Cp4.1LG08g02990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g02990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPHD finger protein ING
LocationCp4.1LG08 : 2314474 .. 2316850 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTAAATGCAGGGCTAGTGAAACAGAATGAGCAACGATGTGAGCAAGAAATTGAGGATATTAAGCGGGGAGTTAAATGTGGAAACATTACTCCTGATACTTCACTCATCCGATTCTCTGATGAAGCTCTTGATGAGCAGAAGCATAGCATTAGAATTGCCGATGAAAAGGTTGCCCTTGCCGTTCAGGCATATGATTTGGTATGTGGAAGTTCAATGAAACTTGTTTAAGTTGCGTTTGCTTTTCCATGATGTCGATTGAGTGTGACTTTGAACTCAGGCACTCTCCGCTTCATGATAATGATTCGACACTAATTTTCTGCTCAATTCAAGTTAATATAAGAAAAAGAGATAAATTAGACCACATTTGATAACCACTTGGTTTTTTTTTTTTTTTAAATATGCTTGTTTCTCCCAATTTTTCTTCAATGAGTTCCATCATTCTTAAGAAAACATTTGAATTCTTAGCTAAATTTAAAAAACAAAAACAAAAACAAAATTTTGAAACTACTTTCTATAGTTTTAAAAATTTAGCTTGGTTTTAAGGGAATTCATAGGTGAAAGTAGTATTTATAGGCTTCATTTTGATAAACTAAATGGTTATCAAATGGAGGCTTACCATTTTTACAAAATGTATTTAATCGATATACCGAGGTCTTTTTAGTGTTTGCAGTTTTGCACTCGTGCACTTGTCTCCTCTAACCTCTTGTTTGGAAAGAACCACTGTGAAAGAAACTTCATGTTTAAACTTGTCACCTACTCGTACATGCCCTAGAGTGAGGAGGTATGAGGGAGTCTCCCAGATTTCTCTTAAGGTCTCCACTTTCATCTCAATGCCTGACACAGAAACTAGTGCCTCATCCTTTACCACCAGTGTCAGATCTTGATATTTGACATAGAAACTAGTACCTTATCCTTGACCACCACGATCATACCTTCGACAAACCTCTTTTCTTTTTTATGCTATGTCGTCTACAACTATGGATGTTTTTTTGTGTGTTTTCTTTTGTTATTTGGCTGGGAAAAGAAAGGCCATCTTCTTATTGTTTATATTCTTATCTACACTCTTCATTTATATTGTGCTTCAGGTAGACACTCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCATGGTAGTGCATGCGATTCCACCTTTGATATCCTCTATGCTCCAGTGAATATGGAGCATAAATACATTTATCTTTTTCATTTTGGATCCAACTCCCATCTTTTATATCATGGTTATTTGCAGAAAGGGGGAGTGCTGCTGCAAGTGGGTTACCAGCTTCTAGTATGGATGGTGGTACAAAATCTGGACGGGGAACAGAAGGTGGTAGAGGAGGGCGTAAAAAGTAAGATCATCTCCTACATGATTAATGTTGAAATTATCTACTGATATAAGACACCATTTACTTTAGGTTACATAATTACATTACTGTTTATGATGAATTGGGAATAGTAGTATATACTACAAAGACATTTATTTTATGCATGTTGGGCAAGAGTTATAGGACATCATCTGTGACGAAAATTATTTTGTACAGAACCCGGCATGGCCAGACTGCGGCTGCAGCTGCTGCAACAGAAGCATCAACTGCTGCAACTCCCACAGGAATGGAACTCGAATTACCGGTTGATCCAAACGAACCAACTTACTGCCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAACCCTAATGTATGTGACAACCCTTTCCCCCTCTACTTACATTTCTTTTTTTTTTTTGTGGTTTGAGTCTATAATCTAAGCCAGTCTTCCCATTCATACAGTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCGAAAGGAAAATGGTACTGTTCAGATTGCGCGGGCTCGAAAGGTCGCCGAAAAGGAAGATAATACAGGTATCAGATCAACAGTGTGCTGCCTTATTTTATATGAAATACATTAAAGTCAAATGTAACTGCAGAATATCCTGCTCAGCTAGTCCATAAATTACTTGCAATTCCAATCCTTGTAAATACTGTTTTTGCTTTAATGCTGGTTTTTTAGTGGCTACAAAAGTTTTGAAATTGTAGAATCTATGGCAGTAACTCCAAATCGTTTGAGGCCCCTTCTCATCCTGGGAAGTTGATCAAGTTTCTTCAAGAAAGTGTCAACTCATGAGGATTTGAAGTGGGCCTTAAAACCATTTGAAGATACAGAAAATATGACACTGTTTTTCATTGTAAAACACACTGATTTGATTTGCTGCATGGTTGGGGATAAAAACAGAGATGCTTAGGCGTCTTTGGATGTTTGTTAAGAGGAGACATGAAGTGTCAAATTTTGACACTTTTGT

