Cp4.1LG06g10230 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG06g10230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pathogenesis-related protein 1
Location	Cp4.1LG06 : 10651817 .. 10652302 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATGCTAAAACTCTATTTATCTCTCTTTTATGTTTTGAGTATCACCGTATTTTCTTTCTCTTTTGGTCAAGATCTACCTCGAGACTATGTTGATGCTCACAATGTTGTTCGTGCCCAAGTGGGTGTCGAGCCTATCCAGTGGGATGAGAAACTAGCAAACTATGCTACGCAATATGCTAACAAACGTAGTAGTGATTGCCTACTATTGCACTCTCATGGGCCTTATGGAGAGAATCTTGCAATAAGTACCGGTGAAATGTCTGGCATTGAAGCAGTTCAAATGTGGGTGGATGAAGAACAATTCTATGATTATAACTCCAATACATGCGTTGATGACGAAATGTGTAGCCACTACACTCAAGTGGTATGGAGGAATTCGATGAGAGTTGGATGTGCGAAAGTTAGCTGTAACAATGAAGGTACATTCATCATTTGCAGTTATGATCCACCTGGCAATTTCATAGGCGAGTGGCCATACTAA

mRNA sequence

ATGAGTATGCTAAAACTCTATTTATCTCTCTTTTATGTTTTGAGTATCACCGTATTTTCTTTCTCTTTTGGTCAAGATCTACCTCGAGACTATGTTGATGCTCACAATGTTGTTCGTGCCCAAGTGGGTGTCGAGCCTATCCAGTGGGATGAGAAACTAGCAAACTATGCTACGCAATATGCTAACAAACGTAGTAGTGATTGCCTACTATTGCACTCTCATGGGCCTTATGGAGAGAATCTTGCAATAAGTACCGGTGAAATGTCTGGCATTGAAGCAGTTCAAATGTGGGTGGATGAAGAACAATTCTATGATTATAACTCCAATACATGCGTTGATGACGAAATGTGTAGCCACTACACTCAAGTGGTATGGAGGAATTCGATGAGAGTTGGATGTGCGAAAGTTAGCTGTAACAATGAAGGTACATTCATCATTTGCAGTTATGATCCACCTGGCAATTTCATAGGCGAGTGGCCATACTAA

Coding sequence (CDS)

ATGAGTATGCTAAAACTCTATTTATCTCTCTTTTATGTTTTGAGTATCACCGTATTTTCTTTCTCTTTTGGTCAAGATCTACCTCGAGACTATGTTGATGCTCACAATGTTGTTCGTGCCCAAGTGGGTGTCGAGCCTATCCAGTGGGATGAGAAACTAGCAAACTATGCTACGCAATATGCTAACAAACGTAGTAGTGATTGCCTACTATTGCACTCTCATGGGCCTTATGGAGAGAATCTTGCAATAAGTACCGGTGAAATGTCTGGCATTGAAGCAGTTCAAATGTGGGTGGATGAAGAACAATTCTATGATTATAACTCCAATACATGCGTTGATGACGAAATGTGTAGCCACTACACTCAAGTGGTATGGAGGAATTCGATGAGAGTTGGATGTGCGAAAGTTAGCTGTAACAATGAAGGTACATTCATCATTTGCAGTTATGATCCACCTGGCAATTTCATAGGCGAGTGGCCATACTAA

Protein sequence

MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY

Homology

[Close]

BLAST of Cp4.1LG06g10230 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.9e-49
Identity = 89/162 (54.94%), Postives = 120/162 (74.07%), Query Frame = 1


Query: 2   SMLKLYLSLFYVLSITVFSFSF-GQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 61
           S L  +L +  +L   V S S   Q+  +DY+DAHN  RA VGVEP+ WD+++A YA  Y
Sbjct: 7   SQLPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNY 66

Query: 62  ANKRSSDCLLLHSHGPYGENLAISTGE-MSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSH 121
           A++ ++DC L+HSHG YGENLA  +G+ M+  +AV+MWVDE+Q+YD++SNTC   ++C H
Sbjct: 67  ASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGH 126

Query: 122 YTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           YTQVVWRNS+RVGCA+V CNN G  + C+YDPPGN+ GE PY
Sbjct: 127 YTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cp4.1LG06g10230 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.7e-48
Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 25  QDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDCLLLHSHGPYGENLAIS 84
           QD  +DYV+AHN  R+Q+GV P+QWDE LA YA  YAN+   DC L+HS GPYGENLA S
Sbjct: 27  QDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS 86

