Cp4.1LG07g07980 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g07980
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG07 : 7106236 .. 7110139 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGGATGAATCCGTGCAGCGGAGGCTTTGCTTCGACTGCTTTTCTGAAACTTACCCATTGCGTTTCTCAAGTTTCCATGGCACAAAAAATCATTCCATTTAACTTGTCTGAGCATCAGCTGTTCAAATCATGTCGCTACCACTCTTCAAATGATGATTCGGCCAATACCCTTCATGCCAAGATGGTAAAAAATGGTTCTATTTTGTATTTAGGAAAGTTCGTTATGAGTTCCTATGTGAAATCTGAGAAATTAGACGATGCACAGAAAGTGTTCGACGAAATGCCCCATAGAGATGTACTTTCATGGACGGTACTTATATCGGGTTTTGCTAGAGTAAATTGTTCTGAAATGGCATTGCAACTGTTTAGAGAAATGCTGGTTGATGGGGTTTGTCCAAATCATTTTACTTTGTCTTGTGTTCTTAAACTTTGTTCTAGAGTTGGTGATTTGCAAATGGGAAAGGGGATTCATGGATGGATTCTTAGAAGTGGGGTTAATTTAGATGTTGTCTTGGAGAATTCTATGCTTGATTTGTATGCAAAGTTTGATGCATTTGATTATACCAAACAATTGTTTGATTCAATGAAAGAAAAGAGTACTGCTACTTACAATATCATGCTTGGTGTGTATGTCCGTAGTTGTGATGTTAACAAATCTCTTGATTTATTCAGAAACTTGCCTTGCAGAGATACGGCGAGTTGGAATACGATTATATGTGGGCTAATGCAAGGTGGGTATCTGAATACAGCTATGGAGCTACTTTATGAGATGGTGAAGAACGAACCCGAGTTTAACGAAGTTACTTCTTCCATAGCTTTAAGTGTGGTTTCTTCTTTACTGATTATTGAGCTAGGTAGACAAGTACATGGCCGAATTTTCAGGTTCGGGCTTCATAGTGATGGATTTGTAAATAGTTCATTGATAAATATGTATGTTAAGTGTGGAAATTTGGAAAAAGCATCGGTTATATACAGTCAAATGCCTTCAAATTTTGGGAAGAGACAAGATTCGAACATTGTATGTAGCAACACGATGACAGAAATTGTTTCGCGGAGCTCAATAGTGTCTGGATATGTTCAAAATGGCAAGTATGAAGATTCCTTCAAAACTTTTGTTTCTATGGTCCGTGAACGAGCTGTGATGGACAGATTTACCATTGCAAGCATCATATCGGCGTGTTCTAATGCTGGCGTTTTAGAGCTTGGACGTCAAATCCATGCTTATATTCAGAAAACTGGGGAACAGCTTGATGCTCACCTAGCTTCCTCCTTGATTGACATGTACGCTAAAGGTGGGAGTTTGGATTGTGCCTATCAAATTTTTGAGCAAACGTCTTACTTAAATGTTGTGACATGGACTTCCATGATTACTGGATGTGCTTTGCACGGTCAAGGTAAGGAAGCCATTCGACTGTTTGAACAGATGAGATATGAGGGAATCATACCAAATGAGGTTACTTTTATAGGAGTTTTAACAGCTTGCAGTCATGCAGGGCTGCTCGATGAAGGCCGTCTATATTTTAACATGATGAAAGATGTTTATGCAATTGAGCCGAAGGTTGAGCATTTCACTTGTATGGTAGATCTTTACGGTCGAGCTGGATGCTTGAACGAAGTCAAAGAGTTCATCTACCAGAATGATTTATCACACCATAGTGCAGTTTGGAAGGCATTTCTATCGTCTTGTCGGCTTTACAAGGACATCGAAATGGGAAATTGGGTTTCTGAGAAGTTGTTTAAACTCGAACCACGAGATGAAGGGCCTTATGTTTTACTATCAAACATGTGCTCCAGCAATCAAAAGTGGGAAGAAGCTTCCAAAACAAGAAGATCTATGCAACACAGAGGGATTAGCAAAACACCTGGCCAATCTTGGATTCATGTGAAAAACCAAGTCCATTCTTTCGTTGCGGGAGATCGATCACACCGTCAACATGCTCAGATATATGCATATCTGAACAAACTCATTGGAAGATTGAAGGAAATTGGGTACTCGTGCGATGTAAAATTGGTGATGCAGGATGTTGAAGAAGAACAGGGTGAAGTGCTTCTTGGTTGGCATAGTGAAAAGCTTGCAGTTGCTTATGGCATTATCAATTTGGCTTCTGGCATTCCAATCCGCATCATGAAGAACCTTCGGGTATGTACTGATTGTCATAACTTTATGAAGCTAACATCTCAGCTTTTAGATAGGGAGATCATTGTTCGAGATATTCATCGTTTCCATCATTTTAACTCGGGTCGTTGTTCTTGTGGTGATTATTGGTGAGCTGAGATAGAGATTCTGATACATGTGAATTTTCATGCATAAAATTACTCTGCTTTGCTTAGAATCCTGTAGCATTGTTGGTGGAAACAAGGCAAATATCCATTAGAAGAAGCCGAAATCTTAACATTTTGCTTCTTGGCTTGCAAAAGCTTACCTGGTGGAATGATTCAGAACTTTCACCACTCTATTTTCCATTAATAAAAGATAGCGAATTGGCGATGCGCAATGGCTCAGTCTTACAAACCACCTCAACAGAGATTTAAAAACACGACACGTTTAATGGAGACGGATTGTTTACACCTTCAAATGTTGTCACGCATGGTAAGATTCAATGGTAGACTTTTGAGAATACTTTTGTGAGATCCCACATCAGTTGGAGAGGGGAACAAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACATACGTGTTTTAAAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACATATCTGCTAGCGGTAGGCTTGGACTGTTACAAATGGTATCAGAGGCAGACACCGAGCGGTGTGCCATCGAGGACGCTGGACCCCCAAGGAGGGTGGATTGTGAGATCCCACATCGGTTAGAGAGGGAAACAAAGAATTCCTTATAACGATGTGGAAACCTCTCCCTAACATACACGTTTTAAAACCTTGAGGGGAGCNTTGATGGGCTGAATCACTTGGTAAGTTGGCTGCAACAGTTTCAATAGGTTATTAACATGTGGAAGTGTTCTTCAAAGAAGTATAACATTTTTTTTAAAAGCAAACACACTTTTTACGAATGATTGAATTATGCTACTAATAACGACTATGAGATTGTCCACTTTGAGCGTAAGCTCTCATGGCTCTCATGGCTTTGTTTTGGGCTTCCCCAAAAAGCCTCATATCAATGGAGACGTAGTCCTTGCTTATAAACCCATGATCAACTCCTTAATTAGCCGATGTGGGACTCCTCTCCCAACAATACTCCCCTCGAACAAAGTACACCATAGAGCCTCCCTTGAGGCATATGGAGCACTCAAATAGCCTCCCTTTAACCGAGGCTCGACTCCTTCTCTAGAGCCCTCAAACAAAGTACACTCTTTGTTTGACATTTGAGGATTCTGTTGACATGGCTAAATTAAGAGTATGGCTCTAATACCATGTTAGGAATCACGGCTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTATGGGCTTCCCCAAAAGGCCTCGTACTAATGGAGATGTAGGTCCTAATAATTAGCTGACGTGTGACTCCTCTCCCAACAATCCTCAACAAATTCTTACTCAACTTGTAGAGATCTTTAAGTTAGTATCCCTTGAAAGAGTACGTTATATATATATATATATATATATCTCGAAAGCTGAAAAAGAGTGGAATTATGCATTGGGTTACCTTATCAGCTTGTATGGCTCTGATGGTGAAGGAGTGTGTTCTTGCAGGTACGCGTCGGAGCGGCGAGACGGAGAGGCCTTTGGGAGCGATCAAAGCTCTAGTGTTCGATGAAGTAAAGGCGGAACTGAGCTGGCTGGCAATGGGGGAGGTTGCAGTGGCCATGGCTGCTGCTTCTGCTGCCTTTGGTTTGTGA

