Cp4.1LG07g09250 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g09250
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tetratricopeptide repeat protein 35
Location	Cp4.1LG07 : 8445967 .. 8449916 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCCATGGATTTTTTAGTGGGCACCAACAAGGAGAAAGATCTTAGTTTGGATGAGCAAATCCTAATTGATTTGATCAGACCCATAAAATGAAAAAATCCGCCCCATTTGATTGGATGAGACCCACAAATCCAAAATCAAAATCCAAATTCCAAAACCCAAAACCAAACAGATCCGACCCATTTTCCATTTTGGCGATCCAAGTCAAATTCCCTCTCTCTCTTCCCTCCATTGCACCTAGTAGATCCAATCAGCCGGCCGGCGAGGGAACTGGGCCGACAACGTCTGTACTTAACTGCAAATTCTTTGTAATTCTCGATCCGATTTTCTCGGCCACTCTCTGAATTTCGCGAAGATGGTGAGTAAAGCAGAGGAGGCCGAGTTGAATAGACTCGAGACTCAGGTCGATAATGGAGGTGGAGGTGCTTGGGAGTATCTTTGCCTTGTCAGGAAGCTCAAGGTTCGCCGTTCTGATAAGGTCTTAAATCATGGATTATCGATCTTGAATGATTCCCGGAAGCGATCCGGTCTCGGCCACGAGGGTGAGTTTTAGCCTGTTTGTTGATTCTTCGATCTGGATTTGAAGATATGATCTCTTCTAGATTCAGTTGTTTTGTAATGCTTGGATTTTGGAGAAATCAATTCGGTTTGGATCATTGTCATTTAGATTCAAGTTAATTGAGGTTTCTTTGTTTATTCCAATTTGAATTCAGTGGTGGAGCTTTGTGCATCATGCTCTGTGATTTCGTTTTGGTTTCCTGTATTCTGGTTCCGGCTGAATTTGTAGATTATGATGTGAAAAATTGCAGCTCAAATGATGATAGCTTTAAGAACAGGAGCTTAAATAGTTGGATGGACTAACAGTGGTTTCATTGTCGAATGGTTCATTAGAAAAAACCTTGAATATGAGTTTTTCTTCGTTAACTGTGTGCTAACCTAGATCCCACAAAGGGTGTTGGTTGATTAAGACAGCAGGACGGAGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCAAAAATGGATAGCGCGGAAGTGCACGACCTATACCCGGCCGTCGGGGCAAGTGCTAGGCCTCGATGAGTAGGAGGGCGCGGTGGTCGCTGCAAAATCTTGGGCTGAGCGGCCATCGGTGCAGATTTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGATTCCATGTGAACGGCACTTGCACATGGGTTAGTGGCTCGGAAAGCACCTAAAAAATCACCCCATTCATCCAAAAGAGAAGGGGCCTATGTATTTGCATCAACCCTGTAGATTTGACTCTATCTACACTTGGAGCCAGTCCCCTATCGGTCCTACCACCATGCCGCAAAACGGGAGATCATGTGGAACCTTTTCTTTCTGGCATAACTGCGGTGAAACATAACAAACTCCTTCGATGTTCAGCTTACTTTTTCGATTAGGAACTCTTAGTCAAGATCGATTTTGTGTTTGGGGGAAAGAGAAAACGAGGGGAGCCACTAAGCTTGTCCTTGTTTGGTCACAAGGATAATGGTTCTTTTGAATATATGGATTAAAATTCTTNAGCTCAAGGTTCGCCGTTCTGATAAGGTCTTAAATCATGGATTATCGATCTTGAATGATTCCCGGAAGCGATCCGGTCTCGGCCACGAGGGTGAGTTTTAGCCTGTTTGTTGATTCTTCGATCTGGATTTGAAGATATGATCTCTTCTAGATTCAGTTGTTTTGTAATGCTTGGATTTTGGAGAAATCAATTCGGTTTGGATCATTGTCATTTAGATTCAAGTTAATTGAGGTTTCTTTGTTTATTCCAATTTGAATTCAGTGGTGGAGCTTTGTGCATCATGCTCTGTGATTTCGTTTTGGTTTCCTGTATTCTGGTTCCGGCTGAATTTGTAGATTATGATGTGAAAAATTGCAGCTCAAATGATGATAGCTTTAAGAACAGGAGCTTAAATAGTTGGATGGACTAACAGTGGTTTCATTGTCGAATGGTTCATTAGAAAAAACCTTGAATATGAGTTTTTCTTCGTTAACTGTGTGCTAACCTAGATCCCACAAAGGGTGTTGGTTGATTAAGACAGCAGGACGGAGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCAAAAATGGATAGCGCGGAAGTGCACGACCTATACCCGGCCGTCGGGGCAAGTGCTAGGCCTCGATGAGTAGGAGGGCGCGGTGGTCGCTGCAAAATCTTGGGCTGAGCGGCCATCGGTGCAGATTTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGATTCCATGTGAACGGCACTTGCACATGGGTTAGTGGCTCGGAAAGCACCTAAAAAATCACCCCATTCATCCAAAAGAGAAGGGGCCTATGTATTTGCATCAACCCTGTAGATTTGACTCTATCTACACTTGGAGCCAGTCCCCTATCGGTCCTACCACCATGCCGCAAAACGGGAGATCATGTGGAACCTTTTCTTTCTGGCATAACTGCGGTGAAACATAACAAACTCCTTCGATGTTCAGCTTACTTTTTCGATTAGGAACTCTTAGTCAAGATCGATTTTGTGTTTGGGGGAAAGAGAAAACGAGGGGAGCCACTAAGCTTGTCCTTGTTTGGTCACAAGGATAATGGTTCTTTTGAATATATGGATTAAAATTCTTCTTTACTCTCTCTTTTCTTTTTGTTATTGTTGACTTGTTGTATAGTATAATAGAAGATTTATCATTAGAAATCTTCCATCCTTATGACTCGAAATTTTAGTGAAAATTTCTTCCTGATTATGATCTGTTGGTTGGTGTAGAATGGACCCTGTACGAACAGGTAGCTATTGCAGCACTGGACTGCCAAGCTATAGACGTTGCAAAGGTGCAATTTACGCTTCGTTAGTTAACTACTCGAATTACAGAGTTGTTTAGCAAATTTTAATCTGTCATTTGTTGACTTTTGGTTTCGAGAATTTTATGCTTTGGACTGATGAACGCCTTACACTCCGCAATATTTTGTAGGATTGCATAAAGGTTCTTCAGAAGAAGTTTCCACAGAGTAAAAGAGTTGGTATGTTAAAAATAATTTTATTGTATTCTGATACGGTATTCTTGTTCAATTTTGTAACTGAGGTTGACCCTATGTTTCATGTTCGTATCTGATAATTCTTTTTTATGGGAAACAATGAAAACAAATAAAGATTAAAAGAGGAACCCTTAGGGATGAGGAATCCCTCAGCCTGAAATGGAGGATCAAAAAATAAAAGGCGTCCAATCTCGATTGATGAAAATNTTCCAATTTGAATTCAGTGGTGGAGCTTTGTGCATCATGCTCTGTGATTTCGTTTTGGTTTCCTGTATTCTGGTTCCGGCTGAATTTGTAGATTATGATGTGAAAAATTGCAGCTCAAATGATGATAGCTTTAAGAACAGGAGCTTAAATAGTTGGATGGACTAACAGTGGTTTCATTGTCGAATGGTTCATTAGAAAAAACCTTGAATATGAGTTTTTCTTCGTTAACTGTGTGCTAACCTAGATCCCACAAAGGGTGTTGGTTGATTAAGACAGCAGGACGGAGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCAAAAATGGATAGCGCGGAAGTGCACGACCTATACCCGGCCGTCGGGGCAAGTGCTAGGCCTCGATGAGTAGGAGGGCGCGGTGGTCGCTGCAAAATCTTGGGCTGAGCGGCCATCGGTGCAGATTTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGATTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGA

mRNA sequence

TAGCCATGGATTTTTTAGTGGGCACCAACAAGGAGAAAGATCTTAGTTTGGATGAGCAAATCCTAATTGATTTGATCAGACCCATAAAATGAAAAAATCCGCCCCATTTGATTGGATGAGACCCACAAATCCAAAATCAAAATCCAAATTCCAAAACCCAAAACCAAACAGATCCGACCCATTTTCCATTTTGGCGATCCAAGTCAAATTCCCTCTCTCTCTTCCCTCCATTGCACCTAGTAGATCCAATCAGCCGGCCGGCGAGGGAACTGGGCCGACAACGTCTGTACTTAACTGCAAATTCTTTGTAATTCTCGATCCGATTTTCTCGGCCACTCTCTGAATTTCGCGAAGATGGTGAGTAAAGCAGAGGAGGCCGAGTTGAATAGACTCGAGACTCAGGTCGATAATGGAGGTGGAGGTGCTTGGGAGTATCTTTGCCTTGTCAGGAAGCTCAAGGTTCGCCGTTCTGATAAGGTCTTAAATCATGGATTATCGATCTTGAATGATTCCCGGAAGCGATCCGGTCTCGGCCACGAGGAATGGACCCTGTACGAACAGGTAGCTATTGCAGCACTGGACTGCCAAGCTATAGACGTTGCAAAGGTGCAATTTACGCTTCGATTGCATAAAGGTTCTTCAGAAGAAGTTTCCACAGAGTAAAAGAGTTGGTATGTTAAAAATAATTTTATTGTATTCTGATACGGTATTCTTGTTCAATTTTGTAACTGAGGTTGACCCTATGTTTCATGTTCGTATCTGATAATTCTTTTTTATGGGAAACAATGAAAACAAATAAAGATTAAAAGAGGAACCCTTAGGGATGAGGAATCCCTCAGCCTGAAATGGAGGATCAAAAAATAAAAGGCGTCCAATCTCGATTGATGAAAATNTTCCAATTTGAATTCAGTGGTGGAGCTTTGTGCATCATGCTCTGTGATTTCGTTTTGGTTTCCTGTATTCTGGTTCCGGCTGAATTTGTAGATTATGATGTGAAAAATTGCAGCTCAAATGATGATAGCTTTAAGAACAGGAGCTTAAATAGTTGGATGGACTAACAGTGGTTTCATTGTCGAATGGTTCATTAGAAAAAACCTTGAATATGAGTTTTTCTTCGTTAACTGTGTGCTAACCTAGATCCCACAAAGGGTGTTGGTTGATTAAGACAGCAGGACGGAGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCAAAAATGGATAGCGCGGAAGTGCACGACCTATACCCGGCCGTCGGGGCAAGTGCTAGGCCTCGATGAGTAGGAGGGCGCGGTGGTCGCTGCAAAATCTTGGGCTGAGCGGCCATCGGTGCAGATTTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGATTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGA

Coding sequence (CDS)

ATGGTGAGTAAAGCAGAGGAGGCCGAGTTGAATAGACTCGAGACTCAGGTCGATAATGGAGGTGGAGGTGCTTGGGAGTATCTTTGCCTTGTCAGGAAGCTCAAGGTTCGCCGTTCTGATAAGGTCTTAAATCATGGATTATCGATCTTGAATGATTCCCGGAAGCGATCCGGTCTCGGCCACGAGGAATGGACCCTGTACGAACAGGTAGCTATTGCAGCACTGGACTGCCAAGCTATAGACGTTGCAAAGGTGCAATTTACGCTTCGATTGCATAAAGGTTCTTCAGAAGAAGTTTCCACAGAGTAA

Protein sequence

MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLGHEEWTLYEQVAIAALDCQAIDVAKVQFTLRLHKGSSEEVSTE

Homology

[Close]

BLAST of Cp4.1LG07g09250 vs. TrEMBL
Match: A0A0A0LFJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011580 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-37
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MVSKAEEAELNRLETQVDNGGGGAW+YLCL+RKLKVRRS KVLN+GLSILNDSRKRSGLG
Sbjct: 1  MVSKAEEAELNRLETQVDNGGGGAWDYLCLIRKLKVRRSHKVLNYGLSILNDSRKRSGLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYEQVAIAALDCQAIDVAK
Sbjct: 61 QEEWTLYEQVAIAALDCQAIDVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. TrEMBL
Match: B9MZF5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s05290g PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-34
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K+EE ELNRLE+QVDNGGGGAWEYLCLVRKLKVRRSDKVL HGLSILNDS+KRS LG
Sbjct: 1  MVTKSEETELNRLESQVDNGGGGAWEYLCLVRKLKVRRSDKVLKHGLSILNDSKKRSSLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYE+VAIAA+DCQ+++VAK
Sbjct: 61 SEEWTLYEEVAIAAMDCQSLEVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. TrEMBL
Match: D7TUM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01820 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.1e-34
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K EE ELNRLE QVDNGGGGAWEYLCLVRKLKVRRSDKVL HGLSILND +KRS LG
Sbjct: 1  MVTKTEETELNRLEIQVDNGGGGAWEYLCLVRKLKVRRSDKVLKHGLSILNDPKKRSNLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYEQVA+AA+DCQ +DVAK
Sbjct: 61 PEEWTLYEQVAVAAMDCQCLDVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. TrEMBL
Match: A0A061F258_THECC (Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_026387 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-33
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MVSK EE +LNRLE QVDNGGGGAWEYLCLVRKLKVRRS+KVL HGLSILND +KRS LG
Sbjct: 1  MVSKTEETQLNRLENQVDNGGGGAWEYLCLVRKLKVRRSEKVLKHGLSILNDPKKRSALG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYEQVAIAA+DCQ +DVAK
Sbjct: 61 PEEWTLYEQVAIAAMDCQCLDVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. TrEMBL
Match: M5VZE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009192mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-33
Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MVSK EE +LNRLE QVDNGGGGAWEYLCLVRKLKVRRS+KVL HGLSILND +KRS LG
Sbjct: 1  MVSKTEETQLNRLENQVDNGGGGAWEYLCLVRKLKVRRSEKVLKHGLSILNDIKKRSSLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           +EWTLYEQVAIAA+DCQ +DVAK
Sbjct: 61 PDEWTLYEQVAIAAMDCQCLDVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. TAIR10
Match: AT3G04830.1 (AT3G04830.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 7.8e-33
Identity = 64/84 (76.19%), Postives = 74/84 (88.10%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K EE +LN+LE QV+NGGGG WEYLCLVRKLKVRRS+ VL HGLSILNDS KRS LG
Sbjct: 1  MVTKTEEIQLNQLENQVENGGGGVWEYLCLVRKLKVRRSEIVLKHGLSILNDSGKRSALG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           +EWTLYEQVAIAA+DCQ++ VA+
Sbjct: 61 PDEWTLYEQVAIAAMDCQSLGVAQ 84

