Cp4.1LG07g09570 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g09570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	GDP-mannose 3,5-epimerase
Location	Cp4.1LG07 : 8667937 .. 8669577 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGCGCTGGAGAAACGAATTACGGTTCATACACATATCAAGAGCTTGAAAGAGAGCCATATTGGCCATCGGAGAATCTAAGAATCTCGATCACCGGCGCCGGTGGCTTTATTGCCTCTCATATTGCTAGGCGTTTGAAGAATGAAGGCCATTACATTATTGCTTCTGATTGGAAAAGGAATGAACACATGACAGAAGATATGTTCTGCAATGAATTTCATCTTGTTGATCTTAGAGTGATGGATAATTGCTTGAAGGTCACAAAGAATGTTGACCATGTCTTTAACTTGGCTGCTGACATGGGTGGAATGGGCTTCATTCAATCCAATCACTCTGTTATTATGTATAATAACACCATGATTAGCTTCAACATGCTTGAAGCTGCAAGAATCAATGGTGTTAAGAGGTTAGTTTTCATGGATATCTCTCTCAATTCATGGTTTATAAGCATTTTTGCTGGTATTGTCTCTACCCTTTAGAGGGTTATGGCCTTTAATTTGTGGGGCTGGGCGGGGCCAGGAGTAGCTAGAATTTTTAAGGGCACTGTCCTTACCAATGAGGAAGAAAGTACCCTCAATATGTCACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTATGCCTTCCCTTTTGGGCTTTTAAAATGCACTCGTATAAAGGGTGTTTCGTTCTCCTCCCCAATCGACGTGGGTTCTCACAATCCACCCCCGTTCAAGCCCAGCGTCCGTCACTCGTTCCTTTCTCCAATTGATGTGGGACCCCACCAAATCCACCCCTTCGGGACCCAACGTCCTTACTGGCACACCGTCTCGTGTCTACCCCCTTCGGGGAACAGCCTCCTTGCTGACACATCGCCCGGTGTTTGGCTTTGATATCATTTGTAAGGGTCAAGCCTACCTGTAGCCGATATTGTTCTCAGGGTCAAGCCTACCTGTAGCCGATATTGTTCTCTTTGGGCTTTCCCTTTTGGGCTTTCCCTTTCGGGCTTTTCCTCAAGGTTTTTAAAACGCATCTCCTAAGGATAGGTTTCCATACTCTTATAAAGGGTGTTTCGTTCTCCTCCCCAAACGGTACGAGATCTCACATTTTCTATCTGGTGAGTGCAGGTTTTTCTATGCATCTAGTGCTTGCATTTACCCTGAATTTAAGCAATTGGAAACTAATGTGAGCTTGAAAGAGTCAGATGCTTGGCCTGCTGAGGTACATATTTGCTTCTATGTTACCGACTAAGAAACGAAACTACGGTTAGCTATGTGGTTATTAAAACCGTGTTAACGATTGTTTCGTAGCCTCAAGATGCTTATGGCTTGGAGAAGCTTGCGACGGAGGAGTTGTGCAAGCATTACAACAAGGATTTCAGTATCGAGTGCCGAATTGGGAGGTTCCATAACATTTATGGTCCGTTTGGAACGTGGAAAGGTCGACCCGAATGCTCAAAATAGTTGTTTTCACATCGACGAATTGTATGAAATGACTAATGATATCGTTTTGTTCATGATAGGTGGAAGGGAAAAGGCTCCTGCTGCATTTTGTAGGAAGGCCCTCACTTCTGTAGATAAGTTTGAGATGTGGGGAGATGGTCTTCAGACAAGATCTTTCACCTTCATTGATGAATGTGTAGAAGGTGTTCTTCGGTAA