mRNA sequence

ATGAGATGGATGAATCCGTGCAGCGGAGGCTTTGCTTCGACTGCTTTTCTGAAACTTACCCATTGCGTTTCTCAAGTTTCCATGGCACAAAAAATCATTCCATTTAACTTGTCTGAGCATCAGCTGTTCAAATCATGTCGCTACCACTCTTCAAATGATGATTCGGCCAATACCCTTCATGCCAAGATGGTAAAAAATGGTTCTATTTTGTATTTAGGAAAGTTCGTTATGAGTTCCTATGTGAAATCTGAGAAATTAGACGATGCACAGAAAGTGTTCGACGAAATGCCCCATAGAGATGTACTTTCATGGACGGTACTTATATCGGGTTTTGCTAGAGTAAATTGTTCTGAAATGGCATTGCAACTGTTTAGAGAAATGCTGGTTGATGGGGTTTGTCCAAATCATTTTACTTTGTCTTGTGTTCTTAAACTTTGTTCTAGAGTTGGTGATTTGCAAATGGGAAAGGGGATTCATGGATGGATTCTTAGAAGTGGGGTTAATTTAGATGTTGTCTTGGAGAATTCTATGCTTGATTTGTATGCAAAGTTTGATGCATTTGATTATACCAAACAATTGTTTGATTCAATGAAAGAAAAGAGTACTGCTACTTACAATATCATGCTTGGTGTGTATGTCCGTAGTTGTGATGTTAACAAATCTCTTGATTTATTCAGAAACTTGCCTTGCAGAGATACGGCGAGTTGGAATACGATTATATGTGGGCTAATGCAAGGTGGGTATCTGAATACAGCTATGGAGCTACTTTATGAGATGGTGAAGAACGAACCCGAGTTTAACGAAGTTACTTCTTCCATAGCTTTAAGTGTGGTTTCTTCTTTACTGATTATTGAGCTAGGTAGACAAGTACATGGCCGAATTTTCAGGTTCGGGCTTCATAGTGATGGATTTGTAAATAGTTCATTGATAAATATGTATGTTAAGTGTGGAAATTTGGAAAAAGCATCGGTTATATACAGTCAAATGCCTTCAAATTTTGGGAAGAGACAAGATTCGAACATTGTATGTAGCAACACGATGACAGAAATTGTTTCGCGGAGCTCAATAGTGTCTGGATATGTTCAAAATGGCAAGTATGAAGATTCCTTCAAAACTTTTGTTTCTATGGTCCGTGAACGAGCTGTGATGGACAGATTTACCATTGCAAGCATCATATCGGCGTGTTCTAATGCTGGCGTTTTAGAGCTTGGACGTACGCGTCGGAGCGGCGAGACGGAGAGGCCTTTGGGAGCGATCAAAGCTCTAGTGTTCGATGAAGTAAAGGCGGAACTGAGCTGGCTGGCAATGGGGGAGGTTGCAGTGGCCATGGCTGCTGCTTCTGCTGCCTTTGGTTTGTGA

Coding sequence (CDS)

ATGAGATGGATGAATCCGTGCAGCGGAGGCTTTGCTTCGACTGCTTTTCTGAAACTTACCCATTGCGTTTCTCAAGTTTCCATGGCACAAAAAATCATTCCATTTAACTTGTCTGAGCATCAGCTGTTCAAATCATGTCGCTACCACTCTTCAAATGATGATTCGGCCAATACCCTTCATGCCAAGATGGTAAAAAATGGTTCTATTTTGTATTTAGGAAAGTTCGTTATGAGTTCCTATGTGAAATCTGAGAAATTAGACGATGCACAGAAAGTGTTCGACGAAATGCCCCATAGAGATGTACTTTCATGGACGGTACTTATATCGGGTTTTGCTAGAGTAAATTGTTCTGAAATGGCATTGCAACTGTTTAGAGAAATGCTGGTTGATGGGGTTTGTCCAAATCATTTTACTTTGTCTTGTGTTCTTAAACTTTGTTCTAGAGTTGGTGATTTGCAAATGGGAAAGGGGATTCATGGATGGATTCTTAGAAGTGGGGTTAATTTAGATGTTGTCTTGGAGAATTCTATGCTTGATTTGTATGCAAAGTTTGATGCATTTGATTATACCAAACAATTGTTTGATTCAATGAAAGAAAAGAGTACTGCTACTTACAATATCATGCTTGGTGTGTATGTCCGTAGTTGTGATGTTAACAAATCTCTTGATTTATTCAGAAACTTGCCTTGCAGAGATACGGCGAGTTGGAATACGATTATATGTGGGCTAATGCAAGGTGGGTATCTGAATACAGCTATGGAGCTACTTTATGAGATGGTGAAGAACGAACCCGAGTTTAACGAAGTTACTTCTTCCATAGCTTTAAGTGTGGTTTCTTCTTTACTGATTATTGAGCTAGGTAGACAAGTACATGGCCGAATTTTCAGGTTCGGGCTTCATAGTGATGGATTTGTAAATAGTTCATTGATAAATATGTATGTTAAGTGTGGAAATTTGGAAAAAGCATCGGTTATATACAGTCAAATGCCTTCAAATTTTGGGAAGAGACAAGATTCGAACATTGTATGTAGCAACACGATGACAGAAATTGTTTCGCGGAGCTCAATAGTGTCTGGATATGTTCAAAATGGCAAGTATGAAGATTCCTTCAAAACTTTTGTTTCTATGGTCCGTGAACGAGCTGTGATGGACAGATTTACCATTGCAAGCATCATATCGGCGTGTTCTAATGCTGGCGTTTTAGAGCTTGGACGTACGCGTCGGAGCGGCGAGACGGAGAGGCCTTTGGGAGCGATCAAAGCTCTAGTGTTCGATGAAGTAAAGGCGGAACTGAGCTGGCTGGCAATGGGGGAGGTTGCAGTGGCCATGGCTGCTGCTTCTGCTGCCTTTGGTTTGTGA

