Cp4.1LG08g03320 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG08g03320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description60S ribosomal protein L14, putative
LocationCp4.1LG08 : 2117288 .. 2123635 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGAACCAATTATCTGGACCCAGAACAGAGGAAAGAACCCTAGGCTCGTCGCCCGTCTCTGTAAAACCCTACAGCCGGAAGATGGTGAGGCTTCTCTTCCTTCGTATTTCTTCTCCTAACTACGAATCGACAGCGCATGGTGGTGGTGTTTTCTTCCTGAGTTTATGTTCTGCGGATTGTTTATGAATTTCGTGTTTTCTGAATTGTTTCTGTAGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGGAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTATTACTTTTTAGTTTGAATTTGTATCAATCCCCTTGACATTCATAAGCCACGGAAAACGGTAGCGCTATGCTTCCCCTCTCCTTTGTTTCTTCTGAATTTGATGTTTGCGTTATGATCTAAACATATTAATATCATAAAATTCTGCTATTTATTATCTAGGAAAATTATTTCATAGCTTTTTCAAGTTTGAAGTGATAATTGTTGAAATAATATACAGCATTCCTTATTTAACTTTATGTTCATTTAGTAGGTCGCTAATTAGTGGTCATTGAATCAGTAGTTGGGTTGAGGATGATGCAAATTACTACTGATTGATGGTTAGCTTGAACTGTTTTCTCTGGCTGATTCTCCAGAAACCAAAAGGGGTGTTTTGTTGGTTGTTCAAATTTATGGTTGTTTGATGCGCTGATGATTTTAATTGTTTTTGGGACTTCTCGTGAGTCTACAAATACAGATGTATGTCGTACTGGATGTTTGTAAACATTCATGCTTGTTTCAATGGATATGTTCCATTTTTTCTTTCCCTACTGAATTTGATTCTACAGTACCCAATTGTCTTTTGTAGAAAAGAAAGGATTTGGATGGATTTGGCATATGCATGCATTTTATGTTGTTATTTCCTGGTGACTTGGGTTTAGTTTTTTCAATATTTGACTAGTTGCTAACAACACGAGCATAGCTCAACTATTAAGTCGTTTTTACTTCCTCTGAGAGGTTGTAAGTTCGAATCCCTTCCTCCATGTGATATAACACTCGATTTTTTTATTTTATTAGTTGTTCATGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTTACTCCATTGGTATGAGGCCTTTTGGGGAAACCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATGGTATCAGAGCCATGCTCTAAACTTAGTCGTACCAATAGATTGGTAAATCCTCATATATCGAACAAAGAACTCCAAAAGAAAAAGGAGTCAAGCCTCCTCGAAGGCAGTCAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGGAGGCGCACTTTGTTCGAGGGGAGGTGTTGGATGATGGAAGTCCCACAACGACTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTTACTCCATTGGTATTAGGCCTTTTGGGGAAACCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAGTTCATTCTATGTATTTTTTTTAATGCTACTGTGTACAGGCTCTGGTGGATGCTCCTGATATGGTCAGGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGGTATGCTTTTCAACTGATTTCACTTTCAAATACTTAATTCTTCTACTACCACCCTCAATTGGGGTGTTGTTTTTGTTTGCCTCAAGTCTAACCCATTGTTTCGGTCATGTCAGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGGTCAGTGATGATATGTGACGCGTCTGTACTTTCTCTTGTTCCCCCCACCCTCTTTCTTTAGCATCGACAAGTATAAGAGCTCTAAACCCGCTGTTTCTCTCGTGTTCTTGATTCATGGCAACCTATTTCTCAAATGGATATTATTTATATTTTTGCAGAGAGCTGGATTGGTGAGACAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGAAAGCACATTTCTTTATCCTCAAATTTTGTTAGAGATCAATTTAAATGTTGTGGATTGTTCTCCCTTTTGCTTCTCAAGCACTTGAGAATTTGGGTTGCTTCTGAAGTGCATGGAGTTTTGGACATCCAAGTGTAGTGAGTACAACTGCATATGCCTTCTGTTTTCTATTTGTTTGTTTGTTTGTTTAATGTCTGCTTCACTTGCTTGAACTTTCATTTAGTAAGCAGTTCAGAAAGTATATGATTGCTACCAGATCTTAGTGCAATATCAAACCATTTTATCAAAAGCTTTTTTAAATCCTTTCCTCTGTGGACTGGTGTAGAACTCAGAGACATCTGCTTTGAGCGAACTTAGGTTAGAATATTTGGTGGTTTCTCTACTTGCTGATTACGCTCGGGATCGAGAAAAACCCTAGTTGCGGGTTTCAGTTATTTTCTGGTTATGCCCTGTAATGAGTGAATCAGCATCCTCTTCAATGGTGCGAAGTAGCAAAGGTGCAATCGTTTGACATAAACATTGCTGACAGCAATGTTCTCGTTTACCATTCCTTCTTTGTTGTGCCTGTCAATGGCGTCGTTTGTGGATAATGGTTTGTTATAGTTAATTATTTATTTATTTATTTTATGATATATTGAACACAATTCTTGGATTCATAGGAAAAAATCATGGGACTTGAATGCAAATCTAATTGGTGTAATGAAGATTTTTATTGAATGGTGCCCTCCATGGATGCAATGAAAACAAGTTAAACTAGTTTTTGTGATGTTTCGATTCTTTAATTAAAACGAAGCGGTGTGATGGCCCTTTCAATCAAGGTACGTGAATCAAGGTACGTGCAACGACTAAACGATACTCTCCTAGCGTGAACATCCATGTCCTGAGTTGAAGTGACAATTAGCACGCCCTATGAGTTCGGTCACAATTGCACTTTGATTGCAGTGGACTTGCGATTGTGAGACACTCACTTCCACCCACAATTGAGTTGAGCTTATTTGTTAATGCGTCGCCTACGGTCAAGCGACATATGCTCGAGCTTCTAGCCTCGGTTCAAGAAAGTTTCAAAAAACAGGGGCACGGTCAAGCGACATATACTCGAGCTTCTGGCCTTGGTTCAAGAAAGTTTCAAAAAACAGGGGCAGAGAGATTTCGAAGAGAGTTTTGAAAGCAAGATTTGAGAAATTGAAATTGGTGTTATATGGGAATGTAAGCAAAAGACAACAATGTCGAGTAGGGAGCATCATTTCCATGGATTTCAAGTGAGAGACACATAAGATCTTAGACCTACAACCATCGATGAATAATTAGATTTGTGAATAATAAGATTACCCTCTACATTTGCTAAGTGAAGAACTTTCTTGGTTGCTATCAAGTTGTGGAAGTGAAGCAAATATGCACTCCAAAATGATAATGTCGATGCTTTGGCTCAACTCACCCTAGAACACGAGATCAAACTCTCTTGTAGCGTCTCGTTTGAAATCCTCAAAATGAATTGGTGAAATGCATCTCAAATATGTGTCTATCCAGTTCTGAAAAAAGTTGAATATTTTGTAGAAGAAGAATTAAAATCTTACACTATATTTAAATACGCTTTTCTATTACGGTGCTCGTTGTCACATAATCACTATCCAAACTTTTATACGCTCACATACAAATAATTTAAAATATATTGTAATCCACTCATTATTTTTGAAAATATTTTTGTGTTTGTTCTNCCTGGTGTCTCGGTTTTAGTTTCTTTAAGATTTGATTAGTTTCTCACTCTATAATTGTAATGCTACCACATACAGGCTTTGGTAGATGCTCCTGATATGGTCAGATCNCCACTATTTGTCTTGGAAGTGCCCTCATCAGTATAGATGCTCATTTCTCTGGAATTTAATGAAATAACCACCTCTTAGCTTCTTCAAACTCTTCTATTTGAAGTGATACTNAACAATTTCACAAAGCACCATGGGGGGCTGAATCGTAATTTTAAAGTTATGAACAGAACAGTCGGGTTTTCTCATCCAGAGTCTTATTTGGATCTACATGGGAAGAACAAACCCTAATTGCGACATCGTATAATCTTCTCTCATCGCCTTGCCCATCTGTGGAAACCCTAGCAGTACGAAGATGGTAAGCATTCCCGTCCTTAGTTTCTTTCCGTCGAACTATAAAGNACGCACCTCACCTTTCATGTTCTTTGTTTGCTTTAACCTGTTGTTTTGATCATGTCAGACGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGGTCAGTGATGTTGTGATGCAATCTGTAGTTTGTACTTCCTCTTGTTTGTTTTTGACCTTTTTTTATGCATTTGATACATGAAAGAGTTTGAAATAAGTTTTGTTTTATTAATCATTGACACATGAAGTGTTCTATTGTTTCTGTTGTGTATTGGCTGGATGACAACTCAATGCTTATGGATCAACATTATTATTTACTCTCTTTTTGCAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGAAAGTGTATTTCTCTAGCGTCAAATTTTGTTACTAGTTGAAGTTATCAGTTTTGGATTTTGTTCAATTCTGTTTCTCAAGCCTCAGGAGTTCGGGGCTGTTCGGGGTTGTTTTGAGGTTTATGGAATTCTGGACATCTAGTGTAGCGAGTTTTTACTTGATTTCTTCACAAGATGCCTACATCACTCCAATTAAGCAAGCATGTATCTGAATCTGCTGAGTGCTGATGTTTTTCTACTCAACTGTTAAAATCGGGTTTCTGTGGCTATGGATATGGTTTTCGATTTCTATTTGCTTTTCTGAATTTTATGTCTGGATTCCCTTGAGTGTCCCATTCATTGATGAAATATTAGATACTGCAGTTGTGCTACAAATTAAGATGATTTCAAGCATGGTTTCATGACTAAGCCTGCTTCATCTGCTTTAGCTCTTACTTATACCCTGTGTTAGAAATATATCGTTGCTAACCAATTCATAGTGCAGTACCAAACACTTCTATCTTCATTCTTCACTTTTATCAGAAGCTTTTCTATATCCTGATCGCTCTGGGCGGGTAGGACAAAACGCCACGAGATTTGAGCAAACTCCACTTAAAAAACTTGATGGGTTTCTCTTCTTCCTCAACCTTGGGATCAAGTAGTCCCAAAGGTGTTTACCTCTGATGTTAATGTTGCCTCCCAAATATGGCTATCAAGGGTATCTTCTGGGAATGGTGATTTTTCAGATATCCTTTCCTCGTGTAAATCGCTCCATGTGGGGCTCGTGGTAGTAGAATAAGAACCAAACCATGGAGTTCTGAATGTTGCATATGAAAAGTTGGGTGAAAAGCTCGGCGAAAAGCCAGGCGACGGTGTTGACGACGACAATGAAGGTAATAAACTACTTCCAAATACTTGAATTTCTCTGGTTATTTTCAAAGCTTGCAGACGTGATTCTTTTAAAGTCTGCCCTCTACTGCATGATTTCACCCCAGTTGAACCTATCATATCATTAGAAAAGCCTTTACTCTTGTATAATATGTGCATCTCTGATTTGAACAAAGTAATTTTACCCCCTTTCATCTATATGTTTAAAGGTTCCAAGTTCTTAGATGATATATGAATCACTCTTGAANAAAGCCTTTACTCTTGTATAATATGTGCATCTCTGATTTGAATACAGTAATTGTACTCCCTTTCATCCATATGTTTAAAGGTTCCAAGTTCTTAGATGATATATGAATCACTCTTGAATATTCAGCAGCTAACTTTTCTGTAGAATTGTTTCCACTGCTTCCACTCAATGCTATGCAAATACATGATGAAATTTACATGCTTATTGTGAAGGACGTCGAAGATTCTCGAATAATCGTAGACATCAAACGATGCCTCGGCTATTGTTGTCATTGTTTTTTAGCATATCAGGGCAGGGTTACATTGACAAGGACGTGATTTCTATACATGTAAAGTCCATTATATCTAGACTGAATAAAGAAATT

