Cp4.1LG07g07420 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g07420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Lysine--tRNA ligase
Location	Cp4.1LG07 : 6380838 .. 6387445 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGAATGGCGGGTTCAACTGAAGGGTTGGGTTCTGCTTCTGCAACTGTGGATGCAGTAGCCGATTCTGCTCCAGGTTCTGAAGAAACTATTAGCAAGAAGTAAGCATTCGGTGAATTTTTTACATTGTTATGTTTTAAGCTTTTGTGTGGAAATGGATGTAAACTTATTTAAGGCTAAGTTTAGTCTTAATAAGTAGAGTTTTTCTGGGGTTCAATTTGATTGTTTTTCTATTTTCGTTTGAAATTCTATTGCTAGTTGGATAGTTTTTCGTCGGAATGATGACTTCTGGAGTCTTGGGGTTGAACTTTGAAATGTTTTCAGTGCACGCAAGAAGGAATTAAAGCTGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAACTCAAGGAGAAAGCCAAACAGGTACTAGATGTCCACCTAAAGATTTGAGCGTGTGTTTAATGCATTAATTAAGAACAGAGCATGGTGAAATAATTATTCACAGGAAATAGAAATCCATGTCGATTGAGATAACCAAATATGATATTTCCCGTTGGCAATCTGTTTAACGACAATGTTTATCTGAAAAGAAATGAGTTGTGAGATGGTTAGATATCTTGCTATATTTTTAACTGCCACGACCGAAAGTTATTTGTGACTGAAATGTACTTATGATGTACCAGGAAGCATCCCAGAGTAAGAAATCTGTAGCAGTTGATGATGAAGAAATGGATCCCACGGTACAACTATAATGCTTTTTATTTTGACAAGTTCTGTTTAAGACCTTTAAGAACGGTTGTGAAACTGATTTATCTGCCTCAATTGTCTTGTTTTTCGCAGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTAAAAATCCATATCCTCACAAGTTTCAGGTTTCGATGTCTCTCCTCGAGTATATTGAGAAATATGGAATTTTAAACAATGGTGATCACCTTGAGGAAGTCTCGGAATCTCTTGCTGGTACTTGAACCAAAAACCATTTTCATGATTCTTTTTTTGTTGATTTCCAAATATCTTTTTTTGATCTTTTTTTTTTTGTCCCATTCAAGGGAGGATAATGAGCAAACGATCCTCCTCCTCGAAGTTGTTATTTTATGATCTTCATGGTTCTGGAGCTAAAATCCAAGTTATGGCTGATGCACGGTATGGAACTATTCTGTATCTGTCTGCACTATTTTAGTTCTAATTGTGAATATTATACTTTATGGTACTTTGGCCACTGTACTTGAACTCCAATTAATGGCTACATTTTTATTTATGTTAAAAGAAAATTTTCAACGTTCTTTTTTAATTTCTGATCCTTTTTTCTTAATGAACTTCATAGTAACTTTTATTTTTTCTTAAAAACAAACTGTTTCATCATATAAGCTACGCGTCTTTTCATGTCTCACTTTTCTTTCTCTGAGAGAATTTCCATTTTTCCACTTTCACGTATACGTTATTTTTTTTATGCTGTCAGTTCTTACCTGCACAATTTTGCTTCATTTATCTCACTTCTGTTTTCATTTTCCATCAATCTCCATAAGAATCATAGATGGTAATAACCTCGTGCTTTTGCATTAATGATTTAAGGCTCATATAAGAATTTTGTTGGAGAATTTGGAATTACGTAGATCCTGGCAAAACCACCTATTATACCCTATCATTTATGTGTCTTGAAGTGCATATGCATCAAAGCTGTTGTCATGTCTTATTTTGTGTTTTATTCCATTGAGACTTGGTTCCTATTTTGTTTTTCAATTCTATGCAAAGGCTATAACATTTCCATTTTAATGATGCAGTGTCTCAGAGCTCGATGAAGCTGAATTTGCAAGGTTACATGCCAGTGTGAAGCGTGGGGATATTGTTGGCGTCACTGGGTTTCCAGGTTGGGCTGCAAGAATTGCCTAGGCTCTTTCCATTTACTAGTATTTTCTCTTTATTTTTCAGAAGTCTAGTCTATGGTGTTTGTTCCACAATTGTCCTTTTCCCTTTCTGGTCCCTTCTGTGTGTTATCATGGCTTGATATATTCCTTGCATAGTTAAGGAAAGAGAGAGGAATTTGCAACATTGAGTTTTTATTCAGTTTTGTTTGATGTCTTTTGACCGAGCAAATTGGAGGAAATCCTTGACGGAGGAAAAAAGCCGAAGAAAAATGTTGGAAGAAGAAAATAACAGAAAAACACAAGAGAGAGAAGACGTATTGAGATTCTACTGAAGACCGGGGATTGGTTTCTCATTAGAGGCATATTTAAATAACAAATCTACGCTAAAAATGGCCCAAGTGGCCAACTAAACCTGCGCCACTTTCCTGTAAACATGGCCAGCTAAAAATATGCAATCCCATTGTACGTGTGTGCGTCAATTCAGATTGACTAAAAACAAGAATCAACTAACTAATTTTAAGGAAAATGTGAATAACCTAAATAAAGGAAAATTGTAGGCTTTTATCTAACATTGTTTCAGTTGTAGTGGGTGTGCATGTTAAAACTGTTGTCCGTCACATCCCCTGCGAGAAATCCTAATAGCAAGCCTTTTATAATTCAATGCCGCTGAAAAACCCATGACTTTGCATTTTCTTCCTTGAGCTCTTTTGTGTTTCTGTTACATGACATTTATCAACATGTTCCATTTTTGCAGGAAAAACAAAAAGGGGAGAACTCAGTATTTTTCCAAAATCATTCATTGTCCTATCTCACTGTCTGCATATGATGCCAAAGCAGAAGGCGGCTTCTGGTTCTGAGAATGCAAATTTGAAGGTAAATAAAACTAGTTTCTCTATCAAGGTTGTTTAGATGAGCCCTCATTATGTTCTCATATATCTGCAGAAAAATGACGCATGGGCCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAGGATCAGGTATCTATTCCTTTTGTGCCTCTCACTTTCTTTTGTATACTCACCGGATTATCTGTTTCACTTTCTTGTCTAAAGGGCTACAAAAAACCTCACCAATTGGTTGCTAGAAAGTATGCACATGCTAGGTTAGTTATTATGCCCACTAGTAATTGCTGTATCTATGGACAAAAGAAAAATATTGGCATATCAGTTGAAGTAAAGATAGAAAACTTCATTCTAAGAAATAGAGTAAACTACAAGCGGAATTTGAGCTTTAGGTTGTTTGCGATGTGTGTCTAGCACATGGTGTCTTTTTTTCTATATTCTTTGTACATCGTTAATCAAGTTTATATGTTAATAACAAAATACCCTTACTTCAAGAGGTTCCATTAAAATGCATTGTTTGTGTTCAACTTGTATTAGTCAAAGAACATCTTGATCTTCCTGATTCATGTATTATCTCCTGAACTAAGACCAATAGCTGTTTGACTCTATCTGTGTTCCTTGGTTTGTTGAATTTTCATCTCTGATTATCATTCCAAGACTTACTCTTGGAAATATTATGGTATAATATGCTCAATTTCCTTATTCCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGACGATCTTGACTTCTTGGAGGTATGTATACTATTGATCATTGCAATTTATGATTTTGGATGGAATGCACCTGTAATTTATTTCTCTATCTTTTTCTTAATGTCTTAACCCTTAGGTTGAGACACCAATGATGAACATGATTGCTGGAGGAGCAGCTGCCCGTCCATTTGTGACCTTCCACAATGATCTCAACATGAAATTGTTTATGCGCATTGCACCTGAACTTTATCTTAAGCAGTTAGTTGTTGGTGGATTGGACCGTGTATATGAGATAGGGAAACAATTTAGAAATGAGGGTATCGATTTGACTCATAATCCCGAGTTCACCACCTGCGAGTTCTACATGGCATTTGCAGACTACTATGATTTGATGGAACTCACTGAGAAAATGCTAAGTGGTAATGCTAAAACTTCGGACTTGAGCCCCTTTTTGTAGTTTGACTCCTCTGCTGTGAGTTTCTTTTAATTGTATCTTTTCATTTCTTCTCAATGAAAGTTGGTGTATCATAAGAAGTGTTAAAACTACGGATGTTGCATGTTAACTCCTTTGAATTCTCCATCATCGCCTTTCCCAGTTTCCATCTTTATCAACTTGTATCTCTACTCTGACACGGTTGCGACTGAAATAGGAATGGTGAAGGAGCTTACAGGTGGCTATAAAGTAAAATATCATTCAAATGGGCTTGACAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGTCTGTTTGCAATAATTTTGTTTAGCCCATGTATGAATTGAACTGTGCTGACCAGAATCTTATTTGGGATTATCTTGAATATGTTTAATGTACTGCAGGAGGATTGACATGATAGAGGAATTAGAAAAAATGGCAAATCTTAATATACCCAAGAACTTGGCCAGTGATGAAGCTAATAAATATCTTAGAGAGGCATGCCTGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAAGTAATTCTCTTAATCATATTATCTTATCTTTAGAAACTAATCTTGTTTAGATAAGATATCATATGACATGAGGAACAGGAAATATACGAGAAGAGAATCTTACTTCTGGAAAATTTACACTAATACATCTTTTACAACAGTATTAAAGTAAATTTTTTGGCAGCTTGTGGGACATTTCCTAGAAGAAACGTGCGTGAATCCTGCTTTTATCATCAATCATCCCGAGATTATGAGTCCTTTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGCTTTGAATTGTTCATCAACAAACATGAAGTAAGCTACCAAAACTCAACAATAATTAGTTTTCTGTTCTTACTTGATCAGACATGTGTCTGTATGTGTGCATGCCTTTGTGCTTCTGCTGTTAACATTTAATGGCTATTCAGGTATGTAATGCGTACACTGAATTGAATGATCCTGTTGTACAACGTCAGCGGTTTGCTGAACAACTCAAGGTATCCTGTAGTAAATACACAAATACAGTAGAGTTAAAACCCTAAAACATAAATGATGATTTGTGGAATGGATTGATGATTTGTTGGGTTTTATATTACTTGATTTCTTTAACAGGATCGACAGTCGGGTGATGATGAAGCAATGGCTTTGGATGAAACATTTTGTACGTCTCTTGATTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGCATTGACCGGCTAGCTATGTTGTTAACGGATTCGCAGAACATCAAGGTTTGTGTTTCACCCCTGTTTTCTTCTGGTGATGCATACTCGTGAAATCTTTTTTTCTCATGCTGTTCTTTTTGTGAAAACAGGAGGTTCTTCTCTTCCCAGCCATGAAGCCTCAAGATGAACCACCAGCTCCCAAAGGTGCATACTATATAATTCCTTGTCTCTAGCTATTAACTTATTTTGGGTGTCATTACTGACAATGCCTTACCTATTTAGAAACAGAACCTGTTTAATTTTGTTATTTCGAAAACACCCCATTTTTGTTTCTTGATTTTCATAGTGCTCAGGCGCAACTTTTATTTAGATTTTCAGGGGGAAAATGGATGGTTTGCTAATCCTAAAGTTGTTCAAAATGAACTTATTGTTTGTTTTTCGAGTACTAGACTGCATTTGCACCAAAGCCTGAAGAAGAGGATCTTAATCCCTCTTTTTGCGCTTTCTTACGAGAGCTTTTGATGGTAATGCCTTCCATTTATTTTCCTCCCTTTTTCAGCATCTGCAGGAGTATAGGGATTACAACATGAGGGAAAACCAAGAGGTGCGTTTGCCATCATGCATTTATTTTATTATGTTAAAAATTTTGGTCCACATTTTTCAGCTCCCCCGTGTCGAAGCATTTTTTTTTTTGGAGCTTATATGGTTATCTTTTATAAACTGATTGTGAATGCATAAGTGTCTAATTTTACGTCCCAAGTTCTTTCAAAATATTCATCTATGTACATTACTCTTATTAGCTTTCTTACTATGCAATCCAACTTAGAAGAATGGAAGTAGAAACGTTGCGAATGAAGTGAGATATTGGGCTGAATTTCTGAACTCATTTGAGAAATCTGGGCTGATTATATTCTTCTTTCATACGATTTGGATCAGAATTCTCTTTAACTCATGGTGGAAGGCTCTGAACTGAACATTATCTCCAAGATCTTCTCAACATGCATGCACAGTAATAACTCACTCATGTATGGACAGAATTCACCCTGATAAGGCCGAGTGGTTTTTCTATTTAGAAGTAGTCATAAAAAATTTAATGAACACCAGATATTAACCATGTAAATTAGTCCAGTTCAGTCATTCTACAACACTGAAAATCTCCTAGTTCTGTAGTTCAATATTTCACAAGAATGGAAAGGAGAATGGTTGCTATCTCAAAGAGGGTGAAATTAAGGGTTCTAAAAAAATGGTGAGTTGGAACAAACTGAATCAACTGGGTTGGTTCGGTTATTCCCGAAACATTGACCATCTCGGTTTGTTTCTTTATTGAGAAATAACACGTGGCTTGGACACGTGTGGAATATCTTACTCA