Protein sequence

MRWMNPCSGGFASTAFLKLTHCVSQVSMAQKIIPFNLSEHQLFKSCRYHSSNDDSANTLHAKMVKNGSILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGRTRRSGETERPLGAIKALVFDEVKAELSWLAMGEVAVAMAAASAAFGL
Homology
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BLAST of Cp4.1LG07g07980 vs. Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.1e-47
Identity = 112/373 (30.03%), Postives = 202/373 (54.16%), Query Frame = 1 

Query: 39  EHQLFKSCRYHSSNDDSANTLHAKMVKNGSIL---YLGKFVMSSYVKSEKLDDAQKVFDE 98
           + Q F      SS       +H  ++ +G +    YL   ++  Y++      A+KVF  
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191

Query: 99  MPHRDVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMG 158
           MPH DV S+ V+I G+A+   S  AL+L+ +M+ DG+ P+ +T+  +L  C  + D+++G
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251

Query: 159 KGIHGWILRSG--VNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYV 218
           KG+HGWI R G   + +++L N++LD+Y K       K+ FD+MK+K   ++N M+  +V
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311

Query: 219 RSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGY-LNTAMELLYEM-VKNEPEFNEVTS 278
           R  D+  +  +F  +P RD  SWN+++ G  + G    T  EL YEM +  + + + VT 
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371

Query: 279 SIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPS 338
              +S  ++   +  GR VHG + R  L  D F++S+LI+MY KCG +E+A +++     
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK---- 431

Query: 339 NFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASI 398
                       + T  ++   +S+++G   +G  + + + F  M  E    +  T+ ++
Sbjct: 432 ------------TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 488

Query: 399 ISACSNAGVLELG 405
           ++ACS++G++E G
Sbjct: 492 LTACSHSGLVEEG 488

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BLAST of Cp4.1LG07g07980 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-44
Identity = 99/348 (28.45%), Postives = 186/348 (53.45%), Query Frame = 1 

Query: 58  TLHAKMVKN--GSILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVN 117
           +LH   VK+  GS +++   ++  Y     LD A KVF  +  +DV+SW  +I+GF +  
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211

Query: 118 CSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLEN 177
             + AL+LF++M  + V  +H T+  VL  C+++ +L+ G+ +  +I  + VN+++ L N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271

Query: 178 SMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTAS 237
           +MLD+Y K  + +  K+LFD+M+EK   T+  ML  Y  S D   + ++  ++P +D  +
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331

Query: 238 WNTIICGLMQGGYLNTAMELLYEM-VKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRI 297
           WN +I    Q G  N A+ + +E+ ++   + N++T    LS  + +  +ELGR +H  I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391

Query: 298 FRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRS 357
            + G+  +  V S+LI+MY KCG+LEK+  +++ +                   ++   S
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR----------------DVFVWS 451

Query: 358 SIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLE 403
           +++ G   +G   ++   F  M       +  T  ++  ACS+ G+++
Sbjct: 452 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483

[Close]
BLAST of Cp4.1LG07g07980 vs. Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-41
Identity = 99/356 (27.81%), Postives = 180/356 (50.56%), Query Frame = 1 

Query: 56  ANTLHAKMVKNGSILYLG-KFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARV 115
           A  LHA+ ++  S+ +     V+S Y   + L +A  +F  +    VL+W  +I  F   
Sbjct: 24  AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83

Query: 116 NCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLE 175
           +    AL  F EM   G CP+H     VLK C+ + DL+ G+ +HG+I+R G++ D+   
Sbjct: 84  SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143

Query: 176 NSMLDLYAKFDAFD---YTKQLFDSMKEK--STATYNIMLGVYVRSCDVNKSLDLFRNLP 235
           N+++++YAK            +FD M ++  ++   ++     +    ++    +F  +P
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203

Query: 236 CRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQ 295
            +D  S+NTII G  Q G    A+ ++ EM   + + +  T S  L + S  + +  G++
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263

Query: 296 VHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTE 355
           +HG + R G+ SD ++ SSL++MY K   +E +  ++S++    G               
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG--------------- 323

Query: 356 IVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
            +S +S+V+GYVQNG+Y ++ + F  MV  +        +S+I AC++   L LG+
Sbjct: 324 -ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363

[Close]
BLAST of Cp4.1LG07g07980 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.3e-40
Identity = 99/345 (28.70%), Postives = 175/345 (50.72%), Query Frame = 1 

Query: 68  SILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREM 127
           S +Y+G  ++  Y K   ++DAQ+VFDEM  R+V+SW  LI+ F +   +  AL +F+ M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244

Query: 128 LVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSG-VNLDVVLENSMLDLYAKFDA 187
           L   V P+  TL+ V+  C+ +  +++G+ +HG ++++  +  D++L N+ +D+YAK   
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304

Query: 188 FDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQG 247
               + +FDSM  ++      M+  Y  +     +  +F  +  R+  SWN +I G  Q 
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364

Query: 248 GYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQV------HGRIFRFGLH 307
           G    A+ L   + +        + +  L   + L  + LG Q       HG  F+ G  
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424

Query: 308 SDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGY 367
            D FV +SLI+MYVKCG +E+  +++ +M                   + VS ++++ G+
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----------------DCVSWNAMIIGF 484

Query: 368 VQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
            QNG   ++ + F  M+      D  T+  ++SAC +AG +E GR
Sbjct: 485 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513

[Close]
BLAST of Cp4.1LG07g07980 vs. Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.7e-39
Identity = 97/335 (28.96%), Postives = 173/335 (51.64%), Query Frame = 1 

Query: 70  LYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREMLV 129
           LY    ++S YVKS  L  A+ VFD MP RDV+SW  ++ G+A+      AL  ++E   
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172

Query: 130 DGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFDAFDY 189
            G+  N F+ + +L  C +   LQ+ +  HG +L +G   +VVL  S++D YAK    + 
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232

Query: 190 TKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGYL 249
            K+ FD M  K    +  ++  Y +  D+  +  LF  +P ++  SW  +I G ++ G  
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292

Query: 250 NTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSL 309
           N A++L  +M+    +  + T S  L   +S+  +  G+++HG + R  +  +  V SSL
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352