mRNA sequence

AAGGAACCAATTATCTGGACCCAGAACAGAGGAAAGAACCCTAGGCTCGTCGCCCGTCTCTGTAAAACCCTACAGCCGGAAGATGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGGAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAAAGCTTTTCTATATCCTGATCGCTCTGGGCGGTTGGGTGAAAAGCTCGGCGAAAAGCCAGGCGACGGTGTTGACGACGACAATGAAGGGCAGGGTTACATTGACAAGGACGTGATTTCTATACATGTAAAGTCCATTATATCTAGACTGAATAAAGAAATT

Coding sequence (CDS)

ATGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGGAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAAAGCTTTTCTATATCCTGATCGCTCTGGGCGGTTGGGTGAAAAGCTCGGCGAAAAGCCAGGCGACGGTGTTGACGACGACAATGAAGGGCAGGGTTACATTGACAAGGACGTGATTTCTATACATGTAAAGTCCATTATATCTAGACTGAATAAAGAAATT

Protein sequence

MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKKAFLYPDRSGRLGEKLGEKPGDGVDDDNEGQGYIDKDVISIHVKSIISRLNKEI
BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42
Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNR +  A     +  QMNFKRLSLTDI
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPD--MERIQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
            IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIKK
Sbjct: 61  VIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 117

BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-41
Identity = 86/119 (72.27%), Postives = 104/119 (87.39%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ R +  A     + S +NFKRLSLTD+
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPD--MERSPINFKRLSLTDL 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RA+LNDFDRFK+MLAKIK+
Sbjct: 61  KIDIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-41
Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNR +  A     +  QMN KRLSLTDI
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPD--MERIQMNLKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
            IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIK+
Sbjct: 61  VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21
Identity = 56/120 (46.67%), Postives = 82/120 (68.33%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           M F R+VE GRVALV+YGE   KLVVIVD++DQNR++  + ++      +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           K+ DI R     E+     AA V + +  S WG+KL  +++RA+L+DF RFK+M+A++KK
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.3e-20
Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNR +            MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAK 117
           K       +   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAK 116

BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: A0A0A0L4D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.4e-48
Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNR +  A       SQMNFKRLSLTDI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMV--RSQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: A0A0A0L725_CUCSA (Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-47
Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNR +  A       SQMNFKRLSLTDI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMV--RSQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNR +  A     + SQMNFKRLSLTDI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDI 65

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVP+KKELIEAMKA DVQKKWE+SSWGRKL+VKKRRASLNDFDRFKLMLAKIK+
Sbjct: 66  KIDIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKR 122

BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: A0A0A0LIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNR +  A     + SQMNFKRLSLTDI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVP+KKELIEAMKA DVQKKWE+SSWGRKL+VKKRRASLNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: M5XHS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-44
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDV+DQNR +  A       SQMNFKRLSLTDI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVLDQNRALVDAPDMV--RSQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVP+KKEL+ AM+AADV+KKWE+SSWGRKL+V+KRRA+LNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPKKKELLAAMEAADVKKKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. TAIR10
Match: AT4G27090.1 (AT4G27090.1 Ribosomal protein L14)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43
Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNR +  A     +  QMNFKRLSLTDI
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPD--MERIQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
            IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIKK
Sbjct: 61  VIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKK 117

BLAST of Cp4.1LG08g03320 vs. TAIR10
Match: AT2G20450.1 (AT2G20450.1 Ribosomal protein L14)

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-42
Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNR +  A     +  QMN KRLSLTDI
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPD--MERIQMNLKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
            IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIK+
Sbjct: 61  VIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|449432536|ref|XP_004134055.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNR +  A       SQMNFKRLSLTDI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMV--RSQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|659076099|ref|XP_008438500.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47
Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNR +  A       SQMNFKRLSLTDI
Sbjct: 68  MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMV--RSQMNFKRLSLTDI 127

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+
Sbjct: 128 KIDIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKR 184

BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|449432538|ref|XP_004134056.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47
Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNR +  A       SQMNFKRLSLTDI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMV--RSQMNFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|659076103|ref|XP_008438503.1| (PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47
Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNR +  A       SQ+NFKRLSLTDI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMV--RSQINFKRLSLTDI 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIK+
Sbjct: 61  KIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKR 117

BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|5762251|dbj|BAA83469.1| (Csf-1 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 5.1e-47
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNR +  A     + SQMNFKRLSLTDI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDI 65

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKK 120
           KIDIKRVP+KKELIEAMKA DVQKKWE+SSWGRKL+VKKRRASLNDFDRFKLMLAKIK+
Sbjct: 66  KIDIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKR 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RL142_ARATH2.2e-4276.4760S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1[more]
RL14_PEA1.4e-4172.27Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1[more]
RL141_ARATH2.5e-4174.7960S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1[more]
RL14_GRIJA4.8e-2146.6760S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1[more]
RL14_LUMRU5.3e-2045.6960S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L4D3_CUCSA9.4e-4888.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1[more]
A0A0A0L725_CUCSA2.7e-4787.39Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1[more]
Q9SXL9_CUCSA3.6e-4784.87Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1[more]
A0A0A0LIH9_CUCSA3.6e-4784.87Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1[more]
M5XHS7_PRUPE1.7e-4481.51Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G27090.11.3e-4376.47 Ribosomal protein L14[more]
AT2G20450.11.4e-4274.79 Ribosomal protein L14[more]
Match NameE-valueIdentityDescription
gi|449432536|ref|XP_004134055.1|1.3e-4788.24PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus][more]
gi|659076099|ref|XP_008438500.1|3.9e-4787.39PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo][more]
gi|449432538|ref|XP_004134056.1|3.9e-4787.39PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus][more]
gi|659076103|ref|XP_008438503.1|3.9e-4787.39PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo][more]
gi|5762251|dbj|BAA83469.1|5.1e-4784.87Csf-1 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR008991Translation_prot_SH3-like_sf
IPR002784Ribosomal_L14e_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0007018 microtubule-based movement
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005871 kinesin complex
cellular_component GO:0009524 phragmoplast
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005524 ATP binding
molecular_function GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g03320.1Cp4.1LG08g03320.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 49..119
score: 5.1
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 5..95
score: 2.68
IPR014722Ribosomal protein L2 domain 2GENE3DG3DSA:2.30.30.30coord: 4..87
score: 9.4
NoneNo IPR availablePANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 118..192
score: 5.2E-72coord: 2..82
score: 5.2
NoneNo IPR availablePANTHERPTHR11127:SF3SUBFAMILY NOT NAMEDcoord: 118..192
score: 5.2E-72coord: 2..82
score: 5.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g03320Cp4.1LG00g05070Cucurbita pepo (Zucchini)cpecpeB017
Cp4.1LG08g03320Cp4.1LG17g02270Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g03320Cp4.1LG03g09770Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g03320Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g03320Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG08g03320Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG08g03320Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g03320Cucumber (Gy14) v1cgycpeB1012
Cp4.1LG08g03320Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g03320Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g03320Cucurbita maxima (Rimu)cmacpeB554
Cp4.1LG08g03320Cucurbita maxima (Rimu)cmacpeB650
Cp4.1LG08g03320Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g03320Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g03320Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g03320Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g03320Cucurbita moschata (Rifu)cmocpeB507
Cp4.1LG08g03320Cucurbita moschata (Rifu)cmocpeB599
Cp4.1LG08g03320Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g03320Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g03320Wild cucumber (PI 183967)cpecpiB851
Cp4.1LG08g03320Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g03320Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g03320Cucumber (Chinese Long) v2cpecuB849
Cp4.1LG08g03320Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g03320Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g03320Bottle gourd (USVL1VR-Ls)cpelsiB716
Cp4.1LG08g03320Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g03320Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g03320Watermelon (Charleston Gray)cpewcgB792
Cp4.1LG08g03320Watermelon (97103) v1cpewmB841
Cp4.1LG08g03320Watermelon (97103) v1cpewmB845
Cp4.1LG08g03320Watermelon (97103) v1cpewmB853
Cp4.1LG08g03320Melon (DHL92) v3.5.1cpemeB803
Cp4.1LG08g03320Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g03320Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g03320Silver-seed gourdcarcpeB1101
Cp4.1LG08g03320Wax gourdcpewgoB1118