Cp4.1LG06g09390 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG06g09390
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAtp-dependent rna helicase
LocationCp4.1LG06 : 7556147 .. 7563498 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTCAACCTGTCGCGCCCACTGATTCGAGCATGTGAGGCTTTGGGATATGCAAAGCCGACGCCAATTCAGGTTCTTTTTCTATGATTTTTGTTTTTATTTTATTTATTTTATAGTATTGAATTTTATGTTCTTACTAATCTTGTTGGGTAGGCGGCTTGCATACCGTTGGCATTGACTGGACGTGATATATGTGGAAGTGCAATTACTGGTTCTGGAAAGGTATGGGTTTATCTTGAGCTTTCTTTGTAGTTAACTGTTACGAGAATTAGAGTTGTTGGAATAGGATGGTAGTTCTTGCTTTCGGGGAATTTGTTTTATGAACTATTGCAGAAATTCTATAAGCTGGACGACTACATAATGATTTGGAAAAGATGTGTGAAAGCCCTAGGATTGCTTTTAATCTTACCTTGTTCTCACAGACTGCAGCTTTTTCGCTACCTACTTTGGAGAGGTTACTCTATCGGCCCAAACGTGATCGTGCGATAAGAGTTTTAGTCCTAACTCCAGCTAGAGAATTGGCAATCCAGTAAGTATGTTTTTAAAGATACGTATTCTTTATCATGTGTTTTCATATAATCAACCAATTTAGATGTCAGTTAAAATTCAGTCTACATATATATATCTTGAGGGAAAGTTGTTGGATAGCTTTTTAATGAAGTGCCCAGTTTTAGTTCTTGCACGTCCATCACCTTGATAAAACATGGTCTCATTTTTTCTTGCAAAATGCAAATTTGATGCTGTCATTTATGGTTTCCATAATAAATGACAACTGAAAAACTATATTTCGATATTGATATAAATATTTGGTGGTATTCTCTGAGAATTCTGTTCTAGGCTATATTGGCTAGGCGACCATATTTTAAAATACAAGACAAATATCTTGTGGCTCAATGCTTGCTTAGGCTATGTTGTAGGAAATATCACTTGAAAGATATTGAAGAAGCTTTTAAGGGCTAGATTCTGATTGGTTAAGAAGCTTTAAAGGGTTAGAATGAATTCATGGAAGTCTCTAGAGTAATGGAGAAAGGTTTGGATGCAGGATAAAATAAAACTGATTTCAGGAAGTTGTGGAAAAAGAAAGAGAGGAAATGGCATAGGAAGTAAGAAGAGACAAAGATGAGAGAGATAATAATATTAAGAAGTGTGAAATAGTGTGGTGTATCAAGATAAGTTGGAAAAAAATATTAGAGGAAAAGGCAAAAGAAAGAGTGGTTTGAAGGAAAAAAAACAAAGTAGGAGGTAAAGAAAAGGGAGAAAAAGAGAACGAAGGGGACTGTTGTTGAAAAAGAAGAAGAAAAGTTGGTGGAAAAATGAGTGTGTGTGTGAAAGATGAAAGATGAAAGAGTGAAAAATATAGAGGTTGTAATCTCTCAGATTCACGACATCCACCTGTTTTGGGTTCAAGGCGTTCCCATATTTTTACCATGTTTCTTGGTTTTTCTTTTCAATCTCAATTGTAGTGTTGGAGTTTTTTTTGGAAGAGATTATTTAAATGTGGGAGATAAGAAAGAATCAGTGAACTAAAAAGAATAGCAATGGAAAAAGGATCCCTTAAATCAACTTTTTGTCTCCCTACGCTTGAGTGAAGCAATCAGATTTGTTGCATTGAGGTGCTAGCACTTTTAAAAAACTCTTTTTTTAGTTCAGGGCTTTTTTTGGTCATTGGAGTGGAGATTTGTGATTCAAGCGACATTATTATTGTTTTCCTTTTGTCACAAACAATGTTACAAAAAACTCCTGGTTTGGAGAATATTAAAGCAGCCCTAAAGAACCTTCCAAAAGATAATAAAATCTCTCTCCCCCCCCCAAAACTGAAAGACAAAACCCGAAAAACTATTCACCTAGATTTTGAAAACTATATAAAACCCCCGCTGAGGACATGCACATTGTAACACCACATTATGAACCTCTGACCACCCTTTGGAGAAGCTAAAGAAAGGGTAAGTCTAATATGAAGCCCTAAAAGAACTCCAATCGGAAGCATGTGCCTCACTAACTTCATGATAAGCCTCAATCAATAAGAACATGGTTTGAGAGATTCTACAACCCATATTTTATACCTAAAGCATGGCCCACTTCTCCCAAGGGCAGAAGAGTTGCAATATTATCGTCTTTGACCACCTAATGTCTCCTTGTATAAAAGCTATATTTTATTTAGTGCCCAATTAGACACAAAACAAAAGCTGAGCATGCTTTGAAAGATCTATTTTGTACACGTATTCCTCCTCTACATTTTCATGTTAATACTAACTGAAAATAAGGAAATTTTGCTGTTTTTTTCCTCCAGAGTTCACAGTATGATAGAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATCGTTGGTGGGCTTTCAAGAAAGGTATGACCTAGTGTACTTTGGTGACTAAAGAAGAAGTTTGAAATTTCTACATATATAACATTTACTGGGATTCTAATTCTATATTGTAATTTTGTTTTAAAAAATTCGTTATGTATTCCTTTACATGATATATCACGGTCCTGTTTCATCATAATGTGAGGTTTTAGTGAAGAATCAAAATTCATTACTACAGGGGTTTTGACTCATTTTTCCACGAAGTATGGTTGATTTTGCTCTCCTTTCTTTGGTTAAGGATATTTTATTTTCTTAATTTTGTTCAGGAGCAAGAGGCTGCCTTAAGATCGATGCCTGATGTGGTTGTGGCCACTCCAGGACGCATGATCGATCATCTACGCAATTCCATGTCCGTAGACTTGGACGATTTAGCAGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCCGAAATTCGTGAATTGGTATATTTTGGCCTCTATTGTGCAATTTTAATGACGGAGATTGTGTTCTTTGATACATCTATTTTTAGGTTTTGGTATAAAGAGTTATTAATTTTCTTTAAAGGTTCGTCTTTGCCCAAAAAGGAGGCAGACAATGTTGTTTTCTGCTACCATGACAGAAGAAATTGATGAGCTTATCAAGCTTTCCTTGACTAAACCATTGCGCCTCTCAGCTGACCCAGCTACCAAGAGGCCAAAAACATTGACAGAAGAGTAATTTCCAACTTGATTTCTCCTCTAAAATTTGTTTATTAATTTATAAGCATATCTTAACCTGAGAGCATCTTATCTGCCGGATGATTTTTTAGTTATCAAGAATGTGTATTCCGCTTGCAGGGTGGTCAGGTTACGTAGAATGCGTGAAGTAAATCAGGAAGCTGTCCTCCTTGCTCTGTGCTCAAAGACATTTACTTCTAAAGCTATTATATTTAGGTATTAGAAACAAAAAGTTCGCGAGCAACTTTGTTTTTGGATCCTTTTAATTGGAGGGTTGCATCTAATTGTTTTACTAAGTCACGTATCTGACAGAGGTCCATTTTCCAGACTTAAAAGCAATCATCCTCTAGATCGAAACTGAGTCTAGTTAATTTAATGTTTTATTATTTTGTTTTCTGTATAACTAGTGAATTTTAACTTCATCATTCTTTTTGGTTGACCTGTAGTGGAACCAAACAGGCTGCTCATAGACTAAAGATTTTATTTGGATTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGAAATCTTACCCAAGTTCAGCGTCTTGATGTGAGTGATTGCTTGTTAACATGTTTAAGGTTGGAATCATTAAATCATCCCCTTAGTTTTCCCCTCTGTATGCTGATCATTATTTTGATTTTTTTATGTAGGCTTTGGAACTCTTCAGGAAACAGCAAGTTGATTATCTTATTGCTACTGATGTGGCTGCTCGGGTGAGAACTCATTTTTAATGTTGTTTCTCGTCCTGTAGATATACAATATAGTTGAGAAAAAATCAGCTACATTAGTTTTACTGATATGTTTTCGTGCAATTTATGCTTTGGTTGAAATGTTGTGTAGGGCCTGGATATTATTGGTGTTCAAACTGTTATAAACTTTGCCTGTCCTCGTGATCTTACCAGGTAGGTATTGGGTTCTGGATTGTGTTATTTGTCACCGCGCAACCATATTTACTATTATTGGCATCGCATTCTTATTTTCTCTTCAATGGAGTATTCACTTTTTATTTTGTTTTACACTGCATTTATGTATCTTTCATCTTCGTTGAATGTTTCTCATAAAAAAATAATAAAAAAGAACGTACTCATCTGTTTTCTTTTTCTTTTATTCTTTCTGGAGCAATGAGTGGCTTTCTAAAACCCTTGGTTTGGAAATTCTGCATATGATTTGTGCCAATGATTCTTGTTGACTTCCAAGCATTCTTATGCTGAAAGGAATGCCTGTGATTTTTCCCCATAATACTTACCCTTCATTTCCTTTCCCTCTTCAAATATCTTTTTAATTTCATATTTTCTTTGGAAATTATGTTTTTTTATTTTTATTTTTAATTACAACACTATTTTAGAAATGTTGAAATTTAAACTTTTCCTTTAGTATTCTATGCATCGAAGTGCTGTAATGTCACAAGTACAACATTCCCAATCATGTTTTGACACTTGTTTCTTTCATTCCGACTTCTCATTCTTATCTACCTTATTTTTTAGGCATCTTTTATGAAAATTTCATGACTCCTTGAATCAAATAACCCCTTGTAAATTTATATTAAGGCATGCATCAACCATTTTTATATTTATTATATTTGANATTCCGACTTCTCATTCTTATCTACCTTATTTTTTAGGCATCTTTTATGAAAATTTCATGACTCTTTAAGGCATGCATCAACCATTTTTATATTTATTATATTTGATTAATGGAGTTGATTATGTTCTTAACTTTCATGTTTTTGTAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGTAGAGAAGGATATGCTGTTACCTTTGTGACTGACAATGACCGTTCTCTTTTAAAAGCCATAGTGAGTGACTACCAATTCATTTGGAATAGAAAATAAAAAATCGAAAGTTACAGCCTTTTATAAGAAATCTTTTGGGACATGAGGGGTTGTTCATTTTATGCTGTCTGGAATCTGTTTACAAGGGGTTGTTTCTTATGAATTCGGGTTGGAATTTGTGGCCTGGTTTTTGTCGGACATTTAAGGCCTTCTTTCATTGTTCTTCATACAAGTCTTGTTTATTCTGAATTAATAGTGGGTCTTGACTTCAAATGACAGGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCAGAATTGTTGCTGAGCAATCCATAAAAAAGTGGTCTGAAATGATTGAAGGAATGGAAGATCAAGTGAATATGATTCTTCGGGAAGAGAGGTTTTATCTGGTTTCTCTTCTTGTTTGTCCAATTCCCTTTCATTCTAGTCTTAATTTAATTTTTTTTGTAGAGAAGAGAGAGCTCTAAGGAAAGCTGAAATGGAAGCAACAAAGGTATTAGTCTTCATACTTATCTCTCTTTCATCTTTAAGTTGCATCATGAGTTGGCAGTTTTTACATCACATACCCTCTACTTTTACTGGAAATTTTAATCAACTCTGGTTAATATTTGCTCTTTCTTTGTGTACTCAGGCAGAAAACATGATTGTTCATCAGGAAGAGATTTTTTCACGCCCTAAAAAAACCTGGTTTATAACGGACAAGGAGAAAAAGCTTGTGGCAAAAGCAGCCAAGGTAAGTACTTGTTGCTGTATATGCTAGAAAAATCTAATGTTTGCAACAAAGGTTGGAAGTTTCCTGATTATGTGATGTGGACTTGGGGCTCTTAAGCTTCAGCTTTCCTTTATGATAATCTGTTTCCTTGTCTGAAACATGTCTTGTTATACATGCAGTGTTTCAAGTTAGCTCAATTTCTTTCCATGATTTTCCTCAAATGAAACATCGTGCTTTGCAAGAGCCTATGTTTTGACGTTTTCAACTTTTACTTCTGTTGAAAGAGGAGGAGTTGCTCTCCTTGTCAAAGCCAAAAACTTATTTGTTTTATTTTCTTTGAAATTGTTGAAATGTTAAATTACTTGAGCACTAGATTCTTTGCCTGTTTCTAAATTTTAGTATGAAACATGGTCTGTTCATCAGATAATTGTGCTCTTTCTATCTTTTCCTCTCAACTAGACATCTCTGGAAAAAGGAAAGACGTCTGGGAACGAAGTCGTAAGTGCACAACATGCCGAAGACCTTAAGATGAAAGAAAAAAGGAAGCGCGAGCGTGAGGTGCCCGAACATTGCATGAACTAGAACATTCTTTATATATTTTGAAGTTGTCAAGTTTAAAGTAATGACCCTAAATGGTACTTTTGATGATATCTATGATTCGAGCAGAAAAATTTGCCGAGGAAGAAGCGTAGGAAATTGGAAGCAGCTAGAGAAATGTTGGAGGAGGAGAAGCAAAATGGCAAAACAGGAGTATGACTTTTCCTATTTCATCCATTGTCACGTTTAAATAGTTTACTTCTTATCCATGCGATATTATATATCAAGCAATGAAGTAAAAAGATCAAGTTACCCTACAAGTGCCCCTATCATTTGTGGTTTATCACACAATTACAATAACTGCAGGGTGGGGGAGAAAATAAGAAAGACAAATCTGGATTGTCGCTCGTGAAACTTGCATACCGTCGAGCAAAAGCAGTAAAGGCTGTGAACAAGGCGCTTGACTCGGGCAAGATTGTGAAGCAAAACCAGAAAACTAAGAAGTCTTCCCACAGAACTCAATCAAGATCCGAGGAGATGCGAGAGATGTTCCAAAATGATATGAGCGAGCAGAAGCAGAAACGACATGGCAGTGGCGGTGCTGGGATGAAAAAGTCTAAGCATTCCTTCAAAAGCAAGTCAAGGTACAAACCACTAATAAAACTTTTATTCAACCTTCTTCATGATAATAAGGGCGTGTAAATTAATGTTGTGGATGCTTTTGAATGTGTTCTTTTAGGTACAAGCGTAAATAGAAACTCTACTTGGATGTCGATTGGCCTTGTGTTTGCACGGGAACGGTGGCAACGTTAAGTTTGCTATCTGCATTCCTTGCACCAGTTTTGATGGCAGATGGGGTGGTTGTATATTTCTTTCCCTCAAAGTTGATTGCTCTCGGTCGGTTGTGACGTGCGTCGAGAGTCGAAATGCACCATCAACCTGCTGAAGCATAACCTAGTAACACAAATTTGATTTATAGAGATTTGTTGTACCATGAGAAGGAAAACAACTGGAATGAATGGTTATTAGTTTTTCAAATTTTTAGGCTGCCTAGTTCGAATTATTTATTTCATGATTATGCATCATCTCATTGAACTATGATTTTTATTTTGAGATTTCGTGCATGTTGTATGTCGTATGATTATGAATTAGTTCTCTAACATGTTATGAATGAATACATATACTTCGATATTATTC