Query: 310 INMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDS 369
           I+MY K G+LE +  ++               +C +   + V  ++++S   Q+G    +
Sbjct: 353 IDMYSKSGSLEASERVFR--------------ICDD-KHDCVFWNTMISALAQHGLGHKA 412

Query: 370 FKTFVSMVRERAVMDRFTIASIISACSNAGVLELG 405
            +    M++ R   +R T+  I++ACS++G++E G
Sbjct: 413 LRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432

[Close]
BLAST of Cp4.1LG07g07980 vs. TrEMBL
Match: A0A0A0LKI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074230 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.1e-180
Identity = 318/405 (78.52%), Postives = 359/405 (88.64%), Query Frame = 1 

Query: 1   MRWMNPCSGGFASTAFLKLTHCVSQVSMAQKIIPFNLSEHQLFKSCRYHSSNDDSANTLH 60
           MRWMN  S  F S AFLKL+H +SQ +M  KII FNLSEH LFKS  YH+SN  S+NTLH
Sbjct: 1   MRWMNLSSSCFPSPAFLKLSHSISQGTMTHKIISFNLSEHHLFKSFSYHTSNHFSSNTLH 60

Query: 61  AKMVKNGSILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMA 120
           AKMVK GSI   GKFV++SYVKSEKL+DAQK+FDEMP+RDVL+WT LISGF+RVN S MA
Sbjct: 61  AKMVKIGSIFVSGKFVLTSYVKSEKLNDAQKLFDEMPNRDVLTWTALISGFSRVNSSGMA 120

Query: 121 LQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLENSMLDL 180
           LQLFREMLV+GV PNHFTLS VLKLCS+VGD++MGKGIHGWILR+GV LDVVLENSMLDL
Sbjct: 121 LQLFREMLVEGVSPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSMLDL 180

Query: 181 YAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTII 240
           YAKFD F Y ++L+DSM+EKST T NI+LGVYVRSCDVNKSL LFRNLPCR+ ASWNTII
Sbjct: 181 YAKFDEFVYARKLYDSMREKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTII 240

Query: 241 CGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRIFRFGLH 300
           CGLMQGGYLN A+ELLYEMV+NE EFN  TSSIALSVVSSLLI+ELGRQVHGRI R GLH
Sbjct: 241 CGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVVSSLLILELGRQVHGRIVRCGLH 300

Query: 301 SDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGY 360
           +DGFV S+LINMY+KCGNLEKASVIYS++PS F  +Q SNIVCS+TMTEIVSRSS+V GY
Sbjct: 301 NDGFVKSALINMYIKCGNLEKASVIYSRLPSGFATKQSSNIVCSDTMTEIVSRSSMVYGY 360

Query: 361 VQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
           V+NGKYED+FKTFVSMVRER +MD+FTIA+++SACSNAGVLELGR
Sbjct: 361 VRNGKYEDAFKTFVSMVRERVLMDKFTIANVVSACSNAGVLELGR 405

[Close]
BLAST of Cp4.1LG07g07980 vs. TrEMBL
Match: Q2HW11_MEDTR (Pentatricopeptide (PPR) repeat protein OS=Medicago truncatula GN=MTR_7g079860 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.0e-101
Identity = 191/354 (53.95%), Postives = 246/354 (69.49%), Query Frame = 1 

Query: 55  SANTLHAKMVKNGS--ILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFA 114
           S   LH    K GS  IL    ++++ YVKS  LD A K+FDE+ H++  +WT+LISGFA
Sbjct: 50  SLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFA 109

Query: 115 RV-NCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDV 174
           R    SE+   LFREM  DG CPN +TLS VLK CSR  ++Q GKGIH WILR+GV  DV
Sbjct: 110 RAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDV 169

Query: 175 VLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCR 234
           VLENS+LDLY K   F+Y +  F+ M EK   ++NIM+G Y+R  DV KSL++FRN P +
Sbjct: 170 VLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK 229

Query: 235 DTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVH 294
           D  SWNTII GL+Q GY   A+E LY MV +  EF+ VT SIAL +VSSL ++E+GRQ+H
Sbjct: 230 DVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLH 289

Query: 295 GRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIV 354
           GR+  FGL+SDG++ SSL+ MY KCG ++KAS I   +P NF ++ +  + C      +V
Sbjct: 290 GRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMV 349

Query: 355 SRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
           S SS+VSGYV NGKYED  KTF SMV E  V+D  T+A+IISAC+NAG+LE G+
Sbjct: 350 SWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGK 403

[Close]
BLAST of Cp4.1LG07g07980 vs. TrEMBL
Match: A0A061EZM4_THECC (Tetratricopeptide-like helical, putative isoform 1 OS=Theobroma cacao GN=TCM_025256 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 8.8e-101
Identity = 198/400 (49.50%), Postives = 277/400 (69.25%), Query Frame = 1 

Query: 15  AFLKLTHCVSQVS-MAQKIIPFNLSEHQLFKSCRYHS------SNDDSANTLHAKMVKNG 74
           A +K      Q+S + +K+ PFN      F  C+++S      S +DS   LHAK +KNG
Sbjct: 16  AVIKCVPKSPQISCLLKKLPPFN------FHQCKFYSRQPLLLSANDSL--LHAKAIKNG 75

Query: 75  SI--LYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFR 134
           S   L +  +++  Y KS+ L DA+KVFDEM  RDV +WT+L+S FAR   + + L+LFR
Sbjct: 76  SFQNLDVASYLLRLYGKSKCLSDARKVFDEMSQRDVRTWTILVSSFARAGSNGIVLELFR 135

Query: 135 EMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFD 194
           +M  + V PN FTLS VLK CS + +L++GKG+HGWILR+GV  DVVL NS+LD Y K +
Sbjct: 136 DMQNETVKPNQFTLSIVLKCCSSLSELRIGKGVHGWILRNGVVFDVVLGNSLLDFYVKCE 195

Query: 195 AFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQ 254
            F   K LF+ M+E+++ ++NIM+G ++   DV K++D+FR L  +D ASWNTII GLM+
Sbjct: 196 DFGSAKWLFELMEERNSVSWNIMIGAHLNIGDVEKAVDMFRRLSSKDVASWNTIIDGLMR 255

Query: 255 GGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFV 314
            G    A+ELLYEMVKN    +EVT SI+L +VSS + IELG+Q+HGR+ R G H DGF+
Sbjct: 256 NGPKRMALELLYEMVKNGTVLDEVTFSISLVLVSSFMDIELGKQIHGRVLRLGFHVDGFI 315

Query: 315 NSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGK 374
            +SLI+MY KCG +E A  ++ +M S+FG+++       N++ EIVS SSIVSG+V NG+
Sbjct: 316 RASLIDMYCKCGKMEMALEVFKRMNSDFGRKE-------NSIEEIVSWSSIVSGFVLNGE 375

