Cp4.1LG08g01530 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATCGCACTGTACTGGATGTGACCTTGCTACCTCCATCCATGTCAGTCGGCTCGAACAAGAAGATAAATAAATTCAGATTTTAGAGAGAGAGAACGAAAATTTTGATTTCTCTCTGTCTCTTTCTCTCTAAAATGATTTATTAGTTATCAGGGAGTTCTTGAATTCTCGTCCTCTTTGGATATTTCTTTCTCTGAATTCTTGGCTAATGTAGTTTTCAGGGGTTTTGAAGTGGTGATTACCTTGAAAAATCGATTTGGATGTTCGAGATTGTTCGATTTTGATTAGGTATTTGAAATAAATGAGTTTGGGTTTGGTTTTGTTCCTCCCCTTGAATCTCGTGGTGAAGATCTTCAGATTCAGGTTTAAATTTAAGTTCTAAAGTCGAATTGAAGTTCTAGGTGCTGTGGATTCTTCTTTCAAAATCCAGGGTTTAATCGGATGGGTGCTAATTTATCGGATTGCAGTGGAAGAAATTGTCCGCTATTCATGTCTGGACTCGAAGATATGCCGGAAAATTGCGTGGCTCTGGTTCTGATGCATATGGACCCGCCGGAGATTTGCAAATTAGCCGGAGTGAACCGACTTTTCCGCGACGCTGCTTCGGCGGATTTCGTATGGGAATCGAAGTTGCCGTCTAATTATCAGTTTCTGATCGACAAAGCCCTGGAGTTCGAGGAGAAAGATAAAGCTATGATGAATTTGAGGAAGAAAGATGTTTATTCTAGGCTTTGTAAACGAAATCCCTTAAATGGCGTCTCGAAGGTTCTTCTCTCTGTTCTTTTTCTCTATTTAGAATCGTTGAATTTTGGATTATGAACTGTCGATTGATTTAGGGTTTTGAATTGGTGAAGGAGTTTTGGCTCGACAAGAGAACTGGAGGCTTGTCAATGGCGATTTCTTGGAAGGCATTGACGATTACTGGAATTGGTGATCGGAGATATTGGAATCATATCTCAACTGATGAATCTAGGTGAGATGATTTAAGAACTTTGATTTTGCATTGTTGTTGATCAATTTACTCTGTTTATCATTGGGATTTGATGATTTTGGTTAGCTTTTATTTGATGATTTTGAGAGTAAAAGAGTTGTTTGAATCATTCTTGGTTAGGAACTGAGCTTCGAAATCGTTCTTGGTTAGATTACGAAGTTTAGCCTATGAACTCTTGGGCTCGTGCCAACCTCGAAAATATTGTCTCTAGTGGAATAGAACATACGATGTCGAGTCTCTGTTTCTGGTTTAATTGTAACACCTTGCTCCCATTTTGACTGTATGTGATCTAGTATATTTGAACCCGATGAAAAAAATGGGATCACTTCTTATGGATGGGTCGTGAACTTCTTTTCTTGGAGAAGAAGCAATGACGATATTTGGGGAATAACCATAGATACTTTTAGAGACAAACTTGAAAGTTTAGAGACTGAATTTGTCGTTTATGTTCTTTCTTTGATGCACTTGTGCCATTGGAATTGGTTTCTTTGTTTATTGTGTTTTCACAATGACTTGTTTTTTAGAACGATTGAAGTTCGAAGTTCAACTTTTGAAGAAGTTGTGCTTGTGAACTAGAATATCCGGACCCGATGAATAAAATGGGATCACTTCTTATGGATGGGTCGTGTACTTCTTTTCTTGGAGAAGAAGCAATGATGATATTTGGGGAATAAGCATAGATACTTGAGACGAACTTGAAAGTTTAGAGACTGAATTTGTGATTTGCGTTCTTTCTTTGAGGCACTCGTGTCATTGGAATTGCTTTCTTTGTTTATTGTGGTTTCACAATGACCTGTTTTTTTTTTTCGAACGATTGAAGTTTGAAGTTTGACTTTCGAAGAACTGTCGAACTTGGGCTTGTGAACAATGATTTCAAGTGTAGCTGTGGTGAGGAAAGGATCGAAGTAACCTCGACCTTTAGATTCACACACAGTAATTTCAAAACCTTTACGATGGGTCGTGTACTTCTTTTCTTGGAGAAGAAGCAATGACGATATTTGGGGAATAAGCATAGATACTTGAGACGAACTTGAAAGTTTAGAGACTGAATTTGTGATTTGCGTTCTTTCTTTGAGGCACTCGTGCCATTGGAATTGCTTTCTTTGTTTATTGTGTTTTCACAATGACCTGTTTTTTTTTTCGAACGATTGAAGTTTGAAGTTTGACTTTCGAAGAACTGTCGAACTTGGGCTTGGGAACAATGATTTCAAGTGTAGCTGTGGTGAGGAAACGATCGAAGTCACCTCGACCTTTAGATTCACACAGTAATTTCAAAACCTTTACGAGTTACCCAATCACATAGCGCTGTAAAACAACCTAACAGACAGTATAATATCTGTATGAACTAACATTGATTCGGTTCGGTTTGGAAACAACATTAGAGCAATAACGAGTGTTTCTTTTCTTGTATTAGATTCGGGTGTGTTCAATCTGCTGGCTGTCTTCGTTTTAGATGTGATATTTCTTGTTTCTTGTTCGTAAATCCAGATTTCAGTCGATAGCTTATCTTCAACAAACATGGTGGTTCGAGGTGAAGGGAGAGCTGAAGTTCCAGTTCCCAGAAGGAAGATATGCAGTGTTCTTCCGGCTTCATCTCGGCAAACCATCGAAGAGACTCGGTCGTCGGATCTGCCTAATGGATCAAGTCCATGGCTGGGACGTAAAGCCAGTGAGGTTTCAGCTGACGACATCCGATAATCAGCACACCGAGTCACGGTGCTTCTTGGGCAGTCCTGGGAACTGGGTGAACTACCATGTGGGAGATTTCACCATTGAAAGTGGCAGCAGCAGCAGCAACATGATGAAGCTCAAATTCGCATTGACTCAGATTGATTGCACTCACACCAAAGGAGGGCTCTGCCTAGACTCTGTGCTCATACAGCCTAAAGATTTTGTAGCTAAAAACAACAGGTAAAATATCGAACCTCTTGCGGCTTTCTTTACTCGACGAACTCGGGATGGCTCGGAAGCCTGATGGGGTTCGAGACCAGCACTCCGAGTCTCCGAGCCTCCTTCGAGTCGATCGGTGAATCGGGAGGTCGGTCACTCACTTGTTGGAGCAATGCTTGGTTTTTCCAATTTTCAGACATGTTTTGTCTGAAAGTTTTGGTGTCATTTTATGTTTTTGAAACCTCCAAATGAACCAAATAGGGAGTGAAATGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGGGAAAAATGTGCAATTATTGGGACTTTGAGAATATTTTGTTATTTGTGTATAGATTTTTTTTAATTTTTAATTTTTAAATTTTTGGTTCTCTCAATGTAAAGTTTTGTATCAATAATATGACACTTTTACCCTTGCCAAAAAGAGAAAAAAAAATATATATATATACGAAGTGAAGATTCTCTTTCACGAGAAATTATTTGAAGAGGTCGTTGGACTGGTTGATGTGTATTAGAGAGAAACGACCAAAGTACTGGTTATTAGAAGTCGGGGCATGTAAAAACGACCAAAGTCTTGATGTGTATTAGAGAGAAACGACCAAAGTACTGATTATTAGAAGTCGAGGCATGTAAAAACGACCAATGTAAGACTGTGAACTGTATTGGAAACTTGGAAACTATTGGAA TGAATCGCACTGTACTGGATGTGACCTTGCTACCTCCATCCATGTCAGTCGGCTCGAACAAGAAGATAAATAAATTCAGATTTTAGAGAGAGAGAACGAAAATTTTGATTTCTCTCTGTCTCTTTCTCTCTAAAATGATTTATTAGTTATCAGGGAGTTCTTGAATTCTCGTCCTCTTTGGATATTTCTTTCTCTGAATTCTTGGCTAATGTAGTTTTCAGGGGTTTTGAAGTGGTGATTACCTTGAAAAATCGATTTGGATGTTCGAGATTGTTCGATTTTGATTAGGTATTTGAAATAAATGAGTTTGGGTTTGGTTTTGTTCCTCCCCTTGAATCTCGTGGTGAAGATCTTCAGATTCAGTGGAAGAAATTGTCCGCTATTCATGTCTGGACTCGAAGATATGCCGGAAAATTGCGTGGCTCTGGTTCTGATGCATATGGACCCGCCGGAGATTTGCAAATTAGCCGGAGTGAACCGACTTTTCCGCGACGCTGCTTCGGCGGATTTCGTATGGGAATCGAAGTTGCCGTCTAATTATCAGTTTCTGATCGACAAAGCCCTGGAGTTCGAGGAGAAAGATAAAGCTATGATGAATTTGAGGAAGAAAGATGTTTATTCTAGGCTTTGTAAACGAAATCCCTTAAATGGCGTCTCGAAGGAGTTTTGGCTCGACAAGAGAACTGGAGGCTTGTCAATGGCGATTTCTTGGAAGGCATTGACGATTACTGGAATTGGTGATCGGAGATATTGGAATCATATCTCAACTGATGAATCTAGATTTCAGTCGATAGCTTATCTTCAACAAACATGGTGGTTCGAGGTGAAGGGAGAGCTGAAGTTCCAGTTCCCAGAAGGAAGATATGCAGTGTTCTTCCGGCTTCATCTCGGCAAACCATCGAAGAGACTCGGTCGTCGGATCTGCCTAATGGATCAAGTCCATGGCTGGGACGTAAAGCCAGTGAGGTTTCAGCTGACGACATCCGATAATCAGCACACCGAGTCACGGTGCTTCTTGGGCAGTCCTGGGAACTGGGTGAACTACCATGTGGGAGATTTCACCATTGAAAGTGGCAGCAGCAGCAGCAACATGATGAAGCTCAAATTCGCATTGACTCAGATTGATTGCACTCACACCAAAGGAGGGCTCTGCCTAGACTCTGTGCTCATACAGCCTAAAGATTTTGTAGCTAAAAACAACAGGTAAAATATCGAACCTCTTGCGGCTTTCTTTACTCGACGAACTCGGGATGGCTCGGAAGCCTGATGGGGTTCGAGACCAGCACTCCGAGTCTCCGAGCCTCCTTCGAGTCGATCGGTGAATCGGGAGGTCGGTCACTCACTTGTTGGAGCAATGCTTGGTTTTTCCAATTTTCAGACATGTTTTGTCTGAAAGTTTTGGTGTCATTTTATGTTTTTGAAACCTCCAAATGAACCAAATAGGGAGTGAAATGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGGGAAAAATGTGCAATTATTGGGACTTTGAGAATATTTTGTTATTTGTGTATAGATTTTTTTTAATTTTTAATTTTTAAATTTTTGGTTCTCTCAATGTAAAGTTTTGTATCAATAATATGACACTTTTACCCTTGCCAAAAAGAGAAAAAAAAATATATATATATACGAAGTGAAGATTCTCTTTCACGAGAAATTATTTGAAGAGGTCGTTGGACTGGTTGATGTGTATTAGAGAGAAACGACCAAAGTACTGGTTATTAGAAGTCGGGGCATGTAAAAACGACCAAAGTCTTGATGTGTATTAGAGAGAAACGACCAAAGTACTGATTATTAGAAGTCGAGGCATGTAAAAACGACCAATGTAAGACTGTGAACTGTATTGGAAACTTGGAAACTATTGGAA