMAV+IN 
Sbjct: 301  RVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            +D+EAIGGR+  RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  SDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALYYQGKYYP GVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
             EWLLA H DSTGLSTDSLADAGYPGAA LG AVCGM VAYIT RDFLFWFRSHT KEIK
Sbjct: 481  AEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKD-N 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFKD  
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAT 600

Query: 601  AAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAE 660
               NSK V+H QLG+L LQG+DELS VAREMVRLIETATAPIFAVDVD CINGWN K+AE
Sbjct: 601  DGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 660

Query: 661  LTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQP 720
            LTGL+VEEAMGKSLV DLVYKESEE VDKL+  AL+GEE+KN+EIK++TF  D    ++ 
Sbjct: 661  LTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTF--DSQQHKKA 720

Query: 721  IFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFA 780
            +FV VNACSSRDYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLIPPIFA
Sbjct: 721  VFVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFA 780

Query: 781  SDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGG 840
            SD+NT CSEWNTAME LTGWSR DIIGK+LVGE+FG  CRLKGPD LTKFMIVLH AIGG
Sbjct: 781  SDENTVCSEWNTAMEKLTGWSRGDIIGKILVGEIFGSSCRLKGPDALTKFMIVLHNAIGG 840

Query: 841  KNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEK 900
            ++ +KFPFSF+D+ GKYVQALLTANKR+N+EGQI+GAFCF+QIAS ELQQ L++QRQQEK
Sbjct: 841  QDTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEK 900

Query: 901  NRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI------- 960
              F RMKELAYICQE+K+PLSGIRFTNSLLEATDL+EDQKQFLETS +CEKQ+       
Sbjct: 901  KCFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDV 960

Query: 961  --------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVR 1020
                    ++E+E+ EFLLGSVINAVVSQ M+LLRER+LQL+RDIPEEVKT+AVYGDQVR
Sbjct: 961  DLDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVR 1020

Query: 1021 IQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQ 1080
            IQQVLADFLLNMVRYAPSP+GW+E++VCP LKQ S+ ++L   EFR+VCPGEGLPP LIQ
Sbjct: 1021 IQQVLADFLLNMVRYAPSPDGWIEIQVCPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQ 1080

Query: 1081 DMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            DMFHS RW TQEGLGLSMCRKILKL+NGEVQYIRESERCYF I++ELP+  R
Sbjct: 1081 DMFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPIPHR 1123

[Close]

BLAST of Cp4.1LG08g05280 vs. TrEMBL
Match: B9U4G7_VITRI (Phytochrome OS=Vitis riparia GN=PHYB PE=3 SV=1)

HSP 1 Score: 1856.3 bits (4807), Expect = 0.0e+00
Identity = 927/1132 (81.89%), Postives = 1016/1132 (89.75%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            M S NRGT SH Q A+SS T      S++R   T+S+SKA+AQYT+DARLHAV+EQSGES
Sbjct: 1    MSSGNRGTQSHHQ-AQSSGT------SNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQS+RT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DEA FRVIA+SEN RE
Sbjct: 61   GKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            +LGLTPQSVP+LEK EIL +GTDVR LFT +SA+LLEKAFGAREITLLNPVW+HSKNS K
Sbjct: 121  MLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDI LLC+T
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCET 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVE+VRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLF+QN
Sbjct: 241  VVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHA+PV VIQ  GLMQPLCLVGSTLRAPHGCH+QYMANMGSI+SLAMAV+IN 
Sbjct: 301  RVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            +D+EAIGGR+  RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  SDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALYY GKYYP GVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYLGKYYPTGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
             EWLLA H DSTGLSTDSLADAGYPGAA LG AVCGM VAYIT RDFLFWFRSHT KEIK
Sbjct: 481  AEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKD-N 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFKD  
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAT 600

Query: 601  AAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAE 660
               NSK V+H QLG+L LQG+DELS VAREMVRLIETATAPIFAVDVD CINGWN K+AE
Sbjct: 601  DGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 660

Query: 661  LTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQP 720
            LTGL+VEEAMGKSLV DLVYKESEE VDKL+  AL+GEE+KN+EIK++TF  D    ++ 
Sbjct: 661  LTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTF--DSQQHKKA 720

Query: 721  IFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFA 780
            +FV VNACSSRDYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLIPPIFA
Sbjct: 721  VFVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFA 780

Query: 781  SDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGG 840
            SD+NT CSEWNTAME LTGWSR DIIGKMLVGE+FG  CRLKGPD LTKFMIVLH AIGG
Sbjct: 781  SDENTVCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGG 840

Query: 841  KNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEK 900
            ++ +KFPFSF+D+ GKYVQALLTANKR+N+EGQI+GAFCF+QIAS ELQQ L++QRQQEK
Sbjct: 841  QDTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEK 900

Query: 901  NRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI------- 960
              F RMKELAYICQE+K+PLSGIRFTNSLLEATDL+EDQKQFLETS +CEKQ+       
Sbjct: 901  KCFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDV 960

Query: 961  --------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVR 1020
                    ++E+E+ EFLLGSVINAVVSQ M+LLRER+LQL+RDIPEEVKT+AVYGDQVR
Sbjct: 961  DLDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVR 1020

Query: 1021 IQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQ 1080
            IQQVLADFLLNMVRYAPSP+GW+E++V P LKQ S+ ++L   EFR+VCPGEGLPP LIQ
Sbjct: 1021 IQQVLADFLLNMVRYAPSPDGWIEIQVRPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQ 1080

Query: 1081 DMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            DMFHS RW TQEGLGLSMCRKILKL+NGEVQYIRESERCYF I++ELP+  R
Sbjct: 1081 DMFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPIPRR 1123

[Close]

BLAST of Cp4.1LG08g05280 vs. TrEMBL
Match: F6H723_VITVI (Phytochrome OS=Vitis vinifera GN=VIT_05s0077g00940 PE=3 SV=1)

HSP 1 Score: 1854.7 bits (4803), Expect = 0.0e+00
Identity = 927/1132 (81.89%), Postives = 1015/1132 (89.66%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            M S NRGT SH Q A+SS T      S++R   T+S+SKA+AQYT+DARLHAV+EQSGES
Sbjct: 1    MSSGNRGTQSHHQ-AQSSGT------SNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQS+RT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DEA FRVIA+SEN RE
Sbjct: 61   GKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            +LGLTPQSVP+LEK EIL +GTDVR LFT +SA+LLEKAFGAREITLLNPVW+HSKNS K
Sbjct: 121  MLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDI LLC+T
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCET 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVE+VRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLF+QN
Sbjct: 241  VVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHA+PV VIQ  GLMQPLCLVGSTLRAPHGCH+QYMANMGS +SLAMAV+IN 
Sbjct: 301  RVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            ND+EAIGGR+  RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  NDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALY QGKYYP GVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
             EWLLA H DSTGLSTDSLADAGYPGAA LG AVCGM VAYIT RDFLFWFRSHT KEIK
Sbjct: 481  AEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKD-N 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFKD  
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAT 600

Query: 601  AAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAE 660
               NSK V+H QLG+L LQG+DELS VAREMVRLIETATAPIFAVDVD CINGWN K+AE
Sbjct: 601  DGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 660

Query: 661  LTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQP 720
            LTGL+VEEAMGKSLV DLVYKESEE VDKL+  AL+GEE+KN+EIK++TF  D    ++ 
Sbjct: 661  LTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTF--DSQQHKKA 720

Query: 721  IFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFA 780
            +FV VNACSSRDYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLIPPIFA
Sbjct: 721  VFVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFA 780

Query: 781  SDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGG 840
            SD+NT CSEWNTAME LTGWSR DIIGKMLVGE+FG  CRLKGPD LTKFMIVLH AIGG
Sbjct: 781  SDENTVCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGG 840

Query: 841  KNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEK 900
            ++ +KFPFSF+D+ GKYVQALLTANKR+N+EGQI+GAFCF+QIAS ELQQ L++QRQQEK
Sbjct: 841  QDTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEK 900