Query: 375 YEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
            ED+FKTF SM+ +   +DRFT+ SI+SAC+N+GVLELG+
Sbjct: 376 IEDAFKTFTSMISKEIEVDRFTVTSIVSACANSGVLELGQ 400

[Close]
BLAST of Cp4.1LG07g07980 vs. TrEMBL
Match: K7MUG7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G241500 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99
Identity = 192/378 (50.79%), Postives = 256/378 (67.72%), Query Frame = 1 

Query: 34  PFNLSEHQLFKSCR-YH---SSNDDSANTLHAKMVKNGSILYLG--KFVMSSYVKSEKLD 93
           PF+L   +  +SC  YH   S++     TLHA  VKNGS+  L     +++ Y KS  + 
Sbjct: 30  PFHL---RWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMA 89

Query: 94  DAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCS 153
            AQK+FDE+P R+  +WT+LISGFAR   SEM   LFREM   G CPN +TLS VLK CS
Sbjct: 90  HAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCS 149

Query: 154 RVGDLQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNI 213
              +LQ+GKG+H W+LR+G+++DVVL NS+LDLY K   F+Y ++LF+ M E    ++NI
Sbjct: 150 LDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNI 209

Query: 214 MLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFN 273
           M+G Y+R+ DV KSLD+FR LP +D  SWNTI+ GL+Q GY   A+E LY MV+   EF+
Sbjct: 210 MIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFS 269

Query: 274 EVTSSIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYS 333
            VT SIAL + SSL  +ELGRQ+HG + +FG  SDGF+ SSL+ MY KCG ++KAS+I  
Sbjct: 270 AVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILR 329

Query: 334 QMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFT 393
            +P +  ++ ++ +        IVS  S+VSGYV NGKYED  KTF  MVRE  V+D  T
Sbjct: 330 DVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRT 389

Query: 394 IASIISACSNAGVLELGR 406
           + +IISAC+NAG+LE GR
Sbjct: 390 VTTIISACANAGILEFGR 404

[Close]
BLAST of Cp4.1LG07g07980 vs. TrEMBL
Match: A0A0L9U2H6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g040400 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.8e-99
Identity = 184/358 (51.40%), Postives = 243/358 (67.88%), Query Frame = 1 

Query: 50  SSNDDSANTLHAKMVKNGSI--LYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVL 109
           S+      TLHA  VKNGS+  + L   +++ YVKS  +  AQK+FDE+P ++   WT+L
Sbjct: 60  SNGPPPPGTLHALSVKNGSLQTMNLASHLLTLYVKSYNMGHAQKLFDEIPLKNTHIWTIL 119

Query: 110 ISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGV 169
           ISGF R   SEM   LFREM   G CPN +TLS V K CS   +LQ GKG+H W+LR GV
Sbjct: 120 ISGFVRAGSSEMVFNLFREMQAKGACPNQYTLSSVFKCCSFDNNLQFGKGVHAWMLRHGV 179

Query: 170 NLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRN 229
           ++DVVL NS LD+Y K +AF Y ++LF+ M E+   ++NIM+G Y+R  DV KSLD+FRN
Sbjct: 180 DVDVVLGNSALDVYLKCNAFQYAERLFELMDERDVVSWNIMIGAYLRVGDVEKSLDMFRN 239

Query: 230 LPCRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELG 289
            PC+D  SWNTI+ GLMQ GY   A+E L+ MV    EF++VT SIAL + SSL ++ELG
Sbjct: 240 FPCKDVVSWNTIVDGLMQCGYERRALEQLHCMVGYGTEFSDVTFSIALILASSLSLVELG 299

Query: 290 RQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTM 349
           RQ+HG + + G H+DGF  SSLI MY KCG ++KAS+I   +P +F ++ +  +    T 
Sbjct: 300 RQLHGMVLKRGFHTDGFTKSSLIEMYCKCGRIDKASIILRDVPLDFRRKGNVGVTSKETK 359

Query: 350 TEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
             IVS  S+VSGYV NGKYED  K F SMVRE  V+D  T+ ++ISAC+N G+L+ GR
Sbjct: 360 AGIVSWGSMVSGYVWNGKYEDGLKAFRSMVRELVVVDIRTVTTVISACANVGILDFGR 417

[Close]
BLAST of Cp4.1LG07g07980 vs. TAIR10
Match: AT3G04750.1 (AT3G04750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-48
Identity = 112/373 (30.03%), Postives = 202/373 (54.16%), Query Frame = 1 

Query: 39  EHQLFKSCRYHSSNDDSANTLHAKMVKNGSIL---YLGKFVMSSYVKSEKLDDAQKVFDE 98
           + Q F      SS       +H  ++ +G +    YL   ++  Y++      A+KVF  
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191

Query: 99  MPHRDVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMG 158
           MPH DV S+ V+I G+A+   S  AL+L+ +M+ DG+ P+ +T+  +L  C  + D+++G
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251

Query: 159 KGIHGWILRSG--VNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYV 218
           KG+HGWI R G   + +++L N++LD+Y K       K+ FD+MK+K   ++N M+  +V
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311

Query: 219 RSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGY-LNTAMELLYEM-VKNEPEFNEVTS 278
           R  D+  +  +F  +P RD  SWN+++ G  + G    T  EL YEM +  + + + VT 
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371

Query: 279 SIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPS 338
              +S  ++   +  GR VHG + R  L  D F++S+LI+MY KCG +E+A +++     
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK---- 431

Query: 339 NFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASI 398
                       + T  ++   +S+++G   +G  + + + F  M  E    +  T+ ++
Sbjct: 432 ------------TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 488

Query: 399 ISACSNAGVLELG 405
           ++ACS++G++E G
Sbjct: 492 LTACSHSGLVEEG 488

[Close]
BLAST of Cp4.1LG07g07980 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 182.2 bits (461), Expect = 7.2e-46
Identity = 99/348 (28.45%), Postives = 186/348 (53.45%), Query Frame = 1 

Query: 58  TLHAKMVKN--GSILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVN 117
           +LH   VK+  GS +++   ++  Y     LD A KVF  +  +DV+SW  +I+GF +  
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211

Query: 118 CSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLEN 177
             + AL+LF++M  + V  +H T+  VL  C+++ +L+ G+ +  +I  + VN+++ L N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271

Query: 178 SMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTAS 237
           +MLD+Y K  + +  K+LFD+M+EK   T+  ML  Y  S D   + ++  ++P +D  +
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331

Query: 238 WNTIICGLMQGGYLNTAMELLYEM-VKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRI 297
           WN +I    Q G  N A+ + +E+ ++   + N++T    LS  + +  +ELGR +H  I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391

Query: 298 FRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRS 357
            + G+  +  V S+LI+MY KCG+LEK+  +++ +                   ++   S
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR----------------DVFVWS 451

