Cp4.1LG07g01220 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTGAAATTCTCCGAGAACCAAGACTATGAGGCGTTGCGCGAGCTGTTCAGACACCATATAGAATCGTTTGATCACCTCGTCGATGCGGGATTGGAGACTCTCATGAACAGCATCAAACCCGTCGAAATTTACGACTCCTTCACCGACAGAAAGCTTAGAAATATCCTTCATATGATTCTTTATGGCGTGGTTTTATTATTCTGTTATCTTTTANGGGGGGGGGGGGGGGGGGGGGGTTGATTTCTGGTGCATGTTTATTGCCTTGTTCTCTTGCTGTTACTTTGATTTGTCTGTTTAAACTGATGCATTGGACGAATCTCATCATACATTTGATAATTTTGCCCGGTCGATGTTAATCATTGACTTATAGTGGCGGAAAAGTAGATGGAGCTTTCTCTTCCATCCCCCTCACTGTTTTTCTCTTTGTAAGTTGGGAATTGGAGCATACGAGTGAGTGCAATCATGAATTTAGTAGTCGTAGCGTAGAAAAAATACATATTATTTTCCAATCAAGTAAATTTGGATGATGCACGTTCGAAGTATAAACATAGTGATGGATGGAGGGGTTTGATGTGGTGGCTTCAGAGCAATGTGGAGTTAGCTGTGGTGGCTTCATCCAATGTGCAAAGAAAACCATCAATGTAA ATGGTGGTGAAATTCTCCGAGAACCAAGACTATGAGGCGTTGCGCGAGCTGTTCAGACACCATATAGAATCGTTTGATCACCTCGTCGATGCGGGATTGGAGACTCTCATGAACAGCATCAAACCCGTCGAAATTTACGACTCCTTCACCGACAGAAAGCTTAGAAATATCCTTCATATGATTCTTTATGGCGTGAGCAATGTGGAGTTAGCTGTGGTGGCTTCATCCAATGTGCAAAGAAAACCATCAATGTAA ATGGTGGTGAAATTCTCCGAGAACCAAGACTATGAGGCGTTGCGCGAGCTGTTCAGACACCATATAGAATCGTTTGATCACCTCGTCGATGCGGGATTGGAGACTCTCATGAACAGCATCAAACCCGTCGAAATTTACGACTCCTTCACCGACAGAAAGCTTAGAAATATCCTTCATATGATTCTTTATGGCGTGAGCAATGTGGAGTTAGCTGTGGTGGCTTCATCCAATGTGCAAAGAAAACCATCAATGTAA MVVKFSENQDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTDRKLRNILHMILYGVSNVELAVVASSNVQRKPSM
BLAST of Cp4.1LG07g01220 vs. TrEMBL
Match: A0A0A0KFX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G400280 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-24 Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. TrEMBL
Match: A0A0B2RZ76_GLYSO (Putative DNA-directed RNA polymerase I subunit RPA2 OS=Glycine soja GN=glysoja_007421 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-13 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. TrEMBL
Match: M5Y2I5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024690mg PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.3e-13 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. TrEMBL
Match: A0A0B2RSS0_GLYSO (DNA-directed RNA polymerase subunit beta OS=Glycine soja GN=glysoja_043959 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.4e-12 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. TrEMBL
Match: K7MME1_SOYBN (DNA-directed RNA polymerase subunit beta OS=Glycine max GN=GLYMA_17G183400 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.4e-12 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. NCBI nr
Match: gi|700192550|gb|KGN47754.1| (hypothetical protein Csa_6G400280 [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24 Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. NCBI nr
Match: gi|449458081|ref|XP_004146776.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 5.3e-21 Identity = 51/55 (92.73%), Postives = 55/55 (100.00%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. NCBI nr
Match: gi|659089195|ref|XP_008445376.1| (PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis melo]) HSP 1 Score: 108.2 bits (269), Expect = 7.0e-21 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. NCBI nr
Match: gi|734415306|gb|KHN37718.1| (Putative DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1
BLAST of Cp4.1LG07g01220 vs. NCBI nr
Match: gi|596253118|ref|XP_007224731.1| (hypothetical protein PRUPE_ppa024690mg, partial [Prunus persica]) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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