Query: 901  NRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI------- 960
              F RMKELAYICQE+K+PLSGIRFTNSLLEATDL+EDQKQFLETS +CEKQ+       
Sbjct: 901  KCFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDV 960

Query: 961  --------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVR 1020
                    ++E+E+ EFLLGSVINAVVSQ M+LLRER+LQL+RDIPEEVKT+AVYGDQVR
Sbjct: 961  DLDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVR 1020

Query: 1021 IQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQ 1080
            IQQVLADFLLNMVRYAPSP+GW+E++V P LKQ S+ ++L   EFR+VCPGEGLPP LIQ
Sbjct: 1021 IQQVLADFLLNMVRYAPSPDGWIEIQVHPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQ 1080

Query: 1081 DMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            DMFHS RW TQEGLGLSMCRKILKL+NGEVQYIRESERCYF I++ELP+  R
Sbjct: 1081 DMFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPVPRR 1123

[Close]

BLAST of Cp4.1LG08g05280 vs. TAIR10
Match: AT2G18790.1 (AT2G18790.1 phytochrome B)

HSP 1 Score: 1706.8 bits (4419), Expect = 0.0e+00
Identity = 863/1140 (75.70%), Postives = 980/1140 (85.96%), Query Frame = 1


Query: 3    SSNRGTNSHQ--QQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 62
            SS+   N+ +  +QA+SS T +       RSN TES+SKA+ QYT+DARLHAVFEQSGES
Sbjct: 23   SSSHTPNNRRGGEQAQSSGTKS----LRPRSN-TESMSKAIQQYTVDARLHAVFEQSGES 82

Query: 63   GKSFDYSQSIRTST--QSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENT 122
            GKSFDYSQS++T+T   SVPEQQITAYLS IQRGG+IQPFGCMIA+DE++FR+I YSEN 
Sbjct: 83   GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENA 142

Query: 123  RELLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNS 182
            RE+LG+ PQSVP LEK EIL +GTDVR+LFTS+S+ILLE+AF AREITLLNPVW+HSKN+
Sbjct: 143  REMLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNT 202

Query: 183  LKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLC 242
             KPFYAILHRIDVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLC
Sbjct: 203  GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLC 262

Query: 243  DTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFK 302
            DTVVESVR+LTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFK
Sbjct: 263  DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 322

Query: 303  QNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVI 362
            QNRVRMIVDC+A+PV V+Q   L Q +CLVGSTLRAPHGCHSQYMANMGSI+SLAMAV+I
Sbjct: 323  QNRVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 382

Query: 363  NNNDDEA---IGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAS 422
            N N+D+      GRSS RLWGLVVCHHTS+RCIPFPLRYACEFLMQAFGLQLNMELQLA 
Sbjct: 383  NGNEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 442

Query: 423  QMSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEA 482
            QMSEK VLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAA  Y GKYYPLGV P+E 
Sbjct: 443  QMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEV 502

Query: 483  QIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHT 542
            QIKDVVEWLLA H DSTGLSTDSL DAGYPGAA LG AVCGM VAYITKRDFLFWFRSHT
Sbjct: 503  QIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 562

Query: 543  GKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDS 602
             KEIKWGGAKHHP DKDDGQRMHPRSSF+AFLEVVKSRS PWETAEMDAIHSLQLILRDS
Sbjct: 563  AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 622

Query: 603  FKDN-AAINSKTV---VHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCIN 662
            FK++ AA+NSK V   V P       QGIDEL  VAREMVRLIETAT PIFAVD   CIN
Sbjct: 623  FKESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCIN 682

Query: 663  GWNTKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGR 722
            GWN KIAELTGL+VEEAMGKSLV DL+YKE+E  V+KL+SRAL+G+EEKN+E+K+KTF  
Sbjct: 683  GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFS- 742

Query: 723  DPDDQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPS 782
             P+ Q + +FV VNACSS+DY +NIVGVCFVGQD+T QK+ MDKFI+IQ DYKAIVHSP+
Sbjct: 743  -PELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPN 802

Query: 783  PLIPPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMI 842
            PLIPPIFA+D+NTCC EWN AME LTGWSR ++IGKM+VGEVFG CC LKGPD LTKFMI
Sbjct: 803  PLIPPIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMI 862

Query: 843  VLHGAIGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTL 902
            VLH AIGG++ +KFPF F+D+ GK+VQALLTANKR+++EG+++GAFCF+QI S ELQQ L
Sbjct: 863  VLHNAIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQAL 922

Query: 903  RMQRQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQ 962
             +QR+Q+   F + KELAYICQ +K+PLSG+RF NSLLEATDL+EDQKQ LETSVSCEKQ
Sbjct: 923  AVQRRQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQ 982

Query: 963  IT-----MEIE----------KGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTM 1022
            I+     M++E          + EF LGSVINA+VSQAM LLR+R LQL+RDIPEE+K++
Sbjct: 983  ISRIVGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSI 1042

Query: 1023 AVYGDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGE 1082
             V+GDQ+RIQQ+LA+FLL+++RYAPS E WVE+ +    KQ +D     RTEFR+ CPGE
Sbjct: 1043 EVFGDQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGE 1102

Query: 1083 GLPPELIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            GLPPEL++DMFHS RW + EGLGLS+CRKILKLMNGEVQYIRESER YF I LELP+  +
Sbjct: 1103 GLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1154

[Close]

BLAST of Cp4.1LG08g05280 vs. TAIR10
Match: AT4G16250.1 (AT4G16250.1 phytochrome D)

HSP 1 Score: 1627.5 bits (4213), Expect = 0.0e+00
Identity = 818/1137 (71.94%), Postives = 954/1137 (83.91%), Query Frame = 1


Query: 5    NRGTNSHQQQAESSNTNTNTNTSHMRSNR--TESISKAVAQYTIDARLHAVFEQSGESGK 64
            +R T++ +Q   S+N    +     +++   TES +KA+ QYT+DARLHAVFEQSGESGK
Sbjct: 22   SRHTSAAEQAQSSANKALRSQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGK 81

Query: 65   SFDYSQSIRTST--QSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 124
            SFDYSQS++T+    SVPEQQITAYLS IQRGG+ QPFGC+IA++E+ F +I YSEN RE
Sbjct: 82   SFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENARE 141

Query: 125  LLGLTPQSVPNLE-KIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSL 184
            +LGL  QSVP++E K E+LTIGTD+R+LF S+S +LLE+AF AREITLLNP+W+HS N+ 
Sbjct: 142  MLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTG 201

Query: 185  KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCD 244
            KPFYAILHR+DVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LP GDIKLLCD
Sbjct: 202  KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCD 261

Query: 245  TVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQ 304
            TVVESVR+LTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQ
Sbjct: 262  TVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQ 321

Query: 305  NRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVIN 364
            NRVRMIVDC+ASPVRV+Q   L Q +CLVGSTLRAPHGCH+QYM NMGSI+SLAMAV+IN
Sbjct: 322  NRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIIN 381

Query: 365  NNDDEA----IGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAS 424
             N+++      GGR+S RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLA 
Sbjct: 382  GNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAL 441

Query: 425  QMSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEA 484
            Q+SEK VLR QTLLCDMLLRDSP GI+TQ PSIMDLVKC+GAA  YQGKYYPLGVTPT++
Sbjct: 442  QVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDS 501

Query: 485  QIKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHT 544
            QI D+VEWL+A H DSTGLSTDSL DAGYP AA LG AVCGM VA ITKRDFLFWFRSHT
Sbjct: 502  QINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHT 561

Query: 545  GKEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDS 604
             KEIKWGGAKHHP DKDDGQRM+PRSSF+ FLEVVKSR  PWETAEMDAIHSLQLILRDS
Sbjct: 562  EKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDS 621

Query: 605  FKDNAAINSKT----VVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCIN 664
            FK++ A++SK      V P   D+  QG+ E+  VAREMVRLIETAT PIFAVD+D CIN
Sbjct: 622  FKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCIN 681