mRNA sequence

ATGGGGAGCGCTGGAGAAACGAATTACGGTTCATACACATATCAAGAGCTTGAAAGAGAGCCATATTGGCCATCGGAGAATCTAAGAATCTCGATCACCGGCGCCGGTGGCTTTATTGCCTCTCATATTGCTAGGCGTTTGAAGAATGAAGGCCATTACATTATTGCTTCTGATTGGAAAAGGAATGAACACATGACAGAAGATATGTTCTGCAATGAATTTCATCTTGTTGATCTTAGAGTGATGGATAATTGCTTGAAGGTCACAAAGAATGTTGACCATGTCTTTAACTTGGCTGCTGACATGGGTGGAATGGGCTTCATTCAATCCAATCACTCTGTTATTATGTATAATAACACCATGATTAGCTTCAACATGCTTGAAGCTGCAAGAATCAATGGTGTTAAGAGCTTGAAAGAGTCAGATGCTTGGCCTGCTGAGCCTCAAGATGCTTATGGCTTGGAGAAGCTTGCGACGGAGGAGTTGTGCAAGCATTACAACAAGGATTTCAGTATCGAGTGCCGAATTGGGAGGTTCCATAACATTTATGGTCCGTTTGGAACGTGGAAAGGTGGAAGGGAAAAGGCTCCTGCTGCATTTTGTAGGAAGGCCCTCACTTCTGTAGATAAGTTTGAGATGTGGGGAGATGGTCTTCAGACAAGATCTTTCACCTTCATTGATGAATGTGTAGAAGGTGTTCTTCGGTAA

Coding sequence (CDS)

ATGGGGAGCGCTGGAGAAACGAATTACGGTTCATACACATATCAAGAGCTTGAAAGAGAGCCATATTGGCCATCGGAGAATCTAAGAATCTCGATCACCGGCGCCGGTGGCTTTATTGCCTCTCATATTGCTAGGCGTTTGAAGAATGAAGGCCATTACATTATTGCTTCTGATTGGAAAAGGAATGAACACATGACAGAAGATATGTTCTGCAATGAATTTCATCTTGTTGATCTTAGAGTGATGGATAATTGCTTGAAGGTCACAAAGAATGTTGACCATGTCTTTAACTTGGCTGCTGACATGGGTGGAATGGGCTTCATTCAATCCAATCACTCTGTTATTATGTATAATAACACCATGATTAGCTTCAACATGCTTGAAGCTGCAAGAATCAATGGTGTTAAGAGCTTGAAAGAGTCAGATGCTTGGCCTGCTGAGCCTCAAGATGCTTATGGCTTGGAGAAGCTTGCGACGGAGGAGTTGTGCAAGCATTACAACAAGGATTTCAGTATCGAGTGCCGAATTGGGAGGTTCCATAACATTTATGGTCCGTTTGGAACGTGGAAAGGTGGAAGGGAAAAGGCTCCTGCTGCATTTTGTAGGAAGGCCCTCACTTCTGTAGATAAGTTTGAGATGTGGGGAGATGGTCTTCAGACAAGATCTTTCACCTTCATTGATGAATGTGTAGAAGGTGTTCTTCGGTAA

Protein sequence

MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWKRNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQTRSFTFIDECVEGVLR

Homology

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BLAST of Cp4.1LG07g09570 vs. Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 3.4e-126
Identity = 213/257 (82.88%), Postives = 227/257 (88.33%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MG+   T+YG+YTY+ELERE YWPSENL+ISITGAGGFIASHIARRLK+EGHY+IASDWK
Sbjct: 1   MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVM+NCLKVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK----------------------SLKESDAWPAEPQDAYGLEKLA 180
           MISFNM+EAARING+K                      SLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180

Query: 181 TEELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGL 236
           TEELCKHYNKDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA TS D+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240

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BLAST of Cp4.1LG07g09570 vs. Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 5.5e-124
Identity = 215/258 (83.33%), Postives = 223/258 (86.43%), Query Frame = 1


Query: 1   MGSAGE--TNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASD 60
           MGS+ +  T YG YTY ELERE YWPSE LRISITGAGGFI SHIARRLK+EGHYIIASD
Sbjct: 1   MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD 60

Query: 61  WKRNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYN 120
           WK+NEHMTEDMFC+EFHLVDLRVMDNCLKVT +VDHVFNLAADMGGMGFIQSNHSVIMYN
Sbjct: 61  WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYN 120

Query: 121 NTMISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKL 180
           NTMISFNMLEAARINGVK                     SLKESDAWPAEPQDAYGLEKL
Sbjct: 121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 180