mRNA sequence

ATGTTTGTAAATGCAGGGCTAGTGAAACAGAATGAGCAACGATGTGAGCAAGAAATTGAGGATATTAAGCGGGGAGTTAAATGTGGAAACATTACTCCTGATACTTCACTCATCCGATTCTCTGATGAAGCTCTTGATGAGCAGAAGCATAGCATTAGAATTGCCGATGAAAAGGTTGCCCTTGCCGTTCAGGCATATGATTTGGTAGACACTCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCATGAAAGGGGGAGTGCTGCTGCAAGTGGGTTACCAGCTTCTAGTATGGATGGTGGTACAAAATCTGGACGGGGAACAGAAGGTGGTAGAGGAGGGCGTAAAAAAACCCGGCATGGCCAGACTGCGGCTGCAGCTGCTGCAACAGAAGCATCAACTGCTGCAACTCCCACAGGAATGGAACTCGAATTACCGGTTGATCCAAACGAACCAACTTACTGCCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAACCCTAATGTATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCGAAAGGAAAATGGTACTGTTCAGATTGCGCGGGCTCGAAAGGTCGCCGAAAAGGAAGATAATACAGGTATCAGATCAACAGTGTGCTGCCTTATTTTATATGAAATACATTAAAGTCAAATGTAACTGCAGAATATCCTGCTCAGCTAGTCCATAAATTACTTGCAATTCCAATCCTTGTAAATACTGTTTTTGCTTTAATGCTGGTTTTTTAGTGGCTACAAAAGTTTTGAAATTGTAGAATCTATGGCAGTAACTCCAAATCGTTTGAGGCCCCTTCTCATCCTGGGAAGTTGATCAAGTTTCTTCAAGAAAGTGTCAACTCATGAGGATTTGAAGTGGGCCTTAAAACCATTTGAAGATACAGAAAATATGACACTGTTTTTCATTGTAAAACACACTGATTTGATTTGCTGCATGGTTGGGGATAAAAACAGAGATGCTTAGGCGTCTTTGGATGTTTGTTAAGAGGAGACATGAAGTGTCAAATTTTGACACTTTTGT

Coding sequence (CDS)

ATGTTTGTAAATGCAGGGCTAGTGAAACAGAATGAGCAACGATGTGAGCAAGAAATTGAGGATATTAAGCGGGGAGTTAAATGTGGAAACATTACTCCTGATACTTCACTCATCCGATTCTCTGATGAAGCTCTTGATGAGCAGAAGCATAGCATTAGAATTGCCGATGAAAAGGTTGCCCTTGCCGTTCAGGCATATGATTTGGTAGACACTCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCATGAAAGGGGGAGTGCTGCTGCAAGTGGGTTACCAGCTTCTAGTATGGATGGTGGTACAAAATCTGGACGGGGAACAGAAGGTGGTAGAGGAGGGCGTAAAAAAACCCGGCATGGCCAGACTGCGGCTGCAGCTGCTGCAACAGAAGCATCAACTGCTGCAACTCCCACAGGAATGGAACTCGAATTACCGGTTGATCCAAACGAACCAACTTACTGCCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAACCCTAATGTATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAAAAGAACAACCGAAAGGAAAATGGTACTGTTCAGATTGCGCGGGCTCGAAAGGTCGCCGAAAAGGAAGATAATACAGGTATCAGATCAACAGTGTGCTGCCTTATTTTATATGAAATACATTAAAGTCAAATGTAACTGCAGAATATCCTGCTCAGCTAGTCCATAA

