Cp4.1LG08g01770 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPeptidyl-prolyl cis-trans isomerase
LocationCp4.1LG08 : 3192032 .. 3197672 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGTTTAAATGTGTTTTTGAATTTCGCACGTTCGCAGAGCGGATCTAAAAATGGTGGGTATTATTCTCTCTCGTCGTCATTTGATCGAACACCTTGGCTTCTTTTTCTTTCAGCTGCCCATCCATGGAGGAATTTCATTTTGTGCCTCTGATTTTCCATTTTTCCATTTGTGTTCACAGTCTGTTACTTTGCACACAAATCTCGGCGACATCAAGTGCGAGATCTTTTGCGATGAAGTCCCGAAATCTGCCGAGGCAAGTTCATCGCTCGTCTCCTCTATCTTCTTTTGTTAAGTTTACTCCATGTTTCATGGATGTTCTTGTTTAGGTTGGAATTGATAAGTGATAATTTGTTTTTCTCATCTTTTTGTATCCGCAAAGTTGATCGGATTCTTCTTTAACTCTGGTAGTGATTAGTCGTGGAGAGAACTTAATTCATCGAGATGCACTGTATTCTCGAGGAGCTAGGTTGCAATTTTTTGTGAAAGCTTTGTTGATTAGTTTTTGCAACTACTGTATTTTCATTTAATTGGAATTTCTACGAAACCTCGAGCGCGCAGTTTTTGCTAGTTGCTAGAGTTTTATGGCTTGTCATTTTTCTTTAGTTTCACTTTCACGGTGGGGGTAGATGATAGAACAAAGAAATACTACTGGTACCTGTAAGTAGTTTCTGGGCAAATGGTTTCATTGAGATTAAGCTAACGCCTAATTGACTTCTGTTGACATACGTCAGTAATGAAAGTTAGTGTGCTTTCTCCTTTGTTGTTTCAAATGAATGGAAGGTTCTGAAGTTCACTTAACCTGAGCAATTTTGGCATGGCATGTATTGGTAATTACGTTGAGACGTTATTAGATAATTCCCATTGGTTTTGGATAATGCATTGGTTTATCGTGTTTTTTGGATTGGCTTTGAAAATAGAGAGGTAGCAAGGTTATGGGTATGGATATTTTCCATATGATAAGCGTCAGCAAGTTTGGATTTGCAATGCTAGAGGTCTTTCTAGGATCCTTGCAAACTTTCACAAATAACGCTAACAAATGATTTGATCGAACTTTGAATCTATAATGGTCACCCTTAGATCCCAAGACAACTCGCTCCAAAATTAGCTTGATCAAGACTAATCCAATGAATCGATTTTACTTCAAACCTAAACCAAGATTTGTAAAAGAAAGATAACACCAAAAGGCCTCTTGAATCTTCTTTGTCTTGCATGTTGTAATTGCTCCTTCGGGAACATACGGTTGGATTCATATCACCATATTTAGGAGGTATTGAGCTGTAGACATCCGAATGATATCTTTTTTAAGGCCAATGTATATTTGCACTCATGAAAACTGGAGAGTTGTCAATCCTCTTTCAGTTTTTCTTTTGTAGCACAAGAAGCTGTTTGCCATTTTCCGAACAGTTTTTTCCTTTGCATGTTTATTTGCAGCTGAGCTTGTTATCCTATAATGTCATCTTTCTTTTGTACGTGGAAAAATGTTTTAACGTTAGAGTGACCAGAAAATATTGGCTAGAATTCTGCTTCTGCTCATCTTGTGTCTGCTAGATTATTGTTGTCTGCAATGTTCATACTAACACTAATGTTTTATTGGTTATAGAACTTTTTGGCACTATGTGCTAGTGGCTACTATGATGGAACCATATTCCACCGAAACATCAAAGGTTTTATGATACAAGGTGGAGATCCAACAGGCACGGGAAAAGGAGGAACCAGCATATGGGGCAAAAAGTTCAATGACGAGATAAGAGAGTCGCTCAAGGTATGTAATATGATATGCATCATGTCATGTAGCAGTTTACTAAACTCGCACGTCTTAAGACGAGAGACGCTTATTCAATGAAAATTTGCATCCCTAACCATTCTGGTGAAGCTGAGATCCAAAGTGGAAATTCAAGAAGCCTTCCGTCCTAAGCTGTTTATATGTTAGAATCTGATTCTTATTCTAAAAGGTTCTTTCTGTTCTGGTTTTATAGCACAATGCAAGAGGGATATTATCAATGGCTAATAGTGGAGCAAATACGAACGGAAGCCAATTTTTTATAACTTACGCAAAGCAGCCACATCTGAATGGATTATACACTGTGTTCGGCAGAGTGATTCATGGGTTTGAAGTACTTGATATCATGGAAAAGGTACGATTTTTGTTTCAATAATACTCCTAAAACTTTAAAAAGTTTAAAAAATAACTTTAATTAAGTTTGAATAGAAAACTTTAAAAATTTGTCTAATTTTTTACCTTCCAAAAACGTTTAAAAACGTTCAAAAACACTTTTACCATATGGAAAACGTTGAAGTTTCATTGATACTTTAATCATTTAATTGTATTCATAAGATGCAATTTTTACATTTGTCTTCCTGAATTGTGAATGTTAATCTTGGTTGTGTGATTAATTGAATAGTTGGTGAGTTTTTATGTTATTTTGATCTTATTCATCTTTCTATTTCTTTCTCTATATTATTTGGTGATTGTATTTGTGCTAATTAAGTAAGCAACACCAATCTTGCGGATGATATTCTGACGTTCTTACTTCATATTAATTAAAACTTAGATCATACACTTGTGGTATTGCATTGAATAATTTTACGCTACACCAACGAAGAGAATGTCATTGGTATTTCATTTAAAACGCAATGGTATTTTTAAAGATTAGGGGGTATCTATACTTGTTCGGCTGATATATGTGCACAGCTTTGCATTTAGCTTGTTGGGTATGATCTGAAGTGCGACTAGCATAGTCTTTAGCTAGCGAATTACTGTTTTTTCATCGCATCTGTATACACTTTTGAGTCAACTGTTAAAAATGTTTAAATTCTTAGCATCTGCATAAATGTCTTGCTGATGTATAGCTTGGTGCAGACTCAAACTGGATCGGGAGATCGTCCTCTCGCCGAGATCAGGCTCAATCGGGTGACGATACATGCTAATCCTCTTGCGGGTTAACCTTTGAACATTGGATGAAAGTCTCATTATTCAAGAAGTGGCATTTAGCGTTAGCATGAAAAGCTCTGCTAATCTGAGAGGGGTTCAAAAGACAGAATTAGAAGTAAACCATACAAAACTAACAGAGAACGGGCTTGCAGAGGTACTTTTGAATTTGCAAGTATCGTTAACTTTATGTATATTTATTTAAGCTTAAATTATGAACTTGGTCTCTATGGTTTTGAGAAACCTAAAATTTAGTCTTTAGGATTTTAAATCTTCATATTATTTCCTATACTTATGCCTTTAACTTAGCCATGTAAATAGAATCATCAAATGCCGAATAAAGAAGTTGAGCCTCGAAGGTGTAGTAAAAAAAAGTAGTGACTCTAAGTGTCGAACAAAAGGCGTACTTTGTTCGAGGGCTCCAAAGAAAGGAGTCGAGCCTCAATTAAGGGGAGGCTGTTTGATGGCTCTATAGGTCTCAGGAGAGGCTCTATGGTGTACTTTGTTCGAGTGAAGGATTGTTGAGGATTGTTGAGAATTGTTGGGATGGAGTCCCACCTTTCATGGATTTATAAGTAAAGGAATACATCAAGTTTGGAGATGTCGGAGCTGTAAATATGGTGGCGTTTATTTGATATTCTCATATCTTCTTGAGGTACCTTCCTTTTGTGCATCGATTTTAGATATATCCATTATGTAAATATCTGAGCTTTCATTTTCTTGTTACCGGTGAATGATTAATACTGCGTAATATATATAAGATATTGACGCAAAAGTTGTTCCACAGCCCAAGCTCACCGTCAGTAAATATTGTCTCTTTAGGCTTTCACTCTTAAGCTTCTCTTCAAGGTCTATTAGGAAGAGGTTTCCACACTCTTATAAGAAATGTTTCGTTCTCCTCTTCAACCGATATGGGATCTCACAATTCACTCCCATTGGAGCAGCATCCTCGCTAACACACCGCTCGATACTTAGCTCTAATACCATTTGTAATACCTCAAGCTCACCGCTAGCATATATTGTCCTCTCTGGACTTTCCCTCAAGGTTTTAAGGCGTGTCTACTAGGGAAGTTTCCACACTCTTATAAGGAATGTTTCTTTCTCCTCTCCAATTGATGTGTGATCTCACAATCCATCTCCCTTGTAACAGCCCAAGTCCACCTCTAGAAAATATTATCCACGTTGGTCTGTTACTTATCACCGTCAGCCTCACGATTTTAAACACGTCTACTAGAGAGATGTTTCCATACTCGGAACATTTTGTCCCCTTCTCCAACCGATGTAGATCTCACACATCATGTTCCTAAAAACATTTAAACAACAGCCTTCAGCCCGCGTTATGAACCAAACCGAACCGAACCGATGGCAATTTGATACATATATATATATATATATATTTTTTTTTTTAGTATATCAGCCGGTTAATCTTTTTCTATTTGTTTTTTATAGAATTGGAGGGTGAGATCCAAGAAGTGGTTCAATCATTGCTTCATTGAAACTCATATTCGGAAGCATAATAATACCCAAAGAGCAGTGGGAGGTGGCACCTCATCCTCTTGGATTGGCTTCCTCCTTGTCACACAGGTATTGACTTCTCACTCATCCCACTTCATCTTCAACTAATTATGGCTTCCCATTGTCTGGACTTTTGCTTCAAATAATAATTACTCAAACGAACATATATTTTTTATTTATCATATCTAATTTAATATCACTTCTATATATTTTTTAATAATAAATCATTGTATCTTTTTTTTTTTTTTTCTTAAAAAAGTATTTGGGTTTAATTTTTTTTCTTTTTTTTTTCGTTTCCCCAACTTCTATTAAAAAAATTAATCTATGAAATTATTTTTTTTTTAAAAAAAAATAATATATTAAAATGCCATTTTGGTTCGTGTATTTCGAGTTTGGTTGGTATCTAAAATTTAATTCTTATACTTTCATTTAAACTTAAAATTGGTTTTATAAACTTAGAAAACATGTTTATATGGTGTGTTGCAATTTTGATAAAATTAAATTTGTGAAAGTAAAGTAAAGTAAAGTAGAAGTGGTGAATGGGTTTGGTTGTTTTGCAAAGCAATATTGGAAAATTGAGTTTGGGAGTTTTGGATTCGATTCCTGTGGACTTAAGTGAACCGACGGCCCAATCCTTTGACAAAAAGGACATTAACTTTTAAATTTTTGCACAAATGCCCTTTTACATTGTGTTTTTATCAAATTAACCCTTTTATATTGGATAATTATGGTTAAGGTTATATATACTATATTTAATAAAAATATAAATATTGTATTTGTTGTTTACTAAATTGTGGTGGGTTAGGCACCCAATCTTCCCATGGTATTTGAGGGCAAACAACATAGCGGTTCCGAGAATTTGAGTGAAATAAAAGAGGTTGAAACGAGAAAAATGATGTTTATATGATACCATTTATAGTTTCTTATTTTTTTTTTTCTTTGTAAATTAAGTTAAACATGAACTAGTTCGAATTGAATTAGAAAGCTACGAGTTCAGGGCATGCGCTAGCGAACCATAGGGTTGAGGTCGAAGCCCCAAAAAAATTGGGTCTTTTCTCCTTTACCATGAGGTTGATCGACTATGTTCAAATAATCTTGAAAATAATTTCTAAACGATGAGTGTATCCTTAATAGTAACTTTCATGTGGTCATAAAATGTACATAATGAAGGGGTATTTTGGTAATTTCATAATGA