Query: 665  GWNTKIAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGR 724
            GWN KIAELTGL+VE+AMGKSLVR+L+YKE +E VD+L+S ALKG+E KN+E+K+KTFG 
Sbjct: 682  GWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGS 741

Query: 725  DPDDQRQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPS 784
            +   Q + +FV VNACSS+DY +NIVGVCFVGQD+T  K+ MDKFI+IQ DYKAI+HSP+
Sbjct: 742  EL--QGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPN 801

Query: 785  PLIPPIFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMI 844
            PLIPPIFA+D+NTCC EWNTAME LTGW R ++IGK+LV EVFG  CRLKGPD LTKFMI
Sbjct: 802  PLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPDALTKFMI 861

Query: 845  VLHGAIGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTL 904
            VLH AIGG++ +KFPF F+D+KG+++QALLT NKR++++G+I+GAFCF+QI S ELQQ L
Sbjct: 862  VLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQAL 921

Query: 905  RMQRQQEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQ 964
             +QR+QE   F R KELAYI Q +K+PLSG+RFTNSLLE  DL+EDQKQ LETSVSCEKQ
Sbjct: 922  EVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQ 981

Query: 965  I---------------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTM 1024
            I               +  +E+ EF +G+V NAVVSQ ML++RERNLQL+R+IP EVK+M
Sbjct: 982  ISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSM 1041

Query: 1025 AVYGDQVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGE 1084
            AVYGDQ+R+QQVLA+FLL++VRYAP  EG VEL +CP L Q +D     R EFR+ C GE
Sbjct: 1042 AVYGDQIRLQQVLAEFLLSIVRYAPM-EGSVELHLCPTLNQMADGFSAVRLEFRMACAGE 1101

Query: 1085 GLPPELIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPL 1114
            G+PPE +QDMFHS RW + EGLGLS+CRKILKLMNG VQYIRE ER YF I +ELP+
Sbjct: 1102 GVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIELPV 1155

[Close]

BLAST of Cp4.1LG08g05280 vs. TAIR10
Match: AT4G18130.1 (AT4G18130.1 phytochrome E)

HSP 1 Score: 1237.6 bits (3201), Expect = 0.0e+00
Identity = 627/1120 (55.98%), Postives = 824/1120 (73.57%), Query Frame = 1


Query: 17   SSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIRTSTQS 76
            SS+  +N      +SN         AQY++DA L A F QS  +GKSF+YS+S+ +    
Sbjct: 6    SSSAASNMKPQPQKSN--------TAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNH 65

Query: 77   VPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPN----- 136
            VP++ ITAYLS IQRGG +QPFGC+IA++E +FR++  S+N+ + LGL   S+P+     
Sbjct: 66   VPDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSG 125

Query: 137  -LEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLKPFYAILHRID 196
              +K++ L IG D R LFT +S   L KA    EI+LLNPV VHS+ + KPFYAILHRID
Sbjct: 126  EFDKVKGL-IGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRID 185

Query: 197  VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDTVVESVRELTG 256
             GIV+DLEPA++ DPAL++AGAVQSQKLAVRAIS+LQ+LPGGDI  LCDTVVE V+ LTG
Sbjct: 186  AGIVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 245

Query: 257  YDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHA 316
            YDRVMVY+FHED+HGEVV+E +R DLEPY+GLHYP+TDIPQA+RFLFKQNRVRMI DC+A
Sbjct: 246  YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 305

Query: 317  SPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINNNDDEAIGGRS 376
            +PV+V+Q+  L +PLCLV STLRAPHGCH+QYMANMGS++SLA+A+V+         G+ 
Sbjct: 306  TPVKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVK--------GKD 365

Query: 377  STRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLRTQTLLC 436
            S++LWGLVV HH S R +PFPLRYACEFLMQAFGLQL MELQLASQ++EK  +RTQTLLC
Sbjct: 366  SSKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLC 425

Query: 437  DMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHG- 496
            DMLLRD+ + I+TQSP IMDLVKCDGAALYY+GK + +GVTP E+Q+KD+V WL+  HG 
Sbjct: 426  DMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGD 485

Query: 497  DSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPA 556
            DSTGL+TDSL DAGYPGA  LG AVCG+  A  + +D+L WFRS+T   IKWGGAKHHP 
Sbjct: 486  DSTGLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPK 545

Query: 557  DKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKTVVH 616
            DKDD  RMHPRSSF AFLEV KSRSLPWE +E+DAIHSL+LI+R+SF  +  + S     
Sbjct: 546  DKDDAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRPVLS----- 605

Query: 617  PQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAELTGLAVEEAM 676
               G+   +  +EL+    EMVR+IETATAPIF VD   CINGWN K AE+TGL   EAM
Sbjct: 606  ---GNGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAM 665

Query: 677  GKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGR-DPDDQRQPIFVAVNACS 736
            GKSL  ++V +ES   ++ L+ +AL+GEEEK++ +K++ FG+ +  D    + V VN+C+
Sbjct: 666  GKSLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCT 725

Query: 737  SRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFASDDNTCCSE 796
            SRDYT+NI+GVCFVGQD+T +K   D+FI +Q DYK IV S +PLIPPIFASD+N CCSE
Sbjct: 726  SRDYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSE 785

Query: 797  WNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGKN-NEKFPF 856
            WN AME LTGWS+ ++IGKML GEVFG  C++K  D LTKF+I L+  I G N  E    
Sbjct: 786  WNAAMEKLTGWSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLV 845

Query: 857  SFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKNRFVRMKE 916
             F++K+GKY++A LTANK  N+EG+++  F F+QI + E   +    ++  ++    + E
Sbjct: 846  EFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKESGLSCPELKESAQS----LNE 905

Query: 917  LAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQIT-------------- 976
            L Y+ QE+K+PL+GIRF + LLE++++S  Q+QFLETS +CEKQIT              
Sbjct: 906  LTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEG 965

Query: 977  -MEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADF 1036
             +++E  EF L ++++ ++SQ M++LRERN QL  ++ EE+KT+ + GD+V++Q +LAD 
Sbjct: 966  KLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADL 1025

Query: 1037 LLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQDMFHS-GR 1096
            L N+V +AP P  WV + + P  + + D  R    +FR++ PG+GLP E++ DMF +   
Sbjct: 1026 LRNIVNHAPFPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDG 1085

Query: 1097 WATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLEL 1112
            W T +GLGL + RK+L+ MNG V Y+RE ERC+F + L++
Sbjct: 1086 WVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQVDLQV 1094

[Close]

BLAST of Cp4.1LG08g05280 vs. TAIR10
Match: AT1G09570.1 (AT1G09570.1 phytochrome A)

HSP 1 Score: 1139.4 bits (2946), Expect = 0.0e+00
Identity = 580/1112 (52.16%), Postives = 776/1112 (69.78%), Query Frame = 1


Query: 31   SNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIRTSTQSVPEQQ------ITA 90
            S R+   ++ +AQ T+DA+LHA FE   ESG SFDYS S+R +   V  Q        T 
Sbjct: 13   SRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVENQPPRSDKVTTT 72

Query: 91   YLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNLEKIEILTIGTDV 150
            YL  IQ+G  IQPFGC++A+DE  F+VIAYSEN  ELL +   +VP++ +  +L IGTD+
Sbjct: 73   YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHPVLGIGTDI 132

Query: 151  RNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLKPFYAILHRIDVGIVIDLEPARTED 210
            R+LFT+ SA  L+KA G  +++LLNP+ VH + S KPFYAI+HR+   I+ID EP +  +
Sbjct: 133  RSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIIDFEPVKPYE 192

Query: 211  PALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEH 270
              ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+V+ V ELTGYDRVM YKFHED+H
Sbjct: 193  VPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDH 252

Query: 271  GEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQAAGLMQP 330
            GEVV+E  +P LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC+A   RV+Q   L   
Sbjct: 253  GEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQDEKLSFD 312

