Cp4.1LG07g07870 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g07870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Auxin efflux carrier family protein
Location	Cp4.1LG07 : 7070908 .. 7074698 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGTTGGGAAGATGTTTTCAAGGTGTTGTCGGCCATGGCTCCATTATACTTCGCTTTGGTCTTAGGCTATGGCTCAGTGAAATGGTGGAAGATCTTTAGCACTGAACAATGCGACGCCATTAACAAGCTCGTTTGCTATTTCACTCTTCCTCTTTTCACCTTTGAATTCACTTCCCACATCGACCCTTTTCACCTCAACTTCCATTTCATCGCCGCCGACGCTATCTCGAAGCTCGTTATCGTCCTCGTCCTCGCCTTTTGGGCTAAGTGTAGTAGCAAAGGGAGTTATTGTTGGTCTATCACTAGCTTCTCGCTCTCTACTCTAACGAATGCGCTCGTCATTGGTGTGCCACTTGCAAAGGTCATGTATGGCCAGATGGCGGTCGACCTCGTCGTGCAGGTAGGTTTGGATATTTCGTCTTTTCTGTTGTGAGTGTTTAGGGTTGAGATTTGTGATATTGTCCTCTTTGAGCTTTTCCTTTTGAGCTTACGCGTATGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACTGATGTGGGATCTCACAATCCACCCCTTTTCGAGGCCCAGCGTCCTTGCTGGCACACTAGGTGTTTGCCTCTAATATCATTTGTAACAGCTCAAGCCCACCGCTAACAGATATTGTTCTCTTTGGGTTTTTCCTTTTCAGCTCCCCCTTAAGGTTTTTAAAACGCGTCTGTTCGGGAGAGGTTTTCACACCCTTATAAAGAATGTTTCATTCTCCTCCCCAACAAATGTGGGATATCACAATCCACCCTCCCTCCAAGACCCAGTGTCGCTCATTCCTTTCTTCAATCGATGTGGGACCCCACCAAATCCACCCCTCCTTCGGGACCCAGCACCACTTTGTGTCTACCCCTTTTAGGGATGAGTCTCCTCGCTGGCACATCGCCTAGTGTCTGGCTCTGATACCATTTGTAACGGCCTAGACCCATTGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAAAGGTTTCTCCACCCTTTATAAAGGATATTCCGTTTTTCTCCCCAACCAAGGTGGGATATCACAATTTGTAATTTTGAGTGCAGGGTTCGGTGATTCAGGCCATTATTTGGCTGACAATGCTACTATTTGTATTGGAACTTCGACGAACGGGGTTGAATTTGGTAGCTAGTAGAGAATCTTCGAGCTCGGACGATGACGGGCACGAAAAAGCTATACAAATGGTGGGAGAAGGAGGGAAGGATGTGGAAGGAGGAGCCATGGAGGTTGAGGAAAGAAGAAGCAATAGCCACAAGCCTTCTTTCAAGCTTTTGATGAAGAAAGTTTGGCTAAAGTTGGTTGCAAATCCCAACTCTTATGCTTGTATCATTGGTTTGGCTTGGGCATTTGTTGCAAAAAGGTACATGCTTTGTCCTATTTAACATAGTCATGTCGAATCGAGACCACGTCCAAATGAAATTTGGTTCGAAAAACACTTAAAACAACGAACCACTATTGTGAGATCTTACATCGGTAGAAGAGGAAAACGAAGCATTTCTTACAAGGTTGTAGAAACCTCTCCCTAGTAGACGTGTTTTAAAAATCGTGAGGCTGACGACGATACGTAACGGGACAAAGTGGACAATATTTACTAGCGGTGGGCTTGGGTTATTACAAATGGTATCAAAGCCCGACATCGGGCAATTGTGAGATCTCATATCGGTTGGAAAAGAGAACAAAACATTCCTTATAAGGGTGTGAAAACTTTTCCCAGAAGACGTGAGGAAGGACAAAACATGCTAAAAAAAATTTGTGTTGGTCCGTAGTAATAGTTTTCATTCTGACCCGTGTTGGTTTATGAGAATAGTTTCACTTCAAGACAAGTAGATAGCATGATTATATCATCGAAAATGTTTTTAAATTTCGTGTGTTAATAGTAAAAAGTCTCGTTCTTAATTTTTACAGATGGCACATTGAAATGCCCGACATCATGGAAGGATCTATTCTAATCATGTCGAAAGCCGGGATTGGTACTGCCATGTTTAATATGGGTAAGATAACAAGTTTTTGAAACACTTGTGAACGTGAACTGAACCAAATCCATAATTTTTTTTTTATGTATTTGAACTGAATCTAACTGAACGCTAAGCTAAGTTGATAACTCGACTCAAACAGTACAAATTGGATCCAATTGATCGAATTCTTCAAATCTTTTGAATACCCGGAATCGATTCGACTTTGAAGTTGACGGGACGTTTAAAGTGCAGGAATCTTCATGGCATTGCAAGAGAAGTTGATAGCTTGTGGAGCTACCCTTACCATAATAGGAATGGTTCTAAAGTTTATTGCTGGACCAGCTGCCATGGCCATTGGCTCCATCGCCATGGGCTTGCATGGTGACGTTCTACGTGTCGCTATTATACAGGTCAATTTTTCCAACCAAAAAATCATACTGACACGTACCGTTTAGGTTGAGTTATGAACTTATTTGATATTTATTGCAGGCAGCAGTACCACAATCCATTACCTCTTTTATTTACGCCAAAGAATATGGGTTACATCCTGAAGTTTTCAGCACAGCGTAAGTCCCTTTTTAATAATCATAAATTTATTTCTCGAGAATATTTAGCGTTAAAAAAATGGTATTAGAGCAAAACACCGAGCGGTGTGCCAGCGATGACGCTGGACCTCTACGGGAGGTGGATTGTGAGATCCCACATCGGTTAGAGACGGACATGAAACCTTCGTGGAAATCTCTCTTTAACGGACATATTTTAAAAATCTTGAAGTGAAGCTCGAAAGGGAGAGTCCAATAAATTTAGCGTTAAAAAAATGGTATCAGAGCAAAACACCGGGCGGTGTGCCAGTGATGACGCTGAAGAGAGGTGGATTGTGAGATCCCACATTGGATAGAGAGGGCATGAAACATTCGTGGAAATCTCTCTCTAACAAACATATTTTAAAAATCTTGAAGTGAAGCTCGGAAGGGAGAGTCCAATAAATTTAGCGTTAAAAAAATGGTATCAGAGCAAGACACTGAGCGGTGTGCTAGCGATGACGCTGGACCTCCAAAGGAGATAGATTGTGAGATCCCACATCGGTTAGAGACGGGCATGAAACATTCGTGGAAATCTCTCTCTAACAAACATATTTTAAAAATCTTGAAGTGAAGCTCGGAAGGGAGAGTCCAATAAATTTAGCGTTAAAAAAATGGTATCAGAGCAAGACACTGAGCGGTGTGCTAGCGATGACGCTGGACCTCCAAAGGAGATAGATTGTGAGATCCCACATCGGTTAGAGACGGGCATGAAACATTCGTGGAAATCTCTCTCTAACAGACATATTTTAAAAATCTTGAAGTGAAGCTCGGAAGGGAGAGTCCAATAAATTTAGCGTTAAAAAAATGGTATCAGAGCAAGACACCGAGCATTGTACTAGTGATGACGTTGGACCTCCAAGGGGGTGGATTGTGAGATCCCACATCAGTGAGAGACGGGCACGAAACATTCGTGGAAATCTCTCTCTAATAAATGTTTTACGGCACTTGTCGAAGTGCCTCGACGGGTCAAAAGCTTATTAACATCTTCGACAATTAGATTAGAAATTTGAAATTCCCGTCTTTACGTGTTGTTGAACTAAAAAAACCGTTATCTGATCGAGTTATGTATTTGTTGCTTGAAATGCAGGGTGATTTTTGGGGCAATAATTTCTCTTCCTATATTGGTGGCTTATTATGCAGCTCTAGAATTCATTGTACATTGAGAGTTA