Query: 181 ATEELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDG 236
           ATEELCKHY KDF IECR+GRFHNIYGPFGTWKGGREKAPAAFCRKA TS D+FEMWGDG
Sbjct: 181 ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 240

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BLAST of Cp4.1LG07g09570 vs. Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 7.2e-124
Identity = 215/258 (83.33%), Postives = 222/258 (86.05%), Query Frame = 1


Query: 1   MGSAGE--TNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASD 60
           MGS+ +  T YG YTY ELERE YWPSE LRISITGAGGFI SHIARRLK+EGHYIIASD
Sbjct: 1   MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD 60

Query: 61  WKRNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYN 120
           WK+NEHMTEDMFC+EFHLVDLRVMDNCLKVT  VDHVFNLAADMGGMGFIQSNHSVIMYN
Sbjct: 61  WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYN 120

Query: 121 NTMISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKL 180
           NTMISFNMLEAARINGVK                     SLKESDAWPAEPQDAYGLEKL
Sbjct: 121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 180

Query: 181 ATEELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDG 236
           ATEELCKHY KDF IECR+GRFHNIYGPFGTWKGGREKAPAAFCRKA TS D+FEMWGDG
Sbjct: 181 ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 240

[Close]

BLAST of Cp4.1LG07g09570 vs. Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 1.4e-122
Identity = 210/245 (85.71%), Postives = 216/245 (88.16%), Query Frame = 1


Query: 12  YTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWKRNEHMTEDMFC 71
           YTY ELE+EPYWP E LRISITGAGGFIASHIARRLK+EGHYIIASDWK+NEHMTEDMFC
Sbjct: 7   YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC 66

Query: 72  NEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR 131
           +EFHLVDLRVMDNCLKVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR
Sbjct: 67  HEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR 126

Query: 132 INGVK---------------------SLKESDAWPAEPQDAYGLEKLATEELCKHYNKDF 191
           INGVK                     SLKESDAWPAEPQDAYGLEKLATEELCKHY KDF
Sbjct: 127 INGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF 186

Query: 192 SIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQTRSFTFIDECV 236
            IECR+GRFHNIYGPFGTWKGGREKAPAAFCRKALTS D+FEMWGDGLQTRSFTFIDECV
Sbjct: 187 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECV 246

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BLAST of Cp4.1LG07g09570 vs. Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis (strain 168) GN=ytcB PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14
Identity = 67/232 (28.88%), Postives = 102/232 (43.97%), Query Frame = 1


Query: 28  LRISITGAGGFIASHIARRL-KNEGHYIIASDWKRNEHMTEDMFCNEFHLVDLR----VM 87
           ++I +TGA GFI SH+   L K++ H +I  D             N  +L+  +    + 
Sbjct: 1   MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60

Query: 88  DNCL-----KVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR------ 147
           +N L      + + VD +F+LAA  G      ++      +N      +LEA R      
Sbjct: 61  ENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQT 120

Query: 148 --------INGVKSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFSIECRIGRFHNIY 207
                   + G K  K S+     P   YG+ KL  E+LC  Y + F I   I RF  +Y
Sbjct: 121 FVFASTSSVYGEKQGKVSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVY 180

Query: 208 GPFGTWKGGREKAPAAFCR--KALTSVDKFEMWGDGLQTRSFTFIDECVEGV 234
           GP       R++   AF R  K         ++GDG Q+R FT+I +CV+G+
Sbjct: 181 GP-------RQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGI 225