Query: 331  LCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINNNDDEAIGGRSST------RLWGLV 390
            L L GSTLRAPH CH QYMANM SI+SL MAVV+N  D E     ++T      RLWGLV
Sbjct: 313  LTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQKRKRLWGLV 372

Query: 391  VCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLRTQTLLCDMLLRDSP 450
            VCH+T+ R +PFPLRYACEFL Q F + +N E++L +QM EK++LRTQTLLCDML+RD+P
Sbjct: 373  VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLCDMLMRDAP 432

Query: 451  TGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGDSTGLSTDS 510
             GI++QSP+IMDLVKCDGAAL Y+ K + LG TP+E  ++++  WL  +H DSTGLSTDS
Sbjct: 433  LGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDSTGLSTDS 492

Query: 511  LADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPADKDDGQRMH 570
            L DAG+P A  LG +VCGM    I+ +D +FWFRSHT  E++WGGAKH P D+DD +RMH
Sbjct: 493  LHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDDARRMH 552

Query: 571  PRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKT-VVHPQLGDLNL 630
            PRSSFKAFLEVVK+RSLPW+  EMDAIHSLQLILR++FKD+   +  T V++ +L DL +
Sbjct: 553  PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYSKLNDLKI 612

Query: 631  QGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAELTGLAVEEAMGKSLVRDL 690
             GI EL  V  EMVRLIETAT PI AVD D  +NGWNTKIAELTGL+V+EA+GK  +  L
Sbjct: 613  DGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKHFL-TL 672

Query: 691  VYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSRDYTDNIV 750
            V   S EIV +++  AL+G EE+N++ ++KT     D    PI + VNAC+SRD  +N+V
Sbjct: 673  VEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRAD--AGPISLVVNACASRDLHENVV 732

Query: 751  GVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFASDDNTCCSEWNTAMENLT 810
            GVCFV  DLT QK  MDKF  I+ DYKAI+ +P+PLIPPIF +D+   C+EWN AM  LT
Sbjct: 733  GVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPAMSKLT 792

Query: 811  GWSREDIIGKMLVGEVFG---DCCRLKGPDELTKFMIVLHGAIGGKNNEKFPFSFYDKKG 870
            G  RE++I KML+GEVFG    CCRLK  +      IVL+ A+  ++ EK  F+F+ + G
Sbjct: 793  GLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAFFTRGG 852

Query: 871  KYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKNRFVRMKELAYICQE 930
            KYV+ LL  +K+++ EG + G FCF+Q+AS ELQQ L +QR  E+    R+K LAYI ++
Sbjct: 853  KYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALAYIKRQ 912

Query: 931  VKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQIT---------------MEIEKG 990
            +++PLSGI FT  ++E T+L  +Q++ L+TS  C+KQ++               +++E  
Sbjct: 913  IRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCLDLEMK 972

Query: 991  EFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLNMVRY 1050
            EF L  V+ A  SQ M+    +++++  +  EEV +  +YGD +R+QQVLADF+L  V +
Sbjct: 973  EFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFMLMAVNF 1032

Query: 1051 APSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQDMFHSGRWATQEGLG 1110
             PS  G + +       Q    + LA  E R+   G G+P  L+  MF +    ++EGL 
Sbjct: 1033 TPS-GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDVSEEGLS 1092

Query: 1111 LSMCRKILKLMNGEVQYIRESERCYFSITLEL 1112
            L + RK++KLMNG+VQY+R++ +  F IT EL
Sbjct: 1093 LMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117

[Close]

BLAST of Cp4.1LG08g05280 vs. TAIR10
Match: AT5G35840.1 (AT5G35840.1 phytochrome C)

HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 572/1120 (51.07%), Postives = 785/1120 (70.09%), Query Frame = 1


Query: 23   NTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGESGKSFDYSQSIR----TSTQSVP 82
            ++NTS   S R+   S+  +Q  +DA+LH  FE   ES + FDYS SI     +S+  +P
Sbjct: 2    SSNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIP 61

Query: 83   EQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRELLGLTPQSVPNLEKIEIL 142
               ++ YL  IQRG  IQPFGC+I +DE N +VIA+SENT+E+LGL P +VP++E+ E L
Sbjct: 62   SSAVSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREAL 121

Query: 143  TIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLKPFYAILHRIDVGIVIDLE 202
            TIGTDV++LF S     LEKA    EI++LNP+ +H ++S KPFYAILHRI+ G+VIDLE
Sbjct: 122  TIGTDVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLE 181

Query: 203  PARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDTVVESVRELTGYDRVMVYK 262
            P   ++  ++ AGA++S KLA ++IS+LQALP G++ LLCD +V+ V ELTGYDRVMVYK
Sbjct: 182  PVSPDEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYK 241

Query: 263  FHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQA 322
            FHED HGEV+AE  R D+EPY+GLHY +TDIPQASRFLF +N+VRMI DC A PV+V+Q 
Sbjct: 242  FHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQD 301

Query: 323  AGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINNNDDEAIGG--RSSTRLWG 382
              L QP+ L GSTLRAPHGCH+QYM+NMGS++SL M+V IN +D + +    ++   LWG
Sbjct: 302  KSLSQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWG 361

Query: 383  LVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLRTQTLLCDMLLRD 442
            LVVCHH S R +PFPLRYACEFL Q FG+Q+N E + A  + EK +L+TQ++LCDML R+
Sbjct: 362  LVVCHHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRN 421

Query: 443  SPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDVVEWLLAFHGDSTGLST 502
            +P GI+TQSP+IMDLVKCDGAALYY+   + LGVTPTE QI+D+++W+L  HG +TG +T
Sbjct: 422  APIGIVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTT 481

Query: 503  DSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIKWGGAKHHPADKDDGQR 562
            +SL ++GYP A++LG ++CGM   YI+++DFLFWFRS T K+IKWGGA+H P D+ DG+R
Sbjct: 482  ESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKR 541

Query: 563  MHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNAAINSKTVVHPQLGDLN 622
            MHPRSSFKAF+E+V+ +S+PW+  EMDAI+SLQLI++ S ++    +SKTVV   L D  
Sbjct: 542  MHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEE---HSKTVVDVPLVDNR 601

Query: 623  LQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAELTGLAVEEAMGKSLVRD 682
            +Q +DEL ++  EMVRLI+TA  PIFAVD    INGWN+K AE+TGLAVE+A+GK  V D
Sbjct: 602  VQKVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSD 661

Query: 683  LVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPIFVAVNACSSRDYTDNI 742
            LV  +S E V  +++ AL+G EE+  EI+++ FG  P  +  P+ + VN C SRD T+N+
Sbjct: 662  LVEDDSVETVKNMLALALEGSEERGAEIRIRAFG--PKRKSSPVELVVNTCCSRDMTNNV 721

Query: 743  VGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFASDDNTCCSEWNTAMENL 802
            +GVCF+GQD+T QK   + +  ++ DY  I+ SPS LIPPIF +++N  CSEWN AM+ L
Sbjct: 722  LGVCFIGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKL 781

Query: 803  TGWSREDIIGKMLVGEVFG----DCCRLKGPDELTKFMIVLHGAIGG-KNNEKFPFSFYD 862
            +G  RE+++ K+L+GEVF      CC LK  D LTK  I  +  I G KN EK  F FY 
Sbjct: 782  SGIKREEVVNKILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYH 841

Query: 863  KKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKNRFVRMKELAYI 922
            + G +++ALL+ANKR ++EG++ G  CF+Q+ S ELQ  L++Q+  E      + +LAY+
Sbjct: 842  RDGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYL 901

Query: 923  CQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQIT---------------MEI 982
              EVK P   I F   LL ++ LSEDQK+ L TSV C +Q+                +E+
Sbjct: 902  RHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVEL 961

Query: 983  EKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRIQQVLADFLLNM 1042
            +  EF L   + AVV Q M L  ER +Q+  D P+EV +M +YGD +R+QQ+L++ LL+ 
Sbjct: 962  DCSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSS 1021