mRNA sequence

ATGATTGATGTTTTCAAGGTGTTGTCGGCCATGGCTCCATTATACTTCGCTTTGGTCTTAGGCTATGGCTCAGTGAAATGGTGGAAGATCTTTAGCACTGAACAATGCGACGCCATTAACAAGCTCGTTTGCTATTTCACTCTTCCTCTTTTCACCTTTGAATTCACTTCCCACATCGACCCTTTTCACCTCAACTTCCATTTCATCGCCGCCGACGCTATCTCGAAGCTCGTTATCGTCCTCGTCCTCGCCTTTTGGGCTAAGTGTAGTAGCAAAGGGAGTTATTGTTGGTCTATCACTAGCTTCTCGCTCTCTACTCTAACGAATGCGCTCGTCATTGGTGTGCCACTTGCAAAGGTCATGTATGGCCAGATGGCGGTCGACCTCGTCGTGCAGGATGTGGAAGGAGGAGCCATGGAGGTTGAGGAAAGAAGAAGCAATAGCCACAAGCCTTCTTTCAAGCTTTTGATGAAGAAAGTTTGGCTAAAGTTGGTTGCAAATCCCAACTCTTATGCTTGTATCATTGGTTTGGCTTGGGCATTTTTTATTGCTGGACCAGCTGCCATGGCCATTGGCTCCATCGCCATGGGCTTGCATGGTGACGTTCTACGTGTCGCTATTATACAGGCAGCAGTACCACAATCCATTACCTCTTTTATTTACGCCAAAGAATATGGGTTACATCCTGAAGTTTTCAGCACAGCGGTGATTTTTGGGGCAATAATTTCTCTTCCTATATTGGTGGCTTATTATGCAGCTCTAGAATTCATTGTACATTGAGAGTTA

Coding sequence (CDS)

ATGATTGATGTTTTCAAGGTGTTGTCGGCCATGGCTCCATTATACTTCGCTTTGGTCTTAGGCTATGGCTCAGTGAAATGGTGGAAGATCTTTAGCACTGAACAATGCGACGCCATTAACAAGCTCGTTTGCTATTTCACTCTTCCTCTTTTCACCTTTGAATTCACTTCCCACATCGACCCTTTTCACCTCAACTTCCATTTCATCGCCGCCGACGCTATCTCGAAGCTCGTTATCGTCCTCGTCCTCGCCTTTTGGGCTAAGTGTAGTAGCAAAGGGAGTTATTGTTGGTCTATCACTAGCTTCTCGCTCTCTACTCTAACGAATGCGCTCGTCATTGGTGTGCCACTTGCAAAGGTCATGTATGGCCAGATGGCGGTCGACCTCGTCGTGCAGGATGTGGAAGGAGGAGCCATGGAGGTTGAGGAAAGAAGAAGCAATAGCCACAAGCCTTCTTTCAAGCTTTTGATGAAGAAAGTTTGGCTAAAGTTGGTTGCAAATCCCAACTCTTATGCTTGTATCATTGGTTTGGCTTGGGCATTTTTTATTGCTGGACCAGCTGCCATGGCCATTGGCTCCATCGCCATGGGCTTGCATGGTGACGTTCTACGTGTCGCTATTATACAGGCAGCAGTACCACAATCCATTACCTCTTTTATTTACGCCAAAGAATATGGGTTACATCCTGAAGTTTTCAGCACAGCGGTGATTTTTGGGGCAATAATTTCTCTTCCTATATTGGTGGCTTATTATGCAGCTCTAGAATTCATTGTACATTGA

Protein sequence

MIDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPFHLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMYGQMAVDLVVQDVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFFIAGPAAMAIGSIAMGLHGDVLRVAIIQAAVPQSITSFIYAKEYGLHPEVFSTAVIFGAIISLPILVAYYAALEFIVH

Homology

[Close]

BLAST of Cp4.1LG07g07870 vs. Swiss-Prot
Match: PIN5_ARATH (Auxin efflux carrier component 5 OS=Arabidopsis thaliana GN=PIN5 PE=2 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 5.6e-61
Identity = 119/212 (56.13%), Postives = 147/212 (69.34%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD +SK++IV VLA WAK S+KGSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLV------------------------------VQDVEGGAMEVEERRSNS---H 182
           GQ AVDLV                              + DV+   + +E  +  +    
Sbjct: 126 GQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGFSSNNISDVQVDNINIESGKRETVVVG 185

[Close]

