Cp4.1LG08g03480 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g03480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic helix-loop-helix transcription factor
LocationCp4.1LG08 : 2053165 .. 2056180 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTTTTGTTTTTGTTTTTTTTTTTAATTGTTTGTTCCGAAATTTTCATGGACTTTTCGATCCCTTCCTTTTTCATTTCCCAAAATCTTCGTCGCGGAATGAGATTCCAAATTGGAGGGGAGTTGCAGTCGACGAAGATTTGATTTCAAATCAGATGGATCCATTGGAGGACCCGAGCTGTTCGGATTTTCTTGATTACTCGTTGTTCGCCGACGCCGACAACATTGTTAGCCCTTCGCTCGGTCCTCTATGGCTGCCTAATGATTTCAGGTAGTAATAATAATAAATCAGTTACTGCATTGTTTTTCTTTTTCTCTTCCTGTGGATTTTGTTGTCTCTGTTTGATTGAATGGAGAATGTTCACGAATTTGGGGATTTTGTTCCGTTTGCAGGGATGGTGGTGCGGATACGGGTGTTTCAGCCGGGCGTGTTGAATCTGAAGAAACCGATTGTTTGCGGAAGAGGTAGGTATTTTGCATGTAGCGTTATTGGATGTTCACGAACTGATATCGGTGATATGCGCTTCTTCAGTAAAGAAAATTCATGACACTGGCGCTTAGTTCTGGTTTCGGTGAAATTTTGCAAGTGCTTTGTCAATATCTTGTTCATGAATCGGACCATATTATTGCTTACAGAGTTGGAATATCAATTGTATCTAAATTGTGCTTTCCGGTTGTGGATATAGCCATTTTCGGTAGGAATTAGCATCTTGGGAAATAAGTATAATCTATGGTTCTCTTGATTTTGGTATCATTTTTCTTTTGTTAGTCAATAAGCGATTTGTTGTTATAGGATTAACTTTCTGGTGATGTTTTTGAACTTTTTCTATCAATTTTCAGTTACATCTACCTGTAATTTTCCTGCTTGGAATTTCTCAGGGTGCGAGATGAGCCGTGCACTGGACCGACTTCTAAAGCTTGTCGCGAGAGGTTGCGGAGAGGGAGATTAAATGATAGGCAAGCATTTTTTTTGTTATCCAACTCTTTTGCAATTTTACCTGCTTCTTCTTTTCATTCTTTTGTTTGATGATGATGATTGATGATAATATTGGGAGGAGAAATCTAATGGTGTTTATGATCTATGTATGATATGTTTTTTCCATCCAAGAGAGTTCAAGGTTATTATTATTTGTTTGGAATTTGCACTTCTTTGGATTTTAGGGAATAATCTAATGCTTATTTCAGTTGTTCTTAGGACATGCCGTAACGTTTTTGTTGGTGATTCGTGCAGGTTTCTAGATTTGAGCCATGCTTTAGAACCTGATAGACCTGCCAAAACTAACAAGCCTGCCATACTTGATGATGCCATTAGAGTGTTGAATCAACTCAAGACTGAAGCCGAAGAGCTCAAACAAACTAACGAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGTTAGCTATCGTATATGAAGGCCGAGTATGTTCATATCATCTTTGAAACCTGCATGGCACTATACCCTGCTATTGTATCTATATTCATCTTTATATAACTTTTTTTCCATTAAAAATTTGATTTCTTTTTGTTAAGGCATGTTCTTTCAACAATTTTTTTAAAAATTATTATGGTTAACTTGTATTTTATATTCGACGTCTTGCATCTTTAATATTTGTATGACTTAAACGGAGCCGCCTCTTGTATGAACTGCTCTGCGAGTAATTATGCTATTCTGCTGTAACATACTTCATGTATTTGGGATAGTTTATCGGTAACTCGATCAAAATGCTTTGTTAGGAATCACAACTCTCCACGATGGTATGATATTATCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGCTTCCCCAAAAGGCCTCATACCAATGGAGATAGTATTTCTCACTTATAAACCCGTGATCATTCCCTAAATTAGCCAATGTGGGACTCACTCCTAATAATTCTCAACAATCCCCCCCTTCGAACAAAGTACACTACAAGCCTCCCCTGAGGCTTATGAAGCTCTCAAATAGCCGCCCCTTAATCGAGGTTCAACTCCTTTCTCTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACACTTTAGTCACTTTTGACCACACCTTCGAGGCTCACAATTCTTTGTTCGATATTTGAGGATTCTATTGACATGACTAAGTTTAGGACATGACTCTGATACCATGTTAGGAATCACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGCTTCCCCAAAAGGCCTCATATCAATGAAGATAGTATTCTTGCTTTGGGGTTCACCAAAAGGCCTCATACCAATGGATATAGTATCTAATTAAAAAGGTAGTATAAACCCATGATCATTCCCTAAATTAGCCAACGTAGGACTCACTCCCAATTATCTTCAACATGCTTCTAGCTTGTATTGTATCTAATTAAAAAGGTTGTGTGATGTTTAGTGACATGTCCACAAGTATATTTTGGAAATTTTGTGATCTCTCAGCATCAGTTCAAAGTGTTTTTGCTTGATTTTAACAGGCAGAGAAGAATGATCTTCGGAAGGAGAAAACAATTTTGAAGGAAGACAAAGAAAGAATCGAGCAACAGTTGAAATCTATAGCCATTCCACCTCCAGGGCTTATCCCAGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCAGGTTATGGTTTGATACCAATGTGGCCATATCTTCCTCCATCAGTATGTGATACTTCTCAAGATCATGAGCTCAGGCCTCCTGCTGCTTAGTTAGTTTTGCCATCTTTAAACGAATAAACTATCACTTTCTTTCATCCATCCATTTTTGTTCACCAACATGCTGCAAATATTTCTCTCAACTCATTTCCTTATTTGTCTTTTAAAACTTCTAGTTGCTAAATGGAAGCAGCATTTCGTTTCGTTCTTTTAGTAATTGGATTTAACTTTGTGGGTTATCATCTTATGTAAATATATTGATGTTCTGAACTTTTGCATTCACGGGTATTGAATAATAGACTTTCTTGTTC