mRNA sequence

TATGTTTAAATGTGTTTTTGAATTTCGCACGTTCGCAGAGCGGATCTAAAAATGTCTGTTACTTTGCACACAAATCTCGGCGACATCAAGTGCGAGATCTTTTGCGATGAAGTCCCGAAATCTGCCGAGGCAAGTTCATCGCTCAACTTTTTGGCACTATGTGCTAGTGGCTACTATGATGGAACCATATTCCACCGAAACATCAAAGGTTTTATGATACAAGGTGGAGATCCAACAGGCACGGGAAAAGGAGGAACCAGCATATGGGGCAAAAAGTTCAATGACGAGATAAGAGAGTCGCTCAAGACTCAAACTGGATCGGGAGATCGTCCTCTCGCCGAGATCAGGCTCAATCGGGTGACGATACATGCTAATCCTCTTGCGGGTTAACCTTTGAACATTGGATGAAAGTCTCATTATTCAAGAAGTGGCATTTAGCGTTAGCATGAAAAGCTCTGCTAATCTGAGAGGGGTTCAAAAGACAGAATTAGAAGTAAACCATACAAAACTAACAGAGAACGGGCTTGCAGAGAATTGGAGGGTGAGATCCAAGAAGTGGTTCAATCATTGCTTCATTGAAACTCATATTCGGAAGCATAATAATACCCAAAGAGCAGTGGGAGGTGGCACCTCATCCTCTTGGATTGGCTTCCTCCTTGTCACACAGGTATTGACTTCTCACTCATCCCACTTCATCTTCAACTAATTATGGCTTCCCATTGTCTGGACTTTTGCTTCAAATAATAATTACTCAAACGAACATATATTTTTTATTTATCATATCTAATTTAATATCACTTCTATATATTTTTTAATAATAAATCATTGTATCTTTTTTTTTTTTTTTCTTAAAAAAGTATTTGGGTTTAATTTTTTTTCTTTTTTTTTTCGTTTCCCCAACTTCTATTAAAAAAATTAATCTATGAAATTATTTTTTTTTTAAAAAAAAATAATATATTAAAATGCCATTTTGGTTCGTGTATTTCGAGTTTGGTTGGTATCTAAAATTTAATTCTTATACTTTCATTTAAACTTAAAATTGGTTTTATAAACTTAGAAAACATGTTTATATGGTGTGTTGCAATTTTGATAAAATTAAATTTGTGAAAGTAAAGTAAAGTAAAGTAGAAGTGGTGAATGGGTTTGGTTGTTTTGCAAAGCAATATTGGAAAATTGAGTTTGGGAGTTTTGGATTCGATTCCTGTGGACTTAAGTGAACCGACGGCCCAATCCTTTGACAAAAAGGACATTAACTTTTAAATTTTTGCACAAATGCCCTTTTACATTGTGTTTTTATCAAATTAACCCTTTTATATTGGATAATTATGGTTAAGGTTATATATACTATATTTAATAAAAATATAAATATTGTATTTGTTGTTTACTAAATTGTGGTGGGTTAGGCACCCAATCTTCCCATGGTATTTGAGGGCAAACAACATAGCGGTTCCGAGAATTTGAGTGAAATAAAAGAGGTTGAAACGAGAAAAATGATGTTTATATGATACCATTTATAGTTTCTTATTTTTTTTTTTCTTTGTAAATTAAGTTAAACATGAACTAGTTCGAATTGAATTAGAAAGCTACGAGTTCAGGGCATGCGCTAGCGAACCATAGGGTTGAGGTCGAAGCCCCAAAAAAATTGGGTCTTTTCTCCTTTACCATGAGGTTGATCGACTATGTTCAAATAATCTTGAAAATAATTTCTAAACGATGAGTGTATCCTTAATAGTAACTTTCATGTGGTCATAAAATGTACATAATGAAGGGGTATTTTGGTAATTTCATAATGA

Coding sequence (CDS)

ATGTCTGTTACTTTGCACACAAATCTCGGCGACATCAAGTGCGAGATCTTTTGCGATGAAGTCCCGAAATCTGCCGAGGCAAGTTCATCGCTCAACTTTTTGGCACTATGTGCTAGTGGCTACTATGATGGAACCATATTCCACCGAAACATCAAAGGTTTTATGATACAAGGTGGAGATCCAACAGGCACGGGAAAAGGAGGAACCAGCATATGGGGCAAAAAGTTCAATGACGAGATAAGAGAGTCGCTCAAGACTCAAACTGGATCGGGAGATCGTCCTCTCGCCGAGATCAGGCTCAATCGGGTGACGATACATGCTAATCCTCTTGCGGGTTAA