BLAST of Cp4.1LG07g07870 vs. Swiss-Prot
Match: PIN6_ORYSJ (Probable auxin efflux carrier component 6 OS=Oryza sativa subsp. japonica GN=PIN6 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.0e-43
Identity = 85/132 (64.39%), Postives = 105/132 (79.55%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV++A  PLYFAL LGYGSV+WW+IF+ EQCDA+N+LV +F LP FTFEFT H DPF
Sbjct: 6   DVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTLHTDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKG--SYCWSITSFSLSTLTNALVIGVPLAKV 122
            +N+  +AAD ISK VIV V+  WA+  SKG  +  WSITSFSLSTLTN+LV+GVP+A+ 
Sbjct: 66  QVNYRAVAADVISKAVIVAVIGAWARFMSKGGCAVSWSITSFSLSTLTNSLVVGVPMARA 125

Query: 123 MYGQMAVDLVVQ 133
           MYG+ A  LVVQ
Sbjct: 126 MYGEWAQQLVVQ 137

[Close]

BLAST of Cp4.1LG07g07870 vs. Swiss-Prot
Match: PIN4_ORYSJ (Probable auxin efflux carrier component 4 OS=Oryza sativa subsp. japonica GN=PIN4 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AMAPLYFAL LGYGSV+WW+ F+ EQC AIN +V YF++P FTF+F    DPF
Sbjct: 6   DVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVVRTDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAK------CSSKGSYCWSITSFSLSTLTNALVIGVP 122
            +N+  IAADA+SK + +  +A WA+       +  G+  WSIT FSL+ L N LV+GVP
Sbjct: 66  AMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTLVVGVP 125

Query: 123 LAKVMYGQMAVDLVVQ 133
           L   MYG+ A DLVVQ
Sbjct: 126 LLDAMYGRWAQDLVVQ 141

[Close]

BLAST of Cp4.1LG07g07870 vs. Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-33
Identity = 68/132 (51.52%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           D++ VL+A+ PLY A++L YGSV+WWKIFS +QC  IN+ V  F +PL +F F S  DP+
Sbjct: 6   DLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPY 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +NF F+AAD + K++++++LA WA  +  GS  W IT FSLSTL N LV+G+PL   MY
Sbjct: 66  AMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 123 GQMAVDLVVQDV 135
           G  A  L+VQ V
Sbjct: 126 GTYAGSLMVQVV 137

[Close]

BLAST of Cp4.1LG07g07870 vs. Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 6.4e-33
Identity = 67/132 (50.76%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           D++ VL+AM PLY A++L YGSV+WW IF+ +QC  IN+ V  F +PL +F F S  DP+
Sbjct: 6   DMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPY 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +N+HF+AAD++ K+VI+  L  W   S +GS  W IT FSLSTL N LV+G+PL + MY
Sbjct: 66  AMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPLLRAMY 125

Query: 123 GQMAVDLVVQDV 135
           G  + +L+VQ V
Sbjct: 126 GDFSGNLMVQIV 137

[Close]