ATGAGTTTGGGTTTGGTTTTGTTCCTCCCCTTGAATCTCGTGGTGAAGATCTTCAGATTCAGTGGAAGAAATTGTCCGCTATTCATGTCTGGACTCGAAGATATGCCGGAAAATTGCGTGGCTCTGGTTCTGATGCATATGGACCCGCCGGAGATTTGCAAATTAGCCGGAGTGAACCGACTTTTCCGCGACGCTGCTTCGGCGGATTTCGTATGGGAATCGAAGTTGCCGTCTAATTATCAGTTTCTGATCGACAAAGCCCTGGAGTTCGAGGAGAAAGATAAAGCTATGATGAATTTGAGGAAGAAAGATGTTTATTCTAGGCTTTGTAAACGAAATCCCTTAAATGGCGTCTCGAAGGAGTTTTGGCTCGACAAGAGAACTGGAGGCTTGTCAATGGCGATTTCTTGGAAGGCATTGACGATTACTGGAATTGGTGATCGGAGATATTGGAATCATATCTCAACTGATGAATCTAGATTTCAGTCGATAGCTTATCTTCAACAAACATGGTGGTTCGAGGTGAAGGGAGAGCTGAAGTTCCAGTTCCCAGAAGGAAGATATGCAGTGTTCTTCCGGCTTCATCTCGGCAAACCATCGAAGAGACTCGGTCGTCGGATCTGCCTAATGGATCAAGTCCATGGCTGGGACGTAAAGCCAGTGAGGTTTCAGCTGACGACATCCGATAATCAGCACACCGAGTCACGGTGCTTCTTGGGCAGTCCTGGGAACTGGGTGAACTACCATGTGGGAGATTTCACCATTGAAAGTGGCAGCAGCAGCAGCAACATGATGAAGCTCAAATTCGCATTGACTCAGATTGATTGCACTCACACCAAAGGAGGGCTCTGCCTAGACTCTGTGCTCATACAGCCTAAAGATTTTGTAGCTAAAAACAACAGGTAA MSLGLVLFLPLNLVVKIFRFSGRNCPLFMSGLEDMPENCVALVLMHMDPPEICKLAGVNRLFRDAASADFVWESKLPSNYQFLIDKALEFEEKDKAMMNLRKKDVYSRLCKRNPLNGVSKEFWLDKRTGGLSMAISWKALTITGIGDRRYWNHISTDESRFQSIAYLQQTWWFEVKGELKFQFPEGRYAVFFRLHLGKPSKRLGRRICLMDQVHGWDVKPVRFQLTTSDNQHTESRCFLGSPGNWVNYHVGDFTIESGSSSSNMMKLKFALTQIDCTHTKGGLCLDSVLIQPKDFVAKNNR
BLAST of Cp4.1LG08g01530 vs. Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 3.2e-92 Identity = 156/264 (59.09%), Postives = 201/264 (76.14%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 2.6e-86 Identity = 144/267 (53.93%), Postives = 196/267 (73.41%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 5.8e-86 Identity = 150/289 (51.90%), Postives = 206/289 (71.28%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.9e-85 Identity = 147/274 (53.65%), Postives = 196/274 (71.53%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75 Identity = 136/282 (48.23%), Postives = 185/282 (65.60%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TrEMBL
Match: A0A0A0L7J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124230 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 1.9e-136 Identity = 227/270 (84.07%), Postives = 249/270 (92.22%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TrEMBL
Match: V4TXT2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021409mg PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.8e-105 Identity = 179/264 (67.80%), Postives = 211/264 (79.92%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TrEMBL
Match: A0A067HDV5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022498mg PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.8e-105 Identity = 179/264 (67.80%), Postives = 211/264 (79.92%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TrEMBL
Match: V4U866_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021409mg PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103 Identity = 178/264 (67.42%), Postives = 210/264 (79.55%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TrEMBL