mRNA sequence

ATGGAGCTCAACCTGTCGCGCCCACTGATTCGAGCATGTGAGGCTTTGGGATATGCAAAGCCGACGCCAATTCAGGCGGCTTGCATACCGTTGGCATTGACTGGACGTGATATATGTGGAAGTGCAATTACTGGTTCTGGAAAGACTGCAGCTTTTTCGCTACCTACTTTGGAGAGGTTACTCTATCGGCCCAAACGTGATCGTGCGATAAGAGTTTTAGTCCTAACTCCAGCTAGAGAATTGGCAATCCAAGTTCACAGTATGATAGAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATCGTTGGTGGGCTTTCAAGAAAGGAGCAAGAGGCTGCCTTAAGATCGATGCCTGATGTGGTTGTGGCCACTCCAGGACGCATGATCGATCATCTACGCAATTCCATGTCCGTAGACTTGGACGATTTAGCAGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCCGAAATTCGTGAATTGGTTCGTCTTTGCCCAAAAAGGAGGCAGACAATGTTGTTTTCTGCTACCATGACAGAAGAAATTGATGAGCTTATCAAGCTTTCCTTGACTAAACCATTGCGCCTCTCAGCTGACCCAGCTACCAAGAGGCCAAAAACATTGACAGAAGAGGTGGTCAGGTTACGTAGAATGCGTGAAGTAAATCAGGAAGCTGTCCTCCTTGCTCTGTGCTCAAAGACATTTACTTCTAAAGCTATTATATTTAGTGGAACCAAACAGGCTGCTCATAGACTAAAGATTTTATTTGGATTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGAAATCTTACCCAAGTTCAGCGTCTTGATGCTTTGGAACTCTTCAGGAAACAGCAAGTTGATTATCTTATTGCTACTGATGTGGCTGCTCGGGGCCTGGATATTATTGGTGTTCAAACTGTTATAAACTTTGCCTGTCCTCGTGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGTAGAGAAGGATATGCTGTTACCTTTGTGACTGACAATGACCGTTCTCTTTTAAAAGCCATAGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCAGAATTGTTGCTGAGCAATCCATAAAAAAGTGGTCTGAAATGATTGAAGGAATGGAAGATCAAGTGAATATGATTCTTCGGGAAGAGAGAGAAGAGAGAGCTCTAAGGAAAGCTGAAATGGAAGCAACAAAGGCAGAAAACATGATTGTTCATCAGGAAGAGATTTTTTCACGCCCTAAAAAAACCTGGTTTATAACGGACAAGGAGAAAAAGCTTGTGGCAAAAGCAGCCAAGACATCTCTGGAAAAAGGAAAGACGTCTGGGAACGAAGTCGTAAGTGCACAACATGCCGAAGACCTTAAGATGAAAGAAAAAAGGAAGCGCGAGCGTGAGAAAAATTTGCCGAGGAAGAAGCGTAGGAAATTGGAAGCAGCTAGAGAAATGTTGGAGGAGGAGAAGCAAAATGGCAAAACAGGAGGTGGGGGAGAAAATAAGAAAGACAAATCTGGATTGTCGCTCGTGAAACTTGCATACCGTCGAGCAAAAGCAGTAAAGGCTGTGAACAAGGCGCTTGACTCGGGCAAGATTGTGAAGCAAAACCAGAAAACTAAGAAGTCTTCCCACAGAACTCAATCAAGATCCGAGGAGATGCGAGAGATGTTCCAAAATGATATGAGCGAGCAGAAGCAGAAACGACATGGCAGTGGCGGTGCTGGGATGAAAAAGTCTAAGCATTCCTTCAAAAGCAAGTCAAGGTACAAGCGTAAATAGAAACTCTACTTGGATGTCGATTGGCCTTGTGTTTGCACGGGAACGGTGGCAACGTTAAGTTTGCTATCTGCATTCCTTGCACCAGTTTTGATGGCAGATGGGGTGGTTGTATATTTCTTTCCCTCAAAGTTGATTGCTCTCGGTCGGTTGTGACGTGCGTCGAGAGTCGAAATGCACCATCAACCTGCTGAAGCATAACCTAGTAACACAAATTTGATTTATAGAGATTTGTTGTACCATGAGAAGGAAAACAACTGGAATGAATGGTTATTAGTTTTTCAAATTTTTAGGCTGCCTAGTTCGAATTATTTATTTCATGATTATGCATCATCTCATTGAACTATGATTTTTATTTTGAGATTTCGTGCATGTTGTATGTCGTATGATTATGAATTAGTTCTCTAACATGTTATGAATGAATACATATACTTCGATATTATTC