Query: 85  TGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNSMRVGCAKVSCNNEGTF 144
            G++SG+ AV +WV+E+  Y+Y++NTC  + +C HYTQVVWRNS+R+GCAKV CNN GT 
Sbjct: 87  GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTI 146

Query: 145 IICSYDPPGNFIGEWPY 162
           I C+YDPPGN+  + PY
Sbjct: 147 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.5e-48
Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 1


Query: 3   MLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYAN 62
           M   +L    +L + +   S  Q+  +DY+DAHN  RA VGVEP+ WD  +A YA  Y +
Sbjct: 9   MPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVS 68

Query: 63  KRSSDCLLLHSHGPYGENLAISTGE-MSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYT 122
           + ++DC L+HSHG YGENLA  +G+ M+  +AV+MWVDE+Q+YD++SNTC   ++C HYT
Sbjct: 69  QLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYT 128

Query: 123 QVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           QVVWRNS+RVGCA+V CNN G  + C+YDPPGN IG+ PY
Sbjct: 129 QVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cp4.1LG06g10230 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.5e-48
Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 1


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           M  L   ++ F   +I + S S  Q+ P+DY++ HN  R QVGV P+ WD +LA YA  Y
Sbjct: 1   MGFLTTIVACFITFAILIHS-SKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           AN+R  DC ++HSHGPYGENLA +  +++   AV+MWVDE++FYDYNSN+CV   +C HY
Sbjct: 61  ANQRIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           TQVVWRNS+R+GCA+V  NN   FI C+YDPPGNFIG+ P+
Sbjct: 121 TQVVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cp4.1LG06g10230 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-46
Identity = 82/160 (51.25%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 3   MLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYAN 62
           M   +L    +L + +      Q+  +DY+DAHN  RA VGVEP+ WD+++A YA  YA+
Sbjct: 9   MSSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYAS 68

Query: 63  KRSSDCLLLHSHGPYGENLAISTGE-MSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYT 122
           + ++DC L+HSHG YGENLA  +G+ ++  +AV+MWV+E+Q+Y ++SNTC   ++C HYT
Sbjct: 69  QLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYT 128

Query: 123 QVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           QVVWRNS+RVGCA+V CNN G  + C+YDPPGN IG+ PY
Sbjct: 129 QVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Cp4.1LG06g10230 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.9e-54
Identity = 98/159 (61.64%), Postives = 123/159 (77.36%), Query Frame = 1


Query: 4   LKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANK 63
           L L LSLF VL+  +   S  QD P+D++DAHN  RAQ GVEP+QWDE +A++A QYAN+
Sbjct: 6   LSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQ 65

Query: 64  RSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQV 123
           R +DC L+HS GPYGEN+A    ++SG  AV+MWV+E++FYDY SNTC    +C HYTQV
Sbjct: 66  RINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQV 125

Query: 124 VWRNSMRVGCAKVSC-NNEGTFIICSYDPPGNFIGEWPY 162
           VWRNS+R+GCAKV C NN GTFI C+YDPPGNF+G+ PY
Sbjct: 126 VWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cp4.1LG06g10230 vs. TrEMBL
Match: V4U9J3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.9e-53
Identity = 96/155 (61.94%), Postives = 122/155 (78.71%), Query Frame = 1


Query: 8   LSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSD 67
           L LF +L + +   S  QDLP+DYV+AHN  RAQVGV P+ WD+++A+YA  YANKR  D
Sbjct: 9   LPLFCILGLALILSSHAQDLPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANKRKGD 68

Query: 68  CLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRN 127
           C L+HS GPYGENLA S+  +SG +AV++WV+E+  YDYNSNTC   ++C HYTQVVWR 
Sbjct: 69  CNLVHSGGPYGENLAWSSAGLSGTDAVKLWVNEKADYDYNSNTCAAGKVCGHYTQVVWRK 128

Query: 128 SMRVGCAKVSC-NNEGTFIICSYDPPGNFIGEWPY 162
           S+R+GCAKV+C NN+GTFI C+YDPPGNF+GE PY
Sbjct: 129 SVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of Cp4.1LG06g10230 vs. TrEMBL
Match: A0A0A0K7P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.1e-53
Identity = 97/162 (59.88%), Postives = 124/162 (76.54%), Query Frame = 1


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           M M+ L L  F   S  +F+ S  QDLP+++VDAHN  RAQVGV P+ WDE +ANYA QY
Sbjct: 5   MKMISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANYAQQY 64