BLAST of Cp4.1LG07g07870 vs. TrEMBL
Match: A0A0D3EF10_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-71
Identity = 168/342 (49.12%), Postives = 201/342 (58.77%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD ISK++IV VLAFWAK S+ GSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADIISKVIIVAVLAFWAKYSNNGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGA--------------------------MEVEERRSN----SHKPS 182
           GQ AVDLVVQ     A                          + +E+ R +      + S
Sbjct: 126 GQAAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFNTNSKEENINIEDGRKDIAVVGEQKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FVEVMSVVWLKLATNPNCYSCILGIAWAFISSRWHFEMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLR-------VAIIQAAVPQ----------------S 258
           MG+                  G VL+       +AI   AV                  S
Sbjct: 246 MGIFMALQEKFIVCGASLTALGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. TrEMBL
Match: A0A078BXC3_BRANA (BnaA10g17940D protein OS=Brassica napus GN=BnaA10g17940D PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-71
Identity = 168/342 (49.12%), Postives = 201/342 (58.77%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD ISK++IV VLAFWAK S+ GSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADIISKVIIVAVLAFWAKYSNNGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGA--------------------------MEVEERRSN----SHKPS 182
           GQ AVDLVVQ     A                          + +E+ R +      + S
Sbjct: 126 GQAAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSTNSKEENINIEDGRKDIAVVGEQKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FVEVMSVVWLKLATNPNCYSCILGIAWAFISSRWHFEMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLR-------VAIIQAAVPQ----------------S 258
           MG+                  G VL+       +AI   AV                  S
Sbjct: 246 MGIFMALQEKFIVCGASLTALGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. TrEMBL
Match: M4CWL8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-71
Identity = 168/342 (49.12%), Postives = 201/342 (58.77%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD ISK++IV VLAFWAK S+ GSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADIISKVIIVAVLAFWAKYSNNGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGA--------------------------MEVEERRSN----SHKPS 182
           GQ AVDLVVQ     A                          + +E+ R +      + S
Sbjct: 126 GQAAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSTNSKEENINIEDGRKDIAVVGEQKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FVEVMSVVWLKLATNPNCYSCILGIAWAFISSRWHFEMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLR-------VAIIQAAVPQ----------------S 258
           MG+                  G VL+       +AI   AV                  S
Sbjct: 246 MGIFMALQEKFIVCGASLTALGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. TrEMBL
Match: A0A078JKG2_BRANA (BnaCnng54140D protein OS=Brassica napus GN=BnaCnng54140D PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-71
Identity = 168/342 (49.12%), Postives = 201/342 (58.77%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD ISK++IV VLAFWAK S+ GSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADIISKVIIVAVLAFWAKYSNNGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGA--------------------------MEVEERRSN----SHKPS 182
           GQ AVDLVVQ     A                          + +E+ R +      + S
Sbjct: 126 GQAAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFNTNSKEENINIEDGRKDIAVVGEQKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FVEVMSVVWLKLATNPNCYSCILGIAWAFISSRWHFEMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLR-------VAIIQAAVPQ----------------S 258
           MG+                  G VL+       +AI   AV                  S
Sbjct: 246 MGIFMALQEKFIVCGASLTALGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. TrEMBL
Match: A0A0D3B1H7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-70
Identity = 166/342 (48.54%), Postives = 199/342 (58.19%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+ GYGSVKWW IF+ +QCDAIN+LV YFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALISGYGSVKWWNIFTRDQCDAINQLVYYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD +SK++I+ VLAFWAK SSKGSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADVLSKIIIIAVLAFWAKYSSKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGAM--------EVEERRSN----------------------SHKPS 182
           GQ AVDLVVQ     A+         +E RR+                         + S
Sbjct: 126 GQEAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSSNNKVDDINIEGGRKETVVVREEKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FLEVMSVVWLKLATNPNCYSCILGIAWAFISNRWHFEMPGIIEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLRVAIIQAAVP-----------------------QS 258
           MG+                  G VL+     AA+                        QS
Sbjct: 246 MGIFMALQDKLIVCGTSLTAMGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. TAIR10
Match: AT5G16530.1 (AT5G16530.1 Auxin efflux carrier family protein)

HSP 1 Score: 235.7 bits (600), Expect = 3.1e-62
Identity = 119/212 (56.13%), Postives = 147/212 (69.34%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD +SK++IV VLA WAK S+KGSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLV------------------------------VQDVEGGAMEVEERRSNS---H 182
           GQ AVDLV                              + DV+   + +E  +  +    
Sbjct: 126 GQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGFSSNNISDVQVDNINIESGKRETVVVG 185

[Close]

BLAST of Cp4.1LG07g07870 vs. TAIR10
Match: AT2G01420.2 (AT2G01420.2 Auxin efflux carrier family protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 68/132 (51.52%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           D++ VL+A+ PLY A++L YGSV+WWKIFS +QC  IN+ V  F +PL +F F S  DP+
Sbjct: 6   DLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPY 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +NF F+AAD + K++++++LA WA  +  GS  W IT FSLSTL N LV+G+PL   MY
Sbjct: 66  AMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 123 GQMAVDLVVQDV 135
           G  A  L+VQ V
Sbjct: 126 GTYAGSLMVQVV 137

[Close]

BLAST of Cp4.1LG07g07870 vs. TAIR10
Match: AT5G57090.1 (AT5G57090.1 Auxin efflux carrier family protein)

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34
Identity = 67/132 (50.76%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           D++ VL+AM PLY A++L YGSV+WW IF+ +QC  IN+ V  F +PL +F F S  DP+
Sbjct: 6   DMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPY 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +N+HF+AAD++ K+VI+  L  W   S +GS  W IT FSLSTL N LV+G+PL + MY
Sbjct: 66  AMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPLLRAMY 125