Match: D7U7J3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01930 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 6.2e-103 Identity = 172/271 (63.47%), Postives = 219/271 (80.81%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TAIR10
Match: AT3G61060.2 (AT3G61060.2 phloem protein 2-A13) HSP 1 Score: 337.0 bits (863), Expect = 1.2e-92 Identity = 156/265 (58.87%), Postives = 201/265 (75.85%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TAIR10
Match: AT1G63090.1 (AT1G63090.1 phloem protein 2-A11) HSP 1 Score: 320.1 bits (819), Expect = 1.5e-87 Identity = 144/267 (53.93%), Postives = 196/267 (73.41%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TAIR10
Match: AT5G52120.1 (AT5G52120.1 phloem protein 2-A14) HSP 1 Score: 318.9 bits (816), Expect = 3.3e-87 Identity = 150/289 (51.90%), Postives = 206/289 (71.28%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TAIR10
Match: AT1G12710.1 (AT1G12710.1 phloem protein 2-A12) HSP 1 Score: 316.6 bits (810), Expect = 1.6e-86 Identity = 147/274 (53.65%), Postives = 196/274 (71.53%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. TAIR10
Match: AT3G53000.1 (AT3G53000.1 phloem protein 2-A15) HSP 1 Score: 284.6 bits (727), Expect = 6.9e-77 Identity = 136/282 (48.23%), Postives = 185/282 (65.60%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. NCBI nr
Match: gi|449432197|ref|XP_004133886.1| (PREDICTED: F-box protein PP2-A13 [Cucumis sativus]) HSP 1 Score: 493.4 bits (1269), Expect = 2.8e-136 Identity = 227/270 (84.07%), Postives = 249/270 (92.22%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. NCBI nr
Match: gi|659075342|ref|XP_008438093.1| (PREDICTED: F-box protein PP2-A13 [Cucumis melo]) HSP 1 Score: 492.3 bits (1266), Expect = 6.1e-136 Identity = 227/264 (85.98%), Postives = 248/264 (93.94%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. NCBI nr
Match: gi|641867327|gb|KDO86011.1| (hypothetical protein CISIN_1g022498mg [Citrus sinensis]) HSP 1 Score: 390.6 bits (1002), Expect = 2.5e-105 Identity = 179/264 (67.80%), Postives = 211/264 (79.92%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. NCBI nr
Match: gi|567905328|ref|XP_006445152.1| (hypothetical protein CICLE_v10021409mg [Citrus clementina]) HSP 1 Score: 390.6 bits (1002), Expect = 2.5e-105 Identity = 179/264 (67.80%), Postives = 211/264 (79.92%), Query Frame = 1
BLAST of Cp4.1LG08g01530 vs. NCBI nr
Match: gi|567905326|ref|XP_006445151.1| (hypothetical protein CICLE_v10021409mg [Citrus clementina]) HSP 1 Score: 383.6 bits (984), Expect = 3.1e-103 Identity = 178/264 (67.42%), Postives = 210/264 (79.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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