Protein sequence

MFVNAGLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPNVLQDRMVSFWLCWSKRTTERKMVLFRLRGLERSPKRKIIQVSDQQCAALFYMKYIKVKCNCRISCSASP
Homology
[Close]
BLAST of Cp4.1LG08g02990 vs. Swiss-Prot
Match: ING1_ARATH (PHD finger protein ING1 OS=Arabidopsis thaliana GN=ING1 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.0e-53
Identity = 110/168 (65.48%), Postives = 134/168 (79.76%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCE+EIEDI+RG + GNITP+TSL +FS+EALDEQKHS+RIADEKV LA+QAYDL
Sbjct: 37  RQNEQRCEKEIEDIRRG-RAGNITPNTSLTKFSEEALDEQKHSVRIADEKVTLAMQAYDL 96

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQ 128
           VD H+QQLDQY+K  DE +R E+ +AAA+      ++   K+G   EGGRGGRKKTR   
Sbjct: 97  VDMHVQQLDQYMKKSDEVIRKEKEAAAAT----LELENNGKAGNAGEGGRGGRKKTR--- 156

Query: 129 TAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDN 177
            A AA+   AST  T + M+L+LPVDPNEPTYC+CNQVS+GEMVACDN
Sbjct: 157 LATAASTAAASTGMTSSNMDLDLPVDPNEPTYCICNQVSFGEMVACDN 196

[Close]
BLAST of Cp4.1LG08g02990 vs. Swiss-Prot
Match: ING5_HUMAN (Inhibitor of growth protein 5 OS=Homo sapiens GN=ING5 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = 1 

Query: 55  ADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGT 114
           +D+KV LA+Q Y++VD HI++LD  L  F+  L+ +   +       SS   G K GRG 
Sbjct: 79  SDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFE----SSGGRGLKKGRGQ 138

Query: 115 EGGRGGR------------KKTRHGQTAAAAAATEASTAATPTGMELELPVDPNEPTYCL 174
           +  RG R            KK +H      +  T+   +  P+ + L++PVDPNEPTYCL
Sbjct: 139 KEKRGSRGRGRRTSEEDTPKKKKH---KGGSEFTDTILSVHPSDV-LDMPVDPNEPTYCL 198

Query: 175 CNQVSYGEMVACDNPN 179
           C+QVSYGEM+ CDNP+
Sbjct: 199 CHQVSYGEMIGCDNPD 206

[Close]
BLAST of Cp4.1LG08g02990 vs. Swiss-Prot
Match: ING5_MOUSE (Inhibitor of growth protein 5 OS=Mus musculus GN=Ing5 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-15
Identity = 52/132 (39.39%), Postives = 80/132 (60.61%), Query Frame = 1 

Query: 55  ADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGG-TKSGRG 114
           +D+KV LA+Q Y++VD HI++LD  L  F+  L+     +      A S+  G ++  + 
Sbjct: 79  SDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDRMDGSDFESTGARSLKKGRSQKEKR 138

Query: 115 TEGGRGGR-------KKTRHGQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQV 174
           +  GRG R       KK +H    + +  T++  +  P+ + L++PVDPNEPTYCLC+QV
Sbjct: 139 SSRGRGRRTSEEDTPKKKKH---KSGSEFTDSILSVHPSDV-LDMPVDPNEPTYCLCHQV 198

Query: 175 SYGEMVACDNPN 179
           SYGEM+ CDNP+
Sbjct: 199 SYGEMIGCDNPD 206

[Close]
BLAST of Cp4.1LG08g02990 vs. Swiss-Prot
Match: ING4_MOUSE (Inhibitor of growth protein 4 OS=Mus musculus GN=Ing4 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 8.3e-14
Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = 1 

Query: 36  SLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHER---- 95
           +L+R   EA  + K      D+KV LA+Q Y++VD HI++LD  L  F+  L+ ++    
Sbjct: 63  ALLRQIQEAYGKCKE---FGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESS 122

Query: 96  --GSAAASGLPASSMDGGTKSGRGTEGGRGG--------RKKTRHGQTAAAAAATEASTA 155
              S+++ G          K+ R    G+          +KK +  +T+        +  
Sbjct: 123 DYDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFG 182

Query: 156 ATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           +      L++PVDPNEPTYCLC+QVSYGEM+ CDNP+
Sbjct: 183 SVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPD 216

[Close]
BLAST of Cp4.1LG08g02990 vs. Swiss-Prot
Match: ING4_BOVIN (Inhibitor of growth protein 4 OS=Bos taurus GN=ING4 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 1 

Query: 36  SLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGSAA 95
           +L+R   EA  + K      D+KV LA+Q Y++VD HI++LD  L  F+  L+ ++    
Sbjct: 63  ALLRQIQEAYGKCKE---FGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQ--IE 122

Query: 96  ASGLPASSMDGGT-------KSGRGTEGGRGG--------RKKTRHGQTAAAAAATEAST 155
           +S   +SS  G         K+ R    G+          +KK +  +T+        + 
Sbjct: 123 SSDYDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTF 182

Query: 156 AATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPNVLQDR 184
            +      L++PVDPNEPTYCLC+QVSYGEM+ CDNP+   +R
Sbjct: 183 GSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIER 220

[Close]
BLAST of Cp4.1LG08g02990 vs. TrEMBL
Match: A0A0A0L831_CUCSA (PHD finger protein ING OS=Cucumis sativus GN=Csa_3G133330 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.7e-80
Identity = 160/173 (92.49%), Postives = 164/173 (94.80%), Query Frame = 1 

Query: 6   GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA 65
           GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA
Sbjct: 34  GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA 93

Query: 66  YDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTR 125
           YDLVDTHIQQLDQYLKNFDEKLRHERG+AAA+GLPASS+D  TKSGRGTEGGRGGRKK R
Sbjct: 94  YDLVDTHIQQLDQYLKNFDEKLRHERGTAAATGLPASSVDVNTKSGRGTEGGRGGRKK-R 153

Query: 126 HGQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           +GQ  AAAA TEA T A PTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN
Sbjct: 154 NGQ--AAAATTEAPTTANPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 203

[Close]
BLAST of Cp4.1LG08g02990 vs. TrEMBL
Match: A0A067DJ85_CITSI (PHD finger protein ING OS=Citrus sinensis GN=CISIN_1g025753mg PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-68
Identity = 138/178 (77.53%), Postives = 151/178 (84.83%), Query Frame = 1 

Query: 5   AGLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQ 64
           A + +QNEQRCEQEIED+ R ++ GNITP+TSLIRFSD+ALDEQKHSIRIADEKVALAVQ
Sbjct: 35  AEIQRQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSIRIADEKVALAVQ 94

Query: 65  AYDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKT 124
           AYDLVDTHIQQLDQYLKNFDE+LR ER S A +  PA S+DG TKSGR +EGGRGGRKKT
Sbjct: 95  AYDLVDTHIQQLDQYLKNFDEELRRERDSVATTASPAPSLDGSTKSGRSSEGGRGGRKKT 154

Query: 125 RHGQTAAAAAATEASTAAT----PTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           R    AAAAAA     AAT    PTGMEL+LPVDPNEPTYC+CNQVSYGEMVACDNPN
Sbjct: 155 RLATAAAAAAAAVTEAAATPVANPTGMELDLPVDPNEPTYCVCNQVSYGEMVACDNPN 212

[Close]
BLAST of Cp4.1LG08g02990 vs. TrEMBL
Match: A0A151U2T5_CAJCA (PHD finger protein ING (Fragment) OS=Cajanus cajan GN=KK1_006249 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 137/172 (79.65%), Postives = 149/172 (86.63%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCEQEIEDI+RGV+ GNITPDTS+IRFSDEALDEQKHSIR+ADEKVALAVQAYDL
Sbjct: 2   RQNEQRCEQEIEDIRRGVRSGNITPDTSVIRFSDEALDEQKHSIRVADEKVALAVQAYDL 61

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEG--GRGGRKKTRH 128
           VDTHIQQLDQYLK FDE++R ER +AA +G+PAS  DG TKSGRG E   GRGGRKKTR 
Sbjct: 62  VDTHIQQLDQYLKKFDEEIRRERENAAITGVPASGPDGNTKSGRGNESGTGRGGRKKTRQ 121

Query: 129 GQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
             T  AAAATEA T   PTGM+L+LPVDPNEPTYC CNQVSYG MVACDNPN
Sbjct: 122 -TTLVAAAATEAQTTTNPTGMDLDLPVDPNEPTYCFCNQVSYGAMVACDNPN 172

[Close]
BLAST of Cp4.1LG08g02990 vs. TrEMBL
Match: V4S0J5_9ROSI (PHD finger protein ING OS=Citrus clementina GN=CICLE_v10005726mg PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 9.1e-68
Identity = 137/174 (78.74%), Postives = 149/174 (85.63%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCEQEIED+ R ++ GNITP+TSLIRFSD+ALDEQKHSIRIADEKVALAVQAYDL
Sbjct: 37  RQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSIRIADEKVALAVQAYDL 96

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQ 128
           VDTHIQQLDQYLKNFDE+LR ER S A +  PA S+DG TKSGR +EGGRGGRKKTR   
Sbjct: 97  VDTHIQQLDQYLKNFDEELRRERDSVATTASPAPSLDGSTKSGRSSEGGRGGRKKTRLAT 156

Query: 129 TAAAAAATEASTAAT----PTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
            AAAAAA     AAT    PTGMEL+LPVDPNEPTYC+CNQVSYGEMVACDNPN
Sbjct: 157 AAAAAAAAVTEAAATPVANPTGMELDLPVDPNEPTYCVCNQVSYGEMVACDNPN 210

[Close]
BLAST of Cp4.1LG08g02990 vs. TrEMBL
Match: A0A067DVJ8_CITSI (PHD finger protein ING OS=Citrus sinensis GN=CISIN_1g025753mg PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 9.1e-68
Identity = 137/174 (78.74%), Postives = 149/174 (85.63%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCEQEIED+ R ++ GNITP+TSLIRFSD+ALDEQKHSIRIADEKVALAVQAYDL
Sbjct: 37  RQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSIRIADEKVALAVQAYDL 96

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQ 128
           VDTHIQQLDQYLKNFDE+LR ER S A +  PA S+DG TKSGR +EGGRGGRKKTR   
Sbjct: 97  VDTHIQQLDQYLKNFDEELRRERDSVATTASPAPSLDGSTKSGRSSEGGRGGRKKTRLAT 156

Query: 129 TAAAAAATEASTAAT----PTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
            AAAAAA     AAT    PTGMEL+LPVDPNEPTYC+CNQVSYGEMVACDNPN
Sbjct: 157 AAAAAAAAVTEAAATPVANPTGMELDLPVDPNEPTYCVCNQVSYGEMVACDNPN 210

[Close]
BLAST of Cp4.1LG08g02990 vs. TAIR10
Match: AT3G24010.1 (AT3G24010.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 208.8 bits (530), Expect = 3.9e-54
Identity = 110/168 (65.48%), Postives = 134/168 (79.76%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCE+EIEDI+RG + GNITP+TSL +FS+EALDEQKHS+RIADEKV LA+QAYDL
Sbjct: 37  RQNEQRCEKEIEDIRRG-RAGNITPNTSLTKFSEEALDEQKHSVRIADEKVTLAMQAYDL 96

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQ 128
           VD H+QQLDQY+K  DE +R E+ +AAA+      ++   K+G   EGGRGGRKKTR   
Sbjct: 97  VDMHVQQLDQYMKKSDEVIRKEKEAAAAT----LELENNGKAGNAGEGGRGGRKKTR--- 156

Query: 129 TAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDN 177
            A AA+   AST  T + M+L+LPVDPNEPTYC+CNQVS+GEMVACDN
Sbjct: 157 LATAASTAAASTGMTSSNMDLDLPVDPNEPTYCICNQVSFGEMVACDN 196

[Close]
BLAST of Cp4.1LG08g02990 vs. TAIR10
Match: AT1G54390.2 (AT1G54390.2 PHD finger protein-related)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 1 

Query: 29  GNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLR 88
           G +  + ++ +   E    Q++++ +  EKV LA QAYDL+D+H+++LD+ L NF E L+
Sbjct: 71  GGLDEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLK 130

Query: 89  HERG-----SAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQTAAAAAATEASTAAT 148
            E        +    LP        KS  GT   +    + R               +  
Sbjct: 131 QEGKIPPDEPSVLPPLPIVPKAEKRKSFYGTPQPKKIDYRDRDWDRDRDFELMPPPGSNR 190

Query: 149 PTGMELE-LPVDPNEPTYCLCNQVSYGEMVACDNPNV--LQDRMVSFWLCWS 193
              M +E  P+DPNEPTYC+C+QVS+G+M+ACDN NV  L   ++ ++L +S
Sbjct: 191 KDLMPIEEQPIDPNEPTYCVCHQVSFGDMIACDNENVSLLSQHLIIYFLMYS 242

[Close]
BLAST of Cp4.1LG08g02990 vs. NCBI nr
Match: gi|659075948|ref|XP_008438417.1| (PREDICTED: PHD finger protein ING1 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 1.0e-80
Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 1 

Query: 6   GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA 65
           GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA
Sbjct: 34  GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA 93

Query: 66  YDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTR 125
           YDLVDTHIQQLDQYLKNFDEKLRHERG+AAA+GLPASS+DG TKSGRGTEGGRGGRKK R
Sbjct: 94  YDLVDTHIQQLDQYLKNFDEKLRHERGTAAATGLPASSVDGNTKSGRGTEGGRGGRKK-R 153

Query: 126 HGQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           + Q  AAA+ TEA T ATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN
Sbjct: 154 NAQ--AAASTTEAPTTATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 203

[Close]
BLAST of Cp4.1LG08g02990 vs. NCBI nr
Match: gi|449432470|ref|XP_004134022.1| (PREDICTED: PHD finger protein ING1 isoform X1 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 3.9e-80
Identity = 160/173 (92.49%), Postives = 164/173 (94.80%), Query Frame = 1 

Query: 6   GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA 65
           GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA
Sbjct: 34  GLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQA 93

Query: 66  YDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTR 125
           YDLVDTHIQQLDQYLKNFDEKLRHERG+AAA+GLPASS+D  TKSGRGTEGGRGGRKK R
Sbjct: 94  YDLVDTHIQQLDQYLKNFDEKLRHERGTAAATGLPASSVDVNTKSGRGTEGGRGGRKK-R 153

Query: 126 HGQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           +GQ  AAAA TEA T A PTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN
Sbjct: 154 NGQ--AAAATTEAPTTANPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 203

[Close]
BLAST of Cp4.1LG08g02990 vs. NCBI nr
Match: gi|502122420|ref|XP_004497737.1| (PREDICTED: PHD finger protein ING1 [Cicer arietinum])

HSP 1 Score: 269.2 bits (687), Expect = 6.9e-69
Identity = 141/175 (80.57%), Postives = 155/175 (88.57%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCEQEIEDI+RGV+ GNITPDT +IRFSDEALDEQKHSIRIADEKVALAVQAYDL
Sbjct: 83  RQNEQRCEQEIEDIRRGVRSGNITPDTLVIRFSDEALDEQKHSIRIADEKVALAVQAYDL 142

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKTRHGQ 128
           VDTHIQQLDQYLK FDE+LR ER +AA +G+PAS  DG TKSG+G EGGRGGRKKTR  Q
Sbjct: 143 VDTHIQQLDQYLKKFDEELRRERENAAITGVPASIPDGNTKSGKGNEGGRGGRKKTRQTQ 202

Query: 129 TA----AAAAATEA-STAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           TA    AAAAA EA +T+A PTGM+L+LPVDPNEPTYC CNQVSYGEMVACDNP+
Sbjct: 203 TASVATAAAAAAEALATSANPTGMDLDLPVDPNEPTYCFCNQVSYGEMVACDNPD 257

[Close]
BLAST of Cp4.1LG08g02990 vs. NCBI nr
Match: gi|641823663|gb|KDO43053.1| (hypothetical protein CISIN_1g025753mg [Citrus sinensis])

HSP 1 Score: 266.5 bits (680), Expect = 4.5e-68
Identity = 138/178 (77.53%), Postives = 151/178 (84.83%), Query Frame = 1 

Query: 5   AGLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQ 64
           A + +QNEQRCEQEIED+ R ++ GNITP+TSLIRFSD+ALDEQKHSIRIADEKVALAVQ
Sbjct: 35  AEIQRQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSIRIADEKVALAVQ 94

Query: 65  AYDLVDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEGGRGGRKKT 124
           AYDLVDTHIQQLDQYLKNFDE+LR ER S A +  PA S+DG TKSGR +EGGRGGRKKT
Sbjct: 95  AYDLVDTHIQQLDQYLKNFDEELRRERDSVATTASPAPSLDGSTKSGRSSEGGRGGRKKT 154

Query: 125 RHGQTAAAAAATEASTAAT----PTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
           R    AAAAAA     AAT    PTGMEL+LPVDPNEPTYC+CNQVSYGEMVACDNPN
Sbjct: 155 RLATAAAAAAAAVTEAAATPVANPTGMELDLPVDPNEPTYCVCNQVSYGEMVACDNPN 212

[Close]
BLAST of Cp4.1LG08g02990 vs. NCBI nr
Match: gi|1012362422|gb|KYP73605.1| (Inhibitor of growth protein 5, partial [Cajanus cajan])

HSP 1 Score: 265.8 bits (678), Expect = 7.7e-68
Identity = 137/172 (79.65%), Postives = 149/172 (86.63%), Query Frame = 1 

Query: 9   KQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDL 68
           +QNEQRCEQEIEDI+RGV+ GNITPDTS+IRFSDEALDEQKHSIR+ADEKVALAVQAYDL
Sbjct: 2   RQNEQRCEQEIEDIRRGVRSGNITPDTSVIRFSDEALDEQKHSIRVADEKVALAVQAYDL 61

Query: 69  VDTHIQQLDQYLKNFDEKLRHERGSAAASGLPASSMDGGTKSGRGTEG--GRGGRKKTRH 128
           VDTHIQQLDQYLK FDE++R ER +AA +G+PAS  DG TKSGRG E   GRGGRKKTR 
Sbjct: 62  VDTHIQQLDQYLKKFDEEIRRERENAAITGVPASGPDGNTKSGRGNESGTGRGGRKKTRQ 121

Query: 129 GQTAAAAAATEASTAATPTGMELELPVDPNEPTYCLCNQVSYGEMVACDNPN 179
             T  AAAATEA T   PTGM+L+LPVDPNEPTYC CNQVSYG MVACDNPN
Sbjct: 122 -TTLVAAAATEAQTTTNPTGMDLDLPVDPNEPTYCFCNQVSYGAMVACDNPN 172

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g02990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ING1_ARATH7.0e-5365.48PHD finger protein ING1 OS=Arabidopsis thaliana GN=ING1 PE=1 SV=1[more]
ING5_HUMAN1.5e-1540.44Inhibitor of growth protein 5 OS=Homo sapiens GN=ING5 PE=1 SV=1[more]
ING5_MOUSE3.4e-1539.39Inhibitor of growth protein 5 OS=Mus musculus GN=Ing5 PE=1 SV=1[more]
ING4_MOUSE8.3e-1433.76Inhibitor of growth protein 4 OS=Mus musculus GN=Ing4 PE=1 SV=2[more]
ING4_BOVIN1.4e-1334.36Inhibitor of growth protein 4 OS=Bos taurus GN=ING4 PE=2 SV=1[more]
BLAST of Cp4.1LG08g02990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L831_CUCSA2.7e-8092.49PHD finger protein ING OS=Cucumis sativus GN=Csa_3G133330 PE=3 SV=1[more]
A0A067DJ85_CITSI3.1e-6877.53PHD finger protein ING OS=Citrus sinensis GN=CISIN_1g025753mg PE=3 SV=1[more]
A0A151U2T5_CAJCA5.3e-6879.65PHD finger protein ING (Fragment) OS=Cajanus cajan GN=KK1_006249 PE=3 SV=1[more]
V4S0J5_9ROSI9.1e-6878.74PHD finger protein ING OS=Citrus clementina GN=CICLE_v10005726mg PE=3 SV=1[more]
A0A067DVJ8_CITSI9.1e-6878.74PHD finger protein ING OS=Citrus sinensis GN=CISIN_1g025753mg PE=3 SV=1[more]
BLAST of Cp4.1LG08g02990 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24010.13.9e-5465.48 RING/FYVE/PHD zinc finger superfamily protein[more]
AT1G54390.23.6e-1532.56 PHD finger protein-related[more]
BLAST of Cp4.1LG08g02990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075948|ref|XP_008438417.1|1.0e-8092.49PREDICTED: PHD finger protein ING1 [Cucumis melo][more]
gi|449432470|ref|XP_004134022.1|3.9e-8092.49PREDICTED: PHD finger protein ING1 isoform X1 [Cucumis sativus][more]
gi|502122420|ref|XP_004497737.1|6.9e-6980.57PREDICTED: PHD finger protein ING1 [Cicer arietinum][more]
gi|641823663|gb|KDO43053.1|4.5e-6877.53hypothetical protein CISIN_1g025753mg [Citrus sinensis][more]
gi|1012362422|gb|KYP73605.1|7.7e-6879.65Inhibitor of growth protein 5, partial [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR024610ING_N_histone_binding
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0035064 methylated histone binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g02990.1Cp4.1LG08g02990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011011Zinc finger, FYVE/PHD-typeunknownSSF57903FYVE/PHD zinc fingercoord: 147..178
score: 1.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 131..178
score: 7.
IPR024610Inhibitor of growth protein, N-terminal histone-bindingPFAMPF12998INGcoord: 7..83
score: 2.1
IPR024610Inhibitor of growth protein, N-terminal histone-bindingSMARTSM01408ING_2coord: 2..83
score: 0.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g02990Cucsa.256060Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g02990CmaCh06G012750Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g02990CmoCh06G012840Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g02990Cla021458Watermelon (97103) v1cpewmB845
Cp4.1LG08g02990Csa3G133330Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g02990MELO3C006348Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g02990ClCG05G003690Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g02990CSPI03G11310Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g02990Lsi05G017980Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g02990MELO3C006348.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g02990CsaV3_3G011410Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g02990CsGy3G011340Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g02990Carg06263Silver-seed gourdcarcpeB1333
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g02990Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g02990Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG08g02990Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g02990Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g02990Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG08g02990Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g02990Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g02990Cucurbita maxima (Rimu)cmacpeB554
Cp4.1LG08g02990Cucurbita maxima (Rimu)cmacpeB650
Cp4.1LG08g02990Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g02990Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g02990Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g02990Cucurbita moschata (Rifu)cmocpeB508
Cp4.1LG08g02990Cucurbita moschata (Rifu)cmocpeB599
Cp4.1LG08g02990Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g02990Wild cucumber (PI 183967)cpecpiB851
Cp4.1LG08g02990Wild cucumber (PI 183967)cpecpiB858
Cp4.1LG08g02990Cucumber (Chinese Long) v2cpecuB858
Cp4.1LG08g02990Cucumber (Chinese Long) v2cpecuB849
Cp4.1LG08g02990Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g02990Bottle gourd (USVL1VR-Ls)cpelsiB716
Cp4.1LG08g02990Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g02990Watermelon (Charleston Gray)cpewcgB792
Cp4.1LG08g02990Watermelon (97103) v1cpewmB843
Cp4.1LG08g02990Watermelon (97103) v1cpewmB853
Cp4.1LG08g02990Melon (DHL92) v3.5.1cpemeB803
Cp4.1LG08g02990Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g02990Cucumber (Gy14) v2cgybcpeB278
Cp4.1LG08g02990Cucumber (Gy14) v2cgybcpeB452
Cp4.1LG08g02990Melon (DHL92) v3.6.1cpemedB944
Cp4.1LG08g02990Silver-seed gourdcarcpeB0329
Cp4.1LG08g02990Silver-seed gourdcarcpeB0336
Cp4.1LG08g02990Silver-seed gourdcarcpeB1101
Cp4.1LG08g02990Silver-seed gourdcarcpeB1507
Cp4.1LG08g02990Cucumber (Chinese Long) v3cpecucB1045
Cp4.1LG08g02990Cucumber (Chinese Long) v3cpecucB1053
Cp4.1LG08g02990Wax gourdcpewgoB1100
Cp4.1LG08g02990Wax gourdcpewgoB1115
Cp4.1LG08g02990Wax gourdcpewgoB1116
Cp4.1LG08g02990Wax gourdcpewgoB1118