Query: 123 GQMAVDLVVQDV 135
           G  + +L+VQ V
Sbjct: 126 GDFSGNLMVQIV 137

[Close]

BLAST of Cp4.1LG07g07870 vs. TAIR10
Match: AT1G73590.1 (AT1G73590.1 Auxin efflux carrier family protein)

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-34
Identity = 66/132 (50.00%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           D + V++AM PLY A++L YGSVKWWKIF+ +QC  IN+ V  F +PL +F F +  +P+
Sbjct: 6   DFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPY 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +N  F+AAD++ K++++ +L  W K S  GS  W+IT FSLSTL N LV+G+PL K MY
Sbjct: 66  AMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPLLKGMY 125

Query: 123 GQMAVDLVVQDV 135
           G  + DL+VQ V
Sbjct: 126 GNFSGDLMVQIV 137

[Close]

BLAST of Cp4.1LG07g07870 vs. TAIR10
Match: AT1G23080.1 (AT1G23080.1 Auxin efflux carrier family protein)

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-33
Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           D++ VL+A+ PLY A++L YGSV+WWKIFS +QC  IN+ V  F +PL +F F S  +P+
Sbjct: 6   DLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPY 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +N  FIAAD + KL+++ +L  WA  +  GS  WSIT FSLSTL N LV+G+PL   MY
Sbjct: 66  AMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 123 GQMAVDLVVQDV 135
           G+ +  L+VQ V
Sbjct: 126 GEYSGSLMVQIV 137

[Close]

BLAST of Cp4.1LG07g07870 vs. NCBI nr
Match: gi|685377136|ref|XP_009121478.1| (PREDICTED: putative auxin efflux carrier component 8 [Brassica rapa])

HSP 1 Score: 276.2 bits (705), Expect = 6.0e-71
Identity = 168/342 (49.12%), Postives = 201/342 (58.77%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD ISK++IV VLAFWAK S+ GSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADIISKVIIVAVLAFWAKYSNNGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGA--------------------------MEVEERRSN----SHKPS 182
           GQ AVDLVVQ     A                          + +E+ R +      + S
Sbjct: 126 GQAAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSTNSKEENINIEDGRKDIAVVGEQKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FVEVMSVVWLKLATNPNCYSCILGIAWAFISSRWHFEMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLR-------VAIIQAAVPQ----------------S 258
           MG+                  G VL+       +AI   AV                  S
Sbjct: 246 MGIFMALQEKFIVCGASLTALGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. NCBI nr
Match: gi|922562856|ref|XP_013609729.1| (PREDICTED: putative auxin efflux carrier component 8 [Brassica oleracea var. oleracea])

HSP 1 Score: 276.2 bits (705), Expect = 6.0e-71
Identity = 168/342 (49.12%), Postives = 201/342 (58.77%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD ISK++IV VLAFWAK S+ GSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADIISKVIIVAVLAFWAKYSNNGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGA--------------------------MEVEERRSN----SHKPS 182
           GQ AVDLVVQ     A                          + +E+ R +      + S
Sbjct: 126 GQAAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFNTNSKEENINIEDGRKDIAVVGEQKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FVEVMSVVWLKLATNPNCYSCILGIAWAFISSRWHFEMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLR-------VAIIQAAVPQ----------------S 258
           MG+                  G VL+       +AI   AV                  S
Sbjct: 246 MGIFMALQEKFIVCGASLTALGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. NCBI nr
Match: gi|922453787|ref|XP_013629406.1| (PREDICTED: putative auxin efflux carrier component 8 [Brassica oleracea var. oleracea])

HSP 1 Score: 273.9 bits (699), Expect = 3.0e-70
Identity = 166/342 (48.54%), Postives = 199/342 (58.19%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+ GYGSVKWW IF+ +QCDAIN+LV YFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALISGYGSVKWWNIFTRDQCDAINQLVYYFTLPLFTIEFTAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD +SK++I+ VLAFWAK SSKGSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADVLSKIIIIAVLAFWAKYSSKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGAM--------EVEERRSN----------------------SHKPS 182
           GQ AVDLVVQ     A+         +E RR+                         + S
Sbjct: 126 GQEAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSSNNKVDDINIEGGRKETVVVREEKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FLEVMSVVWLKLATNPNCYSCILGIAWAFISNRWHFEMPGIIEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLRVAIIQAAVP-----------------------QS 258
           MG+                  G VL+     AA+                        QS
Sbjct: 246 MGIFMALQDKLIVCGTSLTAMGMVLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. NCBI nr
Match: gi|674962696|emb|CDX70699.1| (BnaC03g07830D [Brassica napus])

HSP 1 Score: 272.3 bits (695), Expect = 8.6e-70
Identity = 165/342 (48.25%), Postives = 198/342 (57.89%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+K + AM PLY AL+ GYGSVKWW IF+ +QCDAIN+LV YFTLPLFT EFT+H+DPF
Sbjct: 6   DVYKAIEAMVPLYVALISGYGSVKWWNIFTRDQCDAINQLVYYFTLPLFTIEFTTHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
           ++N+ FIAAD +SK++I+ VLAFWAK SSKGSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  NMNYRFIAADVLSKIIIIAVLAFWAKYSSKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGAM--------EVEERRSN----------------------SHKPS 182
           GQ AVDLVVQ     A+         +E RR+                         + S
Sbjct: 126 GQEAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSSNNKVDDINIEGGRKETVVVREEKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF-----------------FIAGPAAMAIGSIA 242
           F  +M  VWLKL  NPN Y+CI+G+AWAF                  I   A        
Sbjct: 186 FLEVMSVVWLKLATNPNCYSCILGIAWAFISNRWHFEMPGIIEGSILIMSKAGTGTAMFN 245

Query: 243 MGLH-----------------GDVLRVAIIQAAVP-----------------------QS 258
           MG+                  G VL+     AA+                        QS
Sbjct: 246 MGIFMALQDKLIVCGTSLTAMGMVLKFIAGPAAMAIGSIAVGLYGDVLRVAIIQAALPQS 305

[Close]

BLAST of Cp4.1LG07g07870 vs. NCBI nr
Match: gi|567174634|ref|XP_006400192.1| (hypothetical protein EUTSA_v10013986mg [Eutrema salsugineum])

HSP 1 Score: 268.1 bits (684), Expect = 1.6e-68
Identity = 160/342 (46.78%), Postives = 197/342 (57.60%), Query Frame = 1


Query: 3   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 62
           DV+KV+ AM PLY AL+LGYGSVKWW IF+ +QCDAIN+LVCYFTLPLFTFEF +H+DPF
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWNIFTRDQCDAINRLVCYFTLPLFTFEFAAHVDPF 65

Query: 63  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 122
            +N+ FIAAD +SK++IV VL FWAK S KGSYCWSITSFSL TLTN+LV+GVPLAK MY
Sbjct: 66  DMNYRFIAADVLSKVIIVTVLVFWAKYSKKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 123 GQMAVDLVVQDVEGGAM--------EVEERRSN----------------------SHKPS 182
           GQ AVDLVVQ     A+         +E RR+                         + S
Sbjct: 126 GQQAVDLVVQSSVFQAIVWLTLLLFVLEFRRAGFSSNTKADNINIEGGRRETLVVGEEKS 185

Query: 183 FKLLMKKVWLKLVANPNSYACIIGLAWAF------------------------------- 242
              ++  VWLKL  NPN Y+CI+G+AWAF                               
Sbjct: 186 LLEVLSIVWLKLATNPNCYSCILGVAWAFISNRWHFGMPGIMEGSILIMSKAGTGTAMFN 245

Query: 243 ---FIAGPAAMAIGSIAMGLHGDVLRVAIIQAAVPQS----------------------- 258
              F+A    + +   ++ + G  L+     AA+                          
Sbjct: 246 MGIFMALQEKLIVCGTSLTVLGMFLKFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQS 305

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIN5_ARATH	5.6e-61	56.13	Auxin efflux carrier component 5 OS=Arabidopsis thaliana GN=PIN5 PE=2 SV=2	[more]
PIN6_ORYSJ	9.0e-43	64.39	Probable auxin efflux carrier component 6 OS=Oryza sativa subsp. japonica GN=PIN...	[more]
PIN4_ORYSJ	1.6e-36	55.15	Probable auxin efflux carrier component 4 OS=Oryza sativa subsp. japonica GN=PIN...	[more]
PIN4_ARATH	2.9e-33	51.52	Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1	[more]
PIN2_ARATH	6.4e-33	50.76	Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2	[more]