Query: 1043 VRYAPSPEG-WVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQDMFHSGRWAT- 1102
            +R+ P+  G  V  +V   ++    R++    EFRI+ P  GLP +L+++MF   R  T 
Sbjct: 1022 IRFTPALRGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTS 1081

Query: 1103 QEGLGLSMCRKILKLM-NGEVQYIRESERCYFSITLELPL 1114
            +EGLGL + +K++KLM  G ++Y+RESE   F I  E PL
Sbjct: 1082 REGLGLHITQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110

[Close]

BLAST of Cp4.1LG08g05280 vs. NCBI nr
Match: gi|659076964|ref|XP_008438960.1| (PREDICTED: phytochrome B [Cucumis melo])

HSP 1 Score: 2051.9 bits (5315), Expect = 0.0e+00
Identity = 1029/1137 (90.50%), Postives = 1074/1137 (94.46%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            MVSSNR T+SHQQQA+SSNTNT    S++RS+RT+SISKA+AQYT+DARLHAVFEQSGES
Sbjct: 1    MVSSNRATHSHQQQAQSSNTNT----SNLRSHRTDSISKAIAQYTVDARLHAVFEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQSIRTSTQSVPEQQITAYLS IQRGGHIQPFGCMIAI+EA+FRVIAYSEN RE
Sbjct: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            LLGLTPQSVP+LEK EILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVW+HSKNS K
Sbjct: 121  LLGLTPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLCDT
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN
Sbjct: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHASPVRVIQ AGLMQ LCLVGSTLRAPHGCH+QYMANMGSI+SLAMAVVIN 
Sbjct: 301  RVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            NDDEAIGGR+STRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK
Sbjct: 361  NDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
            VEWLLAFHGDSTGLSTDSLADAGYPGAALLG AVCGM VAYITK+DFLFWFRSHT KEIK
Sbjct: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNA 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFKD+ 
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDDV 600

Query: 601  AINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAEL 660
            AINSK VVHP LGDL+LQGIDELS VAREMVRLIETATAPIFAVD D  INGWN KIAEL
Sbjct: 601  AINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAEL 660

Query: 661  TGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPI 720
            TGLAVEEAMGKSLVRDLVYKESEE VDKLVSRALKGEE+KN+E+K++TFG + +DQR P 
Sbjct: 661  TGLAVEEAMGKSLVRDLVYKESEETVDKLVSRALKGEEDKNVELKLRTFGPE-EDQRTPF 720

Query: 721  FVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFAS 780
            FV VNACSSRDYTDNIVGVCFVGQD+TCQKVFMDKF+SIQ DYKAI+HSP+PLIPPIFAS
Sbjct: 721  FVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFAS 780

Query: 781  DDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGK 840
            DDNTCCSEWNTAME LTGWSREDIIGKMLVGEVFG CCRLKGPD LTKFMIVLH AIGG+
Sbjct: 781  DDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQ 840

Query: 841  NNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKN 900
            +NEK+PFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCF+QIAS ELQQTLRMQRQQEKN
Sbjct: 841  DNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKN 900

Query: 901  RFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI-------- 960
            RF RMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSV+CEKQ+        
Sbjct: 901  RFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMD 960

Query: 961  -------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRI 1020
                   TME+EKGEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEVKTMAVYGDQVRI
Sbjct: 961  LECIDDGTMELEKGEFLLGSVINAVVSQVMILLRERNLQLIRDIPEEVKTMAVYGDQVRI 1020

Query: 1021 QQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQD 1080
            QQVLADFLLNMVRYAPSPEGWVE+RVCP LKQNS+ + LA TEFRIVCPGEGLPPEL+QD
Sbjct: 1021 QQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSEGITLAHTEFRIVCPGEGLPPELVQD 1080

Query: 1081 MFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALGDIG 1123
            MFHSGRW TQEGLGLSMCRKILKLMNGEVQYIRESERCYF ITLELPLTER L DIG
Sbjct: 1081 MFHSGRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERGLNDIG 1132

[Close]

BLAST of Cp4.1LG08g05280 vs. NCBI nr
Match: gi|778679085|ref|XP_004134246.2| (PREDICTED: phytochrome B [Cucumis sativus])

HSP 1 Score: 2048.1 bits (5305), Expect = 0.0e+00
Identity = 1027/1137 (90.33%), Postives = 1074/1137 (94.46%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            MVSSNR T+SHQQQA+SSNTNT    S++RS+RT+SISKA+AQYT+DARLHAVFEQSGES
Sbjct: 1    MVSSNRATHSHQQQAQSSNTNT----SNLRSHRTDSISKAIAQYTVDARLHAVFEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQSI+TSTQSVPEQQITAYLS IQRGGHIQPFGCMIAI+EA+FRVIAYSEN RE
Sbjct: 61   GKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            LLGLTPQSVP+LEK EILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVW+HSKNS K
Sbjct: 121  LLGLTPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQALPGGDIKLLCDT
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN
Sbjct: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHASPVRVIQ AGLMQ LCLVGSTLRAPHGCH+QYMANMGSI+SLAMAVVIN 
Sbjct: 301  RVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            NDDEAIGGR+STRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  NDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSP GI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
            VEWLLAFHGDSTGLSTDSLADAGYPGAALLG AVCGM VAYITK+DFLFWFRSHT KEIK
Sbjct: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNA 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFK++ 
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDV 600

Query: 601  AINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAEL 660
            AINSK VVHP LGDL+LQGIDELS VAREMVRLIETATAPIFAVD D  INGWN KIAEL
Sbjct: 601  AINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAEL 660

Query: 661  TGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPI 720
            TGLAVEEAMGKSLVRDLVYKESEE VD+LVSRALKGEE+KNIEIKM+TFG + +DQR P 
Sbjct: 661  TGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPE-EDQRTPF 720

Query: 721  FVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFAS 780
            FV VNACSSRDYTDNIVGVCFVGQD+TCQKVFMDKF+SIQ DYKAI+HSP+PLIPPIFAS
Sbjct: 721  FVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFAS 780

Query: 781  DDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGK 840
            DDNTCCSEWNTAME LTGWSREDIIGKMLVGEVFG CCRLKGPD LTKFMIVLH AIGG+
Sbjct: 781  DDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQ 840

Query: 841  NNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKN 900
            +NEK+PFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCF+QIAS ELQQTLRMQRQQEKN
Sbjct: 841  DNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKN 900

Query: 901  RFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI-------- 960
            RF RMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSV+CEKQ+        
Sbjct: 901  RFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMD 960

Query: 961  -------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRI 1020
                   TME+EKGEFLLGSVINAVVSQ M+LLRER+LQL+RDIPEEVKTMAVYGDQVRI
Sbjct: 961  LECIDDGTMELEKGEFLLGSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRI 1020

Query: 1021 QQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQD 1080
            QQVLADFLLNMVRYAPSPEGWVE+RVCP LKQNSD + LA TEFRIVCPGEGLPPEL+QD
Sbjct: 1021 QQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQD 1080

Query: 1081 MFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTERALGDIG 1123
            MFHSGRW TQEGLGLSMCRKILKLMNGEVQYIRESERCYF ITLELPLTER L D+G
Sbjct: 1081 MFHSGRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERGLNDVG 1132

[Close]

BLAST of Cp4.1LG08g05280 vs. NCBI nr
Match: gi|1009132072|ref|XP_015883188.1| (PREDICTED: phytochrome B [Ziziphus jujuba])