Coding sequence (CDS)

ATGGAGCTCAACCTGTCGCGCCCACTGATTCGAGCATGTGAGGCTTTGGGATATGCAAAGCCGACGCCAATTCAGGCGGCTTGCATACCGTTGGCATTGACTGGACGTGATATATGTGGAAGTGCAATTACTGGTTCTGGAAAGACTGCAGCTTTTTCGCTACCTACTTTGGAGAGGTTACTCTATCGGCCCAAACGTGATCGTGCGATAAGAGTTTTAGTCCTAACTCCAGCTAGAGAATTGGCAATCCAAGTTCACAGTATGATAGAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATCGTTGGTGGGCTTTCAAGAAAGGAGCAAGAGGCTGCCTTAAGATCGATGCCTGATGTGGTTGTGGCCACTCCAGGACGCATGATCGATCATCTACGCAATTCCATGTCCGTAGACTTGGACGATTTAGCAGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCCGAAATTCGTGAATTGGTTCGTCTTTGCCCAAAAAGGAGGCAGACAATGTTGTTTTCTGCTACCATGACAGAAGAAATTGATGAGCTTATCAAGCTTTCCTTGACTAAACCATTGCGCCTCTCAGCTGACCCAGCTACCAAGAGGCCAAAAACATTGACAGAAGAGGTGGTCAGGTTACGTAGAATGCGTGAAGTAAATCAGGAAGCTGTCCTCCTTGCTCTGTGCTCAAAGACATTTACTTCTAAAGCTATTATATTTAGTGGAACCAAACAGGCTGCTCATAGACTAAAGATTTTATTTGGATTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGAAATCTTACCCAAGTTCAGCGTCTTGATGCTTTGGAACTCTTCAGGAAACAGCAAGTTGATTATCTTATTGCTACTGATGTGGCTGCTCGGGGCCTGGATATTATTGGTGTTCAAACTGTTATAAACTTTGCCTGTCCTCGTGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGTAGAGAAGGATATGCTGTTACCTTTGTGACTGACAATGACCGTTCTCTTTTAAAAGCCATAGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCAGAATTGTTGCTGAGCAATCCATAAAAAAGTGGTCTGAAATGATTGAAGGAATGGAAGATCAAGTGAATATGATTCTTCGGGAAGAGAGAGAAGAGAGAGCTCTAAGGAAAGCTGAAATGGAAGCAACAAAGGCAGAAAACATGATTGTTCATCAGGAAGAGATTTTTTCACGCCCTAAAAAAACCTGGTTTATAACGGACAAGGAGAAAAAGCTTGTGGCAAAAGCAGCCAAGACATCTCTGGAAAAAGGAAAGACGTCTGGGAACGAAGTCGTAAGTGCACAACATGCCGAAGACCTTAAGATGAAAGAAAAAAGGAAGCGCGAGCGTGAGAAAAATTTGCCGAGGAAGAAGCGTAGGAAATTGGAAGCAGCTAGAGAAATGTTGGAGGAGGAGAAGCAAAATGGCAAAACAGGAGGTGGGGGAGAAAATAAGAAAGACAAATCTGGATTGTCGCTCGTGAAACTTGCATACCGTCGAGCAAAAGCAGTAAAGGCTGTGAACAAGGCGCTTGACTCGGGCAAGATTGTGAAGCAAAACCAGAAAACTAAGAAGTCTTCCCACAGAACTCAATCAAGATCCGAGGAGATGCGAGAGATGTTCCAAAATGATATGAGCGAGCAGAAGCAGAAACGACATGGCAGTGGCGGTGCTGGGATGAAAAAGTCTAAGCATTCCTTCAAAAGCAAGTCAAGGTACAAGCGTAAATAG

Protein sequence

MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQEEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALDSGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSRYKRK
BLAST of Cp4.1LG06g09390 vs. Swiss-Prot
Match: RH28_ARATH (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 2.5e-237
Identity = 456/622 (73.31%), Postives = 525/622 (84.41%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACE LGY KPTPIQAACIPLALTGRD+C SAITGSGKTAAF+LPTLERL
Sbjct: 170 MELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERL 229

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  A RVL+LTP RELA+Q+HSMI+ LAQFTDI+C LIVGGLS +EQE  LRSMP
Sbjct: 230 LFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMP 289

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL+ GF+ EI ELVRLCPKRRQTML
Sbjct: 290 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+ EL+KLSL KPLRLSADP+ +RP  LTEEVVR+RR RE NQEAVLL+LC++
Sbjct: 350 FSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTR 409

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF SK IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQ QRLD+LELFRKQ+VD+LIAT
Sbjct: 410 TFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIAT 469

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPR++ SYVHRVGRTARAGREGYAVTFVTD+DRSLLK IAK
Sbjct: 470 DVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAK 529

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           + GSKLKSR++ EQSI KWS++I+ MEDQ + ++  ER+ERALRKAEME  KAENM+ H+
Sbjct: 530 KVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHR 589

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EI++RPK+TWF+T+KEKKLVA+A K S   G  +G E+VSA  AEDLKMKEKRKREREK
Sbjct: 590 DEIYARPKRTWFMTEKEKKLVAQAEKDSA--GNPAGGELVSADRAEDLKMKEKRKREREK 649

Query: 481 NLPRKKRRKLEAAREML-------EEEKQNGKTGGG---GENKK----DKSGLSLVKLAY 540
           NLPRKKRRKLEAAREML       EEE + G    G   G++KK    DK GL+L  L Y
Sbjct: 650 NLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGY 709

Query: 541 RRAKAVKAVNKALDSGKI--VKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSG 600
            RAKAVKA  +A+DSGK+   K ++K  +S  R Q R EEM+++F++DM E+KQ R G+ 
Sbjct: 710 MRAKAVKAKQRAIDSGKMERPKPDKKQSRSKPRNQPRGEEMKDLFKSDMGEKKQGRGGAA 769

Query: 601 GAG--MKKSKHSFKSKSRYKRK 605
            A     KSK+SFKSK+RYKR+
Sbjct: 770 AAAKPRTKSKNSFKSKARYKRR 789

BLAST of Cp4.1LG06g09390 vs. Swiss-Prot
Match: RH28_ORYSJ (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2)