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BLAST of Cp4.1LG07g09570 vs. TrEMBL
Match: A0A0A0LG80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011460 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 4.0e-129
Identity = 225/256 (87.89%), Postives = 230/256 (89.84%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGSAGET YGSYTYQELERE YWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSAGETTYGSYTYQELEREAYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNC+KVT+NVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCMKVTENVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHY KDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. TrEMBL
Match: A0A022QB14_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008367mg PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 2.2e-127
Identity = 221/256 (86.33%), Postives = 227/256 (88.67%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           M S+ ETNYGSYTY+ LEREPYWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MASSDETNYGSYTYETLEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFCNEFHLVDLRVMDNCLKVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCNEFHLVDLRVMDNCLKVTDGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNM+EAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMIEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHYNKDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRK+LTS DKFEMWGDGLQ
Sbjct: 181 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKSLTSTDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. TrEMBL
Match: S8CGN1_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_11033 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 2.2e-127
Identity = 218/256 (85.16%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGS GE+NYG+YT++ LER+PYWPSE LRISITGAGGFIASHIARRLK+EGHYI+ASDWK
Sbjct: 1   MGSTGESNYGAYTFENLERDPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIVASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNCLKVTK VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNM+EAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMIEAARINGVKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHYNKDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA+TS DKFEMWGDGLQ
Sbjct: 181 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. TrEMBL
Match: M9RZ20_CAMSI (GDP-mannose-3',5'-epimerase OS=Camellia sinensis GN=GME PE=2 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 3.7e-127
Identity = 218/256 (85.16%), Postives = 228/256 (89.06%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGS GE+NYG+YTY+ LEREPYWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSTGESNYGAYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNCLKVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEAAR+NGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARVNGVKRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHY KDF IECR+GRFHNIYGPFGTWKGGREKAPAAFCRKALTS+D+FEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSIDRFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. TrEMBL
Match: S4VIY9_9ROSA (GDP-D-mannose-3',5'-epimerase OS=Rosa roxburghii PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 4.8e-127
Identity = 220/256 (85.94%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGSAGE+ YG+YTY+ LEREPYWPSE LRISITGAGGFIASHIARRLKNEGHYIIASDWK
Sbjct: 1   MGSAGESGYGAYTYEALEREPYWPSEKLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHM+EDMFC+EFHLVDLRVMDNCLKVTK+VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMSEDMFCHEFHLVDLRVMDNCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEAARI+GVK                     SLKE+DAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARISGVKRLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHY KDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTS DKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. TAIR10
Match: AT5G28840.1 (AT5G28840.1 GDP-D-mannose 3',5'-epimerase)

HSP 1 Score: 452.2 bits (1162), Expect = 1.9e-127
Identity = 213/257 (82.88%), Postives = 227/257 (88.33%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MG+   T+YG+YTY+ELERE YWPSENL+ISITGAGGFIASHIARRLK+EGHY+IASDWK
Sbjct: 1   MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVM+NCLKVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK----------------------SLKESDAWPAEPQDAYGLEKLA 180
           MISFNM+EAARING+K                      SLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180

Query: 181 TEELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGL 236
           TEELCKHYNKDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA TS D+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240

[Close]

BLAST of Cp4.1LG07g09570 vs. TAIR10
Match: AT3G62830.1 (AT3G62830.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-15
Identity = 64/232 (27.59%), Postives = 102/232 (43.97%), Query Frame = 1


Query: 26  ENLRISITGAGGFIASHIARRLKNEGHYIIASD---WKRNEHMTEDMFCNEFHLVDLRVM 85
           + LR+ +TG  GF+ SH+  RL   G  +I  D     R E++        F ++   V+
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query: 86  DNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKSLKESD 145
           +  L     VD +++LA     + + + N    +  N + + NML  A+  G + L  S 
Sbjct: 177 EPILL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 236

Query: 146 A---------------W----PAEPQDAYGLEKLATEELCKHYNKDFSIECRIGRFHNIY 205
           +               W    P   +  Y   K   E L   Y++  ++E RI R  N Y
Sbjct: 237 SEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTY 296

Query: 206 GPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQTRSFTFIDECVEGVLR 236
           GP      GR    + F  +AL   +   ++GDG QTRSF F+ + VEG++R
Sbjct: 297 GPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMR 341

[Close]

BLAST of Cp4.1LG07g09570 vs. TAIR10
Match: AT2G47650.2 (AT2G47650.2 UDP-xylose synthase 4)

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-15
Identity = 64/230 (27.83%), Postives = 101/230 (43.91%), Query Frame = 1


Query: 28  LRISITGAGGFIASHIARRLKNEGHYIIASD---WKRNEHMTEDMFCNEFHLVDLRVMDN 87
           LR+ +TG  GF+ SH+  RL   G  +I  D     R E++        F ++   V++ 
Sbjct: 121 LRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRHDVVEP 180

