Cp4.1LG07g09200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g09200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG07 : 8476000 .. 8476598 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATCCGCTCGCAAAAAGAAGCATTGGAAAGGCAGAAGAAAAAGCATAAAATAAAATAAAATAAAATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGCTGCATTGCAGGCTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGGTATGTTCTCTTCCTTTTTAAATTATTTTTATTTTCTCTTAATAATTGATTGATTGATTATTGTATTTGTTTCACAGATAAGCTACACATCAATGTGAAGAACTGAATAATGGAATGCAAAACAAAGAGGGCTCTTAACCTTCCAAGGATCTAACTAATAATTGTATTCAAGTTTAAGCTTGTAAGATGGGACTTTCATTTTCAATTAATAAAGTTCCTCTTTCATGCATCATTCATGATTTTTCTTTTTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAA

mRNA sequence

TCATCCGCTCGCAAAAAGAAGCATTGGAAAGGCAGAAGAAAAAGCATAAAATAAAATAAAATAAAATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGCTGCATTGCAGGCTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGATAAGCTACACATCAATGTGAAGAACTGAATAATGGAATGCAAAACAAAGAGGGCTCTTAACCTTCCAAGGATCTAACTAATAATTGTATTCAAGTTTAAGCTTGTAAGATGGGACTTTCATTTTCAATTAATAAAGTTCCTCTTTCATGCATCATTCATGATTTTTCTTTTTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAA

Coding sequence (CDS)

ATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGCTGCATTGCAGGCTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAGAAGCCGCTGATAAGCTACACATCAATGTGAAGAACTGA

Protein sequence

MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHINVKN
Homology
[Close]
BLAST of Cp4.1LG07g09200 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.8e-08
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 1 

Query: 38 EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL 80
          EA+++ CY+ C KEC +KGNG +FCE+KCD DC  K+  +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]
BLAST of Cp4.1LG07g09200 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-24
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 1 

Query: 3  KKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQSF 62
          KKM+ VLL+C+VV+AAL+ S      KE KYE+KF+AKY+ CYE CEKECLE G NGQSF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCGEKEAADKLHINVKN 86
          CEVKCDEDCGEKE+ADKLHIN  N
Sbjct: 64 CEVKCDEDCGEKESADKLHINPAN 87

[Close]
BLAST of Cp4.1LG07g09200 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-21
Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKM+AV L+C+VVV +LQ ++A +  + A YEAKF+AKY+ C+  CEKEC+E+G+G S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIN 83
          +CEVKCDEDCG KEAADKLHI+
Sbjct: 61 YCEVKCDEDCGAKEAADKLHIH 82

[Close]
BLAST of Cp4.1LG07g09200 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-21
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MA KMIA+ L+C+VVVAALQ ++A +    AKYEAKF+AKY+ C+E CEKECL  G+GQS
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKE-DVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHINV 84
          +CEVKCDEDC EKEAADKLHI +
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIEL 82

[Close]
BLAST of Cp4.1LG07g09200 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.9e-21
Identity = 58/84 (69.05%), Postives = 65/84 (77.38%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+AV L+C+VVVA LQ   A E     KYEAKF+AKY+ CYE CEKECL    NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCGEKEAADKLHINV 84
          SFCEVKCDEDC EKEAADKLHI +
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIEL 84

[Close]
BLAST of Cp4.1LG07g09200 vs. TrEMBL
Match: A0A0A0KFH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.9e-21
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+ VLL+C+V++A L+ S      KE KYE+KF+A+Y+ CYE CEKECL  G NGQ
Sbjct: 1  MAKKMMGVLLICIVIMAVLEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQ 60

Query: 61 SFCEVKCDEDCGEKEAADKLHINV 84
          S+CEVKCDEDC EKE ADKLH+ V
Sbjct: 61 SYCEVKCDEDCDEKEVADKLHVEV 84

[Close]
BLAST of Cp4.1LG07g09200 vs. NCBI nr
Match: gi|700191315|gb|KGN46519.1| (hypothetical protein Csa_6G106710 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-24
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 1 

Query: 3  KKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQSF 62
          KKM+ VLL+C+VV+AAL+ S      KE KYE+KF+AKY+ CYE CEKECLE G NGQSF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCGEKEAADKLHINVKN 86
          CEVKCDEDCGEKE+ADKLHIN  N
Sbjct: 64 CEVKCDEDCGEKESADKLHINPAN 87