[Close]

BLAST of Cp4.1LG07g09250 vs. TAIR10
Match: AT5G28220.1 (AT5G28220.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-31
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K EE +LN+LE QVDNGGGG WEYLCLVR LKVRRS+KVL HG SILND +KRS LG
Sbjct: 14 MVTKTEEKQLNQLEIQVDNGGGGTWEYLCLVRNLKVRRSEKVLKHGSSILNDQKKRSALG 73

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           +EWTL EQVAIAA+DCQ + VA+
Sbjct: 74 PDEWTLNEQVAIAAMDCQCLGVAQ 97

[Close]

BLAST of Cp4.1LG07g09250 vs. NCBI nr
Match: gi|449442911|ref|XP_004139224.1| (PREDICTED: ER membrane protein complex subunit 2 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-37
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MVSKAEEAELNRLETQVDNGGGGAW+YLCL+RKLKVRRS KVLN+GLSILNDSRKRSGLG
Sbjct: 1  MVSKAEEAELNRLETQVDNGGGGAWDYLCLIRKLKVRRSHKVLNYGLSILNDSRKRSGLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYEQVAIAALDCQAIDVAK
Sbjct: 61 QEEWTLYEQVAIAALDCQAIDVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. NCBI nr
Match: gi|659070601|ref|XP_008455808.1| (PREDICTED: ER membrane protein complex subunit 2 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 6.4e-37
Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MVSKAEEAELNRLETQVDNGGGGAW+YLCL+RKLKVRRS KVLN+GLSILNDSRKRSGLG
Sbjct: 1  MVSKAEEAELNRLETQVDNGGGGAWDYLCLIRKLKVRRSHKVLNYGLSILNDSRKRSGLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYEQV IAALDCQAIDVAK
Sbjct: 61 QEEWTLYEQVTIAALDCQAIDVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. NCBI nr
Match: gi|566169611|ref|XP_006382774.1| (hypothetical protein POPTR_0005s05290g [Populus trichocarpa])

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-34
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K+EE ELNRLE+QVDNGGGGAWEYLCLVRKLKVRRSDKVL HGLSILNDS+KRS LG
Sbjct: 1  MVTKSEETELNRLESQVDNGGGGAWEYLCLVRKLKVRRSDKVLKHGLSILNDSKKRSSLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYE+VAIAA+DCQ+++VAK
Sbjct: 61 SEEWTLYEEVAIAAMDCQSLEVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. NCBI nr
Match: gi|743866331|ref|XP_011032433.1| (PREDICTED: ER membrane protein complex subunit 2 [Populus euphratica])

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-34
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K+EE ELNRLE+QVDNGGGGAWEYLCLVRKLKVRRSDKVL HGLSILNDS+KRS LG
Sbjct: 1  MVTKSEETELNRLESQVDNGGGGAWEYLCLVRKLKVRRSDKVLKHGLSILNDSKKRSSLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYE+VAIAA+DCQ+++VAK
Sbjct: 61 SEEWTLYEEVAIAAMDCQSLEVAK 84

[Close]

BLAST of Cp4.1LG07g09250 vs. NCBI nr
Match: gi|225451281|ref|XP_002277809.1| (PREDICTED: ER membrane protein complex subunit 2 [Vitis vinifera])