HSP 1 Score: 1886.7 bits (4886), Expect = 0.0e+00
Identity = 936/1128 (82.98%), Postives = 1021/1128 (90.51%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            M SS++     QQQA+SS T      S++R++ TES+SKA+AQYT+DARLHAVFEQSGES
Sbjct: 1    MASSSKAAAHSQQQAQSSGT------SNVRAHNTESVSKAIAQYTVDARLHAVFEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQSIRT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DEA FRVI YSEN R+
Sbjct: 61   GKSFDYSQSIRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIGYSENARD 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            +LGLTPQSVP+LEK E L +GTDVR LFT +SA+LLEKAFGAREITLLNPVW+HSKNS +
Sbjct: 121  MLGLTPQSVPSLEKPEFLKVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGR 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGDIKLLCDT
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVESVRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLFKQN
Sbjct: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHA PVRV+Q  GLMQPLCLVGSTLRAPHGCH+QYMANMGSI+SLAMA+VIN 
Sbjct: 301  RVRMIVDCHAMPVRVVQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAIVING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            NDDE++GGR+  RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  NDDESVGGRNPMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE QIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
            VEWLLAFHGDSTGLSTDSLADAGYPGAALLG AVCGM VAYITKRDFLFWFRSHTGKEIK
Sbjct: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKRDFLFWFRSHTGKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKDNA 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSF+D  
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAE 600

Query: 601  AINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAEL 660
            A N+K V++ Q+ DL LQG+DELS VAREMVRLIETATAPIFAVDVD  INGWN K+AEL
Sbjct: 601  ASNTKAVINAQIEDLELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAEL 660

Query: 661  TGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQPI 720
            TGL+VE+AMGKSLV DLVYKESEE VDKL+ RALKGEE+KN+EIKMK FG   +    PI
Sbjct: 661  TGLSVEKAMGKSLVHDLVYKESEETVDKLLFRALKGEEDKNVEIKMKRFG--AEHHNDPI 720

Query: 721  FVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFAS 780
            FV VNACSS+DYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVH+PSPLIPPIFAS
Sbjct: 721  FVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHNPSPLIPPIFAS 780

Query: 781  DDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGGK 840
            DDNTCCSEWNTAME LTGW+R DIIGKMLVGEVFG CCRLKGPD LTKFMIVLH AIGG+
Sbjct: 781  DDNTCCSEWNTAMEKLTGWTRADIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHNAIGGQ 840

Query: 841  NNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEKN 900
            + +KFPFSF+D+ GKYVQALLTANKR+NM+GQI+GAFCF+QIAS ELQQ L++QRQQEK 
Sbjct: 841  DEDKFPFSFFDRNGKYVQALLTANKRINMDGQIIGAFCFLQIASPELQQALKVQRQQEKK 900

Query: 901  RFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI-------- 960
             F RMKELAYICQE+K+PLSGIRFTNSLLEATDL++DQKQFLETS +CEKQ+        
Sbjct: 901  CFSRMKELAYICQEIKNPLSGIRFTNSLLEATDLTDDQKQFLETSSACEKQMLKIIRDVD 960

Query: 961  -------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVRI 1020
                   ++E++K EFLLGSVINAVVSQ M+LLRERN+QL+RDIPEE+KTMAVYGDQVRI
Sbjct: 961  LESIENGSLELDKAEFLLGSVINAVVSQVMILLRERNIQLIRDIPEEIKTMAVYGDQVRI 1020

Query: 1021 QQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQD 1080
            QQVLADFLLNMVRYAPSPEGWVE+ V P LK+  D L L  TEFR+VCPGEGLPP+L+QD
Sbjct: 1021 QQVLADFLLNMVRYAPSPEGWVEIHVRPSLKRVPDGLTLLHTEFRMVCPGEGLPPDLVQD 1080

Query: 1081 MFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPL 1114
            MFHS RW TQEGLGLSMCRKILKLM GE+QYIRESERCYF I L+LP+
Sbjct: 1081 MFHSSRWMTQEGLGLSMCRKILKLMGGEIQYIRESERCYFLIILQLPI 1120

[Close]

BLAST of Cp4.1LG08g05280 vs. NCBI nr
Match: gi|590661925|ref|XP_007035807.1| (Phytochrome B isoform 1 [Theobroma cacao])

HSP 1 Score: 1858.6 bits (4813), Expect = 0.0e+00
Identity = 925/1135 (81.50%), Postives = 1019/1135 (89.78%), Query Frame = 1


Query: 1    MVSSNRGTNSH----QQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQ 60
            M S  R  +S     QQQA+SS T+ N       +++ +S+SKA+AQYT+DARLHAVFEQ
Sbjct: 1    MASGGRAVHSQHQQQQQQAQSSGTS-NMRAPRGHNHQADSVSKAIAQYTVDARLHAVFEQ 60

Query: 61   SGESGKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSE 120
            SGE+GKSFDYSQS+RT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DE +FRVIAYSE
Sbjct: 61   SGETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMAVDEPSFRVIAYSE 120

Query: 121  NTRELLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSK 180
            N RE+LG+TPQSVPNLEK E+LTIGTDVR LFT +SA LLEKAFGAREITLLNPVW+HSK
Sbjct: 121  NAREMLGITPQSVPNLEKTEVLTIGTDVRTLFTPSSATLLEKAFGAREITLLNPVWIHSK 180

Query: 181  NSLKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKL 240
            NS KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGDIKL
Sbjct: 181  NSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKL 240

Query: 241  LCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFL 300
            LCDTVVESV+ELTGYDRVMVYKFHEDEHGEVVAESKRPD +PYIGLHYP++DIPQASRFL
Sbjct: 241  LCDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESKRPDFDPYIGLHYPASDIPQASRFL 300

Query: 301  FKQNRVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAV 360
            FKQNRVRMIVDCHA+PVRV+Q  GLMQPLCLVGSTLRAPHGCH+QYMANMGSI+SLAMAV
Sbjct: 301  FKQNRVRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAV 360

Query: 361  VINNNDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ 420
            +IN ND+EAIGGR+S RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ
Sbjct: 361  IINGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ 420

Query: 421  MSEKHVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ 480
            +SEK VLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ
Sbjct: 421  LSEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQ 480

Query: 481  IKDVVEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTG 540
            IK++VEWLL FHGDSTGLSTDSLADAG+PGAA LG AVCGM VAYITKRDFLFWFRSHT 
Sbjct: 481  IKNIVEWLLEFHGDSTGLSTDSLADAGHPGAASLGDAVCGMAVAYITKRDFLFWFRSHTA 540

Query: 541  KEIKWGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSF 600
            KEIKWGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSF
Sbjct: 541  KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSF 600

Query: 601  KDNAAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTK 660
            +D  A NSK VVH QLG+L LQG+DELS VAREMVRLIETATAPIFAVDV+  INGWN K
Sbjct: 601  RDTEASNSKAVVHAQLGELELQGVDELSSVAREMVRLIETATAPIFAVDVEGLINGWNAK 660

Query: 661  IAELTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQ 720
            +AELTGL+VEEAMGKSLV DLVYKE +E VDKL+SRAL+GEE+KN+EIK++TFG   +  
Sbjct: 661  VAELTGLSVEEAMGKSLVHDLVYKEYQETVDKLLSRALQGEEDKNVEIKLRTFG--SEGH 720

Query: 721  RQPIFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPP 780
            ++ I+V VNACSS+DY +NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLIPP
Sbjct: 721  KKAIYVVVNACSSKDYKNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPP 780

Query: 781  IFASDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGA 840
            IFASD+NTCC EWNTAME LTGW+RE+IIGKMLVGEVFG  CRLKGPD LTKFMIVLH A
Sbjct: 781  IFASDENTCCLEWNTAMEKLTGWTREEIIGKMLVGEVFGSYCRLKGPDALTKFMIVLHNA 840

Query: 841  IGGKNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQ 900
            IGG+  +KFPFSF+D+ GK+VQALLTAN+R+NMEGQ+VGAFCF+QIAS ELQQ L++QRQ
Sbjct: 841  IGGQEADKFPFSFFDRNGKFVQALLTANERVNMEGQVVGAFCFLQIASPELQQALKVQRQ 900

Query: 901  QEKNRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI---- 960
            QE   F RMKEL YICQE+KSPL+GIRFTNSLLEAT+L+EDQKQFLETS +CEKQ+    
Sbjct: 901  QENKCFARMKELTYICQEIKSPLNGIRFTNSLLEATELTEDQKQFLETSAACEKQMLKII 960