Query: 88  CLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKSLKESDA- 147
            L     VD +++LA     + + + N    +  N + + NML  A+  G + L  S + 
Sbjct: 181 ILL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 240

Query: 148 --------------W----PAEPQDAYGLEKLATEELCKHYNKDFSIECRIGRFHNIYGP 207
                         W    P   +  Y   K   E L   Y++  ++E RI R  N YGP
Sbjct: 241 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGP 300

Query: 208 FGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQTRSFTFIDECVEGVLR 236
                 GR    + F  +AL   +   ++GDG QTRSF F+ + VEG++R
Sbjct: 301 RMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMR 343

[Close]

BLAST of Cp4.1LG07g09570 vs. TAIR10
Match: AT3G53520.4 (AT3G53520.4 UDP-glucuronic acid decarboxylase 1)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 60/231 (25.97%), Postives = 97/231 (41.99%), Query Frame = 1


Query: 26  ENLRISITGAGGFIASHIARRLKNEGHYIIASD---WKRNEHMTEDMFCNEFHLVDLRVM 85
           + LRI +TG  GF+ SH+  +L   G  +I  D     R E++        F L+   V+
Sbjct: 118 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVV 177

Query: 86  DNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKSLKESD 145
           +    +   VD +++LA     + +    ++     N M + NML  A+  G + L  S 
Sbjct: 178 E---PILLEVDQIYHLACPASPVHY---KYNPFYKTNVMGTLNMLGLAKRVGARFLLTST 237

Query: 146 A---------------W----PAEPQDAYGLEKLATEELCKHYNKDFSIECRIGRFHNIY 205
           +               W    P   +  Y   K   E L   Y++   +E RI R  N Y
Sbjct: 238 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTY 297

Query: 206 GPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQTRSFTFIDECVEGVL 235
           GP      GR    + F  + +       ++GDG QTRSF ++ + VEG++
Sbjct: 298 GPRMCLDDGR--VVSNFVAQTIRK-HPMTVYGDGKQTRSFQYVSDLVEGLV 339

[Close]

BLAST of Cp4.1LG07g09570 vs. TAIR10
Match: AT2G45310.1 (AT2G45310.1 UDP-D-glucuronate 4-epimerase 4)

HSP 1 Score: 68.9 bits (167), Expect = 4.6e-12
Identity = 60/242 (24.79%), Postives = 98/242 (40.50%), Query Frame = 1


Query: 25  SENLRISITGAGGFIASHIARRLKNEGHYIIASD------------WKRNEHMTEDMFCN 84
           +  + + +TGA GF+ +H++  LK  G  +I  D             +R       +F  
Sbjct: 94  NNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIV 153

Query: 85  EFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR- 144
           E  + D+ ++    K+  +  HV +LAA   G+ +   N S  +++N     N+LE  + 
Sbjct: 154 EGDINDVELLRKLFKIV-SFTHVMHLAA-QAGVRYAMENPSSYVHSNIAGFVNLLEICKS 213

Query: 145 -----------------INGVKSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFSIEC 204
                            +N      E D    +P   Y   K A EE+   YN  + +  
Sbjct: 214 VNPQPAIVWASSSSVYGLNTKVPFSEKDK-TDQPASLYAATKKAGEEIAHTYNHIYGLSL 273

Query: 205 RIGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSVDKFEMWGDGLQTRSFTFIDECVEG 235
              RF  +YGP+G      + A   F +  L   S+  FE    G   R FT+ID+ V+G
Sbjct: 274 TGLRFFTVYGPWGR----PDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKG 328

[Close]

BLAST of Cp4.1LG07g09570 vs. NCBI nr
Match: gi|449442927|ref|XP_004139232.1| (PREDICTED: GDP-mannose 3,5-epimerase 1 [Cucumis sativus])