Protein sequence

MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKTQTGSGDRPLAEIRLNRVTIHANPLAG
Homology
[Close]
BLAST of Cp4.1LG08g01770 vs. Swiss-Prot
Match: CP18A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-1 OS=Arabidopsis thaliana GN=CYP18-1 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-39
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPKSAE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKSAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          P GTGKGGTSIWGKKFNDEIR+SLK
Sbjct: 61 PKGTGKGGTSIWGKKFNDEIRDSLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. Swiss-Prot
Match: PPIL3_CRYNJ (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CYP10 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-32
Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIK E+FC+ VP++AE     NFLALCASG YDGT+FHRNI+GFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKIELFCESVPRTAE-----NFLALCASGQYDGTLFHRNIRGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGG SIWG+ F+DEIR++L+
Sbjct: 61 PTGTGKGGQSIWGRPFSDEIRQTLR 80

[Close]
BLAST of Cp4.1LG08g01770 vs. Swiss-Prot
Match: PPIL3_CRYNB (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CYP10 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-32
Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIK E+FC+ VP++AE     NFLALCASG YDGT+FHRNI+GFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKIELFCESVPRTAE-----NFLALCASGQYDGTLFHRNIRGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGG SIWG+ F+DEIR++L+
Sbjct: 61 PTGTGKGGQSIWGRPFSDEIRQTLR 80

[Close]
BLAST of Cp4.1LG08g01770 vs. Swiss-Prot
Match: PPIL3_RHIO9 (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp4 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.8e-30
Identity = 66/91 (72.53%), Postives = 71/91 (78.02%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQ--- 60
          MSVTLHT+LGDIK E+FC+ VPK+AE     NFLALCASGYYD   FHRNI GFMIQ   
Sbjct: 1  MSVTLHTDLGDIKIEVFCEAVPKTAE-----NFLALCASGYYDNNTFHRNIPGFMIQVHE 60

Query: 61 ---GGDPTGTGKGGTSIWGKKFNDEIRESLK 86
              GDPTGTGKGG SIWGKKFNDEIR +LK
Sbjct: 61 HLHTGDPTGTGKGGNSIWGKKFNDEIRSTLK 86

[Close]
BLAST of Cp4.1LG08g01770 vs. Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.4e-29
Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHT++GDIK E+FC+  PK+ E     NFLALCAS YY+G +FHRNIKGFM+Q GD
Sbjct: 1  MSVTLHTDVGDIKIEVFCERTPKTCE-----NFLALCASNYYNGCVFHRNIKGFMVQTGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTG+GG+SIWGKKF DE  E LK
Sbjct: 61 PTGTGRGGSSIWGKKFEDEYSEYLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. TrEMBL
Match: A0A061DTU8_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_005487 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-48
Identity = 104/137 (75.91%), Postives = 105/137 (76.64%), Query Frame = 1 

Query: 1   MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
           MSVTLHTNLGDIKCEIFCDEV K+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1   MSVTLHTNLGDIKCEIFCDEVAKTAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61  PTGTGKGGTSIWGKKFNDEIRESL-------------------------KTQTGSGDRPL 113
           PTGTGKGGTSIWGKKFNDEIRESL                         KTQTG GDRPL
Sbjct: 61  PTGTGKGGTSIWGKKFNDEIRESLKPHLNGLYTVFGKVIHGFEVLDIMEKTQTGPGDRPL 120