HSP 1 Score: 817.8 bits (2111), Expect = 8.0e-236
Identity = 449/608 (73.85%), Postives = 524/608 (86.18%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           +ELNLSRPL+RACEALGY KPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLP LERL
Sbjct: 197 LELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERL 256

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  AIRVL+LTP RELA QVHSMIEKLAQFTDIRCCLIVGGLS K QE ALRSMP
Sbjct: 257 LFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMP 316

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGR+IDHLRNS+SV L+DLA+LILDEADRLLELGFSAEI+EL+R+CP+RRQTML
Sbjct: 317 DIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTML 376

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEI+EL+ LSL KP+RL ADP+ KRP TLTEEVVR+RR RE NQEAVLLALC K
Sbjct: 377 FSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRAREANQEAVLLALCLK 436

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF  K IIFSGTK +AHRLKI+FGL+G KAAELHGNLTQ QRL+ALELF+KQ+VD+LIAT
Sbjct: 437 TFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALELFKKQEVDFLIAT 496

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARG+DI+GV+TVINF+CPRD  +Y+HRVGRTARAGREGYAVTFVTD+DRSLLKAIAK
Sbjct: 497 DVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAK 556

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           +AGS+LKSRIVAE+ + + +++IE +EDQ++ I++EEREER LRKAEMEATKAENMI H+
Sbjct: 557 KAGSQLKSRIVAEKPVAECAKLIEELEDQISTIIQEEREERILRKAEMEATKAENMIAHK 616

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EI+SRPK+TWF T+KEKKL+AKAAK S  +GK S + V+SAQ AEDL++KEK++REREK
Sbjct: 617 DEIYSRPKRTWFATEKEKKLLAKAAKESTSQGK-SNSGVISAQQAEDLRLKEKKRREREK 676

Query: 481 NLPRKKRRKLEAAREMLE---EEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNK 540
           NLPRKKRR+LEA REMLE   E+++  K   GG  KK+K G SLV +AYRRAK++KA  K
Sbjct: 677 NLPRKKRRRLEAEREMLEDESEDEEEAKESKGG--KKEKKGQSLVDVAYRRAKSMKASGK 736

Query: 541 ALDSGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRH-GSGGAGMKKSKHSFK 600
                   K ++K K+ S +  +R EEM+E+FQNDMSE KQ R         KKSK+SFK
Sbjct: 737 RGAGTGKGKNDKKAKQHSGKGPTRQEEMQELFQNDMSEWKQGRSLKKNNVMRKKSKNSFK 796

Query: 601 SKSRYKRK 605
           SKSRY R+
Sbjct: 797 SKSRYNRR 801

BLAST of Cp4.1LG06g09390 vs. Swiss-Prot
Match: DRS1_MAGO7 (ATP-dependent RNA helicase DRS1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DRS1 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.2e-125
Identity = 255/524 (48.66%), Postives = 347/524 (66.22%), Query Frame = 1

Query: 3   LNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLY 62
           ++LSRP++R   ++G+AKPTPIQ+  IP+AL G+D+ G A+TGSGKTAAF +P LERLLY
Sbjct: 260 MSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLY 319

Query: 63  RPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDV 122
           RPK+    RV++L P RELAIQ H++  KLA  TDI+ CL VGGLS K QE+ LR  PDV
Sbjct: 320 RPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDV 379

Query: 123 VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLFS 182
           ++ATPGR IDH+RNS S  +D + +L+LDEADR+LE GF+ E+ E++   PK RQTMLFS
Sbjct: 380 IIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFS 439

Query: 183 ATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTF 242
           ATMT  +D LI++ L KP+RL  D   K   TLT+E VRLR  RE  +   L+ LC   +
Sbjct: 440 ATMTSSVDNLIRVGLNKPVRLMVDSQKKTVVTLTQEFVRLRPGREEKRMGYLVYLCKNLY 499

Query: 243 TSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIATDV 302
           T + IIF   K+ AH  +I+FGL G   AELHG+++Q+QR+ ++E FR  +V +L+ATD+
Sbjct: 500 TERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDL 559

Query: 303 AARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA 362
           A+RGLDI GV TVIN+  P+ L  YVHRVGRTARAGR G A+T   + DR ++KA  K  
Sbjct: 560 ASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAG 619

Query: 363 ---GSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVH 422
              G+K+ SRI+       W   I+ +ED+V  ++REE+EE+ L +A+ME  K ENMI +
Sbjct: 620 KAQGAKISSRIIDAADADSWQAKIDELEDEVEAVMREEKEEKVLAQADMEMRKGENMIRY 679

Query: 423 QEEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKRERE 482
           +++I +RPK+TWF T+K+KK   +A + +L       N V  A           +K+   
Sbjct: 680 EDDIKARPKRTWFETEKDKKAAREAGRAAL-------NGVREA----------LKKKHGG 739

Query: 483 KNLPRKKRRKLEAAREMLEE---EKQNGKTGGGG---ENKKDKS 518
           KNL  K ++KL+A  E  E    +K   +  G G     KKDKS
Sbjct: 740 KNLSNKDKKKLDAMAEAKEARVWKKGAAERAGKGAVLNFKKDKS 766

BLAST of Cp4.1LG06g09390 vs. Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=drh-11 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 2.0e-125
Identity = 257/545 (47.16%), Postives = 355/545 (65.14%), Query Frame = 1

Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           E++LSRP++R   ++G+ KPTPIQA  IP++L G+D+ G A+TGSGKTAAF +P LERLL
Sbjct: 297 EMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLL 356

Query: 62  YRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPD 121
           YRPK+    RV++LTP RELAIQ H++  KLA  TDI+ CL VGGLS K QEA LR  PD
Sbjct: 357 YRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPD 416

Query: 122 VVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLF 181
           VV+ATPGR IDH+RNS S  +D + +L+LDEADR+LE GF+ E+ E++   PK RQTMLF
Sbjct: 417 VVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLF 476

Query: 182 SATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKT 241
           SATMT  +D LI+  L KP+R+ AD   K   TL +E VRLR  RE  +E  LL +C   
Sbjct: 477 SATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRESKREGYLLHICKTI 536

Query: 242 FTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIATD 301
           +T + IIF   K+ AH+++I+FGL G   AELHG++ Q QR+ ++E FR  +V++L+ATD
Sbjct: 537 YTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDGKVNFLLATD 596