mRNA sequence

ATCTTTTTGTTTTTGTTTTTTTTTTTAATTGTTTGTTCCGAAATTTTCATGGACTTTTCGATCCCTTCCTTTTTCATTTCCCAAAATCTTCGTCGCGGAATGAGATTCCAAATTGGAGGGGAGTTGCAGTCGACGAAGATTTGATTTCAAATCAGATGGATCCATTGGAGGACCCGAGCTGTTCGGATTTTCTTGATTACTCGTTGTTCGCCGACGCCGACAACATTGTTAGCCCTTCGCTCGGTCCTCTATGGCTGCCTAATGATTTCAGGGATGGTGGTGCGGATACGGGTGTTTCAGCCGGGCGTGTTGAATCTGAAGAAACCGATTGTTTGCGGAAGAGGGTGCGAGATGAGCCGTGCACTGGACCGACTTCTAAAGCTTGTCGCGAGAGGTTGCGGAGAGGGAGATTAAATGATAGGCAAGCATTTTTTTTGTTTCTAGATTTGAGCCATGCTTTAGAACCTGATAGACCTGCCAAAACTAACAAGCCTGCCATACTTGATGATGCCATTAGAGTGTTGAATCAACTCAAGACTGAAGCCGAAGAGCTCAAACAAACTAACGAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGCAGAGAAGAATGATCTTCGGAAGGAGAAAACAATTTTGAAGGAAGACAAAGAAAGAATCGAGCAACAGTTGAAATCTATAGCCATTCCACCTCCAGGGCTTATCCCAGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCAGGTTATGGTTTGATACCAATGTGGCCATATCTTCCTCCATCAGTATGTGATACTTCTCAAGATCATGAGCTCAGGCCTCCTGCTGCTTAGTTAGTTTTGCCATCTTTAAACGAATAAACTATCACTTTCTTTCATCCATCCATTTTTGTTCACCAACATGCTGCAAATATTTCTCTCAACTCATTTCCTTATTTGTCTTTTAAAACTTCTAGTTGCTAAATGGAAGCAGCATTTCGTTTCGTTCTTTTAGTAATTGGATTTAACTTTGTGGGTTATCATCTTATGTAAATATATTGATGTTCTGAACTTTTGCATTCACGGGTATTGAATAATAGACTTTCTTGTTC

Coding sequence (CDS)

ATGGATCCATTGGAGGACCCGAGCTGTTCGGATTTTCTTGATTACTCGTTGTTCGCCGACGCCGACAACATTGTTAGCCCTTCGCTCGGTCCTCTATGGCTGCCTAATGATTTCAGGGATGGTGGTGCGGATACGGGTGTTTCAGCCGGGCGTGTTGAATCTGAAGAAACCGATTGTTTGCGGAAGAGGGTGCGAGATGAGCCGTGCACTGGACCGACTTCTAAAGCTTGTCGCGAGAGGTTGCGGAGAGGGAGATTAAATGATAGGCAAGCATTTTTTTTGTTTCTAGATTTGAGCCATGCTTTAGAACCTGATAGACCTGCCAAAACTAACAAGCCTGCCATACTTGATGATGCCATTAGAGTGTTGAATCAACTCAAGACTGAAGCCGAAGAGCTCAAACAAACTAACGAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGCAGAGAAGAATGATCTTCGGAAGGAGAAAACAATTTTGAAGGAAGACAAAGAAAGAATCGAGCAACAGTTGAAATCTATAGCCATTCCACCTCCAGGGCTTATCCCAGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCAGGTTATGGTTTGATACCAATGTGGCCATATCTTCCTCCATCAGTATGTGATACTTCTCAAGATCATGAGCTCAGGCCTCCTGCTGCTTAG