mRNA sequence

GTCGAATGGCGGGTTCAACTGAAGGGTTGGGTTCTGCTTCTGCAACTGTGGATGCAGTAGCCGATTCTGCTCCAGGTTCTGAAGAAACTATTAGCAAGAATGCACGCAAGAAGGAATTAAAGCTGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAACTCAAGGAGAAAGCCAAACAGGAAGCATCCCAGAGTAAGAAATCTGTAGCAGTTGATGATGAAGAAATGGATCCCACGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTAAAAATCCATATCCTCACAAGTTTCAGGTTTCGATGTCTCTCCTCGAGTATATTGAGAAATATGGAATTTTAAACAATGGTGATCACCTTGAGGAAGTCTCGGAATCTCTTGCTGGGAGGATAATGAGCAAACGATCCTCCTCCTCGAAGTTGTTATTTTATGATCTTCATGGTTCTGGAGCTAAAATCCAAGTTATGGCTGATGCACGTGTCTCAGAGCTCGATGAAGCTGAATTTGCAAGGTTACATGCCAGTGTGAAGCGTGGGGATATTGTTGGCGTCACTGGGTTTCCAGGAAAAACAAAAAGGGGAGAACTCAGTATTTTTCCAAAATCATTCATTGTCCTATCTCACTGTCTGCATATGATGCCAAAGCAGAAGGCGGCTTCTGGTTCTGAGAATGCAAATTTGAAGAAAAATGACGCATGGGCCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAGGATCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGACGATCTTGACTTCTTGGAGGTTGAGACACCAATGATGAACATGATTGCTGGAGGAGCAGCTGCCCGAATGGTGAAGGAGCTTACAGGTGGCTATAAAGTAAAATATCATTCAAATGGGCTTGACAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGAGGATTGACATGATAGAGGAATTAGAAAAAATGGCAAATCTTAATATACCCAAGAACTTGGCCAGTGATGAAGCTAATAAATATCTTAGAGAGGCATGCCTGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAACTTGTGGGACATTTCCTAGAAGAAACGTGCGTGAATCCTGCTTTTATCATCAATCATCCCGAGATTATGAGTCCTTTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGCTTTGAATTGTTCATCAACAAACATGAAGTATGTAATGCGTACACTGAATTGAATGATCCTGTTGTACAACGTCAGCGGTTTGCTGAACAACTCAAGGATCGACAGTCGGGTGATGATGAAGCAATGGCTTTGGATGAAACATTTTGTACGTCTCTTGATTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGCATTGACCGGCTAGCTATGTTGTTAACGGATTCGCAGAACATCAAGCATCTGCAGGAGTATAGGGATTACAACATGAGGGAAAACCAAGAGCTTTCTTACTATGCAATCCAACTTAGAAGAATGGAAGTAGAAACGTTGCGAATGAAGTGAGATATTGGGCTGAATTTCTGAACTCATTTGAGAAATCTGGGCTGATTATATTCTTCTTTCATACGATTTGGATCAGAATTCTCTTTAACTCATGGTGGAAGGCTCTGAACTGAACATTATCTCCAAGATCTTCTCAACATGCATGCACAGTAATAACTCACTCATGTATGGACAGAATTCACCCTGATAAGGCCGAGTGGTTTTTCTATTTAGAAGTAGTCATAAAAAATTTAATGAACACCAGATATTAACCATGTAAATTAGTCCAGTTCAGTCATTCTACAACACTGAAAATCTCCTAGTTCTGTAGTTCAATATTTCACAAGAATGGAAAGGAGAATGGTTGCTATCTCAAAGAGGGTGAAATTAAGGGTTCTAAAAAAATGGTGAGTTGGAACAAACTGAATCAACTGGGTTGGTTCGGTTATTCCCGAAACATTGACCATCTCGGTTTGTTTCTTTATTGAGAAATAACACGTGGCTTGGACACGTGTGGAATATCTTACTCA