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           AN+  +DC ++HS+GPYGENLA S+ ++SG  AVQMWV+E+QFYDY SN+CV  E C HY
Sbjct: 65  ANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSE-CRHY 124

Query: 121 TQVVWRNSMRVGCAKVSCNNE-GTFIICSYDPPGNFIGEWPY 162
           TQVVW+NS+++GCAKV CNN  GTFI C+YDP GN++ + PY
Sbjct: 125 TQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of Cp4.1LG06g10230 vs. TrEMBL
Match: A0A087GJF2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G205200 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52
Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 1


Query: 13  VLSITVFSFSF----GQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDC 72
           +L+ T+F         QD P+D+V AHN  RA+VGV P++WDE +A YA  YAN+R  DC
Sbjct: 11  ILATTIFLVFIVSLRAQDRPQDFVAAHNRARAEVGVGPLRWDETVAAYARNYANQRKGDC 70

Query: 73  LLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNS 132
            L HS GPYGENLA S+G MSG+ AV+MWVDE+  YDY+SNTC  D++C HYTQVVWRN+
Sbjct: 71  ALQHSSGPYGENLAWSSGSMSGVAAVKMWVDEQADYDYDSNTCAWDKICGHYTQVVWRNT 130

Query: 133 MRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
            RVGCAKV CNN  TFI C+YDPPGN++GEWPY
Sbjct: 131 ERVGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG06g10230 vs. TrEMBL
Match: B9S7V4_RICCO (STS14 protein, putative OS=Ricinus communis GN=RCOM_1381980 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52
Identity = 90/154 (58.44%), Postives = 122/154 (79.22%), Query Frame = 1


Query: 8   LSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSD 67
           L+L  ++SI +   S  QD  +DY++AHN  R  VG+ P+ WD+K+A+YA  +AN+  SD
Sbjct: 8   LALVCIISIALIFSSHAQDTQQDYLNAHNSARGDVGLGPLTWDDKVASYAQHHANQHKSD 67

Query: 68  CLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRN 127
           C L+HS GPYGENLA S+G++SG +AV+MW+DE+ +YDYNSN+C   ++C HYTQVVWR+
Sbjct: 68  CSLVHSEGPYGENLAWSSGDLSGTDAVKMWIDEKPYYDYNSNSCASGQICGHYTQVVWRS 127

Query: 128 SMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           S+R+GCAKVSCNN GTFI C+YDPPGN+IG+ PY
Sbjct: 128 SVRLGCAKVSCNNGGTFIGCNYDPPGNYIGQRPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 204.9 bits (520), Expect = 3.7e-53
Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 1


Query: 2   SMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYA 61
           S   L+L++ + L + V   +  QD P+D++  HN  RA+VGV P++WDEK+A YA  YA
Sbjct: 6   SSQNLFLAITFFLVLIVHLKA--QDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYA 65

Query: 62  NKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYT 121
           N+R  DC + HS G YGEN+A S+G M+G+ AV MWVDE+  YDY+SNTC  D+ C HYT
Sbjct: 66  NQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYT 125

Query: 122 QVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           QVVWRNS R+GCAKV CNN  TFI C+YDPPGN++GEWPY
Sbjct: 126 QVVWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-52
Identity = 87/163 (53.37%), Postives = 129/163 (79.14%), Query Frame = 1


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           MS+LK   ++ ++L+I +F  S  +DL + +++AHN  R +VG++P+ WD+++A YA  Y
Sbjct: 1   MSLLKT--NILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE--MCS 120
           AN+R +DC L+HS+GP+GEN+A+S+GEMS  +A +MW++E+Q+YDY+SNTC D     C 
Sbjct: 61  ANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCL 120

Query: 121 HYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           HYTQVVW+N++R+GCAKV CN+ GTFI C+YDPPGN+IGE P+
Sbjct: 121 HYTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 191.8 bits (486), Expect = 3.2e-49
Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 25  QDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDCLLLHSHGPYGENLAIS 84
           QD  +DYV+AHN  R+Q+GV P+QWDE LA YA  YAN+   DC L+HS GPYGENLA S
Sbjct: 27  QDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS 86

Query: 85  TGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNSMRVGCAKVSCNNEGTF 144
            G++SG+ AV +WV+E+  Y+Y++NTC  + +C HYTQVVWRNS+R+GCAKV CNN GT 
Sbjct: 87  GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTI 146