Protein sequence

MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA
Homology
[Close]
BLAST of Cp4.1LG08g03480 vs. Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 111/192 (57.81%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 44  DTGVSAGRVESEET----DCLRKRVRDEPCT-GPTSKACRERLRRGRLNDRQAFFLFLDL 103
           ++G S G V+ E+     DC RKR R   C+ G  +KACRERLRR +LN+R     F+DL
Sbjct: 99  NSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNER-----FMDL 158

Query: 104 SHALEPDRPAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEK 163
           S  LEP R  KT+KPAILDDAIR+LNQL+ EA +L++TN+KL EE++ LKAEKN+LR+EK
Sbjct: 159 SSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEK 218

Query: 164 TILKEDKERIEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCD 223
            +LK DKE+ EQQLKS+  P  G IP  PAA++    KMAV+P YG +PMW Y+P SV D
Sbjct: 219 LVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFN--HNKMAVYPSYGYMPMWHYMPQSVRD 278

Query: 224 TSQDHELRPPAA 231
           TS+D ELRPPAA
Sbjct: 279 TSRDQELRPPAA 283

[Close]
BLAST of Cp4.1LG08g03480 vs. Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 1 

Query: 48  SAGRVESE-ETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDR 107
           S G V+ E E +C  KR R   C+ P +KACRE+LRR +LND+     F+DLS  LEP R
Sbjct: 139 SVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDK-----FMDLSSVLEPGR 198

Query: 108 PAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKE 167
             KT+K AILDDAIRV+NQL+ EA EL++TN+KL EE++ LKA+KN+LR+EK +LK +KE
Sbjct: 199 TPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKE 258

Query: 168 RIEQQLKSIAIPPPGLIPG-HPAAYHAAPGKMAVFPGYGL----IPMWPYLPPSVCDTSQ 227
           ++EQQLKS+ +P PG +P  HPAA+H+   KMAV   YG     +PMW  LPP+  DTS+
Sbjct: 259 KMEQQLKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPMWSPLPPADRDTSR 318

Query: 228 DHELRPPAA 231
           D +  PP A
Sbjct: 319 DLKNLPPVA 320

[Close]
BLAST of Cp4.1LG08g03480 vs. Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-35
Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 1 

Query: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAI 120
           RKR++ E CTG  SKACRE+ RR RLND+     F +LS  LEP R  KT+K AI++DAI
Sbjct: 57  RKRIKTESCTGSNSKACREKQRRDRLNDK-----FTELSSVLEPGRTPKTDKVAIINDAI 116

Query: 121 RVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAI--- 180
           R++NQ + EA++LK  N  L+E+++ LK EKN+LR EK  LK +KERI+QQLK+I     
Sbjct: 117 RMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQ 176

Query: 181 PPPGLIPGHPAAYHA-APG-KMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           P P  +P       A APG K+  F  Y    MW ++PP+  DTSQDH LRPP A
Sbjct: 177 PQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]
BLAST of Cp4.1LG08g03480 vs. Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-34
Identity = 87/191 (45.55%), Postives = 120/191 (62.83%), Query Frame = 1 

Query: 48  SAGRVESEETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRP 107
           SAG  E+ +    +KR R E  +  +SKACRE+ RR RLND+     F++L   LEP  P
Sbjct: 49  SAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDK-----FMELGAILEPGNP 108

Query: 108 AKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKER 167
            KT+K AIL DA+R++ QL+ EA++LK +N  L+++++ LK EKN+LR EK  LK +KE+
Sbjct: 109 PKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEK 168

Query: 168 IEQQLKSIAIPPPGLIPGHP-------AAYHAAPG-KMAVFPGYGLIPMWPYLPPSVCDT 227
           +EQQLK++  P P   P  P       +A   APG KM     Y  + MW ++PP+  DT
Sbjct: 169 LEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDT 228

Query: 228 SQDHELRPPAA 231
           SQDH LRPP A
Sbjct: 229 SQDHVLRPPVA 234

[Close]
BLAST of Cp4.1LG08g03480 vs. Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 1 

Query: 73  TSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAIRVLNQLKTEAEE 132
           + KA RE+LRR +LN+      F++L + L+P+RP K +K  IL D +++L +L +E  +
Sbjct: 61  SQKAGREKLRREKLNEH-----FVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNK 120

Query: 133 LKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERI----EQQLKSIAIPPPGLIPGHP- 192
           LK     L +E   L  EKNDLR+EKT LK D E +    +Q+L+S++  P G    H  
Sbjct: 121 LKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMS--PWGAAMDHTV 180

Query: 193 --AAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRP 228
             A   + P  M +    G IPM P +P      +Q+  + P
Sbjct: 181 MMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIP 214

[Close]
BLAST of Cp4.1LG08g03480 vs. TrEMBL
Match: A0A0A0L755_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G135660 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.7e-92
Identity = 183/231 (79.22%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFR-DGGADTGVSAGRVESEETDC 60
           MDPLED SC DFLD S F DADN+++PSL P W PN  R D  ADT VSAG +ESEE DC
Sbjct: 1   MDPLEDSSCWDFLDCSFFPDADNLINPSLHPFWPPNHSRRDSLADTDVSAGHLESEENDC 60