Query: 358 SIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLE 403
           +++ G   +G   ++   F  M       +  T  ++  ACS+ G+++
Sbjct: 452 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483

[Close]
BLAST of Cp4.1LG07g07980 vs. TAIR10
Match: AT3G23330.1 (AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 2.2e-42
Identity = 99/356 (27.81%), Postives = 180/356 (50.56%), Query Frame = 1 

Query: 56  ANTLHAKMVKNGSILYLG-KFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARV 115
           A  LHA+ ++  S+ +     V+S Y   + L +A  +F  +    VL+W  +I  F   
Sbjct: 24  AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83

Query: 116 NCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLE 175
           +    AL  F EM   G CP+H     VLK C+ + DL+ G+ +HG+I+R G++ D+   
Sbjct: 84  SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143

Query: 176 NSMLDLYAKFDAFD---YTKQLFDSMKEK--STATYNIMLGVYVRSCDVNKSLDLFRNLP 235
           N+++++YAK            +FD M ++  ++   ++     +    ++    +F  +P
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203

Query: 236 CRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQ 295
            +D  S+NTII G  Q G    A+ ++ EM   + + +  T S  L + S  + +  G++
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263

Query: 296 VHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTE 355
           +HG + R G+ SD ++ SSL++MY K   +E +  ++S++    G               
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG--------------- 323

Query: 356 IVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
            +S +S+V+GYVQNG+Y ++ + F  MV  +        +S+I AC++   L LG+
Sbjct: 324 -ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363

[Close]
BLAST of Cp4.1LG07g07980 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-41
Identity = 99/345 (28.70%), Postives = 175/345 (50.72%), Query Frame = 1 

Query: 68  SILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREM 127
           S +Y+G  ++  Y K   ++DAQ+VFDEM  R+V+SW  LI+ F +   +  AL +F+ M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244

Query: 128 LVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSG-VNLDVVLENSMLDLYAKFDA 187
           L   V P+  TL+ V+  C+ +  +++G+ +HG ++++  +  D++L N+ +D+YAK   
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304

Query: 188 FDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQG 247
               + +FDSM  ++      M+  Y  +     +  +F  +  R+  SWN +I G  Q 
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364

Query: 248 GYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQV------HGRIFRFGLH 307
           G    A+ L   + +        + +  L   + L  + LG Q       HG  F+ G  
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424

Query: 308 SDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGY 367
            D FV +SLI+MYVKCG +E+  +++ +M                   + VS ++++ G+
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----------------DCVSWNAMIIGF 484

Query: 368 VQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
            QNG   ++ + F  M+      D  T+  ++SAC +AG +E GR
Sbjct: 485 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513

[Close]
BLAST of Cp4.1LG07g07980 vs. TAIR10
Match: AT2G21090.1 (AT2G21090.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-40
Identity = 97/335 (28.96%), Postives = 173/335 (51.64%), Query Frame = 1 

Query: 70  LYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREMLV 129
           LY    ++S YVKS  L  A+ VFD MP RDV+SW  ++ G+A+      AL  ++E   
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172

Query: 130 DGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFDAFDY 189
            G+  N F+ + +L  C +   LQ+ +  HG +L +G   +VVL  S++D YAK    + 
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232

Query: 190 TKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGYL 249
            K+ FD M  K    +  ++  Y +  D+  +  LF  +P ++  SW  +I G ++ G  
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292

Query: 250 NTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSL 309
           N A++L  +M+    +  + T S  L   +S+  +  G+++HG + R  +  +  V SSL
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352

Query: 310 INMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDS 369
           I+MY K G+LE +  ++               +C +   + V  ++++S   Q+G    +
Sbjct: 353 IDMYSKSGSLEASERVFR--------------ICDD-KHDCVFWNTMISALAQHGLGHKA 412

Query: 370 FKTFVSMVRERAVMDRFTIASIISACSNAGVLELG 405
            +    M++ R   +R T+  I++ACS++G++E G
Sbjct: 413 LRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432

[Close]
BLAST of Cp4.1LG07g07980 vs. NCBI nr
Match: gi|700206143|gb|KGN61262.1| (hypothetical protein Csa_2G074230 [Cucumis sativus])

HSP 1 Score: 641.0 bits (1652), Expect = 1.6e-180
Identity = 318/405 (78.52%), Postives = 359/405 (88.64%), Query Frame = 1 

Query: 1   MRWMNPCSGGFASTAFLKLTHCVSQVSMAQKIIPFNLSEHQLFKSCRYHSSNDDSANTLH 60
           MRWMN  S  F S AFLKL+H +SQ +M  KII FNLSEH LFKS  YH+SN  S+NTLH
Sbjct: 1   MRWMNLSSSCFPSPAFLKLSHSISQGTMTHKIISFNLSEHHLFKSFSYHTSNHFSSNTLH 60

Query: 61  AKMVKNGSILYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGFARVNCSEMA 120
           AKMVK GSI   GKFV++SYVKSEKL+DAQK+FDEMP+RDVL+WT LISGF+RVN S MA
Sbjct: 61  AKMVKIGSIFVSGKFVLTSYVKSEKLNDAQKLFDEMPNRDVLTWTALISGFSRVNSSGMA 120

Query: 121 LQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDVVLENSMLDL 180
           LQLFREMLV+GV PNHFTLS VLKLCS+VGD++MGKGIHGWILR+GV LDVVLENSMLDL
Sbjct: 121 LQLFREMLVEGVSPNHFTLSTVLKLCSKVGDVRMGKGIHGWILRNGVKLDVVLENSMLDL 180

Query: 181 YAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCRDTASWNTII 240
           YAKFD F Y ++L+DSM+EKST T NI+LGVYVRSCDVNKSL LFRNLPCR+ ASWNTII
Sbjct: 181 YAKFDEFVYARKLYDSMREKSTDTDNIILGVYVRSCDVNKSLHLFRNLPCRNAASWNTII 240

Query: 241 CGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVHGRIFRFGLH 300
           CGLMQGGYLN A+ELLYEMV+NE EFN  TSSIALSVVSSLLI+ELGRQVHGRI R GLH
Sbjct: 241 CGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVVSSLLILELGRQVHGRIVRCGLH 300

Query: 301 SDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDSNIVCSNTMTEIVSRSSIVSGY 360
           +DGFV S+LINMY+KCGNLEKASVIYS++PS F  +Q SNIVCS+TMTEIVSRSS+V GY
Sbjct: 301 NDGFVKSALINMYIKCGNLEKASVIYSRLPSGFATKQSSNIVCSDTMTEIVSRSSMVYGY 360

Query: 361 VQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
           V+NGKYED+FKTFVSMVRER +MD+FTIA+++SACSNAGVLELGR
Sbjct: 361 VRNGKYEDAFKTFVSMVRERVLMDKFTIANVVSACSNAGVLELGR 405