HSP 1 Score: 468.8 bits (1205), Expect = 5.7e-129
Identity = 225/256 (87.89%), Postives = 230/256 (89.84%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGSAGET YGSYTYQELERE YWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSAGETTYGSYTYQELEREAYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNC+KVT+NVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCMKVTENVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHY KDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. NCBI nr
Match: gi|659070625|ref|XP_008455923.1| (PREDICTED: GDP-mannose 3,5-epimerase 2 isoform X1 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-128
Identity = 225/256 (87.89%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGSAGET YGSYTYQELERE YWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 9   MGSAGETTYGSYTYQELEREAYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 68

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNCLKVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 69  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTEKVDHVFNLAADMGGMGFIQSNHSVIMYNNT 128

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 129 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 188

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHY KDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ
Sbjct: 189 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 248

[Close]

BLAST of Cp4.1LG07g09570 vs. NCBI nr
Match: gi|659070627|ref|XP_008455931.1| (PREDICTED: GDP-mannose 3,5-epimerase 2 isoform X2 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-128
Identity = 225/256 (87.89%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGSAGET YGSYTYQELERE YWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSAGETTYGSYTYQELEREAYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNCLKVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTEKVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHY KDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. NCBI nr
Match: gi|747087107|ref|XP_011091083.1| (PREDICTED: GDP-mannose 3,5-epimerase 2-like [Sesamum indicum])

HSP 1 Score: 466.8 bits (1200), Expect = 2.2e-128
Identity = 222/256 (86.72%), Postives = 228/256 (89.06%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGS G TNYG+YTY+ LEREPYWPSE LRISITGAGGFIASHIARRLKNEGHYIIASDWK
Sbjct: 1   MGSTGGTNYGAYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNCLKVTK VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNM+EAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMIEAARINGVKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHYNKDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA+TS DKFEMWGDGLQ
Sbjct: 181 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 240

[Close]

BLAST of Cp4.1LG07g09570 vs. NCBI nr
Match: gi|747054528|ref|XP_011073474.1| (PREDICTED: GDP-mannose 3,5-epimerase 2 [Sesamum indicum])

HSP 1 Score: 465.3 bits (1196), Expect = 6.3e-128
Identity = 220/256 (85.94%), Postives = 229/256 (89.45%), Query Frame = 1


Query: 1   MGSAGETNYGSYTYQELEREPYWPSENLRISITGAGGFIASHIARRLKNEGHYIIASDWK 60
           MGS G+TNYG+YTY+ L+REPYWPSE LRISITGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1   MGSTGDTNYGAYTYENLDREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60

Query: 61  RNEHMTEDMFCNEFHLVDLRVMDNCLKVTKNVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
           +NEHMTEDMFC+EFHLVDLRVMDNCLKVTK VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61  KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120

Query: 121 MISFNMLEAARINGVK---------------------SLKESDAWPAEPQDAYGLEKLAT 180
           MISFNM+EAARINGVK                     SLKESDAWPAEPQDAYGLEKLAT
Sbjct: 121 MISFNMIEAARINGVKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLAT 180

Query: 181 EELCKHYNKDFSIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 236
           EELCKHYNKDF IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA+TS DKFEMWGDGLQ
Sbjct: 181 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g09570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GME_ARATH	3.4e-126	82.88	GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1	[more]
GME1_ORYSI	5.5e-124	83.33	GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=...	[more]
GME1_ORYSJ	7.2e-124	83.33	GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1	[more]
GME2_ORYSJ	1.4e-122	85.71	GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2	[more]
YTCB_BACSU	2.1e-14	28.88	Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis (strain 168) GN=...	[more]

BLAST of Cp4.1LG07g09570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG80_CUCSA	4.0e-129	87.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011460 PE=4 SV=1	[more]
A0A022QB14_ERYGU	2.2e-127	86.33	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008367mg PE=4 SV=1	[more]
S8CGN1_9LAMI	2.2e-127	85.16	Uncharacterized protein OS=Genlisea aurea GN=M569_11033 PE=4 SV=1	[more]
M9RZ20_CAMSI	3.7e-127	85.16	GDP-mannose-3',5'-epimerase OS=Camellia sinensis GN=GME PE=2 SV=1	[more]
S4VIY9_9ROSA	4.8e-127	85.94	GDP-D-mannose-3',5'-epimerase OS=Rosa roxburghii PE=2 SV=1	[more]