Query: 61  LRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDA 120
            RKR RD  C G +SKACRERLRR +LNDR     FLDLS ALEP R  KTNKPAILDDA
Sbjct: 61  SRKRARDGSCAGASSKACRERLRREKLNDR-----FLDLSIALEPSRHTKTNKPAILDDA 120

Query: 121 IRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPP 180
           IRVLNQLK EAEELKQTNEKLREEVE LKAEKNDLRKEK ILKEDKE++EQQLKSIAIP 
Sbjct: 121 IRVLNQLKNEAEELKQTNEKLREEVESLKAEKNDLRKEKIILKEDKEKMEQQLKSIAIPS 180

Query: 181 PGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           PGLIPGHPAAYHAA GKMAVFPGYGLIPMW YLPPS+ DTSQDHELRPPAA
Sbjct: 181 PGLIPGHPAAYHAASGKMAVFPGYGLIPMWQYLPPSIRDTSQDHELRPPAA 226

[Close]
BLAST of Cp4.1LG08g03480 vs. TrEMBL
Match: B9STH6_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0491730 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-64
Identity = 138/230 (60.00%), Postives = 166/230 (72.17%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCL 60
           MD LE+ SC DFLDYS   +     + S   LW PN   +       S+G   SEE  C 
Sbjct: 1   MDSLEEGSCWDFLDYSFIEET----TTSSDLLW-PNSNNNLSEIDFSSSGGAVSEEKQCS 60

Query: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAI 120
           RKR R + C+ P +KACRE+LRR RLNDR     F DLS  LEP+RPA+T+KP++LDDAI
Sbjct: 61  RKRARGDSCSKPVTKACREKLRRERLNDR-----FQDLSSVLEPERPARTDKPSLLDDAI 120

Query: 121 RVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPP 180
           RVLNQLKTEA+ELK+TNEKL EE++CLKAEKN+LR+EK  LK DKER EQQLK +A+ PP
Sbjct: 121 RVLNQLKTEAQELKETNEKLLEEIKCLKAEKNELREEKLTLKADKERTEQQLKIMAVRPP 180

Query: 181 GLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           G +P HPAAYHAA  KMA++P +GLIPMW  LPP+  DTS+DHE  PPAA
Sbjct: 181 GYMPAHPAAYHAAMNKMAIYPSFGLIPMW-QLPPAAQDTSKDHEYWPPAA 219

[Close]
BLAST of Cp4.1LG08g03480 vs. TrEMBL
Match: A0A061ENR0_THECC (Basic helix-loop-helix DNA-binding superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020866 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.2e-63
Identity = 143/235 (60.85%), Postives = 169/235 (71.91%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRV-----ESE 60
           MD +ED    DFLDYS     D   SP L    LPN + DG  +  +S+G V     E E
Sbjct: 1   MDSIED---WDFLDYSFI---DENTSPDL---LLPN-YSDG-REIELSSGNVVHQEKEFE 60

Query: 61  ETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAI 120
           + DC RKR R   C+ P +KACRERLRR RLN+R     FLDLS  LEP RPA+T+K AI
Sbjct: 61  DRDCSRKRGRSGSCSRPGTKACRERLRRERLNER-----FLDLSSILEPGRPARTDKSAI 120

Query: 121 LDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSI 180
           LDDAIRVL QL+TEA+ELK+TNEKL+EE++ LKAEKN+LR+EK +LK +KE+IEQQLK++
Sbjct: 121 LDDAIRVLTQLRTEAQELKETNEKLQEEIKSLKAEKNELREEKLVLKGNKEKIEQQLKTM 180

Query: 181 AIPPPGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
            IPP G +P HPAAYH    KMAVFPGYGL+PMW YLP S  DTS DHELRPPAA
Sbjct: 181 TIPPAGYLPAHPAAYHPGASKMAVFPGYGLVPMWQYLPQSARDTSHDHELRPPAA 219

[Close]
BLAST of Cp4.1LG08g03480 vs. TrEMBL
Match: A0A059AVD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00174 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-62
Identity = 146/250 (58.40%), Postives = 164/250 (65.60%), Query Frame = 1 

Query: 5   EDPSCSDFLDYS-LFADADNIVSPSLGPLWLPN---------------------DFRDGG 64
           +DPSC DFLD S LFADAD    P L  LW P                      DF  GG
Sbjct: 11  DDPSCWDFLDCSSLFADADGGAPPPL--LWPPPPPPPPHDRRHHPGAAAAAVAVDFPAGG 70

Query: 65  ADT-GVSAGRVESEETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHA 124
            D+ G   G  +S      RKR R+E C+ P +KACRE+LRR RLNDR     FLDLS  
Sbjct: 71  VDSAGDELGGAQSS-----RKRGRNEACSQPRTKACREKLRRERLNDR-----FLDLSSV 130

Query: 125 LEPDRPAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTIL 184
           LEP R  KT KPAILDDAIRVL QLK E+EELK TNEKL EE++CLKAEKN+LR+EK  L
Sbjct: 131 LEPGRSVKTEKPAILDDAIRVLTQLKAESEELKDTNEKLLEEIKCLKAEKNELREEKLSL 190