[Close]
BLAST of Cp4.1LG07g07980 vs. NCBI nr
Match: gi|778667866|ref|XP_011648996.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.7e-166
Identity = 293/366 (80.05%), Postives = 331/366 (90.44%), Query Frame = 1 

Query: 40  HQLFKSCRYHSSNDDSANTLHAKMVKNGSILYLGKFVMSSYVKSEKLDDAQKVFDEMPHR 99
           H LFKS  YH+SN  S+NTLHAKMVK GSI   GKFV++SYVKSEKL+DAQK+FDEMP+R
Sbjct: 299 HHLFKSFSYHTSNHFSSNTLHAKMVKIGSIFVSGKFVLTSYVKSEKLNDAQKLFDEMPNR 358

Query: 100 DVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIH 159
           DVL+WT LISGF+RVN S MALQLFREMLV+GV PNHFTLS VLKLCS+VGD++MGKGIH
Sbjct: 359 DVLTWTALISGFSRVNSSGMALQLFREMLVEGVSPNHFTLSTVLKLCSKVGDVRMGKGIH 418

Query: 160 GWILRSGVNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVN 219
           GWILR+GV LDVVLENSMLDLYAKFD F Y ++L+DSM+EKST T NI+LGVYVRSCDVN
Sbjct: 419 GWILRNGVKLDVVLENSMLDLYAKFDEFVYARKLYDSMREKSTDTDNIILGVYVRSCDVN 478

Query: 220 KSLDLFRNLPCRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVS 279
           KSL LFRNLPCR+ ASWNTIICGLMQGGYLN A+ELLYEMV+NE EFN  TSSIALSVVS
Sbjct: 479 KSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTSSIALSVVS 538

Query: 280 SLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPSNFGKRQDS 339
           SLLI+ELGRQVHGRI R GLH+DGFV S+LINMY+KCGNLEKASVIYS++PS F  +Q S
Sbjct: 539 SLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSRLPSGFATKQSS 598

Query: 340 NIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAG 399
           NIVCS+TMTEIVSRSS+V GYV+NGKYED+FKTFVSMVRER +MD+FTIA+++SACSNAG
Sbjct: 599 NIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIANVVSACSNAG 658

Query: 400 VLELGR 406
           VLELGR
Sbjct: 659 VLELGR 664

[Close]
BLAST of Cp4.1LG07g07980 vs. NCBI nr
Match: gi|659082472|ref|XP_008441858.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis melo])

HSP 1 Score: 590.1 bits (1520), Expect = 3.3e-165
Identity = 293/374 (78.34%), Postives = 335/374 (89.57%), Query Frame = 1 

Query: 35  FNLSEH---QLFKSCRYHSSNDDSANTLHAKMVKNGSILYLGKFVMSSYVKSEKLDDAQK 94
           F+LS +    L K C YH+SN  S+NTLHAKMVK GSI+  GKFV++SYVKS+KL+DAQK
Sbjct: 287 FSLSSYFFPPLXKFC-YHTSNSFSSNTLHAKMVKIGSIIESGKFVLTSYVKSKKLNDAQK 346

Query: 95  VFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGD 154
           +FDEMP+RDVL+WT +ISGF+RVNCS MALQLFREMLV+GVCPNHFTLS VLKLCS+VGD
Sbjct: 347 LFDEMPNRDVLTWTAIISGFSRVNCSGMALQLFREMLVEGVCPNHFTLSTVLKLCSKVGD 406

Query: 155 LQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGV 214
           ++MGKGIHGWILR+GV LDVVLENS+LDLYAKFD F Y ++L+DSM EKST T NI+LGV
Sbjct: 407 VRMGKGIHGWILRNGVKLDVVLENSLLDLYAKFDEFVYARKLYDSMGEKSTDTDNIILGV 466

Query: 215 YVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTS 274
           YVRSCDVNKSL LFRNLPCR+ ASWNTIICGLMQGGYLN A+ELLYEMV+NE EFN  TS
Sbjct: 467 YVRSCDVNKSLHLFRNLPCRNAASWNTIICGLMQGGYLNAALELLYEMVENESEFNNFTS 526

Query: 275 SIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPS 334
           SIALSV SSLLI+ELGRQVHGRI R GLH+DGFV S+LINMY+KCGNLEKASVIYSQ+PS
Sbjct: 527 SIALSVASSLLILELGRQVHGRIVRCGLHNDGFVKSALINMYIKCGNLEKASVIYSQLPS 586

Query: 335 NFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASI 394
            F  +Q SNIVCS+TMTEIVSRSS+V GYV+NGKYED+FKTFVSMVRER +MD+FTIAS+
Sbjct: 587 GFATKQGSNIVCSDTMTEIVSRSSMVYGYVRNGKYEDAFKTFVSMVRERVLMDKFTIASV 646

Query: 395 ISACSNAGVLELGR 406
           +SAC+NAGVLELGR
Sbjct: 647 VSACANAGVLELGR 659

[Close]
BLAST of Cp4.1LG07g07980 vs. NCBI nr
Match: gi|645223240|ref|XP_008218536.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Prunus mume])

HSP 1 Score: 402.5 bits (1033), Expect = 9.6e-109
Identity = 200/376 (53.19%), Postives = 273/376 (72.61%), Query Frame = 1 

Query: 39  EHQLFKSCRYHSS-------NDDSANTLHAKMVKNGSI--LYLGKFVMSSYVKSEKLDDA 98
           E+Q F+   ++ S       N+   +TLHAK VKNGS+  L +  +V S YVKS KLD A
Sbjct: 30  EYQRFQHYGWYQSRAVGDLPNESLPDTLHAKSVKNGSLDNLDVRNYVTSLYVKSNKLDYA 89

Query: 99  QKVFDEMPHRDVLSWTVLISGFARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRV 158
            K+F E P RDV SWT+LISGFAR+      L+LF+ M ++ VCPN FTLS VLK CS +
Sbjct: 90  HKLFGESPDRDVRSWTILISGFARIGYCRTVLELFKRMQIERVCPNQFTLSSVLKSCSSL 149

Query: 159 GDLQMGKGIHGWILRSGVNLDVVLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIML 218
            D +MGKGIHGWIL +G++LDVVLENS+LD+Y K  AFDY ++ F++MKE+ T T+N+M+
Sbjct: 150 SDFRMGKGIHGWILSNGIDLDVVLENSILDVYVKCGAFDYAEKFFETMKERDTVTWNVMM 209

Query: 219 GVYVRSCDVNKSLDLFRNLPCRDTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEV 278
           G Y+ + D+ K+LDLFR LP +D ASWNTII GLM+ G+   A+ LL EMV+  P F++V
Sbjct: 210 GAYMHTGDMEKALDLFRRLPFKDVASWNTIIYGLMRNGHETYALALLSEMVEIGPPFDKV 269