Query: 302 VAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKR 361
           +A+RGLDI GV TVIN+  P+    YVHRVGRTARAGR G A+T   + DR ++KA  K 
Sbjct: 597 LASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKA 656

Query: 362 A---GSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIV 421
               G+K+ SRI+      KW   I+ +ED++  I++EE+EE+ L+  EM+  K ENMI 
Sbjct: 657 GKSQGAKISSRIIDPADADKWQAEIDELEDEIEEIMQEEKEEKQLQNMEMQVKKGENMIK 716

Query: 422 HQEEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKRER 481
           +++EI SRPK+TWF T ++KK           K K +G        AE   +++K K + 
Sbjct: 717 YEDEISSRPKRTWFETQEDKK-----------KAKAAG-------RAELNGVRDKLKSKN 776

Query: 482 EKNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKA 541
           E  L  K R+KL+    M E +++     G  E     + L+L K+  +  ++     K 
Sbjct: 777 EGKLSNKDRKKLDT---MQERKQERTYKKGSAERAGKGAVLNLKKVVKKVGRSAGPKKKG 820

Query: 542 LDSGK 544
            ++GK
Sbjct: 837 GNAGK 820

BLAST of Cp4.1LG06g09390 vs. Swiss-Prot
Match: DDX27_DICDI (Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum GN=ddx27 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.2e-124
Identity = 276/609 (45.32%), Postives = 390/609 (64.04%), Query Frame = 1

Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           EL+LSRPL++A + LG+++PTPIQA  IPLAL G+DI  SA TGSGKTAAF LP LERLL
Sbjct: 194 ELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLL 253

Query: 62  YRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPD 121
           +R    RAIRVL+L P RELA+Q  S++E LAQF++I  CLIVGGLS K QE  LR  PD
Sbjct: 254 FRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPD 313

Query: 122 VVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLF 181
           VV+ATPGR+IDHL N+  + LDDL +LILDEADRLL++GF  EI ++V  CP  RQTMLF
Sbjct: 314 VVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLF 373

Query: 182 SATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKT 241
           SAT+ +E+  L KLSL +P+R+  D   +   TL +E V+++     ++ A+LL+LC++ 
Sbjct: 374 SATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQHLSDRPAILLSLCTRV 433

Query: 242 FT-SKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 301
           F     IIF  +K+  HRL+I+FGL+  KAAELHGNL+Q QR D+L+ FR  QV+YL+A+
Sbjct: 434 FNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLAS 493

Query: 302 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 361
           DVA+RGLDIIGV+TVIN+  P ++ +Y+HRVGRTARAG +G + +F+TDNDR LLK I  
Sbjct: 494 DVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIVT 553

Query: 362 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 421
           +A +K KSR V++ ++  W   IE + + +  I+REE +E  LRKAE    KAE +I + 
Sbjct: 554 KARNKAKSRSVSQDNVNFWRNRIEELTEDIKSIVREEMKEADLRKAEKTLDKAEKIISNA 613

Query: 422 EEIFSRPKKTWFITDKEK---KLVAKAAKTSLEKGK--TSGNEVVSAQHAEDLKMKEKRK 481
           +     P K W+ T +E+   K + K     +  GK   +  +V    +   +K K K+K
Sbjct: 614 DANVETP-KVWYKTKQEEDKSKELWKIENNIVNPGKKLKAPIDVTGVNNVPSIK-KLKQK 673

Query: 482 REREKNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAV 541
           ++    L RK+RR  +  +E  E E+Q  +   GG++  D                    
Sbjct: 674 KDPYYGLSRKQRRHRQ-FKEEFEREQQEERKRKGGDDGDD-------------------- 733

Query: 542 NKALDSGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSF 601
           N+ +DSGK+ +++Q+ +KSS +   R E +R  +    +   Q++        KK+K   
Sbjct: 734 NEEIDSGKMFERSQRAQKSSGKETKRIESLRRNYMAGGALTDQEKQRVDNKKSKKNKRMI 779

Query: 602 KSKSRYKRK 605
            +K   K++
Sbjct: 794 VNKKEKKQR 779

BLAST of Cp4.1LG06g09390 vs. TrEMBL
Match: A0A0A0LIW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855940 PE=3 SV=1)

HSP 1 Score: 1032.3 bits (2668), Expect = 2.3e-298
Identity = 566/605 (93.55%), Postives = 582/605 (96.20%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 138 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 197

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 198 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 257

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 258 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 317

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE++ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLL+LCSK
Sbjct: 318 FSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLSLCSK 377

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK I+FSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVD+LIAT
Sbjct: 378 TFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDFLIAT 437

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGV+TVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 438 DVAARGLDIIGVETVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 497

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSE+IE MEDQV  ILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 498 RAGSKLKSRIVAEQSIKKWSEIIEQMEDQVTAILREEREERALRKAEMEATKAENMIVHQ 557

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITD+EK+LVAKAAK SLEKGKTSGNE VSAQ AE+ KMKEKRKREREK
Sbjct: 558 EEIFSRPKKTWFITDREKRLVAKAAKASLEKGKTSGNEAVSAQQAEEEKMKEKRKREREK 617

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           +LPRKKRRKLEAAREMLEEEKQN KTGG         GLSL+KLAYRRAKAVKAV +A+D
Sbjct: 618 DLPRKKRRKLEAAREMLEEEKQNDKTGG---------GLSLMKLAYRRAKAVKAVKRAVD 677

Query: 541 SGKIV-KQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           SGKIV KQNQKTKKSSHRTQSRSEEMREMFQ+DMSEQKQKR GSGG G KKSKHSFKSKS
Sbjct: 678 SGKIVKKQNQKTKKSSHRTQSRSEEMREMFQSDMSEQKQKRRGSGGFGKKKSKHSFKSKS 733

Query: 601 RYKRK 605
           RYKRK
Sbjct: 738 RYKRK 733

BLAST of Cp4.1LG06g09390 vs. TrEMBL
Match: B9H4Z8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26280g PE=3 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 4.5e-270
Identity = 511/607 (84.18%), Postives = 562/607 (92.59%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACEALGY KPTPIQAACIPLALTGRDICGSAITGSGKTAAF+LPTLERL
Sbjct: 139 MELNLSRPLLRACEALGYTKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERL 198

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  AIRVL+LTP RELA+QVHSMIEK+AQFTDIRCCL+VGGLS K QEA+LRSMP
Sbjct: 199 LFRPKRILAIRVLILTPTRELAVQVHSMIEKIAQFTDIRCCLVVGGLSTKVQEASLRSMP 258

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGF+AEI ELVRLCPKRRQTML
Sbjct: 259 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFNAEIHELVRLCPKRRQTML 318

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+D LIKLSLTKPLRLSADP+ KRP  LTEEV+RLRRMREVNQEAVLLALCSK
Sbjct: 319 FSATMTEEVDMLIKLSLTKPLRLSADPSAKRPAALTEEVLRLRRMREVNQEAVLLALCSK 378

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQ QRLDALELFRKQ+VD+LIAT
Sbjct: 379 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQAQRLDALELFRKQEVDFLIAT 438

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPRDLTSY+HRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 439 DVAARGLDIIGVQTVINYACPRDLTSYIHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 498

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKL+SRIVAEQSI KWS+MIE ME+QV  +L++EREERA+RKAEMEATKAENMI H+
Sbjct: 499 RAGSKLRSRIVAEQSIIKWSQMIENMENQVADVLQQEREERAIRKAEMEATKAENMIAHK 558

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAK-TSLEKGKTSGNEVVSAQHAEDLKMKEKRKRERE 480
           +EIFSRPK+TWF+T++EK L AKAAK +S+EK K SGNEV+SAQ AEDLKMKEKRKRERE
Sbjct: 559 DEIFSRPKRTWFVTEREKMLAAKAAKQSSVEKEKGSGNEVMSAQQAEDLKMKEKRKRERE 618

Query: 481 KNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKAL 540
           KNLPRKKRRKL+AAREMLE+E    K+ G G+NKK+K+GLSLV L YRRAKA KAV KA+
Sbjct: 619 KNLPRKKRRKLQAAREMLEDEDLTEKSEGSGKNKKEKTGLSLVDLGYRRAKAAKAVKKAM 678

Query: 541 DSGKIV--KQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKS 600
           D+GK V  K ++K+K+   RTQSR+EEM+E+FQ+DMSE+KQKR  S G G KKSK+SFKS
Sbjct: 679 DAGKFVQKKGSKKSKQPPERTQSRTEEMQELFQSDMSEKKQKRR-SSGTGNKKSKNSFKS 738

Query: 601 KSRYKRK 605
           KSRYKRK
Sbjct: 739 KSRYKRK 744

BLAST of Cp4.1LG06g09390 vs. TrEMBL
Match: A0A067HB44_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004808mg PE=3 SV=1)

HSP 1 Score: 937.9 bits (2423), Expect = 5.9e-270
Identity = 511/605 (84.46%), Postives = 557/605 (92.07%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACEALGY+KPTPIQAACIPLALTGRDICGSAITGSGKTAAF+LPTLERL
Sbjct: 1   MELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERL 60

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKR  AIRVL+LTP RELA+QVHSMIEK+AQFTDIRCCL+VGGLS K QE ALRSMP
Sbjct: 61  LYRPKRIPAIRVLILTPTRELAVQVHSMIEKIAQFTDIRCCLVVGGLSTKMQETALRSMP 120

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI ELVRLCPKRRQTML
Sbjct: 121 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIHELVRLCPKRRQTML 180

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSAT+TE++DELIKLSLTKPLRLSADP+ KRP TLTEEVVR+RRMREVNQEAVLL+LCSK
Sbjct: 181 FSATLTEDVDELIKLSLTKPLRLSADPSAKRPSTLTEEVVRIRRMREVNQEAVLLSLCSK 240

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK IIFSGTKQAAHRLKILFGLA  KAAELHGNLTQ QRL+ALELFRKQ VD+LIAT
Sbjct: 241 TFTSKVIIFSGTKQAAHRLKILFGLAALKAAELHGNLTQAQRLEALELFRKQHVDFLIAT 300

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 301 DVAARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSI KWS++IE MEDQV  IL+EEREER LRKAEMEATKAENMI H+
Sbjct: 361 RAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQEEREERILRKAEMEATKAENMIAHK 420

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIF+RPK+TWF+T+KEKKL  KA K S+EKGK SGNEV SAQ AEDLK+KEKRKREREK
Sbjct: 421 EEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGNEVTSAQQAEDLKIKEKRKREREK 480

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRK+RRKLEAAREMLE+E Q  K  G G++KK+K+G+S+V LAYRRAKAVKA  KALD
Sbjct: 481 NLPRKERRKLEAAREMLEDEDQVDKLQGSGKDKKEKAGISMVDLAYRRAKAVKAKQKALD 540

Query: 541 SGKIVKQN-QKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           +GKIVK N +K+K SS  + SR++EMRE+F +DMSE+KQKR  +GG G KK KHSFKSKS
Sbjct: 541 AGKIVKSNGKKSKHSSQESNSRAKEMRELFHSDMSEKKQKR--TGGIG-KKPKHSFKSKS 600

Query: 601 RYKRK 605
           RYKR+
Sbjct: 601 RYKRR 602

BLAST of Cp4.1LG06g09390 vs. TrEMBL
Match: A0A067HAQ5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004808mg PE=3 SV=1)

HSP 1 Score: 937.9 bits (2423), Expect = 5.9e-270
Identity = 511/605 (84.46%), Postives = 557/605 (92.07%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACEALGY+KPTPIQAACIPLALTGRDICGSAITGSGKTAAF+LPTLERL
Sbjct: 128 MELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERL 187

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKR  AIRVL+LTP RELA+QVHSMIEK+AQFTDIRCCL+VGGLS K QE ALRSMP
Sbjct: 188 LYRPKRIPAIRVLILTPTRELAVQVHSMIEKIAQFTDIRCCLVVGGLSTKMQETALRSMP 247

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI ELVRLCPKRRQTML
Sbjct: 248 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIHELVRLCPKRRQTML 307

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSAT+TE++DELIKLSLTKPLRLSADP+ KRP TLTEEVVR+RRMREVNQEAVLL+LCSK
Sbjct: 308 FSATLTEDVDELIKLSLTKPLRLSADPSAKRPSTLTEEVVRIRRMREVNQEAVLLSLCSK 367

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK IIFSGTKQAAHRLKILFGLA  KAAELHGNLTQ QRL+ALELFRKQ VD+LIAT
Sbjct: 368 TFTSKVIIFSGTKQAAHRLKILFGLAALKAAELHGNLTQAQRLEALELFRKQHVDFLIAT 427

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 428 DVAARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 487

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSI KWS++IE MEDQV  IL+EEREER LRKAEMEATKAENMI H+
Sbjct: 488 RAGSKLKSRIVAEQSITKWSKIIEQMEDQVAAILQEEREERILRKAEMEATKAENMIAHK 547

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIF+RPK+TWF+T+KEKKL  KA K S+EKGK SGNEV SAQ AEDLK+KEKRKREREK
Sbjct: 548 EEIFARPKRTWFVTEKEKKLAVKADKASIEKGKGSGNEVTSAQQAEDLKIKEKRKREREK 607