Query: 961  -----------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGD 1020
                       +ME+E+ +F LGSVINAVVSQ MLLLRERNLQL+RDIPEE+KT+AVYGD
Sbjct: 961  RDVDVESIEDGSMELERADFYLGSVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGD 1020

Query: 1021 QVRIQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPE 1080
            Q RIQQVLADFLLNMVR+APS EGWVE+ V P LK+ SD L + RTEFR+VCPGEGLPPE
Sbjct: 1021 QARIQQVLADFLLNMVRHAPSAEGWVEIHVRPNLKRISDGLTIVRTEFRMVCPGEGLPPE 1080

Query: 1081 LIQDMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            L+QDMFHS RW TQEGLGLSMCRKILKLMNGEVQYIRESERCYF I LELP+  R
Sbjct: 1081 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPVPRR 1132

[Close]

BLAST of Cp4.1LG08g05280 vs. NCBI nr
Match: gi|189409279|gb|ACC60966.1| (phytochrome B [Vitis vinifera])

HSP 1 Score: 1857.0 bits (4809), Expect = 0.0e+00
Identity = 926/1132 (81.80%), Postives = 1016/1132 (89.75%), Query Frame = 1


Query: 1    MVSSNRGTNSHQQQAESSNTNTNTNTSHMRSNRTESISKAVAQYTIDARLHAVFEQSGES 60
            M S NRGT SH Q A+SS T      S++R   T+S+SKA+AQYT+DARLHAV+EQSGES
Sbjct: 1    MSSGNRGTQSHHQ-AQSSGT------SNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGES 60

Query: 61   GKSFDYSQSIRTSTQSVPEQQITAYLSMIQRGGHIQPFGCMIAIDEANFRVIAYSENTRE 120
            GKSFDYSQS+RT+TQSVPEQQITAYLS IQRGGHIQPFGCM+A+DEA FRVIA+SEN RE
Sbjct: 61   GKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENARE 120

Query: 121  LLGLTPQSVPNLEKIEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWVHSKNSLK 180
            +LGLTPQSVP+LEK EIL +GTDVR LFT +SA+LLEKAF AREITLLNPVW+HSKNS K
Sbjct: 121  MLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSGK 180

Query: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISKLQALPGGDIKLLCDT 240
            PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQ+LPGGDI LLC+T
Sbjct: 181  PFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCET 240

Query: 241  VVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQN 300
            VVE+VRELTGYDRVMVYKFHEDEHGEVVAESKR DLEPYIGLHYP+TDIPQASRFLF+QN
Sbjct: 241  VVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQN 300

Query: 301  RVRMIVDCHASPVRVIQAAGLMQPLCLVGSTLRAPHGCHSQYMANMGSISSLAMAVVINN 360
            RVRMIVDCHA+PV VIQ  GLMQPLCLVGSTLRAPHGCH+QYMANMGS +SLAMAV+IN 
Sbjct: 301  RVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIING 360

Query: 361  NDDEAIGGRSSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEK 420
            +D+EAIGGR+  RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQ+SEK
Sbjct: 361  SDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEK 420

Query: 421  HVLRTQTLLCDMLLRDSPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDV 480
            HVLRTQTLLCDMLLRDSPTGI+TQSPSIMDLVKCDGAALYYQGKYYP GVTPTEAQIKD+
Sbjct: 421  HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKDI 480

Query: 481  VEWLLAFHGDSTGLSTDSLADAGYPGAALLGGAVCGMDVAYITKRDFLFWFRSHTGKEIK 540
             EWLLA H DSTGLSTDSLADAGYPGAA LG AVCGM VAYIT RDFLFWFRSHT KEIK
Sbjct: 481  AEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIK 540

Query: 541  WGGAKHHPADKDDGQRMHPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILRDSFKD-N 600
            WGGAKHHP DKDDGQRMHPRSSFKAFLEVVKSRSLPWE AEMDAIHSLQLILRDSFKD  
Sbjct: 541  WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAT 600

Query: 601  AAINSKTVVHPQLGDLNLQGIDELSLVAREMVRLIETATAPIFAVDVDSCINGWNTKIAE 660
               NSK V+H QLG+L LQG+DELS VAREMVRLIETATAPIFAVDVD CINGWN K+AE
Sbjct: 601  DGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 660

Query: 661  LTGLAVEEAMGKSLVRDLVYKESEEIVDKLVSRALKGEEEKNIEIKMKTFGRDPDDQRQP 720
            LTGL+VEEAMGKSLV DLVYKESEE VDKL+  AL+GEE+KN+EIK++TF  D    ++ 
Sbjct: 661  LTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTF--DSQQHKKA 720

Query: 721  IFVAVNACSSRDYTDNIVGVCFVGQDLTCQKVFMDKFISIQCDYKAIVHSPSPLIPPIFA 780
            +FV VNACSSRDYT+NIVGVCFVGQD+T QKV MDKFI IQ DYKAIVHSP+PLIPPIFA
Sbjct: 721  VFVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFA 780

Query: 781  SDDNTCCSEWNTAMENLTGWSREDIIGKMLVGEVFGDCCRLKGPDELTKFMIVLHGAIGG 840
            SD+NT CSEWNTAME LTGWSR DIIGK+LVGE+FG  CRLKGPD LTKFMIVLH AIGG
Sbjct: 781  SDENTVCSEWNTAMEKLTGWSRGDIIGKILVGEIFGSSCRLKGPDALTKFMIVLHNAIGG 840

Query: 841  KNNEKFPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFVQIASLELQQTLRMQRQQEK 900
            ++ +KFPFSF+D+ GKYVQALLTANKR+N+EGQI+GAFCF+QIAS ELQQ L++QRQQEK
Sbjct: 841  QDTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEK 900

Query: 901  NRFVRMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVSCEKQI------- 960
              F RMKELAYICQE+K+PLSGIRFTNSLLEATDL+EDQKQFLETS +CEKQ+       
Sbjct: 901  KCFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDV 960

Query: 961  --------TMEIEKGEFLLGSVINAVVSQAMLLLRERNLQLVRDIPEEVKTMAVYGDQVR 1020
                    ++E+E+ EFLLGSVINAVVSQ M+LLRER+LQL+RDIPEEVKT+AVYGDQVR
Sbjct: 961  DLDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVR 1020

Query: 1021 IQQVLADFLLNMVRYAPSPEGWVELRVCPFLKQNSDRLRLARTEFRIVCPGEGLPPELIQ 1080
            IQQVLADFLLNMVRYAPSP+GW+E++VCP LKQ S+ ++L   EFR+VCPGEGLPP LIQ
Sbjct: 1021 IQQVLADFLLNMVRYAPSPDGWIEIQVCPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQ 1080

Query: 1081 DMFHSGRWATQEGLGLSMCRKILKLMNGEVQYIRESERCYFSITLELPLTER 1117
            DMFHS RW TQEGLGLSMCRKILKL+NGEVQYIRESERCYF I++ELP+  R
Sbjct: 1081 DMFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPIPHR 1123

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g05280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHYB_TOBAC	0.0e+00	79.27	Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2	[more]
PHYB_SOLTU	0.0e+00	77.86	Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2	[more]
PHYB1_SOLLC	0.0e+00	77.79	Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1	[more]
PHYB_ARATH	0.0e+00	75.70	Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1	[more]
PHYB_ORYSI	0.0e+00	74.82	Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2	[more]