[Close]
BLAST of Cp4.1LG07g09200 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-23
Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKMIA+ L+C+VVVAALQ +SA +  + AKYEAKF+AKY+ C++ CEKECLE G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHINV 84
          +CEVKCDEDC EKE ADKLHI +
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]
BLAST of Cp4.1LG07g09200 vs. NCBI nr
Match: gi|449445523|ref|XP_004140522.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21
Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MAKKM+AV L+C+VVV +LQ ++A +  + A YEAKF+AKY+ C+  CEKEC+E+G+G S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCGEKEAADKLHIN 83
          +CEVKCDEDCG KEAADKLHI+
Sbjct: 61 YCEVKCDEDCGAKEAADKLHIH 82

[Close]
BLAST of Cp4.1LG07g09200 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-21
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60
          MA KMIA+ L+C+VVVAALQ ++A +    AKYEAKF+AKY+ C+E CEKECL  G+GQS
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKE-DVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 FCEVKCDEDCGEKEAADKLHINV 84
          +CEVKCDEDC EKEAADKLHI +
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIEL 82

[Close]
BLAST of Cp4.1LG07g09200 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-21
Identity = 58/84 (69.05%), Postives = 65/84 (77.38%), Query Frame = 1 

Query: 1  MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQ 60
          MAKKM+AV L+C+VVVA LQ   A E     KYEAKF+AKY+ CYE CEKECL    NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCGEKEAADKLHINV 84
          SFCEVKCDEDC EKEAADKLHI +
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIEL 84

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g09200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALL6_OLEEU6.8e-0854.76Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1[more]
BLAST of Cp4.1LG07g09200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCI6_CUCSA4.7e-2471.43Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1[more]
A0A0A0KDP7_CUCSA1.3e-2164.63Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1[more]
A0A0A0KPA7_CUCSA1.7e-2168.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1[more]
A0A0A0K9Z9_CUCSA2.9e-2169.05Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KFH6_CUCSA2.9e-2164.29Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1[more]
BLAST of Cp4.1LG07g09200 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g09200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191315|gb|KGN46519.1|6.8e-2471.43hypothetical protein Csa_6G106710 [Cucumis sativus][more]
gi|659114221|ref|XP_008456958.1|1.2e-2369.88PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo][more]
gi|449445523|ref|XP_004140522.1|1.9e-2164.63PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus][more]
gi|449457470|ref|XP_004146471.1|2.4e-2168.67PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus][more]
gi|700191316|gb|KGN46520.1|4.1e-2169.05hypothetical protein Csa_6G106720 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015333Pollen_allergen_ole-e-6
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g09200.1Cp4.1LG07g09200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015333Pollen allergen ole e 6GENE3DG3DSA:1.10.287.720coord: 39..81
score: 4.3
IPR015333Pollen allergen ole e 6PFAMPF09253Ole-e-6coord: 44..80
score: 6.0
IPR015333Pollen allergen ole e 6unknownSSF111388Pollen allergen ole e 6coord: 38..79
score: 4.18
NoneNo IPR availablePANTHERPTHR35632FAMILY NOT NAMEDcoord: 1..81
score: 1.9
NoneNo IPR availablePANTHERPTHR35632:SF1SUBFAMILY NOT NAMEDcoord: 1..81
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g09200Silver-seed gourdcarcpeB0411
Cp4.1LG07g09200Silver-seed gourdcarcpeB1006
Cp4.1LG07g09200Cucumber (Chinese Long) v3cpecucB1014
Cp4.1LG07g09200Wax gourdcpewgoB1006
Cp4.1LG07g09200Wax gourdcpewgoB1072
Cp4.1LG07g09200Cucurbita pepo (Zucchini)cpecpeB139
Cp4.1LG07g09200Cucurbita pepo (Zucchini)cpecpeB504
Cp4.1LG07g09200Cucumber (Gy14) v1cgycpeB0356
Cp4.1LG07g09200Cucurbita maxima (Rimu)cmacpeB164
Cp4.1LG07g09200Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g09200Cucurbita maxima (Rimu)cmacpeB789
Cp4.1LG07g09200Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g09200Cucurbita moschata (Rifu)cmocpeB742
Cp4.1LG07g09200Wild cucumber (PI 183967)cpecpiB821
Cp4.1LG07g09200Cucumber (Chinese Long) v2cpecuB820
Cp4.1LG07g09200Bottle gourd (USVL1VR-Ls)cpelsiB659
Cp4.1LG07g09200Watermelon (Charleston Gray)cpewcgB733
Cp4.1LG07g09200Watermelon (97103) v1cpewmB806
Cp4.1LG07g09200Melon (DHL92) v3.5.1cpemeB771
Cp4.1LG07g09200Cucumber (Gy14) v2cgybcpeB271
Cp4.1LG07g09200Melon (DHL92) v3.6.1cpemedB907