[Close]
BLAST of Cp4.1LG08g01770 vs. TrEMBL
Match: M5X2L6_PRUPE (Peptidyl-prolyl cis-trans isomerase OS=Prunus persica GN=PRUPE_ppa012641mg PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-38
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPK+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKTAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGGTSIWGKKFNDEIRESLK
Sbjct: 61 PTGTGKGGTSIWGKKFNDEIRESLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. TrEMBL
Match: A0A0K9S3U7_SPIOL (Peptidyl-prolyl cis-trans isomerase OS=Spinacia oleracea GN=SOVF_003100 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-38
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPK+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKAAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGGTSIWGKKFNDEIRESLK
Sbjct: 61 PTGTGKGGTSIWGKKFNDEIRESLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. TrEMBL
Match: M4EV24_BRARP (Peptidyl-prolyl cis-trans isomerase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-38
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPKSAE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKSAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGGTSIWGKKFNDEIR+SLK
Sbjct: 61 PTGTGKGGTSIWGKKFNDEIRDSLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. TrEMBL
Match: A0A0A0L4C8_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G125010 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-38
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1   MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
           MSVTLHTNLGDIKCEIFCDEVPKSAE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 35  MSVTLHTNLGDIKCEIFCDEVPKSAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 94

Query: 61  PTGTGKGGTSIWGKKFNDEIRESLK 86
           PTGTGKGGTSIWGKKFNDEI+ESLK
Sbjct: 95  PTGTGKGGTSIWGKKFNDEIKESLK 114

[Close]
BLAST of Cp4.1LG08g01770 vs. TAIR10
Match: AT1G01940.1 (AT1G01940.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-40
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPKSAE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKSAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          P GTGKGGTSIWGKKFNDEIR+SLK
Sbjct: 61 PKGTGKGGTSIWGKKFNDEIRDSLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. TAIR10
Match: AT5G67530.1 (AT5G67530.1 plant U-box 49)

HSP 1 Score: 97.8 bits (242), Expect = 4.4e-21
Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 1 

Query: 3   VTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGDPT 62
           V   T  GD+  E+ CD  P++ E     NF+ LC  GYY+G  FHR+I+ FMIQGGDPT
Sbjct: 346 VQFQTTHGDLNIELHCDIAPRACE-----NFITLCERGYYNGVAFHRSIRNFMIQGGDPT 405

Query: 63  GTGKGGTSIWGKKFNDEIRESL 85
           GTGKGG SIWGK F DE    L
Sbjct: 406 GTGKGGESIWGKPFKDEPNSKL 422

[Close]
BLAST of Cp4.1LG08g01770 vs. TAIR10
Match: AT3G44600.1 (AT3G44600.1 cyclophilin71)

HSP 1 Score: 94.4 bits (233), Expect = 4.9e-20
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 1 

Query: 2   SVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGDP 61
           +V +HT LGDI  +++ +E PK+ E     NF   C +GYYD  +FHR I+GFMIQ GDP
Sbjct: 477 NVIMHTTLGDIHMKLYPEECPKTVE-----NFTTHCRNGYYDNHLFHRVIRGFMIQTGDP 536

Query: 62  TGTGKGGTSIWGKKFNDEIRESLK 86
            G G GG SIWG++F DE  +SL+
Sbjct: 537 LGDGTGGQSIWGREFEDEFHKSLR 555

[Close]
BLAST of Cp4.1LG08g01770 vs. TAIR10
Match: AT2G36130.1 (AT2G36130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 90.1 bits (222), Expect = 9.2e-19
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 1 

Query: 3  VTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGDPT 62
          VTL T++G    E++    P++       NFL L   GYYD  +FHR +K F++QGGDPT
Sbjct: 12 VTLETSMGPFTVEMYYKHSPRTCR-----NFLELSRRGYYDNVLFHRIVKDFIVQGGDPT 71

Query: 63 GTGKGGTSIWGKKFNDEIRESLKTQTGSG 92
          GTG+GG SI+G KF DEI + LK  TG+G
Sbjct: 72 GTGRGGESIYGSKFEDEINKELK-HTGAG 94

[Close]
BLAST of Cp4.1LG08g01770 vs. TAIR10
Match: AT4G33060.1 (AT4G33060.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-16
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 1 

Query: 3  VTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGDPT 62
          V ++T  G I  E++  E PKS       NF+ LC  GY+D TIFHR I GF++QGGDPT
Sbjct: 15 VIVNTTHGPIDVELWPKEAPKSVR-----NFVQLCLEGYFDNTIFHRVIPGFLVQGGDPT 74