Query: 185 KEDKERIEQQLKSIAIPPPGLIPGHP-AAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTS 231
           K DKER+EQQLK++ +PP G +P HP AAYHA   KM VFP YG IPMW Y+PPS  DTS
Sbjct: 191 KADKERMEQQLKAMTVPPAGFVPPHPAAAYHAGANKMPVFPSYGFIPMWQYMPPSARDTS 248

[Close]
BLAST of Cp4.1LG08g03480 vs. TrEMBL
Match: A0A067ER77_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028060mg PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.1e-62
Identity = 136/226 (60.18%), Postives = 167/226 (73.89%), Query Frame = 1 

Query: 6   DPS-CSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCLRKRV 65
           DPS   DF++YS      N  + SL   W     ++G AD  +S+  V   E +  RKR 
Sbjct: 2   DPSDWDDFINYSF-----NDQNASLDFSWPE---QNGSADNDISSTGVVPPENENTRKRA 61

Query: 66  RDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAIRVLN 125
           R + C+ P SKACRE+LRR RLNDR     FLDLS  LEP RPA+T+KPAILDDAIRVLN
Sbjct: 62  RSDSCSRPGSKACREKLRRERLNDR-----FLDLSCILEPGRPARTDKPAILDDAIRVLN 121

Query: 126 QLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPPGLIP 185
           QL+TE++ELK+TNEKL+EE++ LKAEKN+LR+EK ILK DKE++EQQLK +A+P  G +P
Sbjct: 122 QLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMAMPTGGYMP 181

Query: 186 GHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
            HPAAYHA   KMAV+P YGL+PMW YLPPS+ DTS+DHELRPPAA
Sbjct: 182 THPAAYHAGLNKMAVYPSYGLMPMWQYLPPSLHDTSRDHELRPPAA 214

[Close]
BLAST of Cp4.1LG08g03480 vs. TAIR10
Match: AT4G14410.1 (AT4G14410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 197.6 bits (501), Expect = 8.4e-51
Identity = 111/192 (57.81%), Postives = 140/192 (72.92%), Query Frame = 1 

Query: 44  DTGVSAGRVESEET----DCLRKRVRDEPCT-GPTSKACRERLRRGRLNDRQAFFLFLDL 103
           ++G S G V+ E+     DC RKR R   C+ G  +KACRERLRR +LN+R     F+DL
Sbjct: 99  NSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNER-----FMDL 158

Query: 104 SHALEPDRPAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEK 163
           S  LEP R  KT+KPAILDDAIR+LNQL+ EA +L++TN+KL EE++ LKAEKN+LR+EK
Sbjct: 159 SSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEK 218

Query: 164 TILKEDKERIEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCD 223
            +LK DKE+ EQQLKS+  P  G IP  PAA++    KMAV+P YG +PMW Y+P SV D
Sbjct: 219 LVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFN--HNKMAVYPSYGYMPMWHYMPQSVRD 278

Query: 224 TSQDHELRPPAA 231
           TS+D ELRPPAA
Sbjct: 279 TSRDQELRPPAA 283

[Close]
BLAST of Cp4.1LG08g03480 vs. TAIR10
Match: AT3G23210.1 (AT3G23210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 174.9 bits (442), Expect = 5.9e-44
Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 1 

Query: 48  SAGRVESE-ETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDR 107
           S G V+ E E +C  KR R   C+ P +KACRE+LRR +LND+     F+DLS  LEP R
Sbjct: 139 SVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDK-----FMDLSSVLEPGR 198

Query: 108 PAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKE 167
             KT+K AILDDAIRV+NQL+ EA EL++TN+KL EE++ LKA+KN+LR+EK +LK +KE
Sbjct: 199 TPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKE 258

Query: 168 RIEQQLKSIAIPPPGLIPG-HPAAYHAAPGKMAVFPGYGL----IPMWPYLPPSVCDTSQ 227
           ++EQQLKS+ +P PG +P  HPAA+H+   KMAV   YG     +PMW  LPP+  DTS+
Sbjct: 259 KMEQQLKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPMWSPLPPADRDTSR 318

Query: 228 DHELRPPAA 231
           D +  PP A
Sbjct: 319 DLKNLPPVA 320

[Close]
BLAST of Cp4.1LG08g03480 vs. TAIR10
Match: AT1G51070.2 (AT1G51070.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 1 

Query: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAI 120
           RKR++ E CTG  SKACRE+ RR RLND+     F +LS  LEP R  KT+K AI++DAI
Sbjct: 123 RKRIKTESCTGSNSKACREKQRRDRLNDK-----FTELSSVLEPGRTPKTDKVAIINDAI 182

Query: 121 RVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAI--- 180
           R++NQ + EA++LK  N  L+E+++ LK EKN+LR EK  LK +KERI+QQLK+I     
Sbjct: 183 RMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQ 242

Query: 181 PPPGLIPGHPAAYHA-APG-KMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           P P  +P       A APG K+  F  Y    MW ++PP+  DTSQDH LRPP A
Sbjct: 243 PQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 292