Query: 279 TSSIALSVVSSLLIIELGRQVHGRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQM 338
           T S+AL + SSL ++ELGRQ+HG + RFG+ +DGF+ +SLI+MY KCG +EKAS+++  +
Sbjct: 270 TFSVALVLASSLYVLELGRQIHGCVLRFGIQNDGFLRTSLIDMYSKCGKMEKASLVFKTL 329

Query: 339 PSNFGKRQDSNIVCSNTMTEIVSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIA 398
           P     R +S   C  T TE+VS SS+VSGYV+NG+YE +  TF SMVRE+ ++DRF++ 
Sbjct: 330 P----LRTNSKFTCHETKTEVVSWSSMVSGYVRNGEYEYALLTFCSMVREQIMVDRFSVT 389

Query: 399 SIISACSNAGVLELGR 406
           SI+SAC+N G+L LG+
Sbjct: 390 SIVSACANVGILLLGQ 401

[Close]
BLAST of Cp4.1LG07g07980 vs. NCBI nr
Match: gi|1009118272|ref|XP_015875769.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus jujuba])

HSP 1 Score: 392.5 bits (1007), Expect = 9.9e-106
Identity = 205/415 (49.40%), Postives = 285/415 (68.67%), Query Frame = 1 

Query: 1   MRWMNPCSGGFASTAFLKLTHCVSQVSMAQ-KIIPFNLSEHQLFKSCRYHSSNDDSA--- 60
           MRW +  +  F +   LK TH + Q++ A   +      +   F    YHSS  + +   
Sbjct: 1   MRWSSLSTRSFITATLLKNTHSLLQLTAATVNVTNTKRFDFHGFNFFCYHSSTVNGSPFN 60

Query: 61  ---NTLHAKMVKNGSI--LYLGKFVMSSYVKSEKLDDAQKVFDEMPHRDVLSWTVLISGF 120
               TLHA+++KNG+   L +G +++  YVKSE LD A KVFDE+P  DV +WT+LISG 
Sbjct: 61  SPPQTLHAQVLKNGTFRSLNVGNYILDCYVKSENLDCAYKVFDELPDSDVRTWTILISGL 120

Query: 121 ARVNCSEMALQLFREMLVDGVCPNHFTLSCVLKLCSRVGDLQMGKGIHGWILRSGVNLDV 180
           AR+    M ++LFREM V+GV PN +TLS VL+ CS VG+L+M KGIH WIL +G+ LDV
Sbjct: 121 ARIGYLRMVMELFREMQVEGVYPNQYTLSAVLRCCSSVGELKMAKGIHCWILVNGIYLDV 180

Query: 181 VLENSMLDLYAKFDAFDYTKQLFDSMKEKSTATYNIMLGVYVRSCDVNKSLDLFRNLPCR 240
           VLENS+LD+Y K   F Y ++LF++M+ K T T NI++G Y+R   + K+LDLFR L  +
Sbjct: 181 VLENSVLDVYMKCGDFHYAEKLFETMENKDTVTCNILIGAYMRVGYMEKALDLFRKLLLK 240

Query: 241 DTASWNTIICGLMQGGYLNTAMELLYEMVKNEPEFNEVTSSIALSVVSSLLIIELGRQVH 300
           D ASWNTII GL+Q GY  TA+ELLYEMVK  P F++VT S+AL + SSLL++ELGRQVH
Sbjct: 241 DVASWNTIIDGLIQNGYERTALELLYEMVKVGPAFDKVTFSVALVLASSLLLLELGRQVH 300

Query: 301 GRIFRFGLHSDGFVNSSLINMYVKCGNLEKASVIYSQMPS-NFGKRQDSNIVCSNTMTEI 360
           G + R G+H++GF+ SSLI+MY KCG + KAS+I  + P  +FG R+ S       MTEI
Sbjct: 301 GFVVRLGIHNEGFIRSSLIDMYGKCGKMHKASLILRKTPQFHFGTRR-SKFPDDEAMTEI 360

Query: 361 VSRSSIVSGYVQNGKYEDSFKTFVSMVRERAVMDRFTIASIISACSNAGVLELGR 406
           +S SS++SGYV N +YE++ +TF+ M+ ER  +D+FT+ SI SAC+N G+L++ +
Sbjct: 361 ISWSSLISGYVCNHEYENALQTFIYMISERVWVDKFTVTSIASACANIGILKISQ 414

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP212_ARATH6.1e-4730.03Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidop... [more]
PP175_ARATH1.3e-4428.45Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP251_ARATH3.8e-4127.81Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
PP151_ARATH3.3e-4028.70Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP167_ARATH4.7e-3928.96Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN... [more]
BLAST of Cp4.1LG07g07980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKI4_CUCSA1.1e-18078.52Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074230 PE=4 SV=1[more]
Q2HW11_MEDTR1.0e-10153.95Pentatricopeptide (PPR) repeat protein OS=Medicago truncatula GN=MTR_7g079860 PE... [more]
A0A061EZM4_THECC8.8e-10149.50Tetratricopeptide-like helical, putative isoform 1 OS=Theobroma cacao GN=TCM_025... [more]
K7MUG7_SOYBN2.2e-9950.79Uncharacterized protein OS=Glycine max GN=GLYMA_18G241500 PE=4 SV=1[more]
A0A0L9U2H6_PHAAN2.8e-9951.40Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g040400 PE=4 SV=1[more]
BLAST of Cp4.1LG07g07980 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04750.13.5e-4830.03 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.17.2e-4628.45 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G23330.12.2e-4227.81 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G13600.11.8e-4128.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G21090.12.7e-4028.96 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of Cp4.1LG07g07980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206143|gb|KGN61262.1|1.6e-18078.52hypothetical protein Csa_2G074230 [Cucumis sativus][more]
gi|778667866|ref|XP_011648996.1|1.7e-16680.05PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro... [more]
gi|659082472|ref|XP_008441858.1|3.3e-16578.34PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro... [more]
gi|645223240|ref|XP_008218536.1|9.6e-10953.19PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Prunu... [more]
gi|1009118272|ref|XP_015875769.1|9.9e-10649.40PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0032472 Golgi calcium ion transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07980.1Cp4.1LG07g07980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 352..379
score: 0.0035coord: 175..200
score: 0.46coord: 307..331
score: 0.0024coord: 204..227
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 100..146
score: 9.7E-10coord: 232..275
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 103..135
score: 1.4E-7coord: 204..227
score: 7.6E-4coord: 235..262
score: 1.3E-4coord: 307..331
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 69..99
score: 6.248coord: 100..134
score: 11.367coord: 170..204
score: 7.717coord: 302..332
score: 7.98coord: 232..266
score: 9.065coord: 135..169
score: 7.191coord: 349..383
score: 7
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 76..405
score: 4.0E