Query: 63 GTGKGGTSIWGKKFNDEIRESLK 86
          G+G GG SI+G  F DE    L+
Sbjct: 75 GSGTGGDSIYGGVFADEFHSRLR 92

[Close]
BLAST of Cp4.1LG08g01770 vs. NCBI nr
Match: gi|590722880|ref|XP_007052022.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-48
Identity = 104/137 (75.91%), Postives = 105/137 (76.64%), Query Frame = 1 

Query: 1   MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
           MSVTLHTNLGDIKCEIFCDEV K+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1   MSVTLHTNLGDIKCEIFCDEVAKTAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61  PTGTGKGGTSIWGKKFNDEIRESL-------------------------KTQTGSGDRPL 113
           PTGTGKGGTSIWGKKFNDEIRESL                         KTQTG GDRPL
Sbjct: 61  PTGTGKGGTSIWGKKFNDEIRESLKPHLNGLYTVFGKVIHGFEVLDIMEKTQTGPGDRPL 120

[Close]
BLAST of Cp4.1LG08g01770 vs. NCBI nr
Match: gi|848886754|ref|XP_012843618.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 isoform X2 [Erythranthe guttata])

HSP 1 Score: 194.9 bits (494), Expect = 7.5e-47
Identity = 100/137 (72.99%), Postives = 103/137 (75.18%), Query Frame = 1 

Query: 1   MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
           M+VTLHTNLGDIKCEIFCDEVPK+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1   MAVTLHTNLGDIKCEIFCDEVPKTAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61  PTGTGKGGTSIWGKKFNDEIRESL-------------------------KTQTGSGDRPL 113
           PT TGKGGTSIWGKKFNDEIRESL                         K QTG GDRPL
Sbjct: 61  PTNTGKGGTSIWGKKFNDEIRESLKPHLNGQYTIFGKVIHGFEILDIMEKAQTGPGDRPL 120

[Close]
BLAST of Cp4.1LG08g01770 vs. NCBI nr
Match: gi|1009142612|ref|XP_015888816.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 [Ziziphus jujuba])

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-38
Identity = 80/85 (94.12%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPKSAE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKSAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGGTSIWGKKFNDEIRESLK
Sbjct: 61 PTGTGKGGTSIWGKKFNDEIRESLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. NCBI nr
Match: gi|902239936|gb|KNA25807.1| (hypothetical protein SOVF_003100 [Spinacia oleracea])

HSP 1 Score: 165.2 bits (417), Expect = 6.4e-38
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPK+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKAAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGGTSIWGKKFNDEIRESLK
Sbjct: 61 PTGTGKGGTSIWGKKFNDEIRESLK 80

[Close]
BLAST of Cp4.1LG08g01770 vs. NCBI nr
Match: gi|596009540|ref|XP_007218532.1| (hypothetical protein PRUPE_ppa012641mg [Prunus persica])

HSP 1 Score: 165.2 bits (417), Expect = 6.4e-38
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 1 

Query: 1  MSVTLHTNLGDIKCEIFCDEVPKSAEASSSLNFLALCASGYYDGTIFHRNIKGFMIQGGD 60
          MSVTLHTNLGDIKCEIFCDEVPK+AE     NFLALCASGYYDGTIFHRNIKGFMIQGGD
Sbjct: 1  MSVTLHTNLGDIKCEIFCDEVPKTAE-----NFLALCASGYYDGTIFHRNIKGFMIQGGD 60