Coding sequence (CDS)

ATGGCGGGTTCAACTGAAGGGTTGGGTTCTGCTTCTGCAACTGTGGATGCAGTAGCCGATTCTGCTCCAGGTTCTGAAGAAACTATTAGCAAGAATGCACGCAAGAAGGAATTAAAGCTGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAACTCAAGGAGAAAGCCAAACAGGAAGCATCCCAGAGTAAGAAATCTGTAGCAGTTGATGATGAAGAAATGGATCCCACGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTAAAAATCCATATCCTCACAAGTTTCAGGTTTCGATGTCTCTCCTCGAGTATATTGAGAAATATGGAATTTTAAACAATGGTGATCACCTTGAGGAAGTCTCGGAATCTCTTGCTGGGAGGATAATGAGCAAACGATCCTCCTCCTCGAAGTTGTTATTTTATGATCTTCATGGTTCTGGAGCTAAAATCCAAGTTATGGCTGATGCACGTGTCTCAGAGCTCGATGAAGCTGAATTTGCAAGGTTACATGCCAGTGTGAAGCGTGGGGATATTGTTGGCGTCACTGGGTTTCCAGGAAAAACAAAAAGGGGAGAACTCAGTATTTTTCCAAAATCATTCATTGTCCTATCTCACTGTCTGCATATGATGCCAAAGCAGAAGGCGGCTTCTGGTTCTGAGAATGCAAATTTGAAGAAAAATGACGCATGGGCCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAGGATCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGACGATCTTGACTTCTTGGAGGTTGAGACACCAATGATGAACATGATTGCTGGAGGAGCAGCTGCCCGAATGGTGAAGGAGCTTACAGGTGGCTATAAAGTAAAATATCATTCAAATGGGCTTGACAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGAGGATTGACATGATAGAGGAATTAGAAAAAATGGCAAATCTTAATATACCCAAGAACTTGGCCAGTGATGAAGCTAATAAATATCTTAGAGAGGCATGCCTGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAACTTGTGGGACATTTCCTAGAAGAAACGTGCGTGAATCCTGCTTTTATCATCAATCATCCCGAGATTATGAGTCCTTTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGCTTTGAATTGTTCATCAACAAACATGAAGTATGTAATGCGTACACTGAATTGAATGATCCTGTTGTACAACGTCAGCGGTTTGCTGAACAACTCAAGGATCGACAGTCGGGTGATGATGAAGCAATGGCTTTGGATGAAACATTTTGTACGTCTCTTGATTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGCATTGACCGGCTAGCTATGTTGTTAACGGATTCGCAGAACATCAAGCATCTGCAGGAGTATAGGGATTACAACATGAGGGAAAACCAAGAGCTTTCTTACTATGCAATCCAACTTAGAAGAATGGAAGTAGAAACGTTGCGAATGAAGTGA

Protein sequence

MAGSTEGLGSASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELKEKAKQEASQSKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDHLEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLNIPKNLASDEANKYLREACLKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTSLDYGLPPTGGWGMGIDRLAMLLTDSQNIKHLQEYRDYNMRENQELSYYAIQLRRMEVETLRMK

Homology

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BLAST of Cp4.1LG07g07420 vs. Swiss-Prot
Match: SYKC_ARATH (Lysine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g11710 PE=1 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 6.2e-110
Identity = 213/304 (70.07%), Postives = 251/304 (82.57%), Query Frame = 1


Query: 11  ASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELK-EKAKQEA-SQSKKSV 70
           +S T++A   SA       SKNA KKE K+KQKEEE+RRK+E K EKAKQ   + S+K+V
Sbjct: 19  SSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDEEKAEKAKQAPKASSQKAV 78

Query: 71  AVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDHLEEV 130
           A DDEEMD TQY+ENRLKYLA++KA G+NPYPHKF VSMS+ +YIE YG LNNGDH+E  
Sbjct: 79  AADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIPKYIETYGSLNNGDHVENA 138

Query: 131 SESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRGDIVG 190
            ESLAGRIMSKRSSSSKL FYDLHG   K+QVMADA  S LDEAEF +LH++ KRGDIVG
Sbjct: 139 EESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLDEAEFLKLHSNAKRGDIVG 198

Query: 191 VTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTRNPET 250
           V GFPGKTKRGELSIFP+SFI+LSHCLHMMP++     ++N N KK + W PG TRNPE 
Sbjct: 199 VIGFPGKTKRGELSIFPRSFILLSHCLHMMPRK-----ADNVNAKKPEIWVPGQTRNPEA 258

Query: 251 YILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGG 310
           Y+LKDQE+RYRQR+LD++LN+EVRQIF+TRAK+I YVR+FLD+ +FLEVETPMMNMIAGG
Sbjct: 259 YVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMMNMIAGG 317

Query: 311 AAAR 313
           AAAR
Sbjct: 319 AAAR 317

[Close]

BLAST of Cp4.1LG07g07420 vs. Swiss-Prot
Match: SYK_ORYSJ (Lysine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 9.2e-106
Identity = 186/261 (71.26%), Postives = 214/261 (81.99%), Query Frame = 1


Query: 257 RYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARMVKE 316
           ++R   +DL  N E    F T     ++   + D  D +E+   M++         MVKE
Sbjct: 348 QFRNEGIDLTHNPE----FTT----CEFYMAYADYNDLIELTETMLS--------GMVKE 407

Query: 317 LTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLNIPKNLASDEANKYLREA 376
           LTGGYK+KYH+NG++  PIEIDFTPPFR+IDMIEELE MA LNIPK+L+SDEANKYL +A
Sbjct: 408 LTGGYKIKYHANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKDLSSDEANKYLIDA 467

Query: 377 CLKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERF 436
           C K+++KCPPP+TT RLLDKLVGHFLEETCVNP FIINHPEIMSPLAKWHR+RP LTERF
Sbjct: 468 CAKYDVKCPPPQTTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSRPGLTERF 527

Query: 437 ELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTSLDYGLPPTGG 496
           ELF+NKHEVCNAYTELNDPVVQRQRF EQLKDRQSGDDEAMALDETFCT+L+YGLPPTGG
Sbjct: 528 ELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETFCTALEYGLPPTGG 587

Query: 497 WGMGIDRLAMLLTDSQNIKHL 518
           WG+GIDRL MLLTDSQNIK +
Sbjct: 588 WGLGIDRLTMLLTDSQNIKEV 592

[Close]

BLAST of Cp4.1LG07g07420 vs. Swiss-Prot
Match: SYK_SOLLC (Lysine--tRNA ligase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.9e-90
Identity = 149/205 (72.68%), Postives = 180/205 (87.80%), Query Frame = 1


Query: 313 MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLNIPKNLASDEANKY 372
           MVK+LTG YK++YH+NGLDN+PIEIDFTPPFR+IDM+ ELEK+AN++IP++L+S+ ANK+
Sbjct: 375 MVKDLTGSYKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEKVANISIPRDLSSESANKH 434

Query: 373 LREACLKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSL 432
           L + C KF++KCPPP TT RLLDKLVGHF+E  C+NP FIINHPEIMSPLAK  R+ P L
Sbjct: 435 LVDVCEKFDVKCPPPHTTTRLLDKLVGHFIEVNCINPTFIINHPEIMSPLAKSRRSEPGL 494

Query: 433 TERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTSLDYGLP 492
           TERF LF+N+ E+C+AYTELNDP  QR+RFAEQLKDRQ GDDEAM LDE+F T+L+YGLP
Sbjct: 495 TERFNLFVNRRELCDAYTELNDPTAQRERFAEQLKDRQLGDDEAMDLDESFITALEYGLP 554

Query: 493 PTGGWGMGIDRLAMLLTDSQNIKHL 518
           PTGG GMGIDRL MLLTDSQN+K +
Sbjct: 555 PTGGLGMGIDRLTMLLTDSQNVKEV 579

[Close]

BLAST of Cp4.1LG07g07420 vs. Swiss-Prot
Match: SYK_HUMAN (Lysine--tRNA ligase OS=Homo sapiens GN=KARS PE=1 SV=3)

