Cp4.1LG08g03320 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGGAACCAATTATCTGGACCCAGAACAGAGGAAAGAACCCTAGGCTCGTCGCCCGTCTCTGTAAAACCCTACAGCCGGAAGATGGTGAGGCTTCTCTTCCTTCGTATTTCTTCTCCTAACTACGAATCGACAGCGCATGGTGGTGGTGTTTTCTTCCTGAGTTTATGTTCTGCGGATTGTTTATGAATTTCGTGTTTTCTGAATTGTTTCTGTAGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGGAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTATTACTTTTTAGTTTGAATTTGTATCAATCCCCTTGACATTCATAAGCCACGGAAAACGGTAGCGCTATGCTTCCCCTCTCCTTTGTTTCTTCTGAATTTGATGTTTGCGTTATGATCTAAACATATTAATATCATAAAATTCTGCTATTTATTATCTAGGAAAATTATTTCATAGCTTTTTCAAGTTTGAAGTGATAATTGTTGAAATAATATACAGCATTCCTTATTTAACTTTATGTTCATTTAGTAGGTCGCTAATTAGTGGTCATTGAATCAGTAGTTGGGTTGAGGATGATGCAAATTACTACTGATTGATGGTTAGCTTGAACTGTTTTCTCTGGCTGATTCTCCAGAAACCAAAAGGGGTGTTTTGTTGGTTGTTCAAATTTATGGTTGTTTGATGCGCTGATGATTTTAATTGTTTTTGGGACTTCTCGTGAGTCTACAAATACAGATGTATGTCGTACTGGATGTTTGTAAACATTCATGCTTGTTTCAATGGATATGTTCCATTTTTTCTTTCCCTACTGAATTTGATTCTACAGTACCCAATTGTCTTTTGTAGAAAAGAAAGGATTTGGATGGATTTGGCATATGCATGCATTTTATGTTGTTATTTCCTGGTGACTTGGGTTTAGTTTTTTCAATATTTGACTAGTTGCTAACAACACGAGCATAGCTCAACTATTAAGTCGTTTTTACTTCCTCTGAGAGGTTGTAAGTTCGAATCCCTTCCTCCATGTGATATAACACTCGATTTTTTTATTTTATTAGTTGTTCATGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTTACTCCATTGGTATGAGGCCTTTTGGGGAAACCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATGGTATCAGAGCCATGCTCTAAACTTAGTCGTACCAATAGATTGGTAAATCCTCATATATCGAACAAAGAACTCCAAAAGAAAAAGGAGTCAAGCCTCCTCGAAGGCAGTCAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGGAGGCGCACTTTGTTCGAGGGGAGGTGTTGGATGATGGAAGTCCCACAACGACTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTTACTCCATTGGTATTAGGCCTTTTGGGGAAACCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAGTTCATTCTATGTATTTTTTTTAATGCTACTGTGTACAGGCTCTGGTGGATGCTCCTGATATGGTCAGGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGGTATGCTTTTCAACTGATTTCACTTTCAAATACTTAATTCTTCTACTACCACCCTCAATTGGGGTGTTGTTTTTGTTTGCCTCAAGTCTAACCCATTGTTTCGGTCATGTCAGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGGTCAGTGATGATATGTGACGCGTCTGTACTTTCTCTTGTTCCCCCCACCCTCTTTCTTTAGCATCGACAAGTATAAGAGCTCTAAACCCGCTGTTTCTCTCGTGTTCTTGATTCATGGCAACCTATTTCTCAAATGGATATTATTTATATTTTTGCAGAGAGCTGGATTGGTGAGACAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGAAAGCACATTTCTTTATCCTCAAATTTTGTTAGAGATCAATTTAAATGTTGTGGATTGTTCTCCCTTTTGCTTCTCAAGCACTTGAGAATTTGGGTTGCTTCTGAAGTGCATGGAGTTTTGGACATCCAAGTGTAGTGAGTACAACTGCATATGCCTTCTGTTTTCTATTTGTTTGTTTGTTTGTTTAATGTCTGCTTCACTTGCTTGAACTTTCATTTAGTAAGCAGTTCAGAAAGTATATGATTGCTACCAGATCTTAGTGCAATATCAAACCATTTTATCAAAAGCTTTTTTAAATCCTTTCCTCTGTGGACTGGTGTAGAACTCAGAGACATCTGCTTTGAGCGAACTTAGGTTAGAATATTTGGTGGTTTCTCTACTTGCTGATTACGCTCGGGATCGAGAAAAACCCTAGTTGCGGGTTTCAGTTATTTTCTGGTTATGCCCTGTAATGAGTGAATCAGCATCCTCTTCAATGGTGCGAAGTAGCAAAGGTGCAATCGTTTGACATAAACATTGCTGACAGCAATGTTCTCGTTTACCATTCCTTCTTTGTTGTGCCTGTCAATGGCGTCGTTTGTGGATAATGGTTTGTTATAGTTAATTATTTATTTATTTATTTTATGATATATTGAACACAATTCTTGGATTCATAGGAAAAAATCATGGGACTTGAATGCAAATCTAATTGGTGTAATGAAGATTTTTATTGAATGGTGCCCTCCATGGATGCAATGAAAACAAGTTAAACTAGTTTTTGTGATGTTTCGATTCTTTAATTAAAACGAAGCGGTGTGATGGCCCTTTCAATCAAGGTACGTGAATCAAGGTACGTGCAACGACTAAACGATACTCTCCTAGCGTGAACATCCATGTCCTGAGTTGAAGTGACAATTAGCACGCCCTATGAGTTCGGTCACAATTGCACTTTGATTGCAGTGGACTTGCGATTGTGAGACACTCACTTCCACCCACAATTGAGTTGAGCTTATTTGTTAATGCGTCGCCTACGGTCAAGCGACATATGCTCGAGCTTCTAGCCTCGGTTCAAGAAAGTTTCAAAAAACAGGGGCACGGTCAAGCGACATATACTCGAGCTTCTGGCCTTGGTTCAAGAAAGTTTCAAAAAACAGGGGCAGAGAGATTTCGAAGAGAGTTTTGAAAGCAAGATTTGAGAAATTGAAATTGGTGTTATATGGGAATGTAAGCAAAAGACAACAATGTCGAGTAGGGAGCATCATTTCCATGGATTTCAAGTGAGAGACACATAAGATCTTAGACCTACAACCATCGATGAATAATTAGATTTGTGAATAATAAGATTACCCTCTACATTTGCTAAGTGAAGAACTTTCTTGGTTGCTATCAAGTTGTGGAAGTGAAGCAAATATGCACTCCAAAATGATAATGTCGATGCTTTGGCTCAACTCACCCTAGAACACGAGATCAAACTCTCTTGTAGCGTCTCGTTTGAAATCCTCAAAATGAATTGGTGAAATGCATCTCAAATATGTGTCTATCCAGTTCTGAAAAAAGTTGAATATTTTGTAGAAGAAGAATTAAAATCTTACACTATATTTAAATACGCTTTTCTATTACGGTGCTCGTTGTCACATAATCACTATCCAAACTTTTATACGCTCACATACAAATAATTTAAAATATATTGTAATCCACTCATTATTTTTGAAAATATTTTTGTGTTTGTTCTNCCTGGTGTCTCGGTTTTAGTTTCTTTAAGATTTGATTAGTTTCTCACTCTATAATTGTAATGCTACCACATACAGGCTTTGGTAGATGCTCCTGATATGGTCAGATCNCCACTATTTGTCTTGGAAGTGCCCTCATCAGTATAGATGCTCATTTCTCTGGAATTTAATGAAATAACCACCTCTTAGCTTCTTCAAACTCTTCTATTTGAAGTGATACTNAACAATTTCACAAAGCACCATGGGGGGCTGAATCGTAATTTTAAAGTTATGAACAGAACAGTCGGGTTTTCTCATCCAGAGTCTTATTTGGATCTACATGGGAAGAACAAACCCTAATTGCGACATCGTATAATCTTCTCTCATCGCCTTGCCCATCTGTGGAAACCCTAGCAGTACGAAGATGGTAAGCATTCCCGTCCTTAGTTTCTTTCCGTCGAACTATAAAGNACGCACCTCACCTTTCATGTTCTTTGTTTGCTTTAACCTGTTGTTTTGATCATGTCAGACGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGGTCAGTGATGTTGTGATGCAATCTGTAGTTTGTACTTCCTCTTGTTTGTTTTTGACCTTTTTTTATGCATTTGATACATGAAAGAGTTTGAAATAAGTTTTGTTTTATTAATCATTGACACATGAAGTGTTCTATTGTTTCTGTTGTGTATTGGCTGGATGACAACTCAATGCTTATGGATCAACATTATTATTTACTCTCTTTTTGCAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAGTGAATCTTAGAAAGTGTATTTCTCTAGCGTCAAATTTTGTTACTAGTTGAAGTTATCAGTTTTGGATTTTGTTCAATTCTGTTTCTCAAGCCTCAGGAGTTCGGGGCTGTTCGGGGTTGTTTTGAGGTTTATGGAATTCTGGACATCTAGTGTAGCGAGTTTTTACTTGATTTCTTCACAAGATGCCTACATCACTCCAATTAAGCAAGCATGTATCTGAATCTGCTGAGTGCTGATGTTTTTCTACTCAACTGTTAAAATCGGGTTTCTGTGGCTATGGATATGGTTTTCGATTTCTATTTGCTTTTCTGAATTTTATGTCTGGATTCCCTTGAGTGTCCCATTCATTGATGAAATATTAGATACTGCAGTTGTGCTACAAATTAAGATGATTTCAAGCATGGTTTCATGACTAAGCCTGCTTCATCTGCTTTAGCTCTTACTTATACCCTGTGTTAGAAATATATCGTTGCTAACCAATTCATAGTGCAGTACCAAACACTTCTATCTTCATTCTTCACTTTTATCAGAAGCTTTTCTATATCCTGATCGCTCTGGGCGGGTAGGACAAAACGCCACGAGATTTGAGCAAACTCCACTTAAAAAACTTGATGGGTTTCTCTTCTTCCTCAACCTTGGGATCAAGTAGTCCCAAAGGTGTTTACCTCTGATGTTAATGTTGCCTCCCAAATATGGCTATCAAGGGTATCTTCTGGGAATGGTGATTTTTCAGATATCCTTTCCTCGTGTAAATCGCTCCATGTGGGGCTCGTGGTAGTAGAATAAGAACCAAACCATGGAGTTCTGAATGTTGCATATGAAAAGTTGGGTGAAAAGCTCGGCGAAAAGCCAGGCGACGGTGTTGACGACGACAATGAAGGTAATAAACTACTTCCAAATACTTGAATTTCTCTGGTTATTTTCAAAGCTTGCAGACGTGATTCTTTTAAAGTCTGCCCTCTACTGCATGATTTCACCCCAGTTGAACCTATCATATCATTAGAAAAGCCTTTACTCTTGTATAATATGTGCATCTCTGATTTGAACAAAGTAATTTTACCCCCTTTCATCTATATGTTTAAAGGTTCCAAGTTCTTAGATGATATATGAATCACTCTTGAANAAAGCCTTTACTCTTGTATAATATGTGCATCTCTGATTTGAATACAGTAATTGTACTCCCTTTCATCCATATGTTTAAAGGTTCCAAGTTCTTAGATGATATATGAATCACTCTTGAATATTCAGCAGCTAACTTTTCTGTAGAATTGTTTCCACTGCTTCCACTCAATGCTATGCAAATACATGATGAAATTTACATGCTTATTGTGAAGGACGTCGAAGATTCTCGAATAATCGTAGACATCAAACGATGCCTCGGCTATTGTTGTCATTGTTTTTTAGCATATCAGGGCAGGGTTACATTGACAAGGACGTGATTTCTATACATGTAAAGTCCATTATATCTAGACTGAATAAAGAAATT