[Close]
BLAST of Cp4.1LG08g03480 vs. TAIR10
Match: AT5G54680.1 (AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-35
Identity = 87/191 (45.55%), Postives = 120/191 (62.83%), Query Frame = 1 

Query: 48  SAGRVESEETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRP 107
           SAG  E+ +    +KR R E  +  +SKACRE+ RR RLND+     F++L   LEP  P
Sbjct: 49  SAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDK-----FMELGAILEPGNP 108

Query: 108 AKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKER 167
            KT+K AIL DA+R++ QL+ EA++LK +N  L+++++ LK EKN+LR EK  LK +KE+
Sbjct: 109 PKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEK 168

Query: 168 IEQQLKSIAIPPPGLIPGHP-------AAYHAAPG-KMAVFPGYGLIPMWPYLPPSVCDT 227
           +EQQLK++  P P   P  P       +A   APG KM     Y  + MW ++PP+  DT
Sbjct: 169 LEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDT 228

Query: 228 SQDHELRPPAA 231
           SQDH LRPP A
Sbjct: 229 SQDHVLRPPVA 234

[Close]
BLAST of Cp4.1LG08g03480 vs. TAIR10
Match: AT3G19860.2 (AT3G19860.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 7.0e-13
Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 1 

Query: 73  TSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAIRVLNQLKTEAEE 132
           + KA RE+LRR +LN+      F++L + L+P+RP K +K  IL D +++L +L +E  +
Sbjct: 61  SQKAGREKLRREKLNEH-----FVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNK 120

Query: 133 LKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERI----EQQLKSIAIPPPGLIPGHP- 192
           LK     L +E   L  EKNDLR+EKT LK D E +    +Q+L+S++  P G    H  
Sbjct: 121 LKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMS--PWGAAMDHTV 180

Query: 193 --AAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRP 228
             A   + P  M +    G IPM P +P      +Q+  + P
Sbjct: 181 MMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIP 214

[Close]
BLAST of Cp4.1LG08g03480 vs. NCBI nr
Match: gi|659076171|ref|XP_008438540.1| (PREDICTED: transcription factor bHLH104-like [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93
Identity = 183/231 (79.22%), Postives = 195/231 (84.42%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGG-ADTGVSAGRVESEETDC 60
           MDPLED SC DFLD S F DADN+++PSL PLW PND R G  ADT VSAGRVESEE DC
Sbjct: 1   MDPLEDSSCWDFLDCSFFPDADNLINPSLDPLWPPNDSRKGSLADTDVSAGRVESEENDC 60

Query: 61  LRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDA 120
            RKR RD  C GP+SKACRERLRR +LNDR     FLDLS ALEP R  KTNKPAILDDA
Sbjct: 61  SRKRTRDGSCAGPSSKACRERLRREKLNDR-----FLDLSIALEPSRHTKTNKPAILDDA 120

Query: 121 IRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPP 180
           IRVLNQLK EAE+LKQTNEKLREE++ LKAEKNDLRKEK ILKE+KE++EQQLKSIAIP 
Sbjct: 121 IRVLNQLKNEAEDLKQTNEKLREELKNLKAEKNDLRKEKIILKEEKEKMEQQLKSIAIPS 180

Query: 181 PGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           PGLIPGHPA YHAA GKMAVFPGYGLIPMW YLPPS+ DTSQDHELRPPAA
Sbjct: 181 PGLIPGHPATYHAASGKMAVFPGYGLIPMWQYLPPSIRDTSQDHELRPPAA 226

[Close]
BLAST of Cp4.1LG08g03480 vs. NCBI nr
Match: gi|449432566|ref|XP_004134070.1| (PREDICTED: transcription factor bHLH104-like [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 2.4e-92
Identity = 183/231 (79.22%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFR-DGGADTGVSAGRVESEETDC 60
           MDPLED SC DFLD S F DADN+++PSL P W PN  R D  ADT VSAG +ESEE DC
Sbjct: 1   MDPLEDSSCWDFLDCSFFPDADNLINPSLHPFWPPNHSRRDSLADTDVSAGHLESEENDC 60

Query: 61  LRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDA 120
            RKR RD  C G +SKACRERLRR +LNDR     FLDLS ALEP R  KTNKPAILDDA
Sbjct: 61  SRKRARDGSCAGASSKACRERLRREKLNDR-----FLDLSIALEPSRHTKTNKPAILDDA 120

Query: 121 IRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPP 180
           IRVLNQLK EAEELKQTNEKLREEVE LKAEKNDLRKEK ILKEDKE++EQQLKSIAIP 
Sbjct: 121 IRVLNQLKNEAEELKQTNEKLREEVESLKAEKNDLRKEKIILKEDKEKMEQQLKSIAIPS 180

Query: 181 PGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           PGLIPGHPAAYHAA GKMAVFPGYGLIPMW YLPPS+ DTSQDHELRPPAA
Sbjct: 181 PGLIPGHPAAYHAASGKMAVFPGYGLIPMWQYLPPSIRDTSQDHELRPPAA 226