BLAST of Cp4.1LG07g07870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D3EF10_BRAOL	4.1e-71	49.12	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A078BXC3_BRANA	4.1e-71	49.12	BnaA10g17940D protein OS=Brassica napus GN=BnaA10g17940D PE=4 SV=1	[more]
M4CWL8_BRARP	4.1e-71	49.12	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078JKG2_BRANA	4.1e-71	49.12	BnaCnng54140D protein OS=Brassica napus GN=BnaCnng54140D PE=4 SV=1	[more]
A0A0D3B1H7_BRAOL	2.1e-70	48.54	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of Cp4.1LG07g07870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16530.1	3.1e-62	56.13	Auxin efflux carrier family protein	[more]
AT2G01420.2	1.6e-34	51.52	Auxin efflux carrier family protein	[more]
AT5G57090.1	3.6e-34	50.76	Auxin efflux carrier family protein	[more]
AT1G73590.1	6.2e-34	50.00	Auxin efflux carrier family protein	[more]
AT1G23080.1	3.1e-33	50.76	Auxin efflux carrier family protein	[more]

BLAST of Cp4.1LG07g07870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|685377136\|ref\|XP_009121478.1\|	6.0e-71	49.12	PREDICTED: putative auxin efflux carrier component 8 [Brassica rapa]	[more]
gi\|922562856\|ref\|XP_013609729.1\|	6.0e-71	49.12	PREDICTED: putative auxin efflux carrier component 8 [Brassica oleracea var. ole...	[more]
gi\|922453787\|ref\|XP_013629406.1\|	3.0e-70	48.54	PREDICTED: putative auxin efflux carrier component 8 [Brassica oleracea var. ole...	[more]
gi\|674962696\|emb\|CDX70699.1\|	8.6e-70	48.25	BnaC03g07830D [Brassica napus]	[more]
gi\|567174634\|ref\|XP_006400192.1\|	1.6e-68	46.78	hypothetical protein EUTSA_v10013986mg [Eutrema salsugineum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR004776	Mem_trans

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0080162	intracellular auxin transport
biological_process	GO:0009555	pollen development
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0080161	auxin transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g07870.1	Cp4.1LG07g07870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 182..251 score: 6.3E-19coord: 7..132 score: 3.2
None	No IPR available	PANTHER	PTHR31752	FAMILY NOT NAMED	coord: 1..256 score: 2.9E
None	No IPR available	PANTHER	PTHR31752:SF2	AUXIN EFFLUX CARRIER COMPONENT 8-RELATED	coord: 1..256 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g07870	Cucsa.178590	Cucumber (Gy14) v1	cgycpeB0492
Cp4.1LG07g07870	CmaCh12G009550	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g07870	CmoCh12G009550	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g07870	Csa2G074170	Cucumber (Chinese Long) v2	cpecuB811
Cp4.1LG07g07870	ClCG11G010840	Watermelon (Charleston Gray)	cpewcgB723
Cp4.1LG07g07870	CSPI02G07160	Wild cucumber (PI 183967)	cpecpiB812
Cp4.1LG07g07870	Lsi11G008610	Bottle gourd (USVL1VR-Ls)	cpelsiB654
Cp4.1LG07g07870	MELO3C031244.2	Melon (DHL92) v3.6.1	cpemedB913
Cp4.1LG07g07870	CsaV3_2G009610	Cucumber (Chinese Long) v3	cpecucB1005
Cp4.1LG07g07870	Bhi06G000984	Wax gourd	cpewgoB1016
Cp4.1LG07g07870	CsGy2G007380	Cucumber (Gy14) v2	cgybcpeB261
Cp4.1LG07g07870	Carg22651	Silver-seed gourd	carcpeB0007

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g07870	Cucurbita pepo (Zucchini)	cpecpeB142
Cp4.1LG07g07870	Cucurbita maxima (Rimu)	cmacpeB790
Cp4.1LG07g07870	Cucurbita moschata (Rifu)	cmocpeB743
Cp4.1LG07g07870	Melon (DHL92) v3.5.1	cpemeB777
Cp4.1LG07g07870	Silver-seed gourd	carcpeB0238