HSP 1 Score: 287.7 bits (735), Expect = 2.6e-76
Identity = 140/263 (53.23%), Postives = 181/263 (68.82%), Query Frame = 1


Query: 257 RYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARMVKE 316
           ++R   +DL  N E    F T     ++   + D  D +E+   M++         MVK 
Sbjct: 321 QFRNEGIDLTHNPE----FTT----CEFYMAYADYHDLMEITEKMVS--------GMVKH 380

Query: 317 LTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLNIPKN--LASDEANKYLR 376
           +TG YKV YH +G +    ++DFTPPFRRI+M+EELEK   + +P+     ++E  K L 
Sbjct: 381 ITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILD 440

Query: 377 EACLKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTE 436
           + C+   ++CPPP TTARLLDKLVG FLE TC+NP FI +HP+IMSPLAKWHR++  LTE
Sbjct: 441 DICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTE 500

Query: 437 RFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTSLDYGLPPT 496
           RFELF+ K E+CNAYTELNDP+ QRQ F EQ K + +GDDEAM +DE FCT+L+YGLPPT
Sbjct: 501 RFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPT 560

Query: 497 GGWGMGIDRLAMLLTDSQNIKHL 518
            GWGMGIDR+AM LTDS NIK +
Sbjct: 561 AGWGMGIDRVAMFLTDSNNIKEV 567

[Close]

BLAST of Cp4.1LG07g07420 vs. Swiss-Prot
Match: SYK_CRIGR (Lysine--tRNA ligase OS=Cricetulus griseus GN=KARS PE=1 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.6e-76
Identity = 140/263 (53.23%), Postives = 180/263 (68.44%), Query Frame = 1


Query: 257 RYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARMVKE 316
           ++R   +DL  N E    F T     ++   + D  D +E+   M++         MVK 
Sbjct: 321 QFRNEGIDLTHNPE----FTT----CEFYMAYADYHDLMEITEKMLS--------GMVKS 380

Query: 317 LTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLNIPKN--LASDEANKYLR 376
           +TG YK+ YH +G + +  EIDFTPPFRRI M+EELEK   + +P+     ++E  K L 
Sbjct: 381 ITGSYKITYHPDGPEGEAYEIDFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILD 440

Query: 377 EACLKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTE 436
           + C+   ++CPPP TTARLLDKLVG FLE TC+NP FI +HP+IMSPLAKWHR++  LTE
Sbjct: 441 DICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTE 500

Query: 437 RFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTSLDYGLPPT 496
           RFELF+ K E+CNAYTELNDP+ QRQ F EQ K + +GDDEAM +DE FCT+L+YGLPPT
Sbjct: 501 RFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPT 560

Query: 497 GGWGMGIDRLAMLLTDSQNIKHL 518
            GWGMGIDR+ M LTDS NIK +
Sbjct: 561 AGWGMGIDRVTMFLTDSNNIKEV 567

[Close]

BLAST of Cp4.1LG07g07420 vs. TrEMBL
Match: A0A103XII3_CYNCS (Aminoacyl-tRNA synthetase, class II (D/K/N) OS=Cynara cardunculus var. scolymus GN=Ccrd_006552 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 5.6e-219
Identity = 387/515 (75.15%), Postives = 430/515 (83.50%), Query Frame = 1


Query: 21  SAPGSEETISKNARKKELKLKQKEEERRRKEELKEK--AKQEASQSKKSVAVDDEEMDPT 80
           SA    E +SKNARKKELK KQKEEERRRKEE KEK  A    S ++K  A DDE+MDPT
Sbjct: 33  SASSEPEVVSKNARKKELKNKQKEEERRRKEEEKEKKAASMPKSATQKQSAADDEDMDPT 92

Query: 81  QYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDHLEEVSESLAGRIMS 140
           QYF+NRLK LA+ KA G NPYPHKF VSMS+LEYIEKY  LN+GDHLE+V  SLAGR+M+
Sbjct: 93  QYFDNRLKALAAHKAAGMNPYPHKFHVSMSILEYIEKYESLNSGDHLEDVQVSLAGRLMN 152

Query: 141 KRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRGDIVGVTGFPGKTKR 200
           KRSSSSKL FYDLHGSG K+QVMADAR S+LDEAEF++ H+ VKRGDIVG+ GFPGK+KR
Sbjct: 153 KRSSSSKLFFYDLHGSGGKVQVMADARRSDLDEAEFSKYHSGVKRGDIVGIVGFPGKSKR 212

Query: 201 GELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTRNPETYILKDQETRY 260
           GELSIFPKSF VLSHCLHMMP+QK+A+ ++NAN KK D W PG  RNPE YILKDQETRY
Sbjct: 213 GELSIFPKSFTVLSHCLHMMPRQKSAAVADNANTKKVDVWTPGSGRNPEAYILKDQETRY 272

Query: 261 RQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAAR------ 320
           RQRYLDLM+N EVR IFKTRAKV+ Y+R+FLD+LDFLEVETPMMNMIAGGAAAR      
Sbjct: 273 RQRYLDLMVNSEVRHIFKTRAKVVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHH 332

Query: 321 ---------------------------MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRR 380
                                      MVKELTGGY +KYH+NGLDNDPI+IDFTPPFRR
Sbjct: 333 NDLNMRLFMRIAPELYLKELVVGGLERMVKELTGGYVIKYHANGLDNDPIQIDFTPPFRR 392

Query: 381 IDMIEELEKMANLNIPKNLASDEANKYLREACLKFEIKCPPPETTARLLDKLVGHFLEET 440
           IDMI ELE+M NL+IPK+LA DEANKYL EAC KF+IKCPPP+TTARLLDKLVGHFLEET
Sbjct: 393 IDMIGELERMXNLSIPKDLAGDEANKYLAEACTKFDIKCPPPQTTARLLDKLVGHFLEET 452

Query: 441 CVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQ 500
           CVNPAFIINHPEIMSPLAKWHR++P LTERFELFINKHE+ NAYTELNDPVVQRQRFA+Q
Sbjct: 453 CVNPAFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQ 512

[Close]

BLAST of Cp4.1LG07g07420 vs. TrEMBL
Match: F6I4L4_VITVI (Lysine--tRNA ligase OS=Vitis vinifera GN=VIT_14s0060g02350 PE=3 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.7e-194
Identity = 373/593 (62.90%), Postives = 426/593 (71.84%), Query Frame = 1


Query: 9    GSASATVDAVADSAP--GSEETISKNARKKELKLKQKEEERRRKEELKEKAKQEASQSK- 68
            G+A     A++D +    S ETISKNARKKELK+KQ+EEE++RKEE K K     S SK 
Sbjct: 961  GAAEEAAKAISDLSMDGSSSETISKNARKKELKMKQREEEKKRKEEEKVKQAAAVSSSKV 1020

Query: 69   -KSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDH 128
             K +A DDE+MDPTQYFENR+KYLA+QKA GKNPYPHKF V++S+LEYIEKYG L+NGDH
Sbjct: 1021 QKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIEKYGALSNGDH 1080

Query: 129  LEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRG 188
            LE+++ SLAGRIMSKRSSSSKL FYDLHG GAK+QVMADAR S++DEAEF+R H+ VKRG
Sbjct: 1081 LEDITVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSRFHSGVKRG 1140

Query: 189  DIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTR 248
            DIVGVTGFPGKTKRGELSIFPKSF+VLSHCLHMMP+QKA  GS+NAN+KK D W PG TR
Sbjct: 1141 DIVGVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAGPGSDNANVKKTDVWVPGSTR 1200

Query: 249  NPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNM 308
            NPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAK+I Y+R FLD+LDFLEVETPMMNM
Sbjct: 1201 NPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNM 1260

Query: 309  IAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDNDPIEIDFTP 368
            I GGAAAR                      +KEL  G   + +  G    N+ I++   P
Sbjct: 1261 IPGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP 1320

Query: 369  PFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREACLKFEIK-------- 428
             F             D++E  EKM +  + K L      KY      K  I+        
Sbjct: 1321 EFTTCEFYMAFADYNDVMELTEKMLS-GMVKELTGGYKIKYHANGLDKDPIEIDFTPPFR 1380

Query: 429  ---------------------------------------CPPPETTARLLDKLVGHFLEE 488
                                                   CPPP+TTARLLDKLVGHFLEE
Sbjct: 1381 RIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEE 1440

Query: 489  TCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAE 518
             CVNP FIINHPEIMSPLAKWHR++ SLTERFELF+NKHE+CNAYTELNDPVVQRQRFAE
Sbjct: 1441 ACVNPTFIINHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFAE 1500

[Close]

BLAST of Cp4.1LG07g07420 vs. TrEMBL
Match: F6I5G4_VITVI (Lysine--tRNA ligase OS=Vitis vinifera GN=VIT_15s0024g00700 PE=3 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 2.2e-194
Identity = 379/601 (63.06%), Postives = 433/601 (72.05%), Query Frame = 1


Query: 1   MAGSTEGLGSASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELKEKAKQE 60
           M G+ E   +A A +D   D +  S ET SKNARKKELK+KQ+EEE++RKEE  EKAKQ 
Sbjct: 1   MEGAAEE--AAKAILDLSVDGS--SSETTSKNARKKELKMKQREEEKKRKEE--EKAKQA 60

Query: 61  ASQS----KKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKY 120
           A+ S    +K +A DDE+MDPTQYFENR+KYLA+QKA GKNPYPHKF V++S+LEYI+KY
Sbjct: 61  AAVSSSKVQKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIKKY 120

Query: 121 GILNNGDHLEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFAR 180
           G L+NGDHLE+V+ SLAGRIMSKRSSSSKL FYDLHG GAK+QVMADAR S++DEAEF+R
Sbjct: 121 GALSNGDHLEDVTVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSR 180

Query: 181 LHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKND 240
            H+ VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMP+QKA  GS+NAN+KK D
Sbjct: 181 FHSGVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPGSDNANVKKTD 240

Query: 241 AWAPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLE 300
            W PG TRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAK+I Y+R FLD+LDFLE
Sbjct: 241 VWVPGSTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLE 300

Query: 301 VETPMMNMIAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDND 360
           VETPMMNMIAGGAAAR                      +KEL  G   + +  G    N+
Sbjct: 301 VETPMMNMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNE 360

Query: 361 PIEIDFTPPFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREACLKFEIK 420
            I++   P F             D++E  EKM +  + K L      KY      K  I+
Sbjct: 361 GIDLTHNPEFTTCEFYMAFADYNDVMELTEKMLS-GMVKELTGGYKIKYHANGLDKDPIE 420

Query: 421 -----------------------------------------------CPPPETTARLLDK 480
                                                          CPPP+TTARLLDK
Sbjct: 421 IDFTPPFRRIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDK 480

Query: 481 LVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPV 518
           LVGHFLEETCVNP FI NHPEIMSPLAKWHR++ SLTERFELF+NKHE+CNAYTELNDPV
Sbjct: 481 LVGHFLEETCVNPTFITNHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPV 540

[Close]

BLAST of Cp4.1LG07g07420 vs. TrEMBL
Match: A0A0J8CQC7_BETVU (Lysine--tRNA ligase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057520 PE=3 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 1.4e-185
Identity = 358/592 (60.47%), Postives = 422/592 (71.28%), Query Frame = 1


Query: 10  SASATVDAVADSAPGSEE--TISKNARKKELKLKQKEEERRRKEELK--EKAKQEASQSK 69
           +A +  +   DS P S+E  T+SKNA KK+LK KQKEEERR+KEE K  ++A   +SQ +
Sbjct: 8   AAKSVANLSMDSNPNSQESETLSKNALKKQLKNKQKEEERRKKEEEKAAKQAAMPSSQGQ 67

Query: 70  KSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDHL 129
           KS   DDE+MDPTQYFENR+K+L +QKA G NPYPHKF V++S+  YIEKYG LNNGDHL
Sbjct: 68  KSQVADDEDMDPTQYFENRVKFLDAQKAAGINPYPHKFHVTLSIAGYIEKYGGLNNGDHL 127

Query: 130 EEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRGD 189
           E+V  SLAGRIMSKR+SSSKL FYDLHGSGAK+QVMADAR S+LDE EF++ HASVKRGD
Sbjct: 128 EDVQVSLAGRIMSKRASSSKLFFYDLHGSGAKVQVMADARTSDLDEVEFSKFHASVKRGD 187

Query: 190 IVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTRN 249
           IVGVTG+PGK+KRGELSIFPKSF+ LSHCLHMMP+QKA + SENAN+KK D+W PG TRN
Sbjct: 188 IVGVTGYPGKSKRGELSIFPKSFVELSHCLHMMPRQKAGAASENANVKKGDSWVPGSTRN 247

Query: 250 PETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMI 309
           PE YILKDQETRYRQRYLDLMLN EVR+IF+TR++VI Y+R+FLDD  F+EVETPMMNMI
Sbjct: 248 PELYILKDQETRYRQRYLDLMLNGEVREIFRTRSRVISYIRRFLDDRGFIEVETPMMNMI 307

Query: 310 AGGAAAR---------------------MVKELTGGYKVKYHSNG--LDNDPIEIDFTPP 369
            GGAAAR                      +KEL  G   + +  G    N+ I++   P 
Sbjct: 308 PGGAAARPFMTYHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPE 367

Query: 370 FRRI----------DMIEELEKMANLNIPKNLASDEANKY----LREACLKFEIKCP--- 429
           F             D++E  E+M +  + K L      KY    L +  ++ +   P   
Sbjct: 368 FTTCEFYEAFADYNDIMERTEEMLS-GMVKELTGGYVIKYHANGLDKEPIEIDFTPPFRR 427

Query: 430 ----------------------------------------PPETTARLLDKLVGHFLEET 489
                                                   PP+TT RLLDKLVGHFLEET
Sbjct: 428 IDMIEGLEKVANLSIPKDLASEETNKYLIEACAKYDVKCPPPQTTTRLLDKLVGHFLEET 487

Query: 490 CVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQ 518
           CVNP+FIINHP+IMSPLAKWHR++P LTERFELF+NKHE+CNAYTELNDPVVQRQRFAEQ
Sbjct: 488 CVNPSFIINHPQIMSPLAKWHRSKPGLTERFELFVNKHELCNAYTELNDPVVQRQRFAEQ 547

[Close]

BLAST of Cp4.1LG07g07420 vs. TrEMBL
Match: A0A0B0P2D6_GOSAR (Lysine--tRNA ligase OS=Gossypium arboreum GN=F383_05843 PE=3 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 4.5e-184
Identity = 369/595 (62.02%), Postives = 418/595 (70.25%), Query Frame = 1


Query: 9   GSASATVDAVADSAPGSE---ETISKNARKKELKLKQKEEERRRKEE---LKEKAKQEAS 68
           GS   T  AV+D A  S    ET SKNARKKELK KQ+EEERRRKEE    K+ A + ++
Sbjct: 3   GSVEETAKAVSDLALDSSAAGETQSKNARKKELKNKQREEERRRKEEEKAAKQAAAKAST 62

Query: 69  QSKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNG 128
           QS+K  A DDE+MDPTQ+ ENRLK+LA+QKA+GKNPYPHKF  SMS++EYI+KYG L NG
Sbjct: 63  QSQKHAAADDEDMDPTQFHENRLKFLAAQKAEGKNPYPHKFFTSMSIVEYIDKYGSLGNG 122

Query: 129 DHLEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVK 188
           +H+E+ + SLAGRIMSKR+SSSKL FYDLHGSGAK+QVMADA  S LDEAEFA+ H++VK
Sbjct: 123 EHIEDATVSLAGRIMSKRASSSKLFFYDLHGSGAKVQVMADASKSGLDEAEFAKFHSTVK 182

Query: 189 RGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGC 248
           RGDIVGVTGFPGKTKRGELSIFPKSF+VLSHCLHMMP+QKA     +A++KK D W PG 
Sbjct: 183 RGDIVGVTGFPGKTKRGELSIFPKSFLVLSHCLHMMPRQKA---GPDASVKKTDVWIPGS 242

Query: 249 TRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMM 308
           TRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTR+K+I YVR FLD+LDFLEVETPMM
Sbjct: 243 TRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRSKIISYVRSFLDNLDFLEVETPMM 302

Query: 309 NMIAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDNDPIEIDF 368
           NMIAGGAAAR                      +KEL  G   + +  G    N+ I++  
Sbjct: 303 NMIAGGAAARPFVTHHNELNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTH 362

Query: 369 TPPFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREA--CLKFEIKCPPP 428
            P F             D++E  EKM +  + K L      KY          EI   PP
Sbjct: 363 NPEFTTCEFYMAFADYNDLMELTEKMLS-GMVKELTGSYKIKYHANGLDSAPIEIDFTPP 422

Query: 429 ----------ETTARLL-----------------------------------DKLVGHFL 488
                     E  A L                                    DKLVGHFL
Sbjct: 423 FRRLDMVEELEKMANLNIPKDFSSDETNKYLADACAKLEIKCPPPQTTARLLDKLVGHFL 482

Query: 489 EETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRF 518
           EETCVNP FIINHPEIMSPLAKWHR++P LTERFELFINKHE+CNAYTELNDPVVQRQRF
Sbjct: 483 EETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRF 542

[Close]

BLAST of Cp4.1LG07g07420 vs. TAIR10
Match: AT3G11710.1 (AT3G11710.1 lysyl-tRNA synthetase 1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.5e-111
Identity = 213/304 (70.07%), Postives = 251/304 (82.57%), Query Frame = 1


Query: 11  ASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELK-EKAKQEA-SQSKKSV 70
           +S T++A   SA       SKNA KKE K+KQKEEE+RRK+E K EKAKQ   + S+K+V
Sbjct: 19  SSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDEEKAEKAKQAPKASSQKAV 78

Query: 71  AVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDHLEEV 130
           A DDEEMD TQY+ENRLKYLA++KA G+NPYPHKF VSMS+ +YIE YG LNNGDH+E  
Sbjct: 79  AADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIPKYIETYGSLNNGDHVENA 138

Query: 131 SESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRGDIVG 190
            ESLAGRIMSKRSSSSKL FYDLHG   K+QVMADA  S LDEAEF +LH++ KRGDIVG
Sbjct: 139 EESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLDEAEFLKLHSNAKRGDIVG 198

Query: 191 VTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTRNPET 250
           V GFPGKTKRGELSIFP+SFI+LSHCLHMMP++     ++N N KK + W PG TRNPE 
Sbjct: 199 VIGFPGKTKRGELSIFPRSFILLSHCLHMMPRK-----ADNVNAKKPEIWVPGQTRNPEA 258

Query: 251 YILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGG 310
           Y+LKDQE+RYRQR+LD++LN+EVRQIF+TRAK+I YVR+FLD+ +FLEVETPMMNMIAGG
Sbjct: 259 YVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMMNMIAGG 317

Query: 311 AAAR 313
           AAAR
Sbjct: 319 AAAR 317

[Close]

BLAST of Cp4.1LG07g07420 vs. TAIR10
Match: AT3G13490.1 (AT3G13490.1 Lysyl-tRNA synthetase, class II)

HSP 1 Score: 119.0 bits (297), Expect = 9.1e-27
Identity = 77/214 (35.98%), Postives = 109/214 (50.93%), Query Frame = 1


Query: 330 LDNDPIEIDFTPPFRRIDMIEELEKMANLNIPKNLASDEANKYLREACLKFEIKCPPPET 389
           +D    EI    P+RR  M   ++++  +N  + L  D  N          ++  P  ++
Sbjct: 379 IDYQGTEICLERPWRRETMHNLVKEITGINFSE-LGEDLGNAKDTVLLALQDVLEPKDKS 438

Query: 390 TARLLDKLVGHFLEET--------CVNPAFIINHPEIMSPLAKWHRARPSLTERFELFIN 449
             R    L GH L E          V P F++++P  +SPLAK HR    LTERFELFI 
Sbjct: 439 GIRACSSL-GHLLNEIFEVVVEPKLVQPTFVLDYPIEISPLAKPHRGNAGLTERFELFIC 498

Query: 450 KHEVCNAYTELNDPVVQRQRFAEQLKD------------------RQSGDDEA--MALDE 509
             E+ NA++EL DPV QR R  EQ++                   +   DDE+  + LDE
Sbjct: 499 GREMANAFSELTDPVDQRTRLEEQVRQHNAKRAEAVRESPEPNAKKDDDDDESYEVTLDE 558

Query: 510 TFCTSLDYGLPPTGGWGMGIDRLAMLLTDSQNIK 516
            F T+L+YG+PP  G G+GIDRL MLLT+S +I+
Sbjct: 559 DFLTALEYGMPPASGMGLGIDRLVMLLTNSASIR 590

[Close]

BLAST of Cp4.1LG07g07420 vs. TAIR10
Match: AT3G30805.1 (AT3G30805.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 2.4e-19
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 468 DRQSGDDEAMALDETFCTSLDYGLPPTGGWGMGIDRLAMLLTDSQNIK 516
           DRQSGDDEAMA+DETFC +L+YGLPPTGGWGMGIDR  MLLTDSQNIK
Sbjct: 71  DRQSGDDEAMAMDETFCMALEYGLPPTGGWGMGIDRPLMLLTDSQNIK 118

[Close]

BLAST of Cp4.1LG07g07420 vs. NCBI nr
Match: gi|976903580|gb|KVH91426.1| (Aminoacyl-tRNA synthetase, class II (D/K/N) [Cynara cardunculus var. scolymus])

HSP 1 Score: 768.5 bits (1983), Expect = 8.1e-219
Identity = 387/515 (75.15%), Postives = 430/515 (83.50%), Query Frame = 1


Query: 21  SAPGSEETISKNARKKELKLKQKEEERRRKEELKEK--AKQEASQSKKSVAVDDEEMDPT 80
           SA    E +SKNARKKELK KQKEEERRRKEE KEK  A    S ++K  A DDE+MDPT
Sbjct: 33  SASSEPEVVSKNARKKELKNKQKEEERRRKEEEKEKKAASMPKSATQKQSAADDEDMDPT 92

Query: 81  QYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDHLEEVSESLAGRIMS 140
           QYF+NRLK LA+ KA G NPYPHKF VSMS+LEYIEKY  LN+GDHLE+V  SLAGR+M+
Sbjct: 93  QYFDNRLKALAAHKAAGMNPYPHKFHVSMSILEYIEKYESLNSGDHLEDVQVSLAGRLMN 152

Query: 141 KRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRGDIVGVTGFPGKTKR 200
           KRSSSSKL FYDLHGSG K+QVMADAR S+LDEAEF++ H+ VKRGDIVG+ GFPGK+KR
Sbjct: 153 KRSSSSKLFFYDLHGSGGKVQVMADARRSDLDEAEFSKYHSGVKRGDIVGIVGFPGKSKR 212

Query: 201 GELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTRNPETYILKDQETRY 260
           GELSIFPKSF VLSHCLHMMP+QK+A+ ++NAN KK D W PG  RNPE YILKDQETRY
Sbjct: 213 GELSIFPKSFTVLSHCLHMMPRQKSAAVADNANTKKVDVWTPGSGRNPEAYILKDQETRY 272

Query: 261 RQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAAR------ 320
           RQRYLDLM+N EVR IFKTRAKV+ Y+R+FLD+LDFLEVETPMMNMIAGGAAAR      
Sbjct: 273 RQRYLDLMVNSEVRHIFKTRAKVVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHH 332

Query: 321 ---------------------------MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRR 380
                                      MVKELTGGY +KYH+NGLDNDPI+IDFTPPFRR
Sbjct: 333 NDLNMRLFMRIAPELYLKELVVGGLERMVKELTGGYVIKYHANGLDNDPIQIDFTPPFRR 392

Query: 381 IDMIEELEKMANLNIPKNLASDEANKYLREACLKFEIKCPPPETTARLLDKLVGHFLEET 440
           IDMI ELE+M NL+IPK+LA DEANKYL EAC KF+IKCPPP+TTARLLDKLVGHFLEET
Sbjct: 393 IDMIGELERMXNLSIPKDLAGDEANKYLAEACTKFDIKCPPPQTTARLLDKLVGHFLEET 452

Query: 441 CVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQ 500
           CVNPAFIINHPEIMSPLAKWHR++P LTERFELFINKHE+ NAYTELNDPVVQRQRFA+Q
Sbjct: 453 CVNPAFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQ 512

[Close]

BLAST of Cp4.1LG07g07420 vs. NCBI nr
Match: gi|296089683|emb|CBI39502.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 687.2 bits (1772), Expect = 2.4e-194
Identity = 373/593 (62.90%), Postives = 426/593 (71.84%), Query Frame = 1


Query: 9    GSASATVDAVADSAP--GSEETISKNARKKELKLKQKEEERRRKEELKEKAKQEASQSK- 68
            G+A     A++D +    S ETISKNARKKELK+KQ+EEE++RKEE K K     S SK 
Sbjct: 920  GAAEEAAKAISDLSMDGSSSETISKNARKKELKMKQREEEKKRKEEEKVKQAAAVSSSKV 979

Query: 69   -KSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDH 128
             K +A DDE+MDPTQYFENR+KYLA+QKA GKNPYPHKF V++S+LEYIEKYG L+NGDH
Sbjct: 980  QKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIEKYGALSNGDH 1039

Query: 129  LEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRG 188
            LE+++ SLAGRIMSKRSSSSKL FYDLHG GAK+QVMADAR S++DEAEF+R H+ VKRG
Sbjct: 1040 LEDITVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSRFHSGVKRG 1099

Query: 189  DIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTR 248
            DIVGVTGFPGKTKRGELSIFPKSF+VLSHCLHMMP+QKA  GS+NAN+KK D W PG TR
Sbjct: 1100 DIVGVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAGPGSDNANVKKTDVWVPGSTR 1159

Query: 249  NPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNM 308
            NPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAK+I Y+R FLD+LDFLEVETPMMNM
Sbjct: 1160 NPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNM 1219

Query: 309  IAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDNDPIEIDFTP 368
            I GGAAAR                      +KEL  G   + +  G    N+ I++   P
Sbjct: 1220 IPGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP 1279

Query: 369  PFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREACLKFEIK-------- 428
             F             D++E  EKM +  + K L      KY      K  I+        
Sbjct: 1280 EFTTCEFYMAFADYNDVMELTEKMLS-GMVKELTGGYKIKYHANGLDKDPIEIDFTPPFR 1339

Query: 429  ---------------------------------------CPPPETTARLLDKLVGHFLEE 488
                                                   CPPP+TTARLLDKLVGHFLEE
Sbjct: 1340 RIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEE 1399

Query: 489  TCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAE 518
             CVNP FIINHPEIMSPLAKWHR++ SLTERFELF+NKHE+CNAYTELNDPVVQRQRFAE
Sbjct: 1400 ACVNPTFIINHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFAE 1459

[Close]

BLAST of Cp4.1LG07g07420 vs. NCBI nr
Match: gi|359487616|ref|XP_002279658.2| (PREDICTED: lysine--tRNA ligase-like [Vitis vinifera])

HSP 1 Score: 687.2 bits (1772), Expect = 2.4e-194
Identity = 373/593 (62.90%), Postives = 426/593 (71.84%), Query Frame = 1


Query: 9   GSASATVDAVADSAP--GSEETISKNARKKELKLKQKEEERRRKEELKEKAKQEASQSK- 68
           G+A     A++D +    S ETISKNARKKELK+KQ+EEE++RKEE K K     S SK 
Sbjct: 3   GAAEEAAKAISDLSMDGSSSETISKNARKKELKMKQREEEKKRKEEEKVKQAAAVSSSKV 62

Query: 69  -KSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGILNNGDH 128
            K +A DDE+MDPTQYFENR+KYLA+QKA GKNPYPHKF V++S+LEYIEKYG L+NGDH
Sbjct: 63  QKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIEKYGALSNGDH 122

Query: 129 LEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFARLHASVKRG 188
           LE+++ SLAGRIMSKRSSSSKL FYDLHG GAK+QVMADAR S++DEAEF+R H+ VKRG
Sbjct: 123 LEDITVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSRFHSGVKRG 182

Query: 189 DIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKNDAWAPGCTR 248
           DIVGVTGFPGKTKRGELSIFPKSF+VLSHCLHMMP+QKA  GS+NAN+KK D W PG TR
Sbjct: 183 DIVGVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAGPGSDNANVKKTDVWVPGSTR 242

Query: 249 NPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNM 308
           NPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAK+I Y+R FLD+LDFLEVETPMMNM
Sbjct: 243 NPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNM 302

Query: 309 IAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDNDPIEIDFTP 368
           I GGAAAR                      +KEL  G   + +  G    N+ I++   P
Sbjct: 303 IPGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP 362

Query: 369 PFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREACLKFEIK-------- 428
            F             D++E  EKM +  + K L      KY      K  I+        
Sbjct: 363 EFTTCEFYMAFADYNDVMELTEKMLS-GMVKELTGGYKIKYHANGLDKDPIEIDFTPPFR 422

Query: 429 ---------------------------------------CPPPETTARLLDKLVGHFLEE 488
                                                  CPPP+TTARLLDKLVGHFLEE
Sbjct: 423 RIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEE 482

Query: 489 TCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAE 518
            CVNP FIINHPEIMSPLAKWHR++ SLTERFELF+NKHE+CNAYTELNDPVVQRQRFAE
Sbjct: 483 ACVNPTFIINHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFAE 542

[Close]

BLAST of Cp4.1LG07g07420 vs. NCBI nr
Match: gi|225436215|ref|XP_002269584.1| (PREDICTED: lysine--tRNA ligase-like [Vitis vinifera])

HSP 1 Score: 686.8 bits (1771), Expect = 3.1e-194
Identity = 379/601 (63.06%), Postives = 433/601 (72.05%), Query Frame = 1


Query: 1   MAGSTEGLGSASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELKEKAKQE 60
           M G+ E   +A A +D   D +  S ET SKNARKKELK+KQ+EEE++RKEE  EKAKQ 
Sbjct: 1   MEGAAEE--AAKAILDLSVDGS--SSETTSKNARKKELKMKQREEEKKRKEE--EKAKQA 60

Query: 61  ASQS----KKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKY 120
           A+ S    +K +A DDE+MDPTQYFENR+KYLA+QKA GKNPYPHKF V++S+LEYI+KY
Sbjct: 61  AAVSSSKVQKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIKKY 120

Query: 121 GILNNGDHLEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFAR 180
           G L+NGDHLE+V+ SLAGRIMSKRSSSSKL FYDLHG GAK+QVMADAR S++DEAEF+R
Sbjct: 121 GALSNGDHLEDVTVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSR 180

Query: 181 LHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKND 240
            H+ VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMP+QKA  GS+NAN+KK D
Sbjct: 181 FHSGVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPGSDNANVKKTD 240

Query: 241 AWAPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLE 300
            W PG TRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAK+I Y+R FLD+LDFLE
Sbjct: 241 VWVPGSTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLE 300

Query: 301 VETPMMNMIAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDND 360
           VETPMMNMIAGGAAAR                      +KEL  G   + +  G    N+
Sbjct: 301 VETPMMNMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNE 360

Query: 361 PIEIDFTPPFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREACLKFEIK 420
            I++   P F             D++E  EKM +  + K L      KY      K  I+
Sbjct: 361 GIDLTHNPEFTTCEFYMAFADYNDVMELTEKMLS-GMVKELTGGYKIKYHANGLDKDPIE 420

Query: 421 -----------------------------------------------CPPPETTARLLDK 480
                                                          CPPP+TTARLLDK
Sbjct: 421 IDFTPPFRRIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDK 480

Query: 481 LVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPV 518
           LVGHFLEETCVNP FI NHPEIMSPLAKWHR++ SLTERFELF+NKHE+CNAYTELNDPV
Sbjct: 481 LVGHFLEETCVNPTFITNHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPV 540

[Close]

BLAST of Cp4.1LG07g07420 vs. NCBI nr
Match: gi|296090191|emb|CBI40010.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 686.8 bits (1771), Expect = 3.1e-194
Identity = 379/601 (63.06%), Postives = 433/601 (72.05%), Query Frame = 1


Query: 1   MAGSTEGLGSASATVDAVADSAPGSEETISKNARKKELKLKQKEEERRRKEELKEKAKQE 60
           M G+ E   +A A +D   D +  S ET SKNARKKELK+KQ+EEE++RKEE  EKAKQ 
Sbjct: 58  MEGAAEE--AAKAILDLSVDGS--SSETTSKNARKKELKMKQREEEKKRKEE--EKAKQA 117

Query: 61  ASQS----KKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKY 120
           A+ S    +K +A DDE+MDPTQYFENR+KYLA+QKA GKNPYPHKF V++S+LEYI+KY
Sbjct: 118 AAVSSSKVQKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIKKY 177

Query: 121 GILNNGDHLEEVSESLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMADARVSELDEAEFAR 180
           G L+NGDHLE+V+ SLAGRIMSKRSSSSKL FYDLHG GAK+QVMADAR S++DEAEF+R
Sbjct: 178 GALSNGDHLEDVTVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSR 237

Query: 181 LHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPKQKAASGSENANLKKND 240
            H+ VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMP+QKA  GS+NAN+KK D
Sbjct: 238 FHSGVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPGSDNANVKKTD 297

Query: 241 AWAPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLE 300
            W PG TRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAK+I Y+R FLD+LDFLE
Sbjct: 298 VWVPGSTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLE 357