Query: 61 PTGTGKGGTSIWGKKFNDEIRESLK 86
          PTGTGKGGTSIWGKKFNDEIRESLK
Sbjct: 61 PTGTGKGGTSIWGKKFNDEIRESLK 80

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CP18A_ARATH2.0e-3991.76Peptidyl-prolyl cis-trans isomerase CYP18-1 OS=Arabidopsis thaliana GN=CYP18-1 P... [more]
PPIL3_CRYNJ1.8e-3275.29Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans var. neofo... [more]
PPIL3_CRYNB1.8e-3275.29Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans var. neofo... [more]
PPIL3_RHIO93.8e-3072.53Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus delemar (strain RA 99-880... [more]
PPIL3_RAT2.4e-2969.41Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV... [more]
BLAST of Cp4.1LG08g01770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061DTU8_THECC1.3e-4875.91Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_005487 PE=3 SV=1[more]
M5X2L6_PRUPE4.5e-3892.94Peptidyl-prolyl cis-trans isomerase OS=Prunus persica GN=PRUPE_ppa012641mg PE=3 ... [more]
A0A0K9S3U7_SPIOL4.5e-3892.94Peptidyl-prolyl cis-trans isomerase OS=Spinacia oleracea GN=SOVF_003100 PE=3 SV=... [more]
M4EV24_BRARP4.5e-3892.94Peptidyl-prolyl cis-trans isomerase OS=Brassica rapa subsp. pekinensis PE=3 SV=1[more]
A0A0A0L4C8_CUCSA4.5e-3892.94Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G125010 PE=3 SV=1[more]
BLAST of Cp4.1LG08g01770 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01940.11.1e-4091.76 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT5G67530.14.4e-2154.88 plant U-box 49[more]
AT3G44600.14.9e-2051.19 cyclophilin71[more]
AT2G36130.19.2e-1949.44 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT4G33060.11.1e-1649.40 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein[more]
BLAST of Cp4.1LG08g01770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|590722880|ref|XP_007052022.1|1.8e-4875.91Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein isoform 2 [T... [more]
gi|848886754|ref|XP_012843618.1|7.5e-4772.99PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 isoform X2 [Erythranthe g... [more]
gi|1009142612|ref|XP_015888816.1|2.9e-3894.12PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 [Ziziphus jujuba][more]
gi|902239936|gb|KNA25807.1|6.4e-3892.94hypothetical protein SOVF_003100 [Spinacia oleracea][more]
gi|596009540|ref|XP_007218532.1|6.4e-3892.94hypothetical protein PRUPE_ppa012641mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR024936Cyclophilin-type_PPIase
IPR020892Cyclophilin-type_PPIase_CS
IPR002130Cyclophilin-type_PPIase_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01770.1Cp4.1LG08g01770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 16..31
score: 2.4E-5coord: 47..59
score: 2.
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 3..89
score: 1.5
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROFILEPS50072CSA_PPIASE_2coord: 6..79
score: 13
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 42..59
scor
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 4..85
score: 7.1
NoneNo IPR availablePANTHERPTHR11071:SF256SUBFAMILY NOT NAMEDcoord: 4..85
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g01770CmaCh06G011240Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g01770CmaCh14G019900Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g01770CmoCh14G020500Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g01770CmoCh06G011510Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g01770Csa3G125010Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g01770MELO3C006176Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g01770ClCG05G002110Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g01770CSPI03G09410Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g01770Lsi05G019740Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g01770MELO3C006176.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g01770Bhi01G000200Wax gourdcpewgoB1106
Cp4.1LG08g01770CsGy3G009490Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g01770Carg23896Silver-seed gourdcarcpeB0687
Cp4.1LG08g01770Carg14823Silver-seed gourdcarcpeB0885
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g01770Cp4.1LG03g17090Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g01770Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g01770Cucumber (Gy14) v1cgycpeB0797
Cp4.1LG08g01770Cucumber (Gy14) v1cgycpeB0969
Cp4.1LG08g01770Wild cucumber (PI 183967)cpecpiB875
Cp4.1LG08g01770Wild cucumber (PI 183967)cpecpiB879
Cp4.1LG08g01770Cucumber (Chinese Long) v2cpecuB877
Cp4.1LG08g01770Bottle gourd (USVL1VR-Ls)cpelsiB696
Cp4.1LG08g01770Watermelon (Charleston Gray)cpewcgB790
Cp4.1LG08g01770Watermelon (97103) v1cpewmB845
Cp4.1LG08g01770Watermelon (97103) v1cpewmB847
Cp4.1LG08g01770Watermelon (97103) v1cpewmB854
Cp4.1LG08g01770Melon (DHL92) v3.5.1cpemeB791
Cp4.1LG08g01770Cucumber (Gy14) v2cgybcpeB703
Cp4.1LG08g01770Cucumber (Gy14) v2cgybcpeB889
Cp4.1LG08g01770Melon (DHL92) v3.6.1cpemedB932
Cp4.1LG08g01770Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g01770Cucumber (Chinese Long) v3cpecucB1072
Cp4.1LG08g01770Cucumber (Chinese Long) v3cpecucB1077