AAGGAACCAATTATCTGGACCCAGAACAGAGGAAAGAACCCTAGGCTCGTCGCCCGTCTCTGTAAAACCCTACAGCCGGAAGATGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGGAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAAAGCTTTTCTATATCCTGATCGCTCTGGGCGGTTGGGTGAAAAGCTCGGCGAAAAGCCAGGCGACGGTGTTGACGACGACAATGAAGGGCAGGGTTACATTGACAAGGACGTGATTTCTATACATGTAAAGTCCATTATATCTAGACTGAATAAAGAAATT ATGCCGTTCAAGAGGTATGTTGAGATCGGGAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGGAAGCTTGTTGTGATTGTCGATGTCATTGACCAGAACAGAGTAATTTTCTCTGCTGTTACTTACTTTTTCGATGAGTCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAGCTCATTGAAGCCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGCGAAAACTTCTCGTTAAAAAACGAAGGGCATCCCTTAACGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGCTGAAAAAGAAAGCTTTTCTATATCCTGATCGCTCTGGGCGGTTGGGTGAAAAGCTCGGCGAAAAGCCAGGCGACGGTGTTGACGACGACAATGAAGGGCAGGGTTACATTGACAAGGACGTGATTTCTATACATGTAAAGTCCATTATATCTAGACTGAATAAAGAAATT MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRVIFSAVTYFFDESQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKKAFLYPDRSGRLGEKLGEKPGDGVDDDNEGQGYIDKDVISIHVKSIISRLNKEI
BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42 Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-41 Identity = 86/119 (72.27%), Postives = 104/119 (87.39%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.5e-41 Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21 Identity = 56/120 (46.67%), Postives = 82/120 (68.33%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.3e-20 Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: A0A0A0L4D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 9.4e-48 Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: A0A0A0L725_CUCSA (Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.7e-47 Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47 Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: A0A0A0LIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47 Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TrEMBL
Match: M5XHS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.7e-44 Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TAIR10
Match: AT4G27090.1 (AT4G27090.1 Ribosomal protein L14) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43 Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. TAIR10
Match: AT2G20450.1 (AT2G20450.1 Ribosomal protein L14) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-42 Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|449432536|ref|XP_004134055.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus]) HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47 Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|659076099|ref|XP_008438500.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo]) HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47 Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|449432538|ref|XP_004134056.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47 Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|659076103|ref|XP_008438503.1| (PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo]) HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47 Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of Cp4.1LG08g03320 vs. NCBI nr
Match: gi|5762251|dbj|BAA83469.1| (Csf-1 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 5.1e-47 Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |