Cp4.1LG07g05650 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g05650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Phytochrome
Location	Cp4.1LG07 : 4182080 .. 4188809 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTATTTCATATCAAATTTTAATACGTACTTTCTTTGTTGATTTGACGTTACGATTGAGTATAGTGGAAAGAATAGTCCATATTACGAGCAAGAATGGTCATATTACGAGCAACAATAAGCATTTTGTTTTTAGAAATATATAGAAAAGGTTGTTCTAAATATTTTGTTAATATTCTTTTTTTTTTTTACAACATAATAAAAATATAAACTTTATGTTATTTCAATGTAAATGTCGATATGTTGACAAAAAAAAGATTAATACTTTAGATTTTGTTGTTCTCAATATTTAATTTTTAATTTGAATTATATTATGTGTTATAAATTTGTTATATGTGTGTCTATATATATTGCTAATAATTTTATTTGAACTAAACAATGAGAAACAATTATTATTTCCAAGAAAGAAGGAAATGTTGGAAAAATCTTGGTTAGATTAGTCGGCAGATATTGTCTCTTTACATTTCTCTTGAAGGTTTTAAAAAGCTTCTACCCTCAACGTTTTTAAACGCTTCTGCTCTCAAGGTTTTTAAAACGTGTCTGTTAGGGAGAAGTTTCCACACCCTTATAAAAATGTGTGCTCTCCTCCCCGGCCAACGTGGGATCTCGCAATCTATTCCTTCGAGGTCAAACGTCCTCTCTAGCACTCATTCCCTTTTTCAATCGATGTGGGACCCTCCAATCCACCCTCCCTTCTGGGCCCAATGTCCTTGCTGGCACACCACCTTGTGTCCATCCCCTTCGAGGCTCAGCCTTCTCGTCGGCACATTGCCCGGTGTTTGGCTCTGGCACAATTTGTAACATCTTAAGCCCACCGTTAGTAGATATTGTCCTCTTTGAGTTTTTCCTTTCGGGTTTTCTCTCAAAGTTTTTAAAATGTGTCAACAGGGGGCGGTTTTCATACCCTTGTAACGAGGTGGGATCTCACATGATCTAGTAATCTGAGTTTTCACACCCTCGATGTGGGATCTCACATGATCCTAATAATTCGAGTTTTCCCACCCTTGTAATGATTTGGGATCTCACATGATCCTAGTAATTCAAATAAATTCCACAACCAAACTGAACCCAAACCAACCATCTATTTTAGAGTTCTCCATTGAATTGGTTTGTGATTTGATTACATATTTTACGTAGATTCAACGTCTAAATCATTTGTGTTAAGGCTTAATTGAATATCAATATTTATATAACTAAACAAATCATTGATTTTGGCTTTTGTTTTCCGAACAAGAACAGAAACAAGAACAAGAACGAGAACAAAGATGTCGTCGAGTAGACCGAGCGAGTCCACAAACACAGGAGGATCCTCCTCCTCCTCTTCACAATCAAGACACACTTCAAGAATTCTCACTCAAACCTCCATAGATGCAAAGCTCCACTCCCACTTCCAACACTCCACTTCTTCATTCGACTACTCTACTTCAATCCATCTCACAGCCAACCCACCATCAACCACCACCACCCCCACCACCACCGCCTACCTCCACCACATCCAACGCTCCAACCTCATCCAACCCTTCGGCTGCCTCATAGCCCTCCACCCAACCACCCACAAACTCATCGCCTTCAGCCAAAACGCCCCTGAATTCCTCACCACAGTCTCCCACACCGTCCCCACCATCTCCGACCGCCCCGTCCTCGCCTTCGGCACCACCCTCCATTCCATCTTCACCCCTCCCACCGCCACAGCCCTCCTCAAAGCTCTAGCCTTTCCCGACGTCACTCTCCTCAACCCCATTCTCGTCCACTCCAAATCCTCACAAAAACCCTTCTACGCCATTCTCCACCGTGTCACCGGTAGCCTCATCATCGACTTCGAACCCGTCAACCCCGACGAAGTCCCCGTCACCGCAGCCGGTGCTCTCCAATCATATAAACTCGCAGCCAAAGCCATCACTCGCCTCCAAGCTCTCCCTAGTGGAAGCATGGCCAGGCTTTGTGACACCATGGTTCAAGAAGTGTTTGAACTCACAGGATATGATCGAGTCATGGCATATAAATTCCATGATGATGATCATGGGGAGGTGTTCTCTGAGGTTACAAAGCCTGGACTTGACCCATATCTTGGATTGCATTATCCAGCCACTGACATCCCACAAGCTGCAAGGTTCTTATTCATGAAGAACAAGGTTAGAATGATTGTGGACTGCAAAGCCAAACATGTCAAGGTGATTCAAGACCCAAATCTTGAGTTTGATTTGACATTATGTGGGTCAACATTGAGAGCTCCTCATAGTTGCCATTTACAATACATGGAGAATATGGATTCAATTGCATCTTTAGTTATGGCAATTGTGGTGAATGAGGAAGAACATGAAGAACAATTTGATCATAAGAACAAGAGAAAAAGATTATGGGGTTTGGTGGTTTGTCATAACACAACTCCAAGATTTGTTCCATTTCCTCTTAGATATGCATGTGAGTTTCTAGCTCAAGTGTTTGCAATTCATGTCAACAAAGAATTGGAATTGGAGAATCAAATTTTGGAGAAGAACATCTTAAGAACTCAAACGCTTTTGTGTGATATGTTGATGCGTGATGCACCATTAGGGATTGTGTCAAGGAGCCCTAATATAATGGATCTTGTGAAGTCAGATGGGGCTGCATTGTTGTACAATGATAAGGTATGGAGATTAGGGATGACTCCTAATGATTTTGAGCTTCATGATATTGCTTCATGGATTTTGGAGTATCATGTGGATTCGACTGGATTGAGTACGGATAGCTTGTACGATGCGGGGTATCACGGCGCGGTTGCTCTAGGAGACGGCGTGTGTGGGATGGCGGCGGTGAGGCTAGGTTTCAACGACATGATTTTTTGGTTCCGATCGCATGCTGCATCGGAGATTAGGTGGGGCGGGGCGAAGCATGAGGCGGGTGAGAAGGATGATGGAAGGAGAATGCATCCTAGGTCATCTTTCAAGGCTTTTCTTGAAGTGGTTAAGACAAGGAGTTTGCCTTGGAAGGACTTTGAAATGGATGCTATTCATTCTTTGCAACTTATACTAAGAAACACTTATAAAGATAAAGAGATTAATAGAAGTTCAATACAATCAACACTTAGTGACCTGAAGATTGATGGGAGGCAAGAAATTGAATCAGTGACATGTGAGATGGTGAGGTTGATTGAAACGGCTAGTGTTCCAATTTTGGCTGTTGATGTGGATGGGCTTGTTAATGGGTGGAACTCAAAAATTGCTGAATTGACTGGAATTTGTGTTGATAAGGCTATTGGCAAGCATTTGTTGACATTGGTGGAAGATTCTTCATTGGAAACTGTGAAGAAGATGTTGTTCTTGGCATTGCAAGGTAAATTTTGATTTTATTCGTTAAACATTTACCAGGTTAGGAATCACGACTCTCCACAATAGTATGATATTGTCCATTTTGAGCTAAGCTCTCGTGGCTTTGCTTTGGGTTTTCCCCAAAGGCCTCGTAGCAATGGAAATGTATTCCTTACTTACAAACCCATGATCATTCCCTAAATCAGGTCAACGTGGGACTCCCTCCCAACAATCCTCCCCTAGAACAAAGTACACTATAGAGCCTCCCCTGAGACCTATGAAGCCCTCGAACAACCTCCTCTTAATCGAGGCTCGACTCCTTCCTCCCCTGAGACCTATGAAGCCCTCGAACAACCTCCTCTTAATCGAGGCTCGACTCCTTCTCTGAAGTTCTCGAACAAAGTACACCTTTTGTTCGGCACTTGAGTCACTTTTGACTACACCTTCAAGGGTCCTGCCTTCTTTATTCGATATTTGAGGATTCTATTGACATGGCTAAGTTGAGGGCATGACTCTTATACCATGTTAGGAATCACGAATCTCCACAATGGTATGATATTATCCACTTTGAGCATAAGCTTTCATGGTTTTGCTTTGGTCTTTCTCAAAAGGTCTCATATCAGTGGAGATGTATTCCTTACCTATAAACCCATGATATTCCTCTTAATTAGCCGATGTGGGACTCTCAACCAACTATCCTCAACAATCCTCCCCTCGAACAAAGTACACTATAGAGCCTCCCTTGAGGCATATGAAGCCCTCAAACAGCCTCCCCTTAATCGAGGATCGACTCCTTCTCCAGAGTGTTCGAACAAAGTACACTCTTTGTTCAACACTTGAGTCACTTTTGACTCAACATTTGAGGATTCTATTGACATGGCTAAATTAAGGGCATGACTCTGATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCATTTTGAGCCTAAGCTCTCATGACTTACCAATGGAGGTGTATTCCTTACTTATAAACCCTCGATCATTCCCTGAATCAGCCAACATGAGACTCCCTCCCAACAATCCTTGAACACACAAACCCATTAACTTTTGTGCTCTCTCTCATCAGGCCAAGAGGAGAAAAACGTCCAATTTGAGATAAAAACACAAGGCTCACACATGGAATCAAGCTCAATCAGCCTAATAGTAAATGCATGTGCAAGCAAAGACTTATGTGAGAACGTAGTGGGAGTATGCTTCGTAGCACAAGACATCACACATGAAAAGAAAGTAATGGACAAGTTCACAAAATTACAAGGCGATTACAAAGCCATAGTACAAAACCCCAACCCACTAATCCCTCCAATATTTGGGGTAGACGAATTTGGTTGGTGCACAGAGTGGAACTTAGCAATGGAAAATCTAAGTGGATGGTCAAGAGAAGAAGTGGTCAACAAGATGCTTTTGGGGGAAGTTTTTGGGTCATGCTGCCATCTAAAGAACCAAGAAGCCTTTGTGAATCTTGGGATTGTTTTGAACAATGCCATGAGTGGCCAAGATTCTGATAAGATATCATTTGGGTTCTTTGGTAGAAATGGGATGTTTGTGGAATGTCTTGTTTGTGTGAATAAGATAATGGATAGAGATGGGGAAGTGATTGGGGTTTTTTGCTTCTTGCAGCTTGCTAGCCAAGAGCTGCAACAAGCTTTGAATGTTCAAAAGTTGTGTGAGAGAACGGCTTTGAAAAGGTTGAAGGCTTTGGGATATATTAAGAGGCAGATCCAAAATCCTCTTTGTGGGATTGTTTTTACGAGTAAAATGTTGGAGAGCTCTCAGTTGGGTGATGAACAGAACCAGCTTTTGCTTAATAGTGGTGATTGTCAAAGGCAGATCTTTAAGGTTCTTCATGATTCGGATGATCTTGATAAGATTATTGAAGGGTATGTGTTTTTTTCTTCTCTTTTTTAATTACTTTTTTTAAGAATTTGGTTTTTTATGGCTCAACGGTTAGGAATCACGAATCTCTCTAATGATATGATATTGTCCACTTTGAGTATAAGCTCTCGTAGCTTTGCTTTTGGTTTCTCCAAACGGTCTCATGCCAATGGAGACGTATTCCTTACCTATAAACCAATGATCATCGCTTAATTAGCGGATGAGGGACTCCCCACCAACTATCCTTAAGAATCCTTCCCTTGAACAAAGTATACCATAGAGCCTTCCCTGAGGCCTATGGAGCCCTCGAATAGTCTCCCCTTAATTGAGGCTCGACTCCTTACTCTGGTGCCCTCGAACAAAGTACACCCTTTGCTCGACACTTGAGTCACTTTTTTATGACACCTTCGAGACTCATAATTTCTTTGTTTAACATTTGAGAATTTTATTGACATGACTGAGTTAACGGTATGACTCTAAATATTGTCCACTTTGATCATAAGCTCTCGTGGCTTTGCTTTTGCTTTCTCCAAAAGGTCTCATGCTAATGGAGATATATTCCTTACTTATAAACTTGTGATCATCCCTCTTAATTAGTCAATGTGGGACTTCCCACTAACTATCTTCAACAATTATCTCCTCGAACAAAGTATACCATAGAGCCTCCTCTAAGGCCTATGGAGCCCTCAAACAGTCTCCCCTTAATTGAGCTTCGACTCTTTTCTCTAGTGTCCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTCACTTTTTTACGACATCTTTGAGGCTCACAACTTCTTTCTTCGACATTTAAGAAGTTTATTGACATGGCTAAGTTAAAGACATGACTCTGATACCATGTTAGTGATTACGAACTTGAACGTCAACTAATGTTTTCCATATTTGGATGCCTTTGTTCTTACGTAGTTAAGTAACATCTTTGTGGGTATTGGTTGACAGCTTCATTGATTTAGAAATGGTTGAGTTCTCATTACATGAAGCATTAGTGGTATCAATTAGTCAAGTAATGATGAAGAGCAAAGGCAAAGGTATCCAAATAGTAAACGAGGTAGCAGAAGAGATCATGTCCGAGACCTTATATGGAGACAGTTTGAGACTTCAACAAGTAATGGCTGATTTCTTGTTGATATCAGTAAATTACGCACCAACAGGAAGCAGCCTTATGCTTTCAACAAAGTTGACAAAGGATCAATCAGGGAAGTCAGTGAATCTTGTGCATGTGGAGTTCAGGTACAATAATCTAACAATGATTCAATGAAGAACATGTTCTTTGCTGAATTTGATGTGTTGTTTTTGTGGTGATTTAGGATAACATATGTCGGTGGTGGCATGCCAGAATCATTGTTGAATGAGATGTTTGGGAACGATGAGGAGGCGTCTGATGAAGGTTTTAGCCTTCTCGTGAGTAGAAAGTTGGTGAAGTTGATGAATGGAGAGGTGAGATATGTGAGGGAAGCAGCCAACTCAACCTTCATCATAACACTTCAGCTTGCTGCAGCTCATAAATAG

mRNA sequence

ATGGGAACAGAAACAAGAACAAGAACGAGAACAAAGATGTCGTCGAGTAGACCGAGCGAGTCCACAAACACAGGAGGATCCTCCTCCTCCTCTTCACAATCAAGACACACTTCAAGAATTCTCACTCAAACCTCCATAGATGCAAAGCTCCACTCCCACTTCCAACACTCCACTTCTTCATTCGACTACTCTACTTCAATCCATCTCACAGCCAACCCACCATCAACCACCACCACCCCCACCACCACCGCCTACCTCCACCACATCCAACGCTCCAACCTCATCCAACCCTTCGGCTGCCTCATAGCCCTCCACCCAACCACCCACAAACTCATCGCCTTCAGCCAAAACGCCCCTGAATTCCTCACCACAGTCTCCCACACCGTCCCCACCATCTCCGACCGCCCCGTCCTCGCCTTCGGCACCACCCTCCATTCCATCTTCACCCCTCCCACCGCCACAGCCCTCCTCAAAGCTCTAGCCTTTCCCGACGTCACTCTCCTCAACCCCATTCTCGTCCACTCCAAATCCTCACAAAAACCCTTCTACGCCATTCTCCACCGTGTCACCGGTAGCCTCATCATCGACTTCGAACCCGTCAACCCCGACGAAGTCCCCGTCACCGCAGCCGGTGCTCTCCAATCATATAAACTCGCAGCCAAAGCCATCACTCGCCTCCAAGCTCTCCCTAGTGGAAGCATGGCCAGGCTTTGTGACACCATGGTTCAAGAAGTGTTTGAACTCACAGGATATGATCGAGTCATGGCATATAAATTCCATGATGATGATCATGGGGAGGTGTTCTCTGAGGTTACAAAGCCTGGACTTGACCCATATCTTGGATTGCATTATCCAGCCACTGACATCCCACAAGCTGCAAGGTTCTTATTCATGAAGAACAAGGTTAGAATGATTGTGGACTGCAAAGCCAAACATGTCAAGGTGATTCAAGACCCAAATCTTGAGTTTGATTTGACATTATGTGGGTCAACATTGAGAGCTCCTCATAGTTGCCATTTACAATACATGGAGAATATGGATTCAATTGCATCTTTAGTTATGGCAATTGTGGTGAATGAGGAAGAACATGAAGAACAATTTGATCATAAGAACAAGAGAAAAAGATTATGGGGTTTGGTGGTTTGTCATAACACAACTCCAAGATTTGTTCCATTTCCTCTTAGATATGCATGTGAGTTTCTAGCTCAAGTGTTTGCAATTCATGTCAACAAAGAATTGGAATTGGAGAATCAAATTTTGGAGAAGAACATCTTAAGAACTCAAACGCTTTTGTGTGATATGTTGATGCGTGATGCACCATTAGGGATTGTGTCAAGGAGCCCTAATATAATGGATCTTGTGAAGTCAGATGGGGCTGCATTGTTGTACAATGATAAGGTATGGAGATTAGGGATGACTCCTAATGATTTTGAGCTTCATGATATTGCTTCATGGATTTTGGAGTATCATGTGGATTCGACTGGATTGAGTACGGATAGCTTGTACGATGCGGGGTATCACGGCGCGGTTGCTCTAGGAGACGGCGTGTGTGGGATGGCGGCGGTGAGGCTAGGTTTCAACGACATGATTTTTTGGTTCCGATCGCATGCTGCATCGGAGATTAGGTGGGGCGGGGCGAAGCATGAGGCGGGTGAGAAGGATGATGGAAGGAGAATGCATCCTAGGTCATCTTTCAAGGCTTTTCTTGAAGTGGTTAAGACAAGGAGTTTGCCTTGGAAGGACTTTGAAATGGATGCTATTCATTCTTTGCAACTTATACTAAGAAACACTTATAAAGATAAAGAGATTAATAGAAGTTCAATACAATCAACACTTAGTGACCTGAAGATTGATGGGAGGCAAGAAATTGAATCAGTGACATGTGAGATGGTGAGGTTGATTGAAACGGCTAGTGTTCCAATTTTGGCTGTTGATGTGGATGGGCTTGTTAATGGGTGGAACTCAAAAATTGCTGAATTGACTGGAATTTGTGTTGATAAGGCTATTGGCAAGCATTTGTTGACATTGGTGGAAGATTCTTCATTGGAAACTATAAAAACACAAGGCTCACACATGGAATCAAGCTCAATCAGCCTAATAGTAAATGCATGTGCAAGCAAAGACTTATGTGAGAACGTAGTGGGAGTATGCTTCGTAGCACAAGACATCACACATGAAAAGAAAGTAATGGACAAGTTCACAAAATTACAAGGCGATTACAAAGCCATAGTACAAAACCCCAACCCACTAATCCCTCCAATATTTGGGGTAGACGAATTTGGTTGGTGCACAGAGTGGAACTTAGCAATGGAAAATCTAAGTGGATGGTCAAGAGAAGAAGTGGTCAACAAGATGCTTTTGGGGGAAGTTTTTGGGTCATGCTGCCATCTAAAGAACCAAGAAGCCTTTGTGAATCTTGGGATTGTTTTGAACAATGCCATGAGTGGCCAAGATTCTGATAAGATATCATTTGGGTTCTTTGGTAGAAATGGGATGTTTGTGGAATGTCTTGTTTGTGTGAATAAGATAATGGATAGAGATGGGGAAGTGATTGGGGTTTTTTGCTTCTTGCAGCTTGCTAGCCAAGAGCTGCAACAAGCTTTGAATGTTCAAAAGTTGTGTGAGAGAACGGCTTTGAAAAGGTTGAAGGCTTTGGGATATATTAAGAGGCAGATCCAAAATCCTCTTTGTGGGATTGTTTTTACGAGTAAAATGTTGGAGAGCTCTCAGTTGGGTGATGAACAGAACCAGCTTTTGCTTAATAGTGGTGATTGTCAAAGGCAGATCTTTAAGGTTCTTCATGATTCGGATGATCTTGATAAGATTATTGAAGGCTTCATTGATTTAGAAATGGTTGAGTTCTCATTACATGAAGCATTAGTGGTATCAATTAGTCAAGTAATGATGAAGAGCAAAGGCAAAGGTATCCAAATAGTAAACGAGGTAGCAGAAGAGATCATGTCCGAGACCTTATATGGAGACAGTTTGAGACTTCAACAAGTAATGGCTGATTTCTTGTTGATATCAGTAAATTACGCACCAACAGGAAGCAGCCTTATGCTTTCAACAAAGTTGACAAAGGATCAATCAGGGAAGTCAGTGAATCTTGTGCATGTGGAGTTCAGGATAACATATGTCGGTGGTGGCATGCCAGAATCATTGTTGAATGAGATGTTTGGGAACGATGAGGAGGCGTCTGATGAAGGTTTTAGCCTTCTCGTGAGTAGAAAGTTGGTGAAGTTGATGAATGGAGAGGTGAGATATGTGAGGGAAGCAGCCAACTCAACCTTCATCATAACACTTCAGCTTGCTGCAGCTCATAAATAG

Coding sequence (CDS)

ATGGGAACAGAAACAAGAACAAGAACGAGAACAAAGATGTCGTCGAGTAGACCGAGCGAGTCCACAAACACAGGAGGATCCTCCTCCTCCTCTTCACAATCAAGACACACTTCAAGAATTCTCACTCAAACCTCCATAGATGCAAAGCTCCACTCCCACTTCCAACACTCCACTTCTTCATTCGACTACTCTACTTCAATCCATCTCACAGCCAACCCACCATCAACCACCACCACCCCCACCACCACCGCCTACCTCCACCACATCCAACGCTCCAACCTCATCCAACCCTTCGGCTGCCTCATAGCCCTCCACCCAACCACCCACAAACTCATCGCCTTCAGCCAAAACGCCCCTGAATTCCTCACCACAGTCTCCCACACCGTCCCCACCATCTCCGACCGCCCCGTCCTCGCCTTCGGCACCACCCTCCATTCCATCTTCACCCCTCCCACCGCCACAGCCCTCCTCAAAGCTCTAGCCTTTCCCGACGTCACTCTCCTCAACCCCATTCTCGTCCACTCCAAATCCTCACAAAAACCCTTCTACGCCATTCTCCACCGTGTCACCGGTAGCCTCATCATCGACTTCGAACCCGTCAACCCCGACGAAGTCCCCGTCACCGCAGCCGGTGCTCTCCAATCATATAAACTCGCAGCCAAAGCCATCACTCGCCTCCAAGCTCTCCCTAGTGGAAGCATGGCCAGGCTTTGTGACACCATGGTTCAAGAAGTGTTTGAACTCACAGGATATGATCGAGTCATGGCATATAAATTCCATGATGATGATCATGGGGAGGTGTTCTCTGAGGTTACAAAGCCTGGACTTGACCCATATCTTGGATTGCATTATCCAGCCACTGACATCCCACAAGCTGCAAGGTTCTTATTCATGAAGAACAAGGTTAGAATGATTGTGGACTGCAAAGCCAAACATGTCAAGGTGATTCAAGACCCAAATCTTGAGTTTGATTTGACATTATGTGGGTCAACATTGAGAGCTCCTCATAGTTGCCATTTACAATACATGGAGAATATGGATTCAATTGCATCTTTAGTTATGGCAATTGTGGTGAATGAGGAAGAACATGAAGAACAATTTGATCATAAGAACAAGAGAAAAAGATTATGGGGTTTGGTGGTTTGTCATAACACAACTCCAAGATTTGTTCCATTTCCTCTTAGATATGCATGTGAGTTTCTAGCTCAAGTGTTTGCAATTCATGTCAACAAAGAATTGGAATTGGAGAATCAAATTTTGGAGAAGAACATCTTAAGAACTCAAACGCTTTTGTGTGATATGTTGATGCGTGATGCACCATTAGGGATTGTGTCAAGGAGCCCTAATATAATGGATCTTGTGAAGTCAGATGGGGCTGCATTGTTGTACAATGATAAGGTATGGAGATTAGGGATGACTCCTAATGATTTTGAGCTTCATGATATTGCTTCATGGATTTTGGAGTATCATGTGGATTCGACTGGATTGAGTACGGATAGCTTGTACGATGCGGGGTATCACGGCGCGGTTGCTCTAGGAGACGGCGTGTGTGGGATGGCGGCGGTGAGGCTAGGTTTCAACGACATGATTTTTTGGTTCCGATCGCATGCTGCATCGGAGATTAGGTGGGGCGGGGCGAAGCATGAGGCGGGTGAGAAGGATGATGGAAGGAGAATGCATCCTAGGTCATCTTTCAAGGCTTTTCTTGAAGTGGTTAAGACAAGGAGTTTGCCTTGGAAGGACTTTGAAATGGATGCTATTCATTCTTTGCAACTTATACTAAGAAACACTTATAAAGATAAAGAGATTAATAGAAGTTCAATACAATCAACACTTAGTGACCTGAAGATTGATGGGAGGCAAGAAATTGAATCAGTGACATGTGAGATGGTGAGGTTGATTGAAACGGCTAGTGTTCCAATTTTGGCTGTTGATGTGGATGGGCTTGTTAATGGGTGGAACTCAAAAATTGCTGAATTGACTGGAATTTGTGTTGATAAGGCTATTGGCAAGCATTTGTTGACATTGGTGGAAGATTCTTCATTGGAAACTATAAAAACACAAGGCTCACACATGGAATCAAGCTCAATCAGCCTAATAGTAAATGCATGTGCAAGCAAAGACTTATGTGAGAACGTAGTGGGAGTATGCTTCGTAGCACAAGACATCACACATGAAAAGAAAGTAATGGACAAGTTCACAAAATTACAAGGCGATTACAAAGCCATAGTACAAAACCCCAACCCACTAATCCCTCCAATATTTGGGGTAGACGAATTTGGTTGGTGCACAGAGTGGAACTTAGCAATGGAAAATCTAAGTGGATGGTCAAGAGAAGAAGTGGTCAACAAGATGCTTTTGGGGGAAGTTTTTGGGTCATGCTGCCATCTAAAGAACCAAGAAGCCTTTGTGAATCTTGGGATTGTTTTGAACAATGCCATGAGTGGCCAAGATTCTGATAAGATATCATTTGGGTTCTTTGGTAGAAATGGGATGTTTGTGGAATGTCTTGTTTGTGTGAATAAGATAATGGATAGAGATGGGGAAGTGATTGGGGTTTTTTGCTTCTTGCAGCTTGCTAGCCAAGAGCTGCAACAAGCTTTGAATGTTCAAAAGTTGTGTGAGAGAACGGCTTTGAAAAGGTTGAAGGCTTTGGGATATATTAAGAGGCAGATCCAAAATCCTCTTTGTGGGATTGTTTTTACGAGTAAAATGTTGGAGAGCTCTCAGTTGGGTGATGAACAGAACCAGCTTTTGCTTAATAGTGGTGATTGTCAAAGGCAGATCTTTAAGGTTCTTCATGATTCGGATGATCTTGATAAGATTATTGAAGGCTTCATTGATTTAGAAATGGTTGAGTTCTCATTACATGAAGCATTAGTGGTATCAATTAGTCAAGTAATGATGAAGAGCAAAGGCAAAGGTATCCAAATAGTAAACGAGGTAGCAGAAGAGATCATGTCCGAGACCTTATATGGAGACAGTTTGAGACTTCAACAAGTAATGGCTGATTTCTTGTTGATATCAGTAAATTACGCACCAACAGGAAGCAGCCTTATGCTTTCAACAAAGTTGACAAAGGATCAATCAGGGAAGTCAGTGAATCTTGTGCATGTGGAGTTCAGGATAACATATGTCGGTGGTGGCATGCCAGAATCATTGTTGAATGAGATGTTTGGGAACGATGAGGAGGCGTCTGATGAAGGTTTTAGCCTTCTCGTGAGTAGAAAGTTGGTGAAGTTGATGAATGGAGAGGTGAGATATGTGAGGGAAGCAGCCAACTCAACCTTCATCATAACACTTCAGCTTGCTGCAGCTCATAAATAG

Protein sequence

MGTETRTRTRTKMSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTANPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFDHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEINRSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICVDKAIGKHLLTLVEDSSLETIKTQGSHMESSSISLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGSCCHLKNQEAFVNLGIVLNNAMSGQDSDKISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGNDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK

Homology

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BLAST of Cp4.1LG07g05650 vs. Swiss-Prot
Match: PHYA_CUCPE (Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1)

HSP 1 Score: 1684.5 bits (4361), Expect = 0.0e+00
Identity = 860/1127 (76.31%), Postives = 975/1127 (86.51%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MS+SRPS+S      SS+S +SRH++RI+ QTS+DA + + F+ S +SFDYS+S+ +T++
Sbjct: 1    MSTSRPSQS------SSNSGRSRHSTRIIAQTSVDANVQADFEESGNSFDYSSSVRVTSD 60

Query: 73   ---PPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLHHIQ+  LIQPFGCL+AL   T K+IA+S+NAPE LT VSH V
Sbjct: 61   VSGDQQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D PVL  GT + +IFT P+A+ALLKAL F +VTLLNPILVH K+S KPFYAI+HRV
Sbjct: 121  PSMGDYPVLGIGTDVRTIFTAPSASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P E PVTAAGALQSYKLAAKAITRLQ+LPSGSMARLCDTMVQEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEGPVTAAGALQSYKLAAKAITRLQSLPSGSMARLCDTMVQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFHDDDHGEV SEV KPGL PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+
Sbjct: 241  GYDRVMAYKFHDDDHGEVISEVAKPGLQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNE--EEHEEQF 372
            AKH+KV+QD  L+FDLTLCGSTLRAPHSCHLQYMENM+SIASLVMA+VVNE  EE+E   
Sbjct: 301  AKHLKVLQDEKLQFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEENEGPA 360

Query: 373  DHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRT 432
              + KRKRLWGLVVCHN++PRFVPFPLRYACEFLAQVFAIHVNKELELENQI+EKNILRT
Sbjct: 361  LQQQKRKRLWGLVVCHNSSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRT 420

Query: 433  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWIL 492
            QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLY  K+WRLG+TPNDF+L DIASW+ 
Sbjct: 421  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLS 480

Query: 493  EYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAK 552
            EYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRWGGAK
Sbjct: 481  EYHMDSTGLSTDSLYDAGYPGAIALGDEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAK 540

Query: 553  HEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKD---KEIN 612
            HE G+KDD R+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNT+KD    EIN
Sbjct: 541  HEHGQKDDARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDATEIN 600

Query: 613  RSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGIC 672
            R SIQ+TL DLKI+GRQE+ESVT EMVRLIETA+VPILAVD+DGL+NGWN+KIAELTG+ 
Sbjct: 601  RKSIQTTLGDLKIEGRQELESVTSEMVRLIETATVPILAVDLDGLINGWNTKIAELTGLP 660

Query: 673  VDKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNAC 732
            VDKAIGKHLLTLVEDSS+E                     IKT GSH+E  SISL+VNAC
Sbjct: 661  VDKAIGKHLLTLVEDSSVEVVRKMLFLALQGQEEQNVQFEIKTHGSHIEVGSISLVVNAC 720

Query: 733  ASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCT 792
            AS+DL ENVVGV FVAQDIT +K VMDKFT+L+GDYKAIVQNPNPLIPPIFG DEFGWC+
Sbjct: 721  ASRDLRENVVGVFFVAQDITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCS 780

Query: 793  EWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDK 852
            EWN AM  L+GWSREEV++KMLLGEVFG   SCC LKNQEAFVNLGIVLNNAM GQD +K
Sbjct: 781  EWNPAMAKLTGWSREEVIDKMLLGEVFGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEK 840

Query: 853  ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKR 912
             SFGF  RNGM+VECL+CVNKI+D+DG V G FCFLQL S ELQQALN+Q+LCE+TALKR
Sbjct: 841  ASFGFLARNGMYVECLLCVNKILDKDGAVTGFFCFLQLPSHELQQALNIQRLCEQTALKR 900

Query: 913  LKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDK 972
            L+ALGYIKRQIQNPL GI+F+ ++LE ++LG EQ +LL  SG CQ+QI KVL D  D+DK
Sbjct: 901  LRALGYIKRQIQNPLSGIIFSRRLLERTELGVEQKELLRTSGLCQKQISKVL-DESDIDK 960

Query: 973  IIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQV 1032
            II+GFIDLEM EF+LHE L+VSISQVM+K KGKGIQIVNE  EE MSETLYGDSLRLQQV
Sbjct: 961  IIDGFIDLEMDEFTLHEVLMVSISQVMLKIKGKGIQIVNETPEEAMSETLYGDSLRLQQV 1020

Query: 1033 MADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGN 1092
            +ADFLLISV+YAP+G  L +ST +TK+Q GKSV+LVH+EFRITY GGG+PESLLNEMFG+
Sbjct: 1021 LADFLLISVSYAPSGGQLTISTDVTKNQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGS 1080

Query: 1093 DEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            +E+AS+EGFSLL+SRKLVKLMNG+VRY+REA  S+FIIT++LAAAHK
Sbjct: 1081 EEDASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHK 1120

[Close]

BLAST of Cp4.1LG07g05650 vs. Swiss-Prot
Match: PHYA_ARATH (Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2)

HSP 1 Score: 1560.8 bits (4040), Expect = 0.0e+00
Identity = 790/1130 (69.91%), Postives = 931/1130 (82.39%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTA- 72
            MS SRP++S      S  S +SRH++RI+ QT++DAKLH+ F+ S SSFDYSTS+ +T  
Sbjct: 1    MSGSRPTQS------SEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGP 60

Query: 73   ---NPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHT 132
               N P  +   TTT YLHHIQ+  LIQPFGCL+AL   T K+IA+S+NA E LT  SH 
Sbjct: 61   VVENQPPRSDKVTTT-YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHA 120

Query: 133  VPTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHR 192
            VP++ + PVL  GT + S+FT P+A+AL KAL F DV+LLNPILVH ++S KPFYAI+HR
Sbjct: 121  VPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHR 180

Query: 193  VTGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFEL 252
            VTGS+IIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+LPSGSM RLCDTMVQEVFEL
Sbjct: 181  VTGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFEL 240

Query: 253  TGYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 312
            TGYDRVMAYKFH+DDHGEV SEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC
Sbjct: 241  TGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 300

Query: 313  KAKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHE---- 372
             AKH +V+QD  L FDLTLCGSTLRAPHSCHLQYM NMDSIASLVMA+VVNEE+ E    
Sbjct: 301  NAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAP 360

Query: 373  EQFDHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNI 432
            +      KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+NQ++EKNI
Sbjct: 361  DATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNI 420

Query: 433  LRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIAS 492
            LRTQTLLCDMLMRDAPLGIVS+SPNIMDLVK DGAALLY DK+W+LG TP++F L +IAS
Sbjct: 421  LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIAS 480

Query: 493  WILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWG 552
            W+ EYH+DSTGLSTDSL+DAG+  A++LGD VCGMAAVR+   DMIFWFRSH A E+RWG
Sbjct: 481  WLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWG 540

Query: 553  GAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKE-- 612
            GAKH+  ++DD RRMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRN +KD E  
Sbjct: 541  GAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETT 600

Query: 613  -INRSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELT 672
             +N   I S L+DLKIDG QE+E+VT EMVRLIETA+VPILAVD DGLVNGWN+KIAELT
Sbjct: 601  DVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELT 660

Query: 673  GICVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESSSISLIV 732
            G+ VD+AIGKH LTLVEDSS+E                     IKT  S  ++  ISL+V
Sbjct: 661  GLSVDEAIGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVV 720

Query: 733  NACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFG 792
            NACAS+DL ENVVGVCFVA D+T +K VMDKFT+++GDYKAI+QNPNPLIPPIFG DEFG
Sbjct: 721  NACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFG 780

Query: 793  WCTEWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQD 852
            WCTEWN AM  L+G  REEV++KMLLGEVFG   SCC LKNQEAFVNLGIVLNNA++ QD
Sbjct: 781  WCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQD 840

Query: 853  SDKISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTA 912
             +K+SF FF R G +VECL+CV+K +DR+G V GVFCFLQLAS ELQQAL+VQ+L ERTA
Sbjct: 841  PEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTA 900

Query: 913  LKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDD 972
            +KRLKAL YIKRQI+NPL GI+FT KM+E ++LG EQ ++L  S  CQ+Q+ K+L DS D
Sbjct: 901  VKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDS-D 960

Query: 973  LDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRL 1032
            L+ IIEG +DLEM EF+L+E L  S SQVMMKS GK ++I NE  EE+MS+TLYGDS+RL
Sbjct: 961  LESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRL 1020

Query: 1033 QQVMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEM 1092
            QQV+ADF+L++VN+ P+G  L +S  L KDQ G+SV+L ++E R+T+ G G+PE LLN+M
Sbjct: 1021 QQVLADFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQM 1080

Query: 1093 FGNDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            FG +E+ S+EG SL+VSRKLVKLMNG+V+Y+R+A  S+FIIT +LAAA+K
Sbjct: 1081 FGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122

[Close]

BLAST of Cp4.1LG07g05650 vs. Swiss-Prot
Match: PHYA_SOLTU (Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2)

HSP 1 Score: 1552.7 bits (4019), Expect = 0.0e+00
Identity = 784/1128 (69.50%), Postives = 926/1128 (82.09%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLT-- 72
            MSSSRPS+S+ T      SS+S+H++RI+ QTSIDAKLH+ F+ S  SFDYS+S+ +T  
Sbjct: 1    MSSSRPSQSSTT------SSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNV 60

Query: 73   -ANPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLH IQ+   IQPFGCL+AL   T K+IAFS+NAPE LT VSH V
Sbjct: 61   AEGEQRPKSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ + PVL  G  + +IFT P+  AL KAL F +V+LLNP+LVH K+S KPFYAI+HRV
Sbjct: 121  PSVGEHPVLGIGIDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+LPSGSM RLCDTMVQEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVM YKFHDDDHGEV SE+TKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMI DC+
Sbjct: 241  GYDRVMGYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVN---EEEHEEQ 372
            AKHVKV+QD  L FDLTLCGSTLRAPH CHLQYMENM+SIASLVMA+VVN   EE     
Sbjct: 301  AKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSD 360

Query: 373  FDHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILR 432
                 KRKRLWGLVV HNTTPRF PFPLRYACEFLAQVFAI VNKELELENQ LEKNILR
Sbjct: 361  SSQSQKRKRLWGLVVSHNTTPRFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILR 420

Query: 433  TQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWI 492
            TQTLLCDMLMRDAPLGIVS+SPNIMDL+K DGAALLY +K+ RLGM P+DF+LHDI SW+
Sbjct: 421  TQTLLCDMLMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWL 480

Query: 493  LEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGA 552
             EYH DSTGLSTDSLYDAG+ GA+ALGD VCGMAAVR+   D +FW+RSH A+E+RWGGA
Sbjct: 481  CEYHTDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGA 540

Query: 553  KHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEI--- 612
            KHE GEKDDGR+MHPRSSFK FLEVVKTRS+PWKD+EMD IHSLQLILRN +KD +    
Sbjct: 541  KHEPGEKDDGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNS 600

Query: 613  NRSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGI 672
            N  SI + L+DLKIDG QE+E+VT EMVRLIETASVPI AVDVDG VNGWN+K+AELTG+
Sbjct: 601  NTISIHTKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGL 660

Query: 673  CVDKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNA 732
             VD+AIGKHLLTLVEDSS++T                    IKT G   +SS ISLIVNA
Sbjct: 661  PVDEAIGKHLLTLVEDSSVDTVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNA 720

Query: 733  CASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWC 792
            CASKD+ ++VVGVCF+AQDIT +K +MDKFT+++GDY+AI+QNP+PLIPPIFG D+FGWC
Sbjct: 721  CASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWC 780

Query: 793  TEWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSD 852
            +EWN AM  L+GW R++V++KMLLGEVFG   +CC LKNQEAFVN G++LNNA++GQ+S+
Sbjct: 781  SEWNSAMTMLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESE 840

Query: 853  KISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALK 912
            KI FGFF R G +VECL+CV+K +D++G V G+FCFLQLAS ELQQAL+VQ+L E+TALK
Sbjct: 841  KIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALK 900

Query: 913  RLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLD 972
            RLK L YI+RQI+NPL GI+F+ KMLE + LG+EQ  +L  S  CQRQ+ K+L D+ DLD
Sbjct: 901  RLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDT-DLD 960

Query: 973  KIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQ 1032
             IIEG++DLEM+EF LHE LV SISQVMMKS GK I I N++ E++++ETLYGDS RLQQ
Sbjct: 961  SIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQ 1020

Query: 1033 VMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFG 1092
            V+A+FLL+SVN  P+G  L +S KLTKD+ G+SV L  +EFRI + GGG+PE LL++MFG
Sbjct: 1021 VLANFLLVSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFG 1080

Query: 1093 NDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            ++ +AS+EG SLLVSRKLVKLMNGEV+Y+REA  STFII+++LA A K
Sbjct: 1081 SEADASEEGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121

[Close]

BLAST of Cp4.1LG07g05650 vs. Swiss-Prot
Match: PHYA1_TOBAC (Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1)

HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 783/1128 (69.41%), Postives = 929/1128 (82.36%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTA- 72
            MSSSRPS+S+ T      S++S+H++RI+ QT+IDAKLH+ F+ S  SFDYS+S+ +T+ 
Sbjct: 1    MSSSRPSQSSTT------SARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSV 60

Query: 73   --NPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
              +     +   TTAYL+ IQ+   IQPFGCL+AL   T K+IAFS+NAPE LT VSH V
Sbjct: 61   AGDERKPKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ + P L  GT + +IFT P+A AL KAL F +V+LLNP+LVH K+S KP+YAI+HRV
Sbjct: 121  PSVGELPALGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVP+TAAGALQSYKLAAKAITRLQALPSGSM RLCDTMVQEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVM YKFHDDDHGEV +E+TKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMI DC+
Sbjct: 241  GYDRVMTYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVN---EEEHEEQ 372
            AKHVKV+QD  L FDLTLCGSTLRAPH CHLQYMENM SIASLVMA+VVN   EE     
Sbjct: 301  AKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSD 360

Query: 373  FDHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILR 432
                 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE+QILEKNILR
Sbjct: 361  STQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILR 420

Query: 433  TQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWI 492
            TQTLLCDMLMR APLGIVS+SPNIMDLVK DGAALLY +K+ RLGMTP+DF+LHDI SW+
Sbjct: 421  TQTLLCDMLMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWL 480

Query: 493  LEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGA 552
             EYH DSTGLSTDSLYDAG+ GA+ALGD VCGMAAVR+     +FW+RSH A+E+RWGGA
Sbjct: 481  SEYHTDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGA 540

Query: 553  KHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEI--- 612
            KHE GEKDDGR+MHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRN  KD +    
Sbjct: 541  KHEPGEKDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDS 600

Query: 613  NRSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGI 672
            N + I + L+DLKIDG QE+E+VT EMVRLIETASVPI AVDVDG +NGWN+KIAELTG+
Sbjct: 601  NTNIIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGL 660

Query: 673  CVDKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNA 732
             VD+AIG HLLTLVEDSS++T                    IKT G   +SS ISLIVNA
Sbjct: 661  PVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNA 720

Query: 733  CASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWC 792
            CAS+D+ ++VVGVCF+AQDIT +K +MDKFT+++GDY+AI+QNP+PLIPPIFG D+FGWC
Sbjct: 721  CASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWC 780

Query: 793  TEWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSD 852
            +EWN AM  L+GW R++V++KMLLGEVFG   +CC LKNQEAFVN G+VLNNAM+GQ+  
Sbjct: 781  SEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECA 840

Query: 853  KISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALK 912
            KISFGFF RNG +VECL+CV+K +DR+G V G+FCFLQLAS ELQQAL++Q+L E+TALK
Sbjct: 841  KISFGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALK 900

Query: 913  RLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLD 972
            RLK L YI+RQI+NPL GI+F+ KMLE + LG+EQ  +L  S  CQRQ+ K+L D+ DLD
Sbjct: 901  RLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDT-DLD 960

Query: 973  KIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQ 1032
             II+G++DLEM+EF LHE LV SISQ+MMKS GK I IVN++ E++++ETLYGDS RLQQ
Sbjct: 961  SIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQ 1020

Query: 1033 VMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFG 1092
            V+A+FLL+ VN  P+G  L +S  LTKD+ G+SV L  +E RI++ GGG+PE LL++MFG
Sbjct: 1021 VLANFLLVCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFG 1080

Query: 1093 NDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
             + EAS+EG SLL+SRKLVKLMNGEV+Y+REA  STFII+++LA A K
Sbjct: 1081 TEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121

[Close]

BLAST of Cp4.1LG07g05650 vs. Swiss-Prot
Match: PHYA_PEA (Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1)

HSP 1 Score: 1519.6 bits (3933), Expect = 0.0e+00
Identity = 777/1128 (68.88%), Postives = 920/1128 (81.56%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MS++RPS+S+N  G      +SR+++RI+ QT++DAKLH+ F+ S SSFDYS+S+ ++ +
Sbjct: 1    MSTTRPSQSSNNSG------RSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGS 60

Query: 73   ---PPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYL+HIQR   IQPFGCL+AL   T K++A+S+NAPE LT VSH V
Sbjct: 61   VDGDQQPRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D P L  GT + ++FT P+A+AL KAL F +V+LLNPILVH K+S KPFYAI+HRV
Sbjct: 121  PSVGDHPALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+L SGSM RLCDTMVQEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFH+DDHGEV +E+ KPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC 
Sbjct: 241  GYDRVMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCN 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNE-EEHEEQFD 372
            AKHVKV+QD  L FDLTLCGSTLRAPHSCHLQYM NMDSIASLVMA+VVN+ +E  +  D
Sbjct: 301  AKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSAD 360

Query: 373  H--KNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILR 432
                 K+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QILEKNILR
Sbjct: 361  AVLPQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILR 420

Query: 433  TQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWI 492
            TQTLLCDMLMRDAPLGIVS+SPNIMDLVK DGAAL Y +K+W LG TP + +L +IA W+
Sbjct: 421  TQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWM 480

Query: 493  LEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGA 552
             EYH DSTGLSTDSL DAG+ GA++L D VCGMAAVR+   D++FWFRSH A+EIRWGGA
Sbjct: 481  SEYHTDSTGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGA 540

Query: 553  KHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEI--- 612
            KHE G++DDGR+MHPRSSFKAFLEVVK RS+PWKDFEMDAIHSLQLILRN  KD +I   
Sbjct: 541  KHEPGDQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDL 600

Query: 613  NRSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGI 672
            N  +I + L+DLKI+G QE+E+VT EMVRLIETA+VPILAVDVDG VNGWN KIAELTG+
Sbjct: 601  NTKAINTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGL 660

Query: 673  CVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESSSISLIVNA 732
             V +AIGKHLLTLVEDSS +                     IKT G  +ES  ISLIVNA
Sbjct: 661  PVGEAIGKHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNA 720

Query: 733  CASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWC 792
            CASKDL ENVVGVCFVAQDIT +K VMDKFT+++GDYKAIVQNPN LIPPIFG DEFGWC
Sbjct: 721  CASKDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWC 780

Query: 793  TEWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSD 852
             EWN AM  L+GW REEV++KMLLGEVFG   SCC LKNQEAFVN GIVLN AM+G +++
Sbjct: 781  CEWNAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETE 840

Query: 853  KISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALK 912
            K+ FGFF R G +VECL+ V+K +D +G V GVFCFLQLAS ELQQAL++Q+L E+TALK
Sbjct: 841  KVPFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALK 900

Query: 913  RLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLD 972
            RLK L Y+KRQI+NPL GIVF+SKMLE + L  EQ +++  S  CQRQ+ K+L DS DLD
Sbjct: 901  RLKVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDS-DLD 960

Query: 973  KIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQ 1032
             II+G++DLEM EF+LHE LV S+SQVM +S  KGI+I N+VAE I  ETLYGDSLRLQQ
Sbjct: 961  GIIDGYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQ 1020

Query: 1033 VMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFG 1092
            V+ADFLLIS+N  P G  ++++  LTK+Q GKSV+LV++E  IT+ G G+PE+ LN+MFG
Sbjct: 1021 VLADFLLISINSTPNGGQVVIAASLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFG 1080

Query: 1093 NDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            N+   S+EG SL +SRKL+KLMNG+VRY++EA  S+FI++++LAAAHK
Sbjct: 1081 NNVLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHK 1121

[Close]

BLAST of Cp4.1LG07g05650 vs. TrEMBL
Match: A0A0A0KHC2_CUCSA (Phytochrome OS=Cucumis sativus GN=Csa_6G403050 PE=3 SV=1)

HSP 1 Score: 1765.0 bits (4570), Expect = 0.0e+00
Identity = 926/1146 (80.80%), Postives = 997/1146 (87.00%), Query Frame = 1


Query: 14   SSSRPSE-STNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 73
            S+SRPS+ S NT G SSSSSQSRH+SRILTQTSIDAKL SHF+ S SSFDYSTSIHLT N
Sbjct: 3    STSRPSQASRNTAGGSSSSSQSRHSSRILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNN 62

Query: 74   PPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTI 133
            P +     TTTAYL  IQ SNLIQPFGCL+ALHPTT KLIAFSQNAPE LTTV+HTVP  
Sbjct: 63   PTAAPPATTTTAYLQQIQISNLIQPFGCLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDG 122

Query: 134  SDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGS 193
             + P+LA GT L  IFT PTATALLKALAFPDVTLLNPILVHSKSS KPFYAILHRVTGS
Sbjct: 123  DNHPLLAIGTDLRGIFTAPTATALLKALAFPDVTLLNPILVHSKSSGKPFYAILHRVTGS 182

Query: 194  LIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYD 253
            LIIDFEP+ PD+VPVTAAGALQSYKLAAKAITRLQALPSGS+ RLCDTMVQEVFELTGYD
Sbjct: 183  LIIDFEPLKPDQVPVTAAGALQSYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELTGYD 242

Query: 254  RVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKH 313
            RVMAYKFHDDDHGEVFSEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+AKH
Sbjct: 243  RVMAYKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKH 302

Query: 314  VKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFD---- 373
            VKVIQD NL+FDLTLCGSTLRAPH CHLQYMENMDSIASLVMAIVVNEEE EE FD    
Sbjct: 303  VKVIQDQNLDFDLTLCGSTLRAPHCCHLQYMENMDSIASLVMAIVVNEEEEEENFDQSNN 362

Query: 374  -----HKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 433
                  K+KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN
Sbjct: 363  NDASLQKHKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 422

Query: 434  ILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIA 493
            ILRTQTLLCDMLMRDAPLGIVSR+PNIMDLVKSDGAALLYN+KVWRLG+TP DF L DIA
Sbjct: 423  ILRTQTLLCDMLMRDAPLGIVSRTPNIMDLVKSDGAALLYNNKVWRLGITPTDFHLQDIA 482

Query: 494  SWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRW 553
            SWILEYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRW
Sbjct: 483  SWILEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRISSNDMIFWFRSHTASEIRW 542

Query: 554  GGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDK-- 613
            GGAKHE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNT+KD+  
Sbjct: 543  GGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDD 602

Query: 614  ---EINRSSIQSTLSDLKI-DGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKI 673
               EI+R SIQ+TLSDLKI DGRQE+ESV         T +VPILAVDVDGLVNGWNSKI
Sbjct: 603  HMSEIHRKSIQTTLSDLKILDGRQELESV---------TTTVPILAVDVDGLVNGWNSKI 662

Query: 674  AELTGICVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESSSI 733
            AELTG+ VDKAIGK+LLTLV+DSS+E                     IKT    + S SI
Sbjct: 663  AELTGLSVDKAIGKNLLTLVKDSSVEIVKKMLVLALQGQEEKNVQFEIKTHNVDINSGSI 722

Query: 734  SLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGV 793
            SLIVNACASKDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIFG+
Sbjct: 723  SLIVNACASKDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGL 782

Query: 794  DEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGS--------CCHLKNQEAFVNLGIV 853
            DEFGWCTEWNLAM  LSGWSRE VVNKMLLGEVFG+        CC LKNQEAFVNLGIV
Sbjct: 783  DEFGWCTEWNLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIV 842

Query: 854  LNNAMSGQDSDK-ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQAL 913
            LNNAMSGQD +K ISFGF+GRNGMFVECL+CVNKI+DRDG VIGVFCFLQLASQELQQAL
Sbjct: 843  LNNAMSGQDPEKNISFGFYGRNGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQQAL 902

Query: 914  NVQKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQ 973
            ++QKLCERTA  RLKALGY+KRQIQNPLCGI+F+ KML+ +QLG EQ QLL+NS +CQRQ
Sbjct: 903  SIQKLCERTASNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQ 962

Query: 974  IFKVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMS 1033
            I KVL +S DLD II+G I+LEMVEFSL+E LVV+ISQVMMKSKGKGIQI NEV EEIM 
Sbjct: 963  ISKVLDESHDLDHIIQGVIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMC 1022

Query: 1034 ETLYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLT-KDQSGKSVNLVHVEFRITYVG 1093
            ETLYGD+LR+QQ+MADFLLISV+YAPTG  LMLST  T KD    S++L+H+EFRITYVG
Sbjct: 1023 ETLYGDNLRVQQIMADFLLISVHYAPTGGQLMLSTTFTNKDHFRNSLHLLHLEFRITYVG 1082

Query: 1094 GGMPESLLNEMFGND----EEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQL 1109
            GG+PESLLNEMFGND    E++S+EG+SL +SRKLVK+MNG+VRYVREAA STFIITLQL
Sbjct: 1083 GGIPESLLNEMFGNDNMDHEDSSEEGYSLFISRKLVKMMNGDVRYVREAAKSTFIITLQL 1139

[Close]

BLAST of Cp4.1LG07g05650 vs. TrEMBL
Match: A0A0A0KJ32_CUCSA (Phytochrome OS=Cucumis sativus GN=Csa_6G403570 PE=3 SV=1)

HSP 1 Score: 1708.3 bits (4423), Expect = 0.0e+00
Identity = 869/1127 (77.11%), Postives = 982/1127 (87.13%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MSSSRPS+S      SS+S +SRH++RI+ QTS+DAKLH+ F+ S +SFDYS+S+ ++++
Sbjct: 1    MSSSRPSQS------SSNSGRSRHSTRIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSD 60

Query: 73   PPST---TTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLHHIQ+  LIQPFGCL+AL   T K+IA+S+NAPE LT VSH V
Sbjct: 61   VSGDHQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D PVL  GT + +IFT P+A+ALLKAL F +VTLLNPILVH K+S KPFYAI+HRV
Sbjct: 121  PSMGDYPVLGIGTDVRTIFTAPSASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVPVTAAGALQSYKLAAKAITRLQ+LPSG MARLCDTMVQEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPVTAAGALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFHDDDHGEV SEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+
Sbjct: 241  GYDRVMAYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNE--EEHEEQF 372
            AKH+KV+QD  L+FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMA+VVNE  E+ E   
Sbjct: 301  AKHLKVLQDEKLQFDLTLCGSTLRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPA 360

Query: 373  DHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRT 432
              + KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELENQI+EKNILRT
Sbjct: 361  LQQQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRT 420

Query: 433  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWIL 492
            QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLY +K+WRLGMTP+DF L DIASW+ 
Sbjct: 421  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLA 480

Query: 493  EYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAK 552
            EYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRWGGAK
Sbjct: 481  EYHMDSTGLSTDSLYDAGYPGALALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAK 540

Query: 553  HEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKD---KEIN 612
            HE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNT+KD    EIN
Sbjct: 541  HEHGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEIN 600

Query: 613  RSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGIC 672
            R SIQ TL DLKI+GRQE+ESVT EMVRLIETA+VPILAVDVDGL+NGWN+KIAELTG+ 
Sbjct: 601  RKSIQMTLGDLKIEGRQELESVTSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLP 660

Query: 673  VDKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNAC 732
            VDKAIGKHLLTLVED+S+E                     IKT GSH+E  SI L+VNAC
Sbjct: 661  VDKAIGKHLLTLVEDTSVEVVKKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNAC 720

Query: 733  ASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCT 792
            AS+DL ENVVGVCFVAQDIT +K VMDKFT+L+GDYKAIVQNPNPLIPPIFG D+FGWC+
Sbjct: 721  ASRDLRENVVGVCFVAQDITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCS 780

Query: 793  EWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDK 852
            EWN AM  L+GWSREEV++KMLLGEVFG   SCC LKNQEAFVNLG+VLNNAMSGQD +K
Sbjct: 781  EWNAAMTKLTGWSREEVIDKMLLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEK 840

Query: 853  ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKR 912
            +SFGFFGRNGM+VECL+CVNKI+D+DG V GVFCFLQLAS ELQQALN+Q+LCE+TALKR
Sbjct: 841  VSFGFFGRNGMYVECLLCVNKILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKR 900

Query: 913  LKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDK 972
            L+ALGYIKR IQNPL GI+F+ ++LE ++LG EQ ++LL S  CQ+QI KVL +S DLD+
Sbjct: 901  LRALGYIKRHIQNPLSGIIFSRRLLERTELGTEQREILLTSLHCQKQISKVLEES-DLDQ 960

Query: 973  IIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQV 1032
            II+GFIDLEMVEF+LHE L VSISQVM+KSKGK IQIVNE  EE MSETLYGDSLRLQQV
Sbjct: 961  IIDGFIDLEMVEFTLHEVLKVSISQVMIKSKGKAIQIVNETVEEAMSETLYGDSLRLQQV 1020

Query: 1033 MADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGN 1092
            +ADFLL+SV+YAP G  L +ST LTKDQ GKSV+LVH+EFRITY GGG+PESLLNEMFG+
Sbjct: 1021 LADFLLLSVSYAPAGGQLKISTNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGS 1080

Query: 1093 DEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            +EEAS+EGFSLL+SRKLVKLMNG+VRY+REA  S+FIIT++LAAAHK
Sbjct: 1081 EEEASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHK 1120

[Close]

BLAST of Cp4.1LG07g05650 vs. TrEMBL
Match: A0A061F4H6_THECC (Phytochrome OS=Theobroma cacao GN=TCM_047056 PE=3 SV=1)

HSP 1 Score: 1610.9 bits (4170), Expect = 0.0e+00
Identity = 805/1126 (71.49%), Postives = 960/1126 (85.26%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MSSSRPS S      SS+S +SRH++RI+ QT++DAKLH++F+ S SSFDYS+S+ ++ +
Sbjct: 1    MSSSRPSHS------SSNSGRSRHSARIIAQTTVDAKLHANFEESGSSFDYSSSVRVSGD 60

Query: 73   PPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTI 132
                +    TTAYLH IQ+   IQPFGCL+AL   T+K+IA+S+NAPE LT VSH VP++
Sbjct: 61   QQPRSDR-VTTAYLHQIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSV 120

Query: 133  SDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGS 192
             D PVL  GT + +IFT P+++ALLKAL   +V+LLNPILVH K+S KPFYAI+HRVTGS
Sbjct: 121  GDHPVLGIGTDIKTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGS 180

Query: 193  LIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYD 252
            LIIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+LPSGSM RLCDTMVQEVFELTGYD
Sbjct: 181  LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYD 240

Query: 253  RVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKH 312
            RVMAYKFHDDDHGEV SE+TKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC AKH
Sbjct: 241  RVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKH 300

Query: 313  VKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHE----EQFD 372
            VKV QD  L FDLTLCGSTLRAPHSCHLQYMENM+SIASLVMA++VN+ + E    +   
Sbjct: 301  VKVFQDDKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQ 360

Query: 373  HKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQ 432
             + KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELENQI+EKNILRTQ
Sbjct: 361  PQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELENQIIEKNILRTQ 420

Query: 433  TLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILE 492
            TLLCDML+RDAP+GI+S+SPNIMDLVK DGAALLY +K+W+LG+TP+DF+LH+IASW+ E
Sbjct: 421  TLLCDMLLRDAPMGIISQSPNIMDLVKCDGAALLYKNKIWKLGVTPSDFQLHEIASWLSE 480

Query: 493  YHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAKH 552
            YH+DSTGLSTDSLYDAG+ GA+ALGD VCGMAAVR+   DM+FWFRSH A+EIRWGGAKH
Sbjct: 481  YHMDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITLKDMLFWFRSHTAAEIRWGGAKH 540

Query: 553  EAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKE---INR 612
            E GEKD+GR+MHPRSSFKAFL+VVKTRS+PWKD+EMDAIHSLQLILRN +KD E    N 
Sbjct: 541  EPGEKDNGRKMHPRSSFKAFLQVVKTRSMPWKDYEMDAIHSLQLILRNAFKDVETTDTNT 600

Query: 613  SSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICV 672
            S+I S LSDLKI+G QE+E+VT EMVRLIETA+VPILAVDVDGLVNGWN KIAELTG+ V
Sbjct: 601  SAIHSKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNMKIAELTGLPV 660

Query: 673  DKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNACA 732
            DKAIGKHLLTLVEDSS+ET                    IKT GS +E+  ISL+VNACA
Sbjct: 661  DKAIGKHLLTLVEDSSVETVKQMLVLALQGKEEKNIQFEIKTHGSRIEAGPISLVVNACA 720

Query: 733  SKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTE 792
            ++DL ENVVGVCFVAQDIT +K VMDKFT+++GDYKAIVQNPNPLIPPIFG+DEFGWC+E
Sbjct: 721  NRDLHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGMDEFGWCSE 780

Query: 793  WNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDKI 852
            WN AM  L+GW R+EVV+KMLLGEVFG   +CC LK+Q++FVNLG+VLNNAM+G + +K+
Sbjct: 781  WNPAMTKLTGWKRDEVVDKMLLGEVFGTHIACCRLKSQDSFVNLGVVLNNAMTGHEPEKV 840

Query: 853  SFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRL 912
             FGFF R+G +VECL+CVNK +DR+  V GVFCFLQLAS ELQQAL+VQ+L E+TA+KRL
Sbjct: 841  PFGFFARSGKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQALHVQRLSEQTAMKRL 900

Query: 913  KALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKI 972
            KAL Y+KRQI+NPL GI+F+ KM+E ++LG EQ +LL  S  CQRQ+ K+L DS DLD I
Sbjct: 901  KALAYLKRQIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQLSKILDDS-DLDSI 960

Query: 973  IEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVM 1032
            I+G++DLEM++F+LHE LV SISQVMMKS GKGI+IVN+  EE+M+ETLYGDS+RLQQV+
Sbjct: 961  IDGYLDLEMIDFTLHEVLVASISQVMMKSNGKGIRIVNDTEEEVMTETLYGDSVRLQQVL 1020

Query: 1033 ADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGND 1092
            ADFLLISVN+ P G  L++   LTKDQ G+SV+L H+E RIT+ GGG+PE+LL++MFG+D
Sbjct: 1021 ADFLLISVNFTPNGGQLVVVASLTKDQLGQSVHLAHLELRITHAGGGVPEALLSQMFGSD 1080

Query: 1093 EEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
             +AS+EG SLL+SRKLVKLMNG+++Y+REA  STFI+T++LAAA++
Sbjct: 1081 GDASEEGISLLISRKLVKLMNGDIQYLREAGRSTFIVTVELAAANR 1118

[Close]

BLAST of Cp4.1LG07g05650 vs. TrEMBL
Match: V4SEG2_9ROSI (Phytochrome OS=Citrus clementina GN=CICLE_v10027712mg PE=3 SV=1)

HSP 1 Score: 1604.3 bits (4153), Expect = 0.0e+00
Identity = 809/1124 (71.98%), Postives = 946/1124 (84.16%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MSSSRP++S      SS++ +SRH++R++ QT+IDAKLH+ F+ S +SFDYS S+ +++ 
Sbjct: 1    MSSSRPAQS------SSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSST 60

Query: 73   P---PSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLHHIQ+  LIQPFGCL+AL   T K+IA+S+NAPE LT V+H V
Sbjct: 61   AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D PVL  G+ + +IFT P+A+AL KAL F +V+LLNPILVH K+S KPFYAI+HRV
Sbjct: 121  PSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+LPSGSM RLCDTM+QEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFH+DDHGEV SE+TK GL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+
Sbjct: 241  GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFDH 372
            A+HVKV+QD  L FDLTLCGSTLRAPHSCHLQYMENM+SIASLVMA+VVN+EE E     
Sbjct: 301  ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL 360

Query: 373  KNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQT 432
              KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQT
Sbjct: 361  PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 420

Query: 433  LLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILEY 492
            LLCDMLMRDAPLGIV++SPNIMDLVK DGAALLY +K+WRLG+TPNDF+LHDI SW+ EY
Sbjct: 421  LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 480

Query: 493  HVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAKHE 552
            H+DSTGLS DSLYDAGY GA+ALGD VCGMAAVR+   DMIFWFRS  ASE+RWGGAKHE
Sbjct: 481  HMDSTGLSADSLYDAGYPGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 540

Query: 553  AGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKD---KEINRS 612
              EKDDGR+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRN +KD    +++  
Sbjct: 541  PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 600

Query: 613  SIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICVD 672
            SI S L DLKI+G +E+E+VT EMVRLIETA+VPILAVDVDGLVNGWN+KIAELTG+ VD
Sbjct: 601  SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 660

Query: 673  KAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNACAS 732
            KAIGKH LTLVEDSS++T                    IKT GS +    I+LIVNACAS
Sbjct: 661  KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 720

Query: 733  KDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEW 792
            +DL +NVVGVCFVAQDIT +K VMDKFT+++GDYKAIVQNPNPLIPPIFG DEFGWC EW
Sbjct: 721  RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 780

Query: 793  NLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDKIS 852
            N AM  L+GW REEV++K+LL EVFG   +CC LKNQEAFVNLGIVLN AMSGQD +K+ 
Sbjct: 781  NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 840

Query: 853  FGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRLK 912
            FGFF RNG + ECL+CVNK +DR+G V GVFCFLQLAS ELQQAL+VQ+L E+TALKRLK
Sbjct: 841  FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 900

Query: 913  ALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKII 972
            AL Y KRQI+NPL GI+F+ KM+E ++LG EQ +LL  S  CQRQ+ K+L DS DLD II
Sbjct: 901  ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS-DLDSII 960

Query: 973  EGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVMA 1032
            +G++DLEMVEF+L+E LV SISQVMMKS  KGI+IVNE AE+IMSETLYGDS+RLQQV+A
Sbjct: 961  DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1020

Query: 1033 DFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGNDE 1092
            DFL IS+N+ P G  LM+S+ LTKDQ G+SV+L ++E RIT+ GGG+PE LL++MFG++ 
Sbjct: 1021 DFLSISINFVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGIPEPLLDQMFGSEG 1080

Query: 1093 EASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAH 1108
            + S+EG SLL+SRKLVKLMNG+V+Y+REA  STFI++++LAAAH
Sbjct: 1081 DTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH 1117

[Close]

BLAST of Cp4.1LG07g05650 vs. TrEMBL
Match: A0A067EYQ3_CITSI (Phytochrome OS=Citrus sinensis GN=CISIN_1g001235mg PE=3 SV=1)

HSP 1 Score: 1603.6 bits (4151), Expect = 0.0e+00
Identity = 809/1124 (71.98%), Postives = 946/1124 (84.16%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MSSSRP++S      SS++ +SRH++R++ QT+IDAKLH+ F+ S +SFDYS S+ +++ 
Sbjct: 1    MSSSRPAQS------SSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSST 60

Query: 73   P---PSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLHHIQ+  LIQPFGCL+AL   T K+IA+S+NAPE LT V+H V
Sbjct: 61   AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D PVL  G+ + +IFT P+A+AL KAL F +V+LLNPILVH K+S KPFYAI+HRV
Sbjct: 121  PSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+LPSGSM RLCDTM+QEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFH+DDHGEV SE+TK GL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+
Sbjct: 241  GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFDH 372
            A+HVKV+QD  L FDLTLCGSTLRAPHSCHLQYMENM+SIASLVMA+VVN+EE E     
Sbjct: 301  ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL 360

Query: 373  KNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQT 432
              KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQT
Sbjct: 361  PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 420

Query: 433  LLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILEY 492
            LLCDMLMRDAPLGIV++SPNIMDLVK DGAALLY +K+WRLG+TPNDF+LHDI SW+ EY
Sbjct: 421  LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 480

Query: 493  HVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAKHE 552
            H+DSTGLS DSLYDAGY GA+ALGD VCGMAAVR+   DMIFWFRS  ASE+RWGGAKHE
Sbjct: 481  HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 540

Query: 553  AGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKD---KEINRS 612
              EKDDGR+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRN +KD    +++  
Sbjct: 541  PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 600

Query: 613  SIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICVD 672
            SI S L DLKI+G +E+E+VT EMVRLIETA+VPILAVDVDGLVNGWN+KIAELTG+ VD
Sbjct: 601  SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 660

Query: 673  KAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNACAS 732
            KAIGKH LTLVEDSS++T                    IKT GS +    I+LIVNACAS
Sbjct: 661  KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 720

Query: 733  KDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEW 792
            +DL +NVVGVCFVAQDIT +K VMDKFT+++GDYKAIVQNPNPLIPPIFG DEFGWC EW
Sbjct: 721  RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 780

Query: 793  NLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDKIS 852
            N AM  L+GW REEV++K+LL EVFG   +CC LKNQEAFVNLGIVLN AMSGQD +K+ 
Sbjct: 781  NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 840

Query: 853  FGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRLK 912
            FGFF RNG + ECL+CVNK +DR+G V GVFCFLQLAS ELQQAL+VQ+L E+TALKRLK
Sbjct: 841  FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 900

Query: 913  ALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKII 972
            AL Y KRQI+NPL GI+F+ KM+E ++LG EQ +LL  S  CQRQ+ K+L DS DLD II
Sbjct: 901  ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS-DLDSII 960

Query: 973  EGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVMA 1032
            +G++DLEMVEF+L+E LV SISQVMMKS  KGI+IVNE AE+IMSETLYGDS+RLQQV+A
Sbjct: 961  DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1020

Query: 1033 DFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGNDE 1092
            DFL IS+N+ P G  LM+S+ LTKDQ G+SV+L ++E RIT+ GGG+PE LL++MFG++ 
Sbjct: 1021 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEG 1080

Query: 1093 EASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAH 1108
            + S+EG SLL+SRKLVKLMNG+V+Y+REA  STFI++++LAAAH
Sbjct: 1081 DTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH 1117

[Close]

BLAST of Cp4.1LG07g05650 vs. TAIR10
Match: AT1G09570.1 (AT1G09570.1 phytochrome A)

HSP 1 Score: 1560.8 bits (4040), Expect = 0.0e+00
Identity = 790/1130 (69.91%), Postives = 931/1130 (82.39%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTA- 72
            MS SRP++S      S  S +SRH++RI+ QT++DAKLH+ F+ S SSFDYSTS+ +T  
Sbjct: 1    MSGSRPTQS------SEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGP 60

Query: 73   ---NPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHT 132
               N P  +   TTT YLHHIQ+  LIQPFGCL+AL   T K+IA+S+NA E LT  SH 
Sbjct: 61   VVENQPPRSDKVTTT-YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHA 120

Query: 133  VPTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHR 192
            VP++ + PVL  GT + S+FT P+A+AL KAL F DV+LLNPILVH ++S KPFYAI+HR
Sbjct: 121  VPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHR 180

Query: 193  VTGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFEL 252
            VTGS+IIDFEPV P EVP+TAAGALQSYKLAAKAITRLQ+LPSGSM RLCDTMVQEVFEL
Sbjct: 181  VTGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFEL 240

Query: 253  TGYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 312
            TGYDRVMAYKFH+DDHGEV SEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC
Sbjct: 241  TGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 300

Query: 313  KAKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHE---- 372
             AKH +V+QD  L FDLTLCGSTLRAPHSCHLQYM NMDSIASLVMA+VVNEE+ E    
Sbjct: 301  NAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAP 360

Query: 373  EQFDHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNI 432
            +      KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+NQ++EKNI
Sbjct: 361  DATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNI 420

Query: 433  LRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIAS 492
            LRTQTLLCDMLMRDAPLGIVS+SPNIMDLVK DGAALLY DK+W+LG TP++F L +IAS
Sbjct: 421  LRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIAS 480

Query: 493  WILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWG 552
            W+ EYH+DSTGLSTDSL+DAG+  A++LGD VCGMAAVR+   DMIFWFRSH A E+RWG
Sbjct: 481  WLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWG 540

Query: 553  GAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKE-- 612
            GAKH+  ++DD RRMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRN +KD E  
Sbjct: 541  GAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETT 600

Query: 613  -INRSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELT 672
             +N   I S L+DLKIDG QE+E+VT EMVRLIETA+VPILAVD DGLVNGWN+KIAELT
Sbjct: 601  DVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELT 660

Query: 673  GICVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESSSISLIV 732
            G+ VD+AIGKH LTLVEDSS+E                     IKT  S  ++  ISL+V
Sbjct: 661  GLSVDEAIGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVV 720

Query: 733  NACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFG 792
            NACAS+DL ENVVGVCFVA D+T +K VMDKFT+++GDYKAI+QNPNPLIPPIFG DEFG
Sbjct: 721  NACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFG 780

Query: 793  WCTEWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQD 852
            WCTEWN AM  L+G  REEV++KMLLGEVFG   SCC LKNQEAFVNLGIVLNNA++ QD
Sbjct: 781  WCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQD 840

Query: 853  SDKISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTA 912
             +K+SF FF R G +VECL+CV+K +DR+G V GVFCFLQLAS ELQQAL+VQ+L ERTA
Sbjct: 841  PEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTA 900

Query: 913  LKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDD 972
            +KRLKAL YIKRQI+NPL GI+FT KM+E ++LG EQ ++L  S  CQ+Q+ K+L DS D
Sbjct: 901  VKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDS-D 960

Query: 973  LDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRL 1032
            L+ IIEG +DLEM EF+L+E L  S SQVMMKS GK ++I NE  EE+MS+TLYGDS+RL
Sbjct: 961  LESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRL 1020

Query: 1033 QQVMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEM 1092
            QQV+ADF+L++VN+ P+G  L +S  L KDQ G+SV+L ++E R+T+ G G+PE LLN+M
Sbjct: 1021 QQVLADFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQM 1080

Query: 1093 FGNDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            FG +E+ S+EG SL+VSRKLVKLMNG+V+Y+R+A  S+FIIT +LAAA+K
Sbjct: 1081 FGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1122

[Close]

BLAST of Cp4.1LG07g05650 vs. TAIR10
Match: AT2G18790.1 (AT2G18790.1 phytochrome B)

HSP 1 Score: 1062.4 bits (2746), Expect = 1.9e-310
Identity = 557/1140 (48.86%), Postives = 757/1140 (66.40%), Query Frame = 1


Query: 2    GTETRTRTRTKMSSSRPSESTNTGGSSS--SSSQSRHTSRILTQTSIDAKLHSHFQHSTS 61
            G E    +    ++ R  E   + G+ S    S +   S+ + Q ++DA+LH+ F+ S  
Sbjct: 17   GGEEEPSSSHTPNNRRGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGE 76

Query: 62   S---FDYSTSIHLTANPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQ 121
            S   FDYS S+  T    S+      TAYL  IQR   IQPFGC+IA+  ++ ++I +S+
Sbjct: 77   SGKSFDYSQSLKTTTYG-SSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSE 136

Query: 122  NAPEFLTTVSHTVPTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSK 181
            NA E L  +  +VPT+    +LA GT + S+FT  ++  L +A    ++TLLNP+ +HSK
Sbjct: 137  NAREMLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSK 196

Query: 182  SSQKPFYAILHRVTGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMAR 241
            ++ KPFYAILHR+   ++ID EP   ++  ++ AGA+QS KLA +AI++LQALP G +  
Sbjct: 197  NTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKL 256

Query: 242  LCDTMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFL 301
            LCDT+V+ V +LTGYDRVM YKFH+D+HGEV +E  +  L+PY+GLHYPATDIPQA+RFL
Sbjct: 257  LCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFL 316

Query: 302  FMKNKVRMIVDCKAKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAI 361
            F +N+VRMIVDC A  V V+QD  L   + L GSTLRAPH CH QYM NM SIASL MA+
Sbjct: 317  FKQNRVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAV 376

Query: 362  VVNEEEHE-EQFDHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 421
            ++N  E +           RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L
Sbjct: 377  IINGNEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQL 436

Query: 422  ENQILEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPN 481
              Q+ EK +LRTQTLLCDML+RD+P GIV++SP+IMDLVK DGAA LY+ K + LG+ P+
Sbjct: 437  ALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPS 496

Query: 482  DFELHDIASWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRS 541
            + ++ D+  W+L  H DSTGLSTDSL DAGY GA ALGD VCGMA   +   D +FWFRS
Sbjct: 497  EVQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRS 556

Query: 542  HAASEIRWGGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 601
            H A EI+WGGAKH   +KDDG+RMHPRSSF+AFLEVVK+RS PW+  EMDAIHSLQLILR
Sbjct: 557  HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILR 616

Query: 602  NTYKDKEINRSS------IQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGL 661
            +++K+ E   +S      +Q         G  E+ +V  EMVRLIETA+VPI AVD  G 
Sbjct: 617  DSFKESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGC 676

Query: 662  VNGWNSKIAELTGICVDKAIGKHLLTLV--------------------EDSSLET-IKTQ 721
            +NGWN+KIAELTG+ V++A+GK L++ +                    E+ ++E  +KT 
Sbjct: 677  INGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTF 736

Query: 722  GSHMESSSISLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPN 781
               ++  ++ ++VNAC+SKD   N+VGVCFV QD+T +K VMDKF  +QGDYKAIV +PN
Sbjct: 737  SPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPN 796

Query: 782  PLIPPIFGVDEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGSCCHLKNQEAFVNLGI 841
            PLIPPIF  DE   C EWN+AME L+GWSR EV+ KM++GEVFGSCC LK  +A     I
Sbjct: 797  PLIPPIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMI 856

Query: 842  VLNNAMSGQDSDKISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQAL 901
            VL+NA+ GQD+DK  F FF RNG FV+ L+  NK +  +G+VIG FCFLQ+ S ELQQAL
Sbjct: 857  VLHNAIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQAL 916

Query: 902  NVQKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQ 961
             VQ+  +     + K L YI + I+NPL G+ F + +LE++ L ++Q QLL  S  C++Q
Sbjct: 917  AVQRRQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQ 976

Query: 962  IFKVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMS 1021
            I +++ D  DL+ I +G   L+  EF L   +   +SQ M   + +G+Q++ ++ EEI S
Sbjct: 977  ISRIVGDM-DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKS 1036

Query: 1022 ETLYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGG 1081
              ++GD +R+QQ++A+FLL  + YAP+   + +       Q       +  EFR+   G 
Sbjct: 1037 IEVFGDQIRIQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFRMACPGE 1096

Query: 1082 GMPESLLNEMFGNDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            G+P  L+ +MF +    S EG  L V RK++KLMNGEV+Y+RE+  S F+I L+L    K
Sbjct: 1097 GLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1154

[Close]

BLAST of Cp4.1LG07g05650 vs. TAIR10
Match: AT4G16250.1 (AT4G16250.1 phytochrome D)

HSP 1 Score: 1048.1 bits (2709), Expect = 3.8e-306
Identity = 563/1133 (49.69%), Postives = 745/1133 (65.75%), Query Frame = 1


Query: 4    ETRTRTRTKMSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSS--- 63
            E    +  K   S+  +  N GG + S      T++ + Q ++DA+LH+ F+ S  S   
Sbjct: 29   EQAQSSANKALRSQNQQPQNHGGGTES------TNKAIQQYTVDARLHAVFEQSGESGKS 88

Query: 64   FDYSTSIHLTANPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPE 123
            FDYS S+  TA   S+      TAYL  IQR    QPFGCLIA+  +T  +I +S+NA E
Sbjct: 89   FDYSQSLK-TAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENARE 148

Query: 124  FLTTVSHTVPTISDRP-VLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQ 183
             L  +S +VP+I D+  VL  GT L S+F   +   L +A    ++TLLNPI +HS ++ 
Sbjct: 149  MLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTG 208

Query: 184  KPFYAILHRVTGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCD 243
            KPFYAILHRV   ++ID EP   ++  ++ AGA+QS KLA +AI+ LQ+LPSG +  LCD
Sbjct: 209  KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCD 268

Query: 244  TMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMK 303
            T+V+ V +LTGYDRVM YKFH+D+HGEV +E  +  L+PY+GLHYPATDIPQA+RFLF +
Sbjct: 269  TVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQ 328

Query: 304  NKVRMIVDCKAKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVN 363
            N+VRMIVDC A  V+V+QD  L   + L GSTLRAPH CH QYM NM SIASL MA+++N
Sbjct: 329  NRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIIN 388

Query: 364  EEEHEEQFDHKNKRK--RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEN 423
              E +    +   R   RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L  
Sbjct: 389  GNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAL 448

Query: 424  QILEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDF 483
            Q+ EK +LR QTLLCDML+RD+P GIV++ P+IMDLVK +GAA LY  K + LG+TP D 
Sbjct: 449  QVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDS 508

Query: 484  ELHDIASWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHA 543
            +++DI  W++  H DSTGLSTDSL DAGY  A ALGD VCGMA   +   D +FWFRSH 
Sbjct: 509  QINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHT 568

Query: 544  ASEIRWGGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNT 603
              EI+WGGAKH   +KDDG+RM+PRSSF+ FLEVVK+R  PW+  EMDAIHSLQLILR++
Sbjct: 569  EKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDS 628

Query: 604  YKDKEINRS------SIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVN 663
            +K+ E   S      ++Q    D+   G QEI +V  EMVRLIETA+VPI AVD+DG +N
Sbjct: 629  FKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCIN 688

Query: 664  GWNSKIAELTGICVDKAIGKHLL-TLVEDSSLETI--------------------KTQGS 723
            GWN+KIAELTG+ V+ A+GK L+  L+     ET+                    KT GS
Sbjct: 689  GWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGS 748

Query: 724  HMESSSISLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPL 783
             ++  ++ ++VNAC+SKD   N+VGVCFV QD+T  K VMDKF  +QGDYKAI+ +PNPL
Sbjct: 749  ELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPL 808

Query: 784  IPPIFGVDEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGSCCHLKNQEAFVNLGIVL 843
            IPPIF  DE   C EWN AME L+GW R EV+ K+L+ EVFGS C LK  +A     IVL
Sbjct: 809  IPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPDALTKFMIVL 868

Query: 844  NNAMSGQDSDKISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNV 903
            +NA+ GQD+DK  F FF R G F++ L+ +NK +  DG++IG FCFLQ+ S ELQQAL V
Sbjct: 869  HNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEV 928

Query: 904  QKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIF 963
            Q+  E     R K L YI + I+NPL G+ FT+ +LE   L ++Q QLL  S  C++QI 
Sbjct: 929  QRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQIS 988

Query: 964  KVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSET 1023
            K++ D  D+  I +G   LE  EF +       +SQVM+  + + +Q++  +  E+ S  
Sbjct: 989  KIVGDM-DVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMA 1048

Query: 1024 LYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGM 1083
            +YGD +RLQQV+A+FLL  V YAP   S+ L    T +Q     + V +EFR+   G G+
Sbjct: 1049 VYGDQIRLQQVLAEFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFRMACAGEGV 1108

Query: 1084 PESLLNEMFGNDEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQL 1104
            P   + +MF +    S EG  L V RK++KLMNG V+Y+RE   S F+I ++L
Sbjct: 1109 PPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIEL 1153

[Close]

BLAST of Cp4.1LG07g05650 vs. TAIR10
Match: AT5G35840.1 (AT5G35840.1 phytochrome C)

HSP 1 Score: 1045.4 bits (2702), Expect = 2.4e-305
Identity = 551/1110 (49.64%), Postives = 761/1110 (68.56%), Query Frame = 1


Query: 21   STNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTANPPSTTTTP 80
            S+NT  S S S++SR  SR+ +Q  +DAKLH +F+ S   FDYS SI+L   P S+   P
Sbjct: 2    SSNT--SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNM-PSSSCEIP 61

Query: 81   TT--TAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTISDRPVL 140
            ++  + YL  IQR  LIQPFGCLI +     K+IAFS+N  E L  + HTVP++  R  L
Sbjct: 62   SSAVSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREAL 121

Query: 141  AFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGSLIIDFE 200
              GT + S+F  P  +AL KA+ F ++++LNPI +H +SS KPFYAILHR+   L+ID E
Sbjct: 122  TIGTDVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLE 181

Query: 201  PVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYDRVMAYK 260
            PV+PDEVPVTAAGAL+SYKLAAK+I+RLQALPSG+M  LCD +V+EV ELTGYDRVM YK
Sbjct: 182  PVSPDEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYK 241

Query: 261  FHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKHVKVIQD 320
            FH+D HGEV +E  +  ++PYLGLHY ATDIPQA+RFLFM+NKVRMI DC A  VKV+QD
Sbjct: 242  FHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQD 301

Query: 321  PNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFDHKNKRKRLWG 380
             +L   ++L GSTLRAPH CH QYM NM S+ASLVM++ +N  + +E        + LWG
Sbjct: 302  KSLSQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWG 361

Query: 381  LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDMLMRD 440
            LVVCH+ +PRFVPFPLRYACEFL QVF + +NKE E    + EK IL+TQ++LCDML R+
Sbjct: 362  LVVCHHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRN 421

Query: 441  APLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILEYHVDSTGLST 500
            AP+GIV++SPNIMDLVK DGAAL Y D +W LG+TP + ++ D+  W+L+ H  +TG +T
Sbjct: 422  APIGIVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTT 481

Query: 501  DSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAKHEAGEKDDGRR 560
            +SL ++GY  A  LG+ +CGMAAV +   D +FWFRS  A +I+WGGA+H+  ++ DG+R
Sbjct: 482  ESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKR 541

Query: 561  MHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEINRSSIQSTLSDLKID 620
            MHPRSSFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ E +++ +   L D ++ 
Sbjct: 542  MHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE-EHSKTVVDVPLVDNRVQ 601

Query: 621  GRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICVDKAIGKHLLTLVE 680
               E+  +  EMVRLI+TA+VPI AVD  G++NGWNSK AE+TG+ V++AIGK +  LVE
Sbjct: 602  KVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVE 661

Query: 681  DSSLETIKTQ--------------------GSHMESSSISLIVNACASKDLCENVVGVCF 740
            D S+ET+K                      G   +SS + L+VN C S+D+  NV+GVCF
Sbjct: 662  DDSVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCF 721

Query: 741  VAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEWNLAMENLSGWSR 800
            + QD+T +K + + +++++GDY  I+ +P+ LIPPIF  +E G C+EWN AM+ LSG  R
Sbjct: 722  IGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKR 781

Query: 801  EEVVNKMLLGEVFGS----CCHLKNQEAFVNLGIVLNNAMSGQDS-DKISFGFFGRNGMF 860
            EEVVNK+LLGEVF +    CC LK+ +    L I  N  +SGQ + +K+ FGF+ R+G F
Sbjct: 782  EEVVNKILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSF 841

Query: 861  VECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRLKALGYIKRQIQ 920
            +E L+  NK  D +G+V GV CFLQ+ S ELQ AL VQ++ E      L  L Y++ +++
Sbjct: 842  IEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVK 901

Query: 921  NPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKIIEGFIDLEMVE 980
            +P   I F   +L SS L ++Q +LL  S  C+ Q+ KV+ DS D++ I EG+++L+  E
Sbjct: 902  DPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDS-DIEGIEEGYVELDCSE 961

Query: 981  FSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVMADFLLISVNYA 1040
            F L E+L   + QVM  S  + +QI  +  +E+ S  LYGD+LRLQQ++++ LL S+ + 
Sbjct: 962  FGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFT 1021

Query: 1041 PTGSSLMLSTKLTK--DQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGN-DEEASDEGF 1100
            P    L +S K+    +  GK +  V +EFRI +   G+PE L+ EMF    +  S EG 
Sbjct: 1022 PALRGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGL 1081

[Close]

BLAST of Cp4.1LG07g05650 vs. TAIR10
Match: AT4G18130.1 (AT4G18130.1 phytochrome E)

HSP 1 Score: 931.0 bits (2405), Expect = 6.7e-271
Identity = 515/1117 (46.11%), Postives = 717/1117 (64.19%), Query Frame = 1


Query: 24   TGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHST---SSFDYSTSIHLTANPPSTTTTP 83
            +  S++S+ + +       Q S+DA L + F  S     SF+YS S+    +PP+     
Sbjct: 5    SSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV---ISPPNHVPDE 64

Query: 84   TTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTIS-----DR 143
              TAYL +IQR  L+QPFGCLIA+   + +++  S N+ +FL  +S  +P+ S     D+
Sbjct: 65   HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLS--LPSTSHSGEFDK 124

Query: 144  PVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGSLII 203
                 G    ++FTP +  +L KA +F +++LLNP+LVHS+++QKPFYAILHR+   +++
Sbjct: 125  VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 184

Query: 204  DFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYDRVM 263
            D EP    +  +T AGA+QS KLA +AI+RLQ+LP G +  LCDT+V++V  LTGYDRVM
Sbjct: 185  DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 244

Query: 264  AYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKHVKV 323
             Y+FH+DDHGEV SE+ +  L+PYLGLHYPATDIPQAARFLF +N+VRMI DC A  VKV
Sbjct: 245  VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 304

Query: 324  IQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFDHKNKRKR 383
            +Q   L+  L L  STLRAPH CH QYM NM S+ASL +AIVV  ++            +
Sbjct: 305  VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKD----------SSK 364

Query: 384  LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDML 443
            LWGLVV H+ +PR+VPFPLRYACEFL Q F + +  EL+L +Q+ EK  +RTQTLLCDML
Sbjct: 365  LWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDML 424

Query: 444  MRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILEYH-VDST 503
            +RD    IV++SP IMDLVK DGAAL Y  K W +G+TPN+ ++ D+ +W++E H  DST
Sbjct: 425  LRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDST 484

Query: 504  GLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAKHEAGEKD 563
            GL+TDSL DAGY GA++LGD VCG+AA      D + WFRS+ AS I+WGGAKH   +KD
Sbjct: 485  GLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKD 544

Query: 564  DGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEINRSSIQSTLSD 623
            D  RMHPRSSF AFLEV K+RSLPW+  E+DAIHSL+LI+R ++       +S +  LS 
Sbjct: 545  DAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-------TSSRPVLSG 604

Query: 624  LKI-DGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICVDKAIGKHL 683
              +     E+ S  CEMVR+IETA+ PI  VD  G +NGWN K AE+TG+   +A+GK L
Sbjct: 605  NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 664

Query: 684  L-TLVEDSSLETIKT----------------------QGSHME-SSSISLIVNACASKDL 743
               +V++ S   +++                      Q +H + SS + ++VN+C S+D 
Sbjct: 665  ADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDY 724

Query: 744  CENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEWNLA 803
             EN++GVCFV QDIT EK + D+F +LQGDYK IVQ+ NPLIPPIF  DE   C+EWN A
Sbjct: 725  TENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAA 784

Query: 804  MENLSGWSREEVVNKMLLGEVFGSCCHLKNQEAFVNLGIVLNNAMSGQDSDKISF-GFFG 863
            ME L+GWS+ EV+ KML GEVFG  C +K Q++     I L   ++G +  + S   FF 
Sbjct: 785  MEKLTGWSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFN 844

Query: 864  RNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRLKALGYI 923
            + G ++E  +  NK  + +G+VI  F FLQ+ ++E    L+  +L E  + + L  L Y+
Sbjct: 845  KEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKE--SAQSLNELTYV 904

Query: 924  KRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKIIEGFID 983
            +++I+NPL GI F  K+LESS++   Q Q L  S  C++QI  ++ +S DL  I EG + 
Sbjct: 905  RQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTII-ESTDLKSIEEGKLQ 964

Query: 984  LEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVMADFLLI 1043
            LE  EF L   L   ISQVM+  + +  Q+  EVAEEI +  L GD ++LQ ++AD L  
Sbjct: 965  LETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRN 1024

Query: 1044 SVNYAPTGSSLM-LSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMF-GNDEEAS 1103
             VN+AP  +S + +S    ++ S  +   +H++FR+ + G G+P  +L++MF   D   +
Sbjct: 1025 IVNHAPFPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVT 1084

[Close]

BLAST of Cp4.1LG07g05650 vs. NCBI nr
Match: gi|659129680|ref|XP_008464788.1| (PREDICTED: phytochrome A-like [Cucumis melo])

HSP 1 Score: 1788.1 bits (4630), Expect = 0.0e+00
Identity = 936/1146 (81.68%), Postives = 1006/1146 (87.78%), Query Frame = 1


Query: 14   SSSRPSE-STNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 73
            S+SRPS+ S NTGG SSS SQSRH+SRILTQTSIDAKL SHF+ S SSFDYSTSIHLT N
Sbjct: 3    STSRPSQASRNTGGGSSSFSQSRHSSRILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNN 62

Query: 74   P-PSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPT 133
              P+     TTTAYLH IQ+SNLIQPFGCL+ALHPTT KLIAFSQNAPE LTTV+HTVP 
Sbjct: 63   STPAPRPAATTTAYLHQIQKSNLIQPFGCLLALHPTTLKLIAFSQNAPEMLTTVAHTVPD 122

Query: 134  ISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTG 193
              + P+LA GT L +IFT PTATALLKALAFPDVTLLNPILVHSKSS KPFYA+LHRVTG
Sbjct: 123  GDNHPLLAIGTDLRAIFTAPTATALLKALAFPDVTLLNPILVHSKSSGKPFYAVLHRVTG 182

Query: 194  SLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGY 253
            SLIIDFEP+ PD+VPVTAAGALQSYKLAAKAITRLQALPSGS+ RLCDTMVQEVFELTGY
Sbjct: 183  SLIIDFEPLKPDQVPVTAAGALQSYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELTGY 242

Query: 254  DRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAK 313
            DRVMAYKFHDDDHGEVF EVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+AK
Sbjct: 243  DRVMAYKFHDDDHGEVFCEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAK 302

Query: 314  HVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEE-QFDHK 373
            HVKVIQD NL+FDLTLCGSTLRAPH CHLQYMENMDSIASLVMAIVVNEEE EE  FDH 
Sbjct: 303  HVKVIQDHNLDFDLTLCGSTLRAPHCCHLQYMENMDSIASLVMAIVVNEEEDEEINFDHN 362

Query: 374  N---------KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILE 433
            N         KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILE
Sbjct: 363  NNNDASVQKLKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILE 422

Query: 434  KNILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHD 493
            KNILRTQTLLCDMLMRDAPLGIVSR+PNIMDLVKSDGAALLYN+KVWRLG+TP DF L D
Sbjct: 423  KNILRTQTLLCDMLMRDAPLGIVSRTPNIMDLVKSDGAALLYNNKVWRLGITPTDFHLQD 482

Query: 494  IASWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEI 553
            IASWILEYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEI
Sbjct: 483  IASWILEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRISSNDMIFWFRSHTASEI 542

Query: 554  RWGGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDK 613
            RWGGAKHE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNT+KD+
Sbjct: 543  RWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDR 602

Query: 614  -----EINRSSIQSTLSDLK-IDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNS 673
                 EI+R SIQ+TLSDLK IDGRQE+ESVT EMVRLIETA+VPILAVDVDGLVNGWNS
Sbjct: 603  DDHMSEIHRKSIQTTLSDLKIIDGRQELESVTSEMVRLIETATVPILAVDVDGLVNGWNS 662

Query: 674  KIAELTGICVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESS 733
            KIAELTG+ VDKAIGK+LLTLVEDSS+E                     IKT    + S 
Sbjct: 663  KIAELTGLSVDKAIGKNLLTLVEDSSVEIVKKMLVLALQGQEEKNVQFEIKTHNKDINSG 722

Query: 734  SISLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIF 793
            SISLIVNACASKDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIF
Sbjct: 723  SISLIVNACASKDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIF 782

Query: 794  GVDEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGS--------CCHLKNQEAFVNLG 853
            G+DEFGWCTEWNLAM  LSGWSRE VVNKMLLGEVFG+        CC LKNQEAFVNLG
Sbjct: 783  GLDEFGWCTEWNLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLG 842

Query: 854  IVLNNAMSGQDSDK-ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQ 913
            IVLNNAMSGQD +K ISFGF+GRNGMFVECL+CVNKI+DRDG VIGVFCFLQLASQELQQ
Sbjct: 843  IVLNNAMSGQDPEKNISFGFYGRNGMFVECLLCVNKILDRDGGVIGVFCFLQLASQELQQ 902

Query: 914  ALNVQKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQ 973
            ALN+QKLCERTAL RLKALGY+KRQIQNPL GI+F+ KML+ +QLG EQ QLL+NS +CQ
Sbjct: 903  ALNIQKLCERTALNRLKALGYMKRQIQNPLSGIIFSRKMLQQTQLGVEQKQLLINSVNCQ 962

Query: 974  RQIFKVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEI 1033
            RQI KVL +S DLD II+G ++LEMVEFSL+E LVV+ISQVMMKSKGKGIQI NEV EEI
Sbjct: 963  RQISKVLDESHDLDHIIQGLVELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEI 1022

Query: 1034 MSETLYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLTKDQS--GKSVNLVHVEFRIT 1093
            M ETLYGD+LRLQQ+MADFLLISV+YAPTG  LMLST  T +    G S++L+H+EFRIT
Sbjct: 1023 MCETLYGDNLRLQQIMADFLLISVHYAPTGGQLMLSTTFTNNDHHFGNSLHLLHLEFRIT 1082

Query: 1094 YVGGGMPESLLNEMFGND----EEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIIT 1107
            YVGGG+PESLLNEMFGND    E++SDEGFSL +SRKLVK+MNG+VRYVREAA STFIIT
Sbjct: 1083 YVGGGIPESLLNEMFGNDIIDHEDSSDEGFSLFISRKLVKMMNGDVRYVREAAKSTFIIT 1142

[Close]

BLAST of Cp4.1LG07g05650 vs. NCBI nr
Match: gi|778722284|ref|XP_011658452.1| (PREDICTED: phytochrome A-like [Cucumis sativus])

HSP 1 Score: 1787.7 bits (4629), Expect = 0.0e+00
Identity = 935/1146 (81.59%), Postives = 1006/1146 (87.78%), Query Frame = 1


Query: 14   SSSRPSE-STNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 73
            S+SRPS+ S NT G SSSSSQSRH+SRILTQTSIDAKL SHF+ S SSFDYSTSIHLT N
Sbjct: 3    STSRPSQASRNTAGGSSSSSQSRHSSRILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNN 62

Query: 74   PPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTI 133
            P +     TTTAYL  IQ SNLIQPFGCL+ALHPTT KLIAFSQNAPE LTTV+HTVP  
Sbjct: 63   PTAAPPATTTTAYLQQIQISNLIQPFGCLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDG 122

Query: 134  SDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGS 193
             + P+LA GT L  IFT PTATALLKALAFPDVTLLNPILVHSKSS KPFYAILHRVTGS
Sbjct: 123  DNHPLLAIGTDLRGIFTAPTATALLKALAFPDVTLLNPILVHSKSSGKPFYAILHRVTGS 182

Query: 194  LIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYD 253
            LIIDFEP+ PD+VPVTAAGALQSYKLAAKAITRLQALPSGS+ RLCDTMVQEVFELTGYD
Sbjct: 183  LIIDFEPLKPDQVPVTAAGALQSYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELTGYD 242

Query: 254  RVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKH 313
            RVMAYKFHDDDHGEVFSEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+AKH
Sbjct: 243  RVMAYKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKH 302

Query: 314  VKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFD---- 373
            VKVIQD NL+FDLTLCGSTLRAPH CHLQYMENMDSIASLVMAIVVNEEE EE FD    
Sbjct: 303  VKVIQDQNLDFDLTLCGSTLRAPHCCHLQYMENMDSIASLVMAIVVNEEEEEENFDQSNN 362

Query: 374  -----HKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 433
                  K+KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN
Sbjct: 363  NDASLQKHKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 422

Query: 434  ILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIA 493
            ILRTQTLLCDMLMRDAPLGIVSR+PNIMDLVKSDGAALLYN+KVWRLG+TP DF L DIA
Sbjct: 423  ILRTQTLLCDMLMRDAPLGIVSRTPNIMDLVKSDGAALLYNNKVWRLGITPTDFHLQDIA 482

Query: 494  SWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRW 553
            SWILEYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRW
Sbjct: 483  SWILEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRISSNDMIFWFRSHTASEIRW 542

Query: 554  GGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDK-- 613
            GGAKHE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNT+KD+  
Sbjct: 543  GGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDD 602

Query: 614  ---EINRSSIQSTLSDLKI-DGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKI 673
               EI+R SIQ+TLSDLKI DGRQE+ESVT EMVRLIETA+VPILAVDVDGLVNGWNSKI
Sbjct: 603  HMSEIHRKSIQTTLSDLKILDGRQELESVTSEMVRLIETATVPILAVDVDGLVNGWNSKI 662

Query: 674  AELTGICVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESSSI 733
            AELTG+ VDKAIGK+LLTLV+DSS+E                     IKT    + S SI
Sbjct: 663  AELTGLSVDKAIGKNLLTLVKDSSVEIVKKMLVLALQGQEEKNVQFEIKTHNVDINSGSI 722

Query: 734  SLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGV 793
            SLIVNACASKDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIFG+
Sbjct: 723  SLIVNACASKDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGL 782

Query: 794  DEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGS--------CCHLKNQEAFVNLGIV 853
            DEFGWCTEWNLAM  LSGWSRE VVNKMLLGEVFG+        CC LKNQEAFVNLGIV
Sbjct: 783  DEFGWCTEWNLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIV 842

Query: 854  LNNAMSGQDSDK-ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQAL 913
            LNNAMSGQD +K ISFGF+GRNGMFVECL+CVNKI+DRDG VIGVFCFLQLASQELQQAL
Sbjct: 843  LNNAMSGQDPEKNISFGFYGRNGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQQAL 902

Query: 914  NVQKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQ 973
            ++QKLCERTA  RLKALGY+KRQIQNPLCGI+F+ KML+ +QLG EQ QLL+NS +CQRQ
Sbjct: 903  SIQKLCERTASNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQ 962

Query: 974  IFKVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMS 1033
            I KVL +S DLD II+G I+LEMVEFSL+E LVV+ISQVMMKSKGKGIQI NEV EEIM 
Sbjct: 963  ISKVLDESHDLDHIIQGVIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMC 1022

Query: 1034 ETLYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLT-KDQSGKSVNLVHVEFRITYVG 1093
            ETLYGD+LR+QQ+MADFLLISV+YAPTG  LMLST  T KD    S++L+H+EFRITYVG
Sbjct: 1023 ETLYGDNLRVQQIMADFLLISVHYAPTGGQLMLSTTFTNKDHFRNSLHLLHLEFRITYVG 1082

Query: 1094 GGMPESLLNEMFGND----EEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQL 1109
            GG+PESLLNEMFGND    E++S+EG+SL +SRKLVK+MNG+VRYVREAA STFIITLQL
Sbjct: 1083 GGIPESLLNEMFGNDNMDHEDSSEEGYSLFISRKLVKMMNGDVRYVREAAKSTFIITLQL 1142

[Close]

BLAST of Cp4.1LG07g05650 vs. NCBI nr
Match: gi|700192583|gb|KGN47787.1| (hypothetical protein Csa_6G403050 [Cucumis sativus])

HSP 1 Score: 1765.0 bits (4570), Expect = 0.0e+00
Identity = 926/1146 (80.80%), Postives = 997/1146 (87.00%), Query Frame = 1


Query: 14   SSSRPSE-STNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 73
            S+SRPS+ S NT G SSSSSQSRH+SRILTQTSIDAKL SHF+ S SSFDYSTSIHLT N
Sbjct: 3    STSRPSQASRNTAGGSSSSSQSRHSSRILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNN 62

Query: 74   PPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPTI 133
            P +     TTTAYL  IQ SNLIQPFGCL+ALHPTT KLIAFSQNAPE LTTV+HTVP  
Sbjct: 63   PTAAPPATTTTAYLQQIQISNLIQPFGCLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDG 122

Query: 134  SDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTGS 193
             + P+LA GT L  IFT PTATALLKALAFPDVTLLNPILVHSKSS KPFYAILHRVTGS
Sbjct: 123  DNHPLLAIGTDLRGIFTAPTATALLKALAFPDVTLLNPILVHSKSSGKPFYAILHRVTGS 182

Query: 194  LIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGYD 253
            LIIDFEP+ PD+VPVTAAGALQSYKLAAKAITRLQALPSGS+ RLCDTMVQEVFELTGYD
Sbjct: 183  LIIDFEPLKPDQVPVTAAGALQSYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELTGYD 242

Query: 254  RVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAKH 313
            RVMAYKFHDDDHGEVFSEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+AKH
Sbjct: 243  RVMAYKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKH 302

Query: 314  VKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFD---- 373
            VKVIQD NL+FDLTLCGSTLRAPH CHLQYMENMDSIASLVMAIVVNEEE EE FD    
Sbjct: 303  VKVIQDQNLDFDLTLCGSTLRAPHCCHLQYMENMDSIASLVMAIVVNEEEEEENFDQSNN 362

Query: 374  -----HKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 433
                  K+KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN
Sbjct: 363  NDASLQKHKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 422

Query: 434  ILRTQTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIA 493
            ILRTQTLLCDMLMRDAPLGIVSR+PNIMDLVKSDGAALLYN+KVWRLG+TP DF L DIA
Sbjct: 423  ILRTQTLLCDMLMRDAPLGIVSRTPNIMDLVKSDGAALLYNNKVWRLGITPTDFHLQDIA 482

Query: 494  SWILEYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRW 553
            SWILEYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRW
Sbjct: 483  SWILEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRISSNDMIFWFRSHTASEIRW 542

Query: 554  GGAKHEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDK-- 613
            GGAKHE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNT+KD+  
Sbjct: 543  GGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDD 602

Query: 614  ---EINRSSIQSTLSDLKI-DGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKI 673
               EI+R SIQ+TLSDLKI DGRQE+ESV         T +VPILAVDVDGLVNGWNSKI
Sbjct: 603  HMSEIHRKSIQTTLSDLKILDGRQELESV---------TTTVPILAVDVDGLVNGWNSKI 662

Query: 674  AELTGICVDKAIGKHLLTLVEDSSLE--------------------TIKTQGSHMESSSI 733
            AELTG+ VDKAIGK+LLTLV+DSS+E                     IKT    + S SI
Sbjct: 663  AELTGLSVDKAIGKNLLTLVKDSSVEIVKKMLVLALQGQEEKNVQFEIKTHNVDINSGSI 722

Query: 734  SLIVNACASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGV 793
            SLIVNACASKDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIFG+
Sbjct: 723  SLIVNACASKDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGL 782

Query: 794  DEFGWCTEWNLAMENLSGWSREEVVNKMLLGEVFGS--------CCHLKNQEAFVNLGIV 853
            DEFGWCTEWNLAM  LSGWSRE VVNKMLLGEVFG+        CC LKNQEAFVNLGIV
Sbjct: 783  DEFGWCTEWNLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIV 842

Query: 854  LNNAMSGQDSDK-ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQAL 913
            LNNAMSGQD +K ISFGF+GRNGMFVECL+CVNKI+DRDG VIGVFCFLQLASQELQQAL
Sbjct: 843  LNNAMSGQDPEKNISFGFYGRNGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQQAL 902

Query: 914  NVQKLCERTALKRLKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQ 973
            ++QKLCERTA  RLKALGY+KRQIQNPLCGI+F+ KML+ +QLG EQ QLL+NS +CQRQ
Sbjct: 903  SIQKLCERTASNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQ 962

Query: 974  IFKVLHDSDDLDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMS 1033
            I KVL +S DLD II+G I+LEMVEFSL+E LVV+ISQVMMKSKGKGIQI NEV EEIM 
Sbjct: 963  ISKVLDESHDLDHIIQGVIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMC 1022

Query: 1034 ETLYGDSLRLQQVMADFLLISVNYAPTGSSLMLSTKLT-KDQSGKSVNLVHVEFRITYVG 1093
            ETLYGD+LR+QQ+MADFLLISV+YAPTG  LMLST  T KD    S++L+H+EFRITYVG
Sbjct: 1023 ETLYGDNLRVQQIMADFLLISVHYAPTGGQLMLSTTFTNKDHFRNSLHLLHLEFRITYVG 1082

Query: 1094 GGMPESLLNEMFGND----EEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQL 1109
            GG+PESLLNEMFGND    E++S+EG+SL +SRKLVK+MNG+VRYVREAA STFIITLQL
Sbjct: 1083 GGIPESLLNEMFGNDNMDHEDSSEEGYSLFISRKLVKMMNGDVRYVREAAKSTFIITLQL 1139

[Close]

BLAST of Cp4.1LG07g05650 vs. NCBI nr
Match: gi|449458035|ref|XP_004146753.1| (PREDICTED: phytochrome A [Cucumis sativus])

HSP 1 Score: 1708.3 bits (4423), Expect = 0.0e+00
Identity = 869/1127 (77.11%), Postives = 982/1127 (87.13%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MSSSRPS+S      SS+S +SRH++RI+ QTS+DAKLH+ F+ S +SFDYS+S+ ++++
Sbjct: 1    MSSSRPSQS------SSNSGRSRHSTRIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSD 60

Query: 73   PPST---TTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLHHIQ+  LIQPFGCL+AL   T K+IA+S+NAPE LT VSH V
Sbjct: 61   VSGDHQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAV 120

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D PVL  GT + +IFT P+A+ALLKAL F +VTLLNPILVH K+S KPFYAI+HRV
Sbjct: 121  PSMGDYPVLGIGTDVRTIFTAPSASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRV 180

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVPVTAAGALQSYKLAAKAITRLQ+LPSG MARLCDTMVQEVFELT
Sbjct: 181  TGSLIIDFEPVKPYEVPVTAAGALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELT 240

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFHDDDHGEV SEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+
Sbjct: 241  GYDRVMAYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 300

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNE--EEHEEQF 372
            AKH+KV+QD  L+FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMA+VVNE  E+ E   
Sbjct: 301  AKHLKVLQDEKLQFDLTLCGSTLRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPA 360

Query: 373  DHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRT 432
              + KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELENQI+EKNILRT
Sbjct: 361  LQQQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRT 420

Query: 433  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWIL 492
            QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLY +K+WRLGMTP+DF L DIASW+ 
Sbjct: 421  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLA 480

Query: 493  EYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAK 552
            EYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRWGGAK
Sbjct: 481  EYHMDSTGLSTDSLYDAGYPGALALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAK 540

Query: 553  HEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKD---KEIN 612
            HE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNT+KD    EIN
Sbjct: 541  HEHGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEIN 600

Query: 613  RSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGIC 672
            R SIQ TL DLKI+GRQE+ESVT EMVRLIETA+VPILAVDVDGL+NGWN+KIAELTG+ 
Sbjct: 601  RKSIQMTLGDLKIEGRQELESVTSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLP 660

Query: 673  VDKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNAC 732
            VDKAIGKHLLTLVED+S+E                     IKT GSH+E  SI L+VNAC
Sbjct: 661  VDKAIGKHLLTLVEDTSVEVVKKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNAC 720

Query: 733  ASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCT 792
            AS+DL ENVVGVCFVAQDIT +K VMDKFT+L+GDYKAIVQNPNPLIPPIFG D+FGWC+
Sbjct: 721  ASRDLRENVVGVCFVAQDITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCS 780

Query: 793  EWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDK 852
            EWN AM  L+GWSREEV++KMLLGEVFG   SCC LKNQEAFVNLG+VLNNAMSGQD +K
Sbjct: 781  EWNAAMTKLTGWSREEVIDKMLLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEK 840

Query: 853  ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKR 912
            +SFGFFGRNGM+VECL+CVNKI+D+DG V GVFCFLQLAS ELQQALN+Q+LCE+TALKR
Sbjct: 841  VSFGFFGRNGMYVECLLCVNKILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKR 900

Query: 913  LKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDK 972
            L+ALGYIKR IQNPL GI+F+ ++LE ++LG EQ ++LL S  CQ+QI KVL +S DLD+
Sbjct: 901  LRALGYIKRHIQNPLSGIIFSRRLLERTELGTEQREILLTSLHCQKQISKVLEES-DLDQ 960

Query: 973  IIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQV 1032
            II+GFIDLEMVEF+LHE L VSISQVM+KSKGK IQIVNE  EE MSETLYGDSLRLQQV
Sbjct: 961  IIDGFIDLEMVEFTLHEVLKVSISQVMIKSKGKAIQIVNETVEEAMSETLYGDSLRLQQV 1020

Query: 1033 MADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGN 1092
            +ADFLL+SV+YAP G  L +ST LTKDQ GKSV+LVH+EFRITY GGG+PESLLNEMFG+
Sbjct: 1021 LADFLLLSVSYAPAGGQLKISTNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGS 1080

Query: 1093 DEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            +EEAS+EGFSLL+SRKLVKLMNG+VRY+REA  S+FIIT++LAAAHK
Sbjct: 1081 EEEASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHK 1120

[Close]

BLAST of Cp4.1LG07g05650 vs. NCBI nr
Match: gi|659129676|ref|XP_008464786.1| (PREDICTED: phytochrome A [Cucumis melo])

HSP 1 Score: 1703.7 bits (4411), Expect = 0.0e+00
Identity = 866/1127 (76.84%), Postives = 981/1127 (87.05%), Query Frame = 1


Query: 13   MSSSRPSESTNTGGSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSTSSFDYSTSIHLTAN 72
            MSSSRPS+S      SS+S +SRH++RI+ QTS+DAKLH+ F+ S +SFDYS+S+ ++++
Sbjct: 95   MSSSRPSQS------SSNSGRSRHSTRIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSD 154

Query: 73   PPST---TTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTV 132
                    +   TTAYLHHIQ+  LIQPFGCL+AL   T K+IA+S+NAPE LT VSH V
Sbjct: 155  VSGDHQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAV 214

Query: 133  PTISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRV 192
            P++ D PVL  GT + +IFT P+A+ALLKAL F +VTLLNPILVH K+S KPFYAI+HRV
Sbjct: 215  PSMGDYPVLGIGTDVRTIFTAPSASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRV 274

Query: 193  TGSLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELT 252
            TGSLIIDFEPV P EVPVTAAGALQSYKLAAKAITRLQ+LPSG MARLCDTMVQEVFELT
Sbjct: 275  TGSLIIDFEPVKPYEVPVTAAGALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELT 334

Query: 253  GYDRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCK 312
            GYDRVMAYKFHDDDHGEV SEVTKPGL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC+
Sbjct: 335  GYDRVMAYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 394

Query: 313  AKHVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNE--EEHEEQF 372
            AKH+KV+QD  L+FDLTLCGSTLRAPHSCHLQYMENM+SIASLVMA+VVNE  E+ E   
Sbjct: 395  AKHLKVLQDEKLQFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEDAEGPA 454

Query: 373  DHKNKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRT 432
              + KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELENQI+EKNILRT
Sbjct: 455  LQQQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRT 514

Query: 433  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWIL 492
            QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLY +K+WRLGMTP+DF L DIASW+ 
Sbjct: 515  QTLLCDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLS 574

Query: 493  EYHVDSTGLSTDSLYDAGYHGAVALGDGVCGMAAVRLGFNDMIFWFRSHAASEIRWGGAK 552
            EYH+DSTGLSTDSLYDAGY GA+ALGD VCGMAAVR+  NDMIFWFRSH ASEIRWGGAK
Sbjct: 575  EYHMDSTGLSTDSLYDAGYPGALALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAK 634

Query: 553  HEAGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKD---KEIN 612
            HE GEKDDGR+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNT+KD    EIN
Sbjct: 635  HEHGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEIN 694

Query: 613  RSSIQSTLSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGIC 672
            R SIQ TL DLKI+GRQE+ESVT EMVRLIETA+VPILAVDVDG +NGWN+KIAELTG+ 
Sbjct: 695  RKSIQMTLGDLKIEGRQELESVTSEMVRLIETATVPILAVDVDGSINGWNTKIAELTGLP 754

Query: 673  VDKAIGKHLLTLVEDSSLET--------------------IKTQGSHMESSSISLIVNAC 732
            VDKAIGKHLLTLVED+S+E                     IKT GSH+E  SI L+VNAC
Sbjct: 755  VDKAIGKHLLTLVEDTSVEVVKKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNAC 814

Query: 733  ASKDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCT 792
            AS+DL ENVVGVCFVAQDIT +K VMDKFT+L+GDYKAIVQNPNPLIPPIFG D+FGWC+
Sbjct: 815  ASRDLRENVVGVCFVAQDITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCS 874

Query: 793  EWNLAMENLSGWSREEVVNKMLLGEVFG---SCCHLKNQEAFVNLGIVLNNAMSGQDSDK 852
            EWN AM  ++GWSREEV++KMLLGEVFG   SCC LKNQEAFVNLG+VLNNAMSGQD +K
Sbjct: 875  EWNPAMTKVTGWSREEVIDKMLLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEK 934

Query: 853  ISFGFFGRNGMFVECLVCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKR 912
            +SFGFF RNGM+VECL+CVNKI+D+DG + GVFCFLQLAS ELQQALN+Q+LCE+TALKR
Sbjct: 935  VSFGFFARNGMYVECLLCVNKILDKDGVITGVFCFLQLASHELQQALNIQRLCEQTALKR 994

Query: 913  LKALGYIKRQIQNPLCGIVFTSKMLESSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDK 972
            L+ALGYIKR +QNPL GI+F+ ++LE ++LG EQ ++LL S  CQ+QI KVL +S DLDK
Sbjct: 995  LRALGYIKRHVQNPLSGIIFSRRLLERTELGIEQREILLTSLHCQKQISKVLEES-DLDK 1054

Query: 973  IIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQV 1032
            II+GFIDLEMVEF+LHE L VSISQVM+KSKGK IQIVNE  EE MSETLYGDSLRLQQV
Sbjct: 1055 IIDGFIDLEMVEFTLHEVLKVSISQVMIKSKGKAIQIVNETVEEAMSETLYGDSLRLQQV 1114

Query: 1033 MADFLLISVNYAPTGSSLMLSTKLTKDQSGKSVNLVHVEFRITYVGGGMPESLLNEMFGN 1092
            +ADFLL+SV+YAP G  L +ST LTKDQ GKSV+LVH+EFRITY GGG+PESLLNEMFG+
Sbjct: 1115 LADFLLLSVSYAPAGGQLTISTNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGS 1174

Query: 1093 DEEASDEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK 1109
            +EEAS+EGFSLL+SRKLVKLMNG+VRY+REA  S+FIIT++LAAAHK
Sbjct: 1175 EEEASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHK 1214

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g05650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHYA_CUCPE	0.0e+00	76.31	Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1	[more]
PHYA_ARATH	0.0e+00	69.91	Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2	[more]
PHYA_SOLTU	0.0e+00	69.50	Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2	[more]
PHYA1_TOBAC	0.0e+00	69.41	Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1	[more]
PHYA_PEA	0.0e+00	68.88	Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1	[more]

BLAST of Cp4.1LG07g05650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHC2_CUCSA	0.0e+00	80.80	Phytochrome OS=Cucumis sativus GN=Csa_6G403050 PE=3 SV=1	[more]
A0A0A0KJ32_CUCSA	0.0e+00	77.11	Phytochrome OS=Cucumis sativus GN=Csa_6G403570 PE=3 SV=1	[more]
A0A061F4H6_THECC	0.0e+00	71.49	Phytochrome OS=Theobroma cacao GN=TCM_047056 PE=3 SV=1	[more]
V4SEG2_9ROSI	0.0e+00	71.98	Phytochrome OS=Citrus clementina GN=CICLE_v10027712mg PE=3 SV=1	[more]
A0A067EYQ3_CITSI	0.0e+00	71.98	Phytochrome OS=Citrus sinensis GN=CISIN_1g001235mg PE=3 SV=1	[more]

BLAST of Cp4.1LG07g05650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09570.1	0.0e+00	69.91	phytochrome A	[more]
AT2G18790.1	1.9e-310	48.86	phytochrome B	[more]
AT4G16250.1	3.8e-306	49.69	phytochrome D	[more]
AT5G35840.1	2.4e-305	49.64	phytochrome C	[more]
AT4G18130.1	6.7e-271	46.11	phytochrome E	[more]

BLAST of Cp4.1LG07g05650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129680\|ref\|XP_008464788.1\|	0.0e+00	81.68	PREDICTED: phytochrome A-like [Cucumis melo]	[more]
gi\|778722284\|ref\|XP_011658452.1\|	0.0e+00	81.59	PREDICTED: phytochrome A-like [Cucumis sativus]	[more]
gi\|700192583\|gb\|KGN47787.1\|	0.0e+00	80.80	hypothetical protein Csa_6G403050 [Cucumis sativus]	[more]
gi\|449458035\|ref\|XP_004146753.1\|	0.0e+00	77.11	PREDICTED: phytochrome A [Cucumis sativus]	[more]
gi\|659129676\|ref\|XP_008464786.1\|	0.0e+00	76.84	PREDICTED: phytochrome A [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0018298	protein-chromophore linkage
GO:0017006	protein-tetrapyrrole linkage
GO:0009585	red, far-red light phototransduction
GO:0009584	detection of visible light
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0042803	protein homodimerization activity
GO:0009881	photoreceptor activity
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016132	Phyto_chromo_attachment
IPR013767	PAS_fold
IPR013654	PAS_2
IPR013516	Phyto_chromo_BS
IPR013515	Phytochrome_cen-reg
IPR012129	Phytochrome_A-E
IPR005467	His_kinase_dom
IPR003594	HATPase_C
IPR003018	GAF
IPR001294	Phytochrome
IPR000014	PAS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0010203	response to very low fluence red light stimulus
biological_process	GO:0009584	detection of visible light
biological_process	GO:0046685	response to arsenic-containing substance
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010161	red light signaling pathway
biological_process	GO:0010201	response to continuous far red light stimulus by the high-irradiance response system
biological_process	GO:0017006	protein-tetrapyrrole linkage
biological_process	GO:0009630	gravitropism
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0010018	far-red light signaling pathway
biological_process	GO:0016310	phosphorylation
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0009638	phototropism
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016604	nuclear body
molecular_function	GO:0031516	far-red light photoreceptor activity
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0009881	photoreceptor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g05650.1	Cp4.1LG07g05650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	SMART	SM00091	pas_2	coord: 738..808 score: 5.2E-4coord: 628..694 score: 0.
IPR000014	PAS domain	PROFILE	PS50112	PAS	coord: 739..817 score: 13.194coord: 626..686 score: 13
IPR000014	PAS domain	unknown	SSF55785	PYP-like sensor domain (PAS domain)	coord: 753..856 score: 1.07E-9coord: 632..717 score: 2.93E-8coord: 89..203 score: 3.71
IPR001294	Phytochrome	PRINTS	PR01033	PHYTOCHROME	coord: 248..267 score: 1.4E-84coord: 443..463 score: 1.4E-84coord: 721..741 score: 1.4E-84coord: 148..170 score: 1.4E-84coord: 561..579 score: 1.4E-84coord: 701..718 score: 1.4E-84coord: 528..547 score: 1.4E-84coord: 333..354 score: 1.4
IPR003018	GAF domain	PFAM	PF01590	GAF	coord: 234..413 score: 3.5
IPR003018	GAF domain	SMART	SM00065	gaf_1	coord: 233..423 score: 1.
IPR003594	Histidine kinase-like ATPase, C-terminal domain	GENE3D	G3DSA:3.30.565.10		coord: 949..1101 score: 1.0
IPR003594	Histidine kinase-like ATPase, C-terminal domain	PFAM	PF02518	HATPase_c	coord: 993..1104 score: 3.
IPR003594	Histidine kinase-like ATPase, C-terminal domain	SMART	SM00387	HKATPase_4	coord: 993..1105 score: 5.
IPR003594	Histidine kinase-like ATPase, C-terminal domain	unknown	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 938..1101 score: 7.36
IPR005467	Histidine kinase domain	PROFILE	PS50109	HIS_KIN	coord: 887..1105 score: 31
IPR012129	Phytochrome A/B/C/D/E	PIR	PIRSF000084	Phytochrome_conventional	coord: 16..1108 score:
IPR013515	Phytochrome, central region	PFAM	PF00360	PHY	coord: 425..601 score: 4.2
IPR013516	Phytochrome chromophore binding site	PROSITE	PS00245	PHYTOCHROME_1	coord: 333..342 scor
IPR013654	PAS fold-2	PFAM	PF08446	PAS_2	coord: 84..200 score: 2.7
IPR013767	PAS fold	PFAM	PF00989	PAS	coord: 739..858 score: 3.5E-23coord: 629..697 score: 2.6
IPR016132	Phytochrome chromophore attachment domain	PROFILE	PS50046	PHYTOCHROME_2	coord: 233..403 score: 62
None	No IPR available	unknown	Coil	Coil	coord: 410..430 scor
None	No IPR available	GENE3D	G3DSA:3.30.450.20		coord: 757..858 score: 2.8E-9coord: 632..677 score: 6.
None	No IPR available	PANTHER	PTHR24423	TWO-COMPONENT SENSOR HISTIDINE KINASE	coord: 626..724 score: 0.0coord: 858..1108 score: 0.0coord: 126..554 score:
None	No IPR available	PANTHER	PTHR24423:SF519	PHYTOCHROME A	coord: 858..1108 score: 0.0coord: 126..554 score: 0.0coord: 626..724 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g05650	Cucsa.005340	Cucumber (Gy14) v1	cgycpeB0092
Cp4.1LG07g05650	CmaCh12G007050	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g05650	CmaCh05G009480	Cucurbita maxima (Rimu)	cmacpeB800
Cp4.1LG07g05650	CmoCh05G009670	Cucurbita moschata (Rifu)	cmocpeB753
Cp4.1LG07g05650	CmoCh12G006390	Cucurbita moschata (Rifu)	cmocpeB174
Cp4.1LG07g05650	Cla021900	Watermelon (97103) v1	cpewmB788
Cp4.1LG07g05650	Csa6G403050	Cucumber (Chinese Long) v2	cpecuB844
Cp4.1LG07g05650	MELO3C026502	Melon (DHL92) v3.5.1	cpemeB763
Cp4.1LG07g05650	ClCG08G009050	Watermelon (Charleston Gray)	cpewcgB756
Cp4.1LG07g05650	CSPI06G21040	Wild cucumber (PI 183967)	cpecpiB847
Cp4.1LG07g05650	Lsi08G007550	Bottle gourd (USVL1VR-Ls)	cpelsiB687
Cp4.1LG07g05650	MELO3C026502.2	Melon (DHL92) v3.6.1	cpemedB894
Cp4.1LG07g05650	CsaV3_6G036060	Cucumber (Chinese Long) v3	cpecucB1041
Cp4.1LG07g05650	Bhi04G000991	Wax gourd	cpewgoB1036
Cp4.1LG07g05650	CsGy6G020340	Cucumber (Gy14) v2	cgybcpeB882
Cp4.1LG07g05650	Carg21906	Silver-seed gourd	carcpeB0299
Cp4.1LG07g05650	Carg17627	Silver-seed gourd	carcpeB0193

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g05650	Cp4.1LG11g07630	Cucurbita pepo (Zucchini)	cpecpeB149

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g05650	Cucumber (Gy14) v1	cgycpeB0090
Cp4.1LG07g05650	Wild cucumber (PI 183967)	cpecpiB840
Cp4.1LG07g05650	Cucumber (Chinese Long) v2	cpecuB838
Cp4.1LG07g05650	Bottle gourd (USVL1VR-Ls)	cpelsiB692
Cp4.1LG07g05650	Watermelon (Charleston Gray)	cpewcgB750
Cp4.1LG07g05650	Watermelon (97103) v1	cpewmB784
Cp4.1LG07g05650	Melon (DHL92) v3.5.1	cpemeB758
Cp4.1LG07g05650	Cucumber (Gy14) v2	cgybcpeB878
Cp4.1LG07g05650	Melon (DHL92) v3.6.1	cpemedB899
Cp4.1LG07g05650	Cucumber (Chinese Long) v3	cpecucB1034