Query: 145 IICSYDPPGNFIGEWPY 162
           I C+YDPPGN+  + PY
Sbjct: 147 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR10
Match: AT5G26130.1 (AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-45
Identity = 84/156 (53.85%), Postives = 103/156 (66.03%), Query Frame = 1


Query: 13  VLSITVFSFSFG-----QDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSD 72
           +LS+ V   +F      QD P+DY+D HN  R QVGV P++W      YA  YA +R  D
Sbjct: 11  ILSVIVLFLAFAVPLKAQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGD 70

Query: 73  CLLLHSH--GPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVW 132
           C L HS+  G YGENLA S G +SG EAV++WV+E+  Y Y SNTC D + C HYTQVVW
Sbjct: 71  CSLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVW 130

Query: 133 RNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           R S  VGCAKV C+N GTF+ C+Y PPGN+ G WPY
Sbjct: 131 RTSEWVGCAKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-45
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 1


Query: 7   YLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSS 66
           +L +F  L   +   S  QD P+DY+  HN  R  VGV P+QWDE++A YA  YA +   
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 67  DCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWR 126
           +C L+HS GPYGENLA  +G++SG+ AV MWV E+  Y+Y +NTC  + +C HYTQVVWR
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWR 128

Query: 127 NSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
            S+R+GCAKV CNN GT I C+YDP GN++ E PY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 7.0e-54
Identity = 98/159 (61.64%), Postives = 123/159 (77.36%), Query Frame = 1


Query: 4   LKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANK 63
           L L LSLF VL+  +   S  QD P+D++DAHN  RAQ GVEP+QWDE +A++A QYAN+
Sbjct: 6   LSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQ 65

Query: 64  RSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQV 123
           R +DC L+HS GPYGEN+A    ++SG  AV+MWV+E++FYDY SNTC    +C HYTQV
Sbjct: 66  RINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQV 125

Query: 124 VWRNSMRVGCAKVSC-NNEGTFIICSYDPPGNFIGEWPY 162
           VWRNS+R+GCAKV C NN GTFI C+YDPPGNF+G+ PY
Sbjct: 126 VWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: gi|568866976|ref|XP_006486822.1| (PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis])

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 96/155 (61.94%), Postives = 123/155 (79.35%), Query Frame = 1


Query: 8   LSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSD 67
           L LF +L + +   S  QD P+DYV+AHN  RAQVGV P+ WD+++A+YA  YAN+R  D
Sbjct: 9   LPLFCILGLALILSSHAQDSPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANQRKGD 68

Query: 68  CLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRN 127
           C L+HS GPYGENLA S+  +SG +AV+MWV+E+  YDYNSNTC + ++C HYTQVVWRN
Sbjct: 69  CNLVHSGGPYGENLAWSSAGLSGTDAVKMWVNEKADYDYNSNTCAEGKVCGHYTQVVWRN 128

Query: 128 SMRVGCAKVSC-NNEGTFIICSYDPPGNFIGEWPY 162
           S+R+GCAKV+C NN+GTFI C+YDPPGNF+GE PY
Sbjct: 129 SVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: gi|567860120|ref|XP_006422714.1| (hypothetical protein CICLE_v10029431mg [Citrus clementina])

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 96/155 (61.94%), Postives = 122/155 (78.71%), Query Frame = 1


Query: 8   LSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSD 67
           L LF +L + +   S  QDLP+DYV+AHN  RAQVGV P+ WD+++A+YA  YANKR  D
Sbjct: 9   LPLFCILGLALILSSHAQDLPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANKRKGD 68

Query: 68  CLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRN 127
           C L+HS GPYGENLA S+  +SG +AV++WV+E+  YDYNSNTC   ++C HYTQVVWR 
Sbjct: 69  CNLVHSGGPYGENLAWSSAGLSGTDAVKLWVNEKADYDYNSNTCAAGKVCGHYTQVVWRK 128

Query: 128 SMRVGCAKVSC-NNEGTFIICSYDPPGNFIGEWPY 162
           S+R+GCAKV+C NN+GTFI C+YDPPGNF+GE PY
Sbjct: 129 SVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: gi|659110133|ref|XP_008455066.1| (PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 3.5e-53
Identity = 98/162 (60.49%), Postives = 127/162 (78.40%), Query Frame = 1


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           + M+ L L LF++ S T+F+ S  QD P+D+VDAHN  RAQVGV P+ WDE +ANYA QY
Sbjct: 5   LKMISLSL-LFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYAQQY 64