[Close]
BLAST of Cp4.1LG08g03480 vs. NCBI nr
Match: gi|255576818|ref|XP_002529295.1| (PREDICTED: transcription factor bHLH104 [Ricinus communis])

HSP 1 Score: 252.7 bits (644), Expect = 6.3e-64
Identity = 138/230 (60.00%), Postives = 166/230 (72.17%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCL 60
           MD LE+ SC DFLDYS   +     + S   LW PN   +       S+G   SEE  C 
Sbjct: 1   MDSLEEGSCWDFLDYSFIEET----TTSSDLLW-PNSNNNLSEIDFSSSGGAVSEEKQCS 60

Query: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAILDDAI 120
           RKR R + C+ P +KACRE+LRR RLNDR     F DLS  LEP+RPA+T+KP++LDDAI
Sbjct: 61  RKRARGDSCSKPVTKACREKLRRERLNDR-----FQDLSSVLEPERPARTDKPSLLDDAI 120

Query: 121 RVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPP 180
           RVLNQLKTEA+ELK+TNEKL EE++CLKAEKN+LR+EK  LK DKER EQQLK +A+ PP
Sbjct: 121 RVLNQLKTEAQELKETNEKLLEEIKCLKAEKNELREEKLTLKADKERTEQQLKIMAVRPP 180

Query: 181 GLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
           G +P HPAAYHAA  KMA++P +GLIPMW  LPP+  DTS+DHE  PPAA
Sbjct: 181 GYMPAHPAAYHAAMNKMAIYPSFGLIPMW-QLPPAAQDTSKDHEYWPPAA 219

[Close]
BLAST of Cp4.1LG08g03480 vs. NCBI nr
Match: gi|590659286|ref|XP_007035086.1| (Basic helix-loop-helix DNA-binding superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 143/235 (60.85%), Postives = 169/235 (71.91%), Query Frame = 1 

Query: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRV-----ESE 60
           MD +ED    DFLDYS     D   SP L    LPN + DG  +  +S+G V     E E
Sbjct: 1   MDSIED---WDFLDYSFI---DENTSPDL---LLPN-YSDG-REIELSSGNVVHQEKEFE 60

Query: 61  ETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHALEPDRPAKTNKPAI 120
           + DC RKR R   C+ P +KACRERLRR RLN+R     FLDLS  LEP RPA+T+K AI
Sbjct: 61  DRDCSRKRGRSGSCSRPGTKACRERLRRERLNER-----FLDLSSILEPGRPARTDKSAI 120

Query: 121 LDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSI 180
           LDDAIRVL QL+TEA+ELK+TNEKL+EE++ LKAEKN+LR+EK +LK +KE+IEQQLK++
Sbjct: 121 LDDAIRVLTQLRTEAQELKETNEKLQEEIKSLKAEKNELREEKLVLKGNKEKIEQQLKTM 180

Query: 181 AIPPPGLIPGHPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 231
            IPP G +P HPAAYH    KMAVFPGYGL+PMW YLP S  DTS DHELRPPAA
Sbjct: 181 TIPPAGYLPAHPAAYHPGASKMAVFPGYGLVPMWQYLPQSARDTSHDHELRPPAA 219

[Close]
BLAST of Cp4.1LG08g03480 vs. NCBI nr
Match: gi|702432168|ref|XP_010069141.1| (PREDICTED: transcription factor bHLH104-like [Eucalyptus grandis])

HSP 1 Score: 247.7 bits (631), Expect = 2.0e-62
Identity = 146/250 (58.40%), Postives = 164/250 (65.60%), Query Frame = 1 

Query: 5   EDPSCSDFLDYS-LFADADNIVSPSLGPLWLPN---------------------DFRDGG 64
           +DPSC DFLD S LFADAD    P L  LW P                      DF  GG
Sbjct: 11  DDPSCWDFLDCSSLFADADGGAPPPL--LWPPPPPPPPHDRRHHPGAAAAAVAVDFPAGG 70

Query: 65  ADT-GVSAGRVESEETDCLRKRVRDEPCTGPTSKACRERLRRGRLNDRQAFFLFLDLSHA 124
            D+ G   G  +S      RKR R+E C+ P +KACRE+LRR RLNDR     FLDLS  
Sbjct: 71  VDSAGDELGGAQSS-----RKRGRNEACSQPRTKACREKLRRERLNDR-----FLDLSSV 130

Query: 125 LEPDRPAKTNKPAILDDAIRVLNQLKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTIL 184
           LEP R  KT KPAILDDAIRVL QLK E+EELK TNEKL EE++CLKAEKN+LR+EK  L
Sbjct: 131 LEPGRSVKTEKPAILDDAIRVLTQLKAESEELKDTNEKLLEEIKCLKAEKNELREEKLSL 190

Query: 185 KEDKERIEQQLKSIAIPPPGLIPGHP-AAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTS 231
           K DKER+EQQLK++ +PP G +P HP AAYHA   KM VFP YG IPMW Y+PPS  DTS
Sbjct: 191 KADKERMEQQLKAMTVPPAGFVPPHPAAAYHAGANKMPVFPSYGFIPMWQYMPPSARDTS 248