BLAST of Cp4.1LG08g05280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L825_CUCSA	0.0e+00	90.33	Phytochrome OS=Cucumis sativus GN=Csa_3G166340 PE=3 SV=1	[more]
A0A061EQ17_THECC	0.0e+00	81.50	Phytochrome OS=Theobroma cacao GN=TCM_021372 PE=3 SV=1	[more]
B9U4G3_VITVI	0.0e+00	81.80	Phytochrome OS=Vitis vinifera GN=PHYB PE=3 SV=1	[more]
B9U4G7_VITRI	0.0e+00	81.89	Phytochrome OS=Vitis riparia GN=PHYB PE=3 SV=1	[more]
F6H723_VITVI	0.0e+00	81.89	Phytochrome OS=Vitis vinifera GN=VIT_05s0077g00940 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g05280 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18790.1	0.0e+00	75.70	phytochrome B	[more]
AT4G16250.1	0.0e+00	71.94	phytochrome D	[more]
AT4G18130.1	0.0e+00	55.98	phytochrome E	[more]
AT1G09570.1	0.0e+00	52.16	phytochrome A	[more]
AT5G35840.1	0.0e+00	51.07	phytochrome C	[more]

BLAST of Cp4.1LG08g05280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076964\|ref\|XP_008438960.1\|	0.0e+00	90.50	PREDICTED: phytochrome B [Cucumis melo]	[more]
gi\|778679085\|ref\|XP_004134246.2\|	0.0e+00	90.33	PREDICTED: phytochrome B [Cucumis sativus]	[more]
gi\|1009132072\|ref\|XP_015883188.1\|	0.0e+00	82.98	PREDICTED: phytochrome B [Ziziphus jujuba]	[more]
gi\|590661925\|ref\|XP_007035807.1\|	0.0e+00	81.50	Phytochrome B isoform 1 [Theobroma cacao]	[more]
gi\|189409279\|gb\|ACC60966.1\|	0.0e+00	81.80	phytochrome B [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0018298	protein-chromophore linkage
GO:0017006	protein-tetrapyrrole linkage
GO:0009585	red, far-red light phototransduction
GO:0009584	detection of visible light
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0042803	protein homodimerization activity
GO:0009881	photoreceptor activity
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016132	Phyto_chromo_attachment
IPR013767	PAS_fold
IPR013654	PAS_2
IPR013516	Phyto_chromo_BS
IPR013515	Phytochrome_cen-reg
IPR012129	Phytochrome_A-E
IPR005467	His_kinase_dom
IPR003594	HATPase_C
IPR003018	GAF
IPR001294	Phytochrome
IPR000014	PAS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009584	detection of visible light
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0017006	protein-tetrapyrrole linkage
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0009365	protein histidine kinase complex
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0009881	photoreceptor activity
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g05280.1	Cp4.1LG08g05280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	SMART	SM00091	pas_2	coord: 761..831 score: 0.27coord: 628..695 score: 5.
IPR000014	PAS domain	TIGRFAMs	TIGR00229	TIGR00229	coord: 633..747 score: 2.
IPR000014	PAS domain	PROFILE	PS50112	PAS	coord: 762..814 score: 13.612coord: 626..697 score: 21
IPR000014	PAS domain	unknown	SSF55785	PYP-like sensor domain (PAS domain)	coord: 776..880 score: 6.28E-11coord: 89..203 score: 2.75E-24coord: 631..742 score: 4.67
IPR001294	Phytochrome	PRINTS	PR01033	PHYTOCHROME	coord: 724..741 score: 2.3E-106coord: 648..663 score: 2.3E-106coord: 559..577 score: 2.3E-106coord: 148..170 score: 2.3E-106coord: 441..461 score: 2.3E-106coord: 333..354 score: 2.3E-106coord: 526..545 score: 2.3E-106coord: 744..764 score: 2.3E-106coord: 248..267 score: 2.3E-106coord: 629..645 score: 2.3E
IPR003018	GAF domain	PFAM	PF01590	GAF	coord: 233..411 score: 2.4
IPR003018	GAF domain	SMART	SM00065	gaf_1	coord: 233..421 score: 2.2
IPR003594	Histidine kinase-like ATPase, C-terminal domain	GENE3D	G3DSA:3.30.565.10		coord: 954..1114 score: 4.4
IPR003594	Histidine kinase-like ATPase, C-terminal domain	PFAM	PF02518	HATPase_c	coord: 1000..1113 score: 1.0
IPR003594	Histidine kinase-like ATPase, C-terminal domain	SMART	SM00387	HKATPase_4	coord: 1000..1115 score: 1.5
IPR003594	Histidine kinase-like ATPase, C-terminal domain	unknown	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 963..1109 score: 3.58
IPR005467	Histidine kinase domain	PROFILE	PS50109	HIS_KIN	coord: 910..1115 score: 34
IPR012129	Phytochrome A/B/C/D/E	PIR	PIRSF000084	Phytochrome_conventional	coord: 17..1119 score:
IPR013515	Phytochrome, central region	PFAM	PF00360	PHY	coord: 423..599 score: 5.0
IPR013516	Phytochrome chromophore binding site	PROSITE	PS00245	PHYTOCHROME_1	coord: 333..342 scor
IPR013654	PAS fold-2	PFAM	PF08446	PAS_2	coord: 84..200 score: 1.4
IPR013767	PAS fold	PFAM	PF00989	PAS	coord: 629..745 score: 7.5E-23coord: 762..881 score: 3.3
IPR016132	Phytochrome chromophore attachment domain	PROFILE	PS50046	PHYTOCHROME_2	coord: 233..401 score: 66
None	No IPR available	GENE3D	G3DSA:3.30.450.20		coord: 777..881 score: 2.6E-11coord: 630..750 score: 1.7
None	No IPR available	PANTHER	PTHR24423	TWO-COMPONENT SENSOR HISTIDINE KINASE	coord: 126..552 score: 0.0coord: 626..766 score: 0.0coord: 903..1111 score:
None	No IPR available	PANTHER	PTHR24423:SF563	PHYTOCHROME E	coord: 903..1111 score: 0.0coord: 126..552 score: 0.0coord: 626..766 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g05280	Cucsa.252520	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g05280	CmaCh14G015900	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g05280	CmaCh06G015640	Cucurbita maxima (Rimu)	cmacpeB853
Cp4.1LG08g05280	CmoCh06G015600	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g05280	CmoCh14G016190	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g05280	Cla021797	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g05280	Csa3G166340	Cucumber (Chinese Long) v2	cpecuB859
Cp4.1LG08g05280	MELO3C006717	Melon (DHL92) v3.5.1	cpemeB813
Cp4.1LG08g05280	ClCG05G006570	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g05280	CSPI03G15000	Wild cucumber (PI 183967)	cpecpiB861
Cp4.1LG08g05280	Lsi05G014200	Bottle gourd (USVL1VR-Ls)	cpelsiB715
Cp4.1LG08g05280	MELO3C006717.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g05280	CsaV3_3G015190	Cucumber (Chinese Long) v3	cpecucB1056
Cp4.1LG08g05280	Bhi01G000783	Wax gourd	cpewgoB1110
Cp4.1LG08g05280	CsGy3G015120	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g05280	Carg23733	Silver-seed gourd	carcpeB1321
Cp4.1LG08g05280	Carg19620	Silver-seed gourd	carcpeB0396

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g05280	Cp4.1LG03g11870	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g05280	Cucurbita pepo (Zucchini)	cpecpeB194
Cp4.1LG08g05280	Cucurbita pepo (Zucchini)	cpecpeB343
Cp4.1LG08g05280	Cucurbita maxima (Rimu)	cmacpeB412
Cp4.1LG08g05280	Cucurbita maxima (Rimu)	cmacpeB931
Cp4.1LG08g05280	Cucurbita moschata (Rifu)	cmocpeB373
Cp4.1LG08g05280	Cucurbita moschata (Rifu)	cmocpeB866
Cp4.1LG08g05280	Bottle gourd (USVL1VR-Ls)	cpelsiB697
Cp4.1LG08g05280	Watermelon (Charleston Gray)	cpewcgB788
Cp4.1LG08g05280	Watermelon (97103) v1	cpewmB853
Cp4.1LG08g05280	Melon (DHL92) v3.5.1	cpemeB793
Cp4.1LG08g05280	Silver-seed gourd	carcpeB0109
Cp4.1LG08g05280	Silver-seed gourd	carcpeB0987
Cp4.1LG08g05280	Wax gourd	cpewgoB1102