BLAST of Cp4.1LG07g09570 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28840.1	1.9e-127	82.88	GDP-D-mannose 3',5'-epimerase	[more]
AT3G62830.1	4.5e-15	27.59	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47650.2	7.6e-15	27.83	UDP-xylose synthase 4	[more]
AT3G53520.4	1.9e-13	25.97	UDP-glucuronic acid decarboxylase 1	[more]
AT2G45310.1	4.6e-12	24.79	UDP-D-glucuronate 4-epimerase 4	[more]

BLAST of Cp4.1LG07g09570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442927\|ref\|XP_004139232.1\|	5.7e-129	87.89	PREDICTED: GDP-mannose 3,5-epimerase 1 [Cucumis sativus]	[more]
gi\|659070625\|ref\|XP_008455923.1\|	1.7e-128	87.89	PREDICTED: GDP-mannose 3,5-epimerase 2 isoform X1 [Cucumis melo]	[more]
gi\|659070627\|ref\|XP_008455931.1\|	1.7e-128	87.89	PREDICTED: GDP-mannose 3,5-epimerase 2 isoform X2 [Cucumis melo]	[more]
gi\|747087107\|ref\|XP_011091083.1\|	2.2e-128	86.72	PREDICTED: GDP-mannose 3,5-epimerase 2-like [Sesamum indicum]	[more]
gi\|747054528\|ref\|XP_011073474.1\|	6.3e-128	85.94	PREDICTED: GDP-mannose 3,5-epimerase 2 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0050662	coenzyme binding
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR001509	Epimerase_deHydtase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0047918	GDP-mannose 3,5-epimerase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0001104	RNA polymerase II transcription cofactor activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g09570.1	Cp4.1LG07g09570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain	PFAM	PF01370	Epimerase	coord: 30..234 score: 2.9
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 29..233 score: 1.2
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 23..234 score: 4.38
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 29..235 score: 6.0E
None	No IPR available	PANTHER	PTHR10366:SF327	GDP-MANNOSE 3,5-EPIMERASE	coord: 29..235 score: 6.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g09570	Cucsa.133300	Cucumber (Gy14) v1	cgycpeB0356
Cp4.1LG07g09570	CmaCh12G011200	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g09570	CmaCh05G011980	Cucurbita maxima (Rimu)	cmacpeB789
Cp4.1LG07g09570	CmoCh05G012210	Cucurbita moschata (Rifu)	cmocpeB742
Cp4.1LG07g09570	CmoCh12G011390	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g09570	Cla019810	Watermelon (97103) v1	cpewmB806
Cp4.1LG07g09570	Csa2G011460	Cucumber (Chinese Long) v2	cpecuB820
Cp4.1LG07g09570	MELO3C004377	Melon (DHL92) v3.5.1	cpemeB771
Cp4.1LG07g09570	ClCG02G016600	Watermelon (Charleston Gray)	cpewcgB733
Cp4.1LG07g09570	CSPI02G03030	Wild cucumber (PI 183967)	cpecpiB821
Cp4.1LG07g09570	Lsi11G004510	Bottle gourd (USVL1VR-Ls)	cpelsiB659
Cp4.1LG07g09570	MELO3C004377.2	Melon (DHL92) v3.6.1	cpemedB907
Cp4.1LG07g09570	CsaV3_2G004170	Cucumber (Chinese Long) v3	cpecucB1014
Cp4.1LG07g09570	Bhi06G001516	Wax gourd	cpewgoB1006
Cp4.1LG07g09570	CsGy2G003140	Cucumber (Gy14) v2	cgybcpeB271
Cp4.1LG07g09570	Carg17594	Silver-seed gourd	carcpeB1006
Cp4.1LG07g09570	Carg23448	Silver-seed gourd	carcpeB0411

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g09570	Cp4.1LG00g04090	Cucurbita pepo (Zucchini)	cpecpeB016
Cp4.1LG07g09570	Cp4.1LG11g09780	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g09570	Cucurbita pepo (Zucchini)	cpecpeB015
Cp4.1LG07g09570	Cucurbita pepo (Zucchini)	cpecpeB504
Cp4.1LG07g09570	Cucurbita maxima (Rimu)	cmacpeB164