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g03480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH104_ARATH1.5e-4957.81Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1[more]
BH034_ARATH1.0e-4253.97Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1[more]
BH115_ARATH2.1e-3550.86Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1[more]
ILR3_ARATH1.8e-3445.55Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1[more]
BH121_ARATH1.2e-1135.80Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1[more]
BLAST of Cp4.1LG08g03480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L755_CUCSA1.7e-9279.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G135660 PE=4 SV=1[more]
B9STH6_RICCO4.4e-6460.00DNA binding protein, putative OS=Ricinus communis GN=RCOM_0491730 PE=4 SV=1[more]
A0A061ENR0_THECC8.2e-6360.85Basic helix-loop-helix DNA-binding superfamily protein isoform 1 OS=Theobroma ca... [more]
A0A059AVD8_EUCGR1.4e-6258.40Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00174 PE=4 SV=1[more]
A0A067ER77_CITSI9.1e-6260.18Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028060mg PE=4 SV=1[more]
BLAST of Cp4.1LG08g03480 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14410.18.4e-5157.81 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G23210.15.9e-4453.97 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G51070.21.2e-3650.86 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G54680.11.0e-3545.55 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G19860.27.0e-1335.80 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Cp4.1LG08g03480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076171|ref|XP_008438540.1|1.3e-9379.22PREDICTED: transcription factor bHLH104-like [Cucumis melo][more]
gi|449432566|ref|XP_004134070.1|2.4e-9279.22PREDICTED: transcription factor bHLH104-like [Cucumis sativus][more]
gi|255576818|ref|XP_002529295.1|6.3e-6460.00PREDICTED: transcription factor bHLH104 [Ricinus communis][more]
gi|590659286|ref|XP_007035086.1|1.2e-6260.85Basic helix-loop-helix DNA-binding superfamily protein isoform 1 [Theobroma caca... [more]
gi|702432168|ref|XP_010069141.1|2.0e-6258.40PREDICTED: transcription factor bHLH104-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g03480.1Cp4.1LG08g03480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 74..148
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 73..146
score: 2.7
NoneNo IPR availableunknownCoilCoilcoord: 116..171
scor
NoneNo IPR availablePANTHERPTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAScoord: 1..230
score: 5.8
NoneNo IPR availablePANTHERPTHR23042:SF72TRANSCRIPTION FACTOR BHLH104-RELATEDcoord: 1..230
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g03480Cucsa.255290Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g03480CmaCh14G018060Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g03480CmaCh06G013330Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g03480CmoCh06G013370Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g03480CmoCh14G018420Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g03480Cla021529Watermelon (97103) v1cpewmB845
Cp4.1LG08g03480Csa3G135660Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g03480MELO3C006435Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g03480ClCG05G004380Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g03480CSPI03G12070Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g03480Lsi05G017190Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g03480MELO3C006435.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g03480CsaV3_3G012210Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g03480BhiUN533G33Wax gourdcpewgoB1122
Cp4.1LG08g03480CsGy3G012200Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g03480Carg06213Silver-seed gourdcarcpeB1333
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g03480Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g03480Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG08g03480Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g03480Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g03480Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG08g03480Cucumber (Gy14) v1cgycpeB1012
Cp4.1LG08g03480Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g03480Cucurbita maxima (Rimu)cmacpeB554
Cp4.1LG08g03480Cucurbita maxima (Rimu)cmacpeB650
Cp4.1LG08g03480Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g03480Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g03480Cucurbita moschata (Rifu)cmocpeB507
Cp4.1LG08g03480Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g03480Wild cucumber (PI 183967)cpecpiB851
Cp4.1LG08g03480Cucumber (Chinese Long) v2cpecuB849
Cp4.1LG08g03480Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g03480Bottle gourd (USVL1VR-Ls)cpelsiB704
Cp4.1LG08g03480Bottle gourd (USVL1VR-Ls)cpelsiB716
Cp4.1LG08g03480Watermelon (Charleston Gray)cpewcgB762
Cp4.1LG08g03480Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g03480Watermelon (Charleston Gray)cpewcgB792
Cp4.1LG08g03480Watermelon (97103) v1cpewmB823
Cp4.1LG08g03480Watermelon (97103) v1cpewmB841
Cp4.1LG08g03480Watermelon (97103) v1cpewmB853
Cp4.1LG08g03480Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g03480Cucumber (Gy14) v2cgybcpeB278
Cp4.1LG08g03480Melon (DHL92) v3.6.1cpemedB944
Cp4.1LG08g03480Silver-seed gourdcarcpeB0329
Cp4.1LG08g03480Silver-seed gourdcarcpeB0336
Cp4.1LG08g03480Silver-seed gourdcarcpeB1101
Cp4.1LG08g03480Silver-seed gourdcarcpeB1507
Cp4.1LG08g03480Cucumber (Chinese Long) v3cpecucB1045
Cp4.1LG08g03480Wax gourdcpewgoB1100
Cp4.1LG08g03480Wax gourdcpewgoB1118