Query: 301 VETPMMNMIAGGAAAR---------------------MVKELTGGYKVKYHSNG--LDND 360
           VETPMMNMIAGGAAAR                      +KEL  G   + +  G    N+
Sbjct: 358 VETPMMNMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNE 417

Query: 361 PIEIDFTPPFRRI----------DMIEELEKMANLNIPKNLASDEANKYLREACLKFEIK 420
            I++   P F             D++E  EKM +  + K L      KY      K  I+
Sbjct: 418 GIDLTHNPEFTTCEFYMAFADYNDVMELTEKMLS-GMVKELTGGYKIKYHANGLDKDPIE 477

Query: 421 -----------------------------------------------CPPPETTARLLDK 480
                                                          CPPP+TTARLLDK
Sbjct: 478 IDFTPPFRRIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDK 537

Query: 481 LVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPV 518
           LVGHFLEETCVNP FI NHPEIMSPLAKWHR++ SLTERFELF+NKHE+CNAYTELNDPV
Sbjct: 538 LVGHFLEETCVNPTFITNHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPV 597

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYKC_ARATH	6.2e-110	70.07	Lysine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g11710 PE=1 SV=1	[more]
SYK_ORYSJ	9.2e-106	71.26	Lysine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os03g0586800 PE=2 SV=1	[more]
SYK_SOLLC	1.9e-90	72.68	Lysine--tRNA ligase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1	[more]
SYK_HUMAN	2.6e-76	53.23	Lysine--tRNA ligase OS=Homo sapiens GN=KARS PE=1 SV=3	[more]
SYK_CRIGR	2.6e-76	53.23	Lysine--tRNA ligase OS=Cricetulus griseus GN=KARS PE=1 SV=1	[more]

BLAST of Cp4.1LG07g07420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A103XII3_CYNCS	5.6e-219	75.15	Aminoacyl-tRNA synthetase, class II (D/K/N) OS=Cynara cardunculus var. scolymus ...	[more]
F6I4L4_VITVI	1.7e-194	62.90	Lysine--tRNA ligase OS=Vitis vinifera GN=VIT_14s0060g02350 PE=3 SV=1	[more]
F6I5G4_VITVI	2.2e-194	63.06	Lysine--tRNA ligase OS=Vitis vinifera GN=VIT_15s0024g00700 PE=3 SV=1	[more]
A0A0J8CQC7_BETVU	1.4e-185	60.47	Lysine--tRNA ligase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057520 PE=3 SV=1	[more]
A0A0B0P2D6_GOSAR	4.5e-184	62.02	Lysine--tRNA ligase OS=Gossypium arboreum GN=F383_05843 PE=3 SV=1	[more]

BLAST of Cp4.1LG07g07420 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11710.1	3.5e-111	70.07	lysyl-tRNA synthetase 1	[more]
AT3G13490.1	9.1e-27	35.98	Lysyl-tRNA synthetase, class II	[more]
AT3G30805.1	2.4e-19	87.50	Class II aminoacyl-tRNA and biotin synthetases superfamily protein	[more]

BLAST of Cp4.1LG07g07420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|976903580\|gb\|KVH91426.1\|	8.1e-219	75.15	Aminoacyl-tRNA synthetase, class II (D/K/N) [Cynara cardunculus var. scolymus]	[more]
gi\|296089683\|emb\|CBI39502.3\|	2.4e-194	62.90	unnamed protein product [Vitis vinifera]	[more]
gi\|359487616\|ref\|XP_002279658.2\|	2.4e-194	62.90	PREDICTED: lysine--tRNA ligase-like [Vitis vinifera]	[more]
gi\|225436215\|ref\|XP_002269584.1\|	3.1e-194	63.06	PREDICTED: lysine--tRNA ligase-like [Vitis vinifera]	[more]
gi\|296090191\|emb\|CBI40010.3\|	3.1e-194	63.06	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation

Vocabulary: **INTERPRO**
Term	Definition
IPR018150	Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR012340	NA-bd_OB-fold
IPR004365	NA-bd_OB_tRNA
IPR004364	aa-tRNA-synt_II

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009085	lysine biosynthetic process
biological_process	GO:0006430	lysyl-tRNA aminoacylation
biological_process	GO:0006418	tRNA aminoacylation for protein translation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004824	lysine-tRNA ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g07420.1	Cp4.1LG07g07420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004364	Aminoacyl-tRNA synthetase, class II (D/K/N)	PFAM	PF00152	tRNA-synt_2	coord: 326..518 score: 3.0E-30coord: 253..312 score: 2.6
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 131..208 score: 5.3
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	G3DSA:2.40.50.140		coord: 78..219 score: 3.9
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 74..219 score: 1.47
IPR018150	Aminoacyl-tRNA synthetase, class II (D/K/N)-like	PANTHER	PTHR22594	ASPARTYL/LYSYL-TRNA SYNTHETASE	coord: 10..224 score: 3.8E-269coord: 246..515 score: 3.8E
None	No IPR available	unknown	Coil	Coil	coord: 26..67 scor
None	No IPR available	GENE3D	G3DSA:3.30.930.10		coord: 251..315 score: 5.1E-18coord: 333..516 score: 6.4
None	No IPR available	PANTHER	PTHR22594:SF35	LYSINE--TRNA LIGASE	coord: 10..224 score: 3.8E-269coord: 246..515 score: 3.8E
None	No IPR available	unknown	SSF55681	Class II aaRS and biotin synthetases	coord: 253..516 score: 3.89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g07420	Cucsa.089220	Cucumber (Gy14) v1	cgycpeB0179
Cp4.1LG07g07420	CmaCh12G008900	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g07420	CmoCh05G007300	Cucurbita moschata (Rifu)	cmocpeB743
Cp4.1LG07g07420	CmoCh12G008980	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g07420	Cla022810	Watermelon (97103) v1	cpewmB814
Cp4.1LG07g07420	Csa2G059840	Cucumber (Chinese Long) v2	cpecuB811
Cp4.1LG07g07420	MELO3C004005	Melon (DHL92) v3.5.1	cpemeB777
Cp4.1LG07g07420	ClCG11G012010	Watermelon (Charleston Gray)	cpewcgB723
Cp4.1LG07g07420	CSPI02G06170	Wild cucumber (PI 183967)	cpecpiB812
Cp4.1LG07g07420	Lsi11G007690	Bottle gourd (USVL1VR-Ls)	cpelsiB654
Cp4.1LG07g07420	MELO3C004005.2	Melon (DHL92) v3.6.1	cpemedB913
Cp4.1LG07g07420	CsaV3_2G008510	Cucumber (Chinese Long) v3	cpecucB1005
Cp4.1LG07g07420	CsGy2G006320	Cucumber (Gy14) v2	cgybcpeB261
Cp4.1LG07g07420	Carg08383	Silver-seed gourd	carcpeB0089
Cp4.1LG07g07420	Carg24214	Silver-seed gourd	carcpeB1382

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g07420	Cp4.1LG11g06370	Cucurbita pepo (Zucchini)	cpecpeB150

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g07420	Cucurbita maxima (Rimu)	cmacpeB790
Cp4.1LG07g07420	Cucurbita moschata (Rifu)	cmocpeB140
Cp4.1LG07g07420	Wild cucumber (PI 183967)	cpecpiB807
Cp4.1LG07g07420	Cucumber (Chinese Long) v2	cpecuB807
Cp4.1LG07g07420	Bottle gourd (USVL1VR-Ls)	cpelsiB681
Cp4.1LG07g07420	Watermelon (Charleston Gray)	cpewcgB745
Cp4.1LG07g07420	Watermelon (97103) v1	cpewmB820
Cp4.1LG07g07420	Melon (DHL92) v3.5.1	cpemeB749
Cp4.1LG07g07420	Cucumber (Gy14) v2	cgybcpeB145
Cp4.1LG07g07420	Melon (DHL92) v3.6.1	cpemedB888
Cp4.1LG07g07420	Silver-seed gourd	carcpeB0848
Cp4.1LG07g07420	Cucumber (Chinese Long) v3	cpecucB0999
Cp4.1LG07g07420	Wax gourd	cpewgoB1018
Cp4.1LG07g07420	Wax gourd	cpewgoB1071
Cp4.1LG07g07420	Cucurbita pepo (Zucchini)	cpecpeB142
Cp4.1LG07g07420	Cucurbita pepo (Zucchini)	cpecpeB499
Cp4.1LG07g07420	Cucurbita maxima (Rimu)	cmacpeB163