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           AN+  +DC ++HS+GPYGENLA S+ ++SG  AVQMWV+E+QFYDY SN+CV  E C HY
Sbjct: 65  ANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSE-CRHY 124

Query: 121 TQVVWRNSMRVGCAKVSCNNE-GTFIICSYDPPGNFIGEWPY 162
           TQVVW+NS+++GCAKV CNN  GTFI C+YDP GN++ + PY
Sbjct: 125 TQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 5.9e-53
Identity = 98/159 (61.64%), Postives = 123/159 (77.36%), Query Frame = 1


Query: 4   LKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANK 63
           L L LSLF VL+  +   S  QD PRD+V+AHN  RAQVGV P+ WDE++A++A QYAN+
Sbjct: 6   LSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQ 65

Query: 64  RSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQV 123
           R +DC L+HS GPYGEN+A    ++SG  AVQMWV+E+QFY+Y SNTC   ++C HYTQV
Sbjct: 66  RINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQV 125

Query: 124 VWRNSMRVGCAKVSC-NNEGTFIICSYDPPGNFIGEWPY 162
           VWRNS+R+GCAKV C NN GTFIIC+Y+P GN IG+ PY
Sbjct: 126 VWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g10230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1A_TOBAC	8.9e-49	54.94	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PRB1_ARATH	5.7e-48	60.58	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1B_TOBAC	7.5e-48	53.13	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PRB1_TOBAC	7.5e-48	54.66	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1C_TOBAC	1.4e-46	51.25	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]

BLAST of Cp4.1LG06g10230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A4_CUCSA	4.9e-54	61.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
V4U9J3_9ROSI	1.9e-53	61.94	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1	[more]
A0A0A0K7P0_CUCSA	7.1e-53	59.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1	[more]
A0A087GJF2_ARAAL	1.2e-52	62.09	Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G205200 PE=3 SV=1	[more]
B9S7V4_RICCO	1.6e-52	58.44	STS14 protein, putative OS=Ricinus communis GN=RCOM_1381980 PE=3 SV=1	[more]

BLAST of Cp4.1LG06g10230 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	3.7e-53	57.50	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	1.8e-52	53.37	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	3.2e-49	60.58	basic pathogenesis-related protein 1	[more]
AT5G26130.1	1.7e-45	53.85	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	1.7e-45	52.90	pathogenesis-related gene 1	[more]

BLAST of Cp4.1LG06g10230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724783\|ref\|XP_011658861.1\|	7.0e-54	61.64	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|568866976\|ref\|XP_006486822.1\|	1.2e-53	61.94	PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis]	[more]
gi\|567860120\|ref\|XP_006422714.1\|	2.7e-53	61.94	hypothetical protein CICLE_v10029431mg [Citrus clementina]	[more]
gi\|659110133\|ref\|XP_008455066.1\|	3.5e-53	60.49	PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo]	[more]
gi\|659110129\|ref\|XP_008455064.1\|	5.9e-53	61.64	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g10230.1	Cp4.1LG06g10230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 93..106 score: 2.8E-19coord: 144..157 score: 2.8E-19coord: 117..133 score: 2.8E-19coord: 47..65 score: 2.8
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..161 score: 4.6
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 28..161 score: 2.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..149 score: 4.2
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..157 score: 5.4
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 20..161 score: 4.06
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 144..155 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..161 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG06g10230	CmoCh09G013400	Cucurbita moschata (Rifu)	cmocpeB035

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG06g10230	Cucumber (Gy14) v1	cgycpeB0084
Cp4.1LG06g10230	Cucurbita maxima (Rimu)	cmacpeB062
Cp4.1LG06g10230	Wild cucumber (PI 183967)	cpecpiB792
Cp4.1LG06g10230	Cucumber (Chinese Long) v2	cpecuB792
Cp4.1LG06g10230	Bottle gourd (USVL1VR-Ls)	cpelsiB650
Cp4.1LG06g10230	Watermelon (Charleston Gray)	cpewcgB712
Cp4.1LG06g10230	Watermelon (97103) v1	cpewmB762
Cp4.1LG06g10230	Melon (DHL92) v3.5.1	cpemeB708
Cp4.1LG06g10230	Cucumber (Gy14) v2	cgybcpeB696
Cp4.1LG06g10230	Melon (DHL92) v3.6.1	cpemedB842
Cp4.1LG06g10230	Cucumber (Chinese Long) v3	cpecucB0980