HSP 1 Score: 151.4 bits (381), Expect = 8.7e-34
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MVSKAEEAELNRLETQVDNGGGGAWEYLCLVRKLKVRRSDKVLNHGLSILNDSRKRSGLG 60
          MV+K EE ELNRLE QVDNGGGGAWEYLCLVRKLKVRRSDKVL HGLSILND +KRS LG
Sbjct: 1  MVTKTEETELNRLEIQVDNGGGGAWEYLCLVRKLKVRRSDKVLKHGLSILNDPKKRSNLG 60

Query: 61 HEEWTLYEQVAIAALDCQAIDVAK 85
           EEWTLYEQVA+AA+DCQ +DVAK
Sbjct: 61 PEEWTLYEQVAVAAMDCQCLDVAK 84

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g09250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g09250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFJ7_CUCSA	1.5e-37	94.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011580 PE=4 SV=1	[more]
B9MZF5_POPTR	2.1e-34	84.52	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s05290g PE=4 SV=1	[more]
D7TUM1_VITVI	6.1e-34	84.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01820 PE=4 SV=...	[more]
A0A061F258_THECC	1.0e-33	84.52	Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_026387 PE=4 SV...	[more]
M5VZE2_PRUPE	3.0e-33	83.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009192mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g09250 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04830.1	7.8e-33	76.19	Protein prenylyltransferase superfamily protein	[more]
AT5G28220.1	1.1e-31	73.81	Protein prenylyltransferase superfamily protein	[more]

BLAST of Cp4.1LG07g09250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442911\|ref\|XP_004139224.1\|	2.2e-37	94.05	PREDICTED: ER membrane protein complex subunit 2 [Cucumis sativus]	[more]
gi\|659070601\|ref\|XP_008455808.1\|	6.4e-37	92.86	PREDICTED: ER membrane protein complex subunit 2 [Cucumis melo]	[more]
gi\|566169611\|ref\|XP_006382774.1\|	3.0e-34	84.52	hypothetical protein POPTR_0005s05290g [Populus trichocarpa]	[more]
gi\|743866331\|ref\|XP_011032433.1\|	3.0e-34	84.52	PREDICTED: ER membrane protein complex subunit 2 [Populus euphratica]	[more]
gi\|225451281\|ref\|XP_002277809.1\|	8.7e-34	84.52	PREDICTED: ER membrane protein complex subunit 2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g09250.1	Cp4.1LG07g09250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12760	TETRATRICOPEPTIDE REPEAT PROTEIN	coord: 2..87 score: 3.1
None	No IPR available	PANTHER	PTHR12760:SF0	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 2	coord: 2..87 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g09250	Cucsa.133410	Cucumber (Gy14) v1	cgycpeB0356
Cp4.1LG07g09250	CmaCh12G011100	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g09250	CmaCh05G011890	Cucurbita maxima (Rimu)	cmacpeB789
Cp4.1LG07g09250	CmoCh05G012130	Cucurbita moschata (Rifu)	cmocpeB742
Cp4.1LG07g09250	CmoCh12G011280	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g09250	Cla019821	Watermelon (97103) v1	cpewmB806
Cp4.1LG07g09250	Csa2G011580	Cucumber (Chinese Long) v2	cpecuB820
Cp4.1LG07g09250	MELO3C004366	Melon (DHL92) v3.5.1	cpemeB771
Cp4.1LG07g09250	ClCG02G016480	Watermelon (Charleston Gray)	cpewcgB733
Cp4.1LG07g09250	CSPI02G03150	Wild cucumber (PI 183967)	cpecpiB821
Cp4.1LG07g09250	Lsi11G004630	Bottle gourd (USVL1VR-Ls)	cpelsiB659
Cp4.1LG07g09250	MELO3C004366.2	Melon (DHL92) v3.6.1	cpemedB907
Cp4.1LG07g09250	CsaV3_2G004290	Cucumber (Chinese Long) v3	cpecucB1014
Cp4.1LG07g09250	Bhi06G001505	Wax gourd	cpewgoB1006
Cp4.1LG07g09250	CsGy2G003260	Cucumber (Gy14) v2	cgybcpeB271
Cp4.1LG07g09250	Carg17584	Silver-seed gourd	carcpeB1006
Cp4.1LG07g09250	Carg23439	Silver-seed gourd	carcpeB0411

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g09250	Cp4.1LG11g09730	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g09250	Cucurbita pepo (Zucchini)	cpecpeB504
Cp4.1LG07g09250	Cucurbita maxima (Rimu)	cmacpeB164
Cp4.1LG07g09250	Wax gourd	cpewgoB1072