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRK+RRKLEAAREMLE+E Q  K  G G++KK+K+G+S+V LAYRRAKAVKA  KALD
Sbjct: 608 NLPRKERRKLEAAREMLEDEDQVDKLQGSGKDKKEKAGISMVDLAYRRAKAVKAKQKALD 667

Query: 541 SGKIVKQN-QKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           +GKIVK N +K+K SS  + SR++EMRE+F +DMSE+KQKR  +GG G KK KHSFKSKS
Sbjct: 668 AGKIVKSNGKKSKHSSQESNSRAKEMRELFHSDMSEKKQKR--TGGIG-KKPKHSFKSKS 727

Query: 601 RYKRK 605
           RYKR+
Sbjct: 728 RYKRR 729

BLAST of Cp4.1LG06g09390 vs. TrEMBL
Match: A0A0R0IVA1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G313100 PE=3 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 7.7e-270
Identity = 505/605 (83.47%), Postives = 560/605 (92.56%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           ++LNLSRPL+RACEALGY+KPTPIQAACIPLAL+GRDICGSAITGSGKTAAF+LPTLERL
Sbjct: 155 LQLNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERL 214

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR RAIRVL+LTP RELA+QVHSMIEKLAQFTDIRCCL+VGGLS K QEAALR+MP
Sbjct: 215 LFRPKRMRAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEAALRTMP 274

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRN+MSVDLDDLAVLILDEADRLLELGFSAEI+ELVRLCPK+RQTML
Sbjct: 275 DIVVATPGRMIDHLRNAMSVDLDDLAVLILDEADRLLELGFSAEIQELVRLCPKKRQTML 334

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+DELIKLSL+KPLRLSADP+TKRP TLTEEVVR+RRMREVNQEAVLLA+CSK
Sbjct: 335 FSATMTEEVDELIKLSLSKPLRLSADPSTKRPATLTEEVVRIRRMREVNQEAVLLAMCSK 394

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK IIFSGTKQAAHRLKI+FGLAG KAAELHGNLTQ QRL+ALE FRKQQVD+L+AT
Sbjct: 395 TFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVAT 454

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 455 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 514

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSI KWS +IE MEDQ++ +L EEREER LRKAEMEATKAENMI H+
Sbjct: 515 RAGSKLKSRIVAEQSIHKWSHIIEQMEDQISEVLHEEREERVLRKAEMEATKAENMIAHR 574

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPK+TWF+T+KEKKL AKA+K S++K K+SG EV+SA+ AEDL+MKEKRKREREK
Sbjct: 575 EEIFSRPKRTWFVTEKEKKLAAKASKASMDKCKSSGKEVISAEQAEDLRMKEKRKREREK 634

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           +LPRKKRRKLEAAREMLEEE+ + +    G NKK+K G+SLV LAYRRAKAVKAV KALD
Sbjct: 635 HLPRKKRRKLEAAREMLEEEEDDKQVETKGGNKKEKGGMSLVDLAYRRAKAVKAVKKALD 694

Query: 541 SGKIVKQN-QKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           SGKIV++N +K+  +S +T SR+EEMRE+FQ DM ++K KR G GG   KKSK SFKSKS
Sbjct: 695 SGKIVEKNKKKSNNNSRKTPSRTEEMRELFQTDMKDKKSKRRGVGGG--KKSKSSFKSKS 754

Query: 601 RYKRK 605
           RYKRK
Sbjct: 755 RYKRK 757

BLAST of Cp4.1LG06g09390 vs. TAIR10
Match: AT4G16630.1 (AT4G16630.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 822.8 bits (2124), Expect = 1.4e-238
Identity = 456/622 (73.31%), Postives = 525/622 (84.41%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACE LGY KPTPIQAACIPLALTGRD+C SAITGSGKTAAF+LPTLERL
Sbjct: 170 MELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERL 229

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  A RVL+LTP RELA+Q+HSMI+ LAQFTDI+C LIVGGLS +EQE  LRSMP
Sbjct: 230 LFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMP 289

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL+ GF+ EI ELVRLCPKRRQTML
Sbjct: 290 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+ EL+KLSL KPLRLSADP+ +RP  LTEEVVR+RR RE NQEAVLL+LC++
Sbjct: 350 FSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTR 409

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF SK IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQ QRLD+LELFRKQ+VD+LIAT
Sbjct: 410 TFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIAT 469

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPR++ SYVHRVGRTARAGREGYAVTFVTD+DRSLLK IAK
Sbjct: 470 DVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAK 529

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           + GSKLKSR++ EQSI KWS++I+ MEDQ + ++  ER+ERALRKAEME  KAENM+ H+
Sbjct: 530 KVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHR 589

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EI++RPK+TWF+T+KEKKLVA+A K S   G  +G E+VSA  AEDLKMKEKRKREREK
Sbjct: 590 DEIYARPKRTWFMTEKEKKLVAQAEKDSA--GNPAGGELVSADRAEDLKMKEKRKREREK 649

Query: 481 NLPRKKRRKLEAAREML-------EEEKQNGKTGGG---GENKK----DKSGLSLVKLAY 540
           NLPRKKRRKLEAAREML       EEE + G    G   G++KK    DK GL+L  L Y
Sbjct: 650 NLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGY 709

Query: 541 RRAKAVKAVNKALDSGKI--VKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSG 600
            RAKAVKA  +A+DSGK+   K ++K  +S  R Q R EEM+++F++DM E+KQ R G+ 
Sbjct: 710 MRAKAVKAKQRAIDSGKMERPKPDKKQSRSKPRNQPRGEEMKDLFKSDMGEKKQGRGGAA 769

Query: 601 GAG--MKKSKHSFKSKSRYKRK 605
            A     KSK+SFKSK+RYKR+
Sbjct: 770 AAAKPRTKSKNSFKSKARYKRR 789

BLAST of Cp4.1LG06g09390 vs. TAIR10
Match: AT5G60990.1 (AT5G60990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-65
Identity = 150/404 (37.13%), Postives = 221/404 (54.70%), Query Frame = 1

Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           EL +   L++ACE LG+  P+ IQA  +P AL G+D+ G A TGSGKT AF++P L+ LL
Sbjct: 13  ELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALL 72

Query: 62  Y-----RPKRDR----AIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQ 121
                  PK+ R    A    VL+P RELAIQ+    E L     +RC ++VGG+ R +Q
Sbjct: 73  EYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQ 132

Query: 122 EAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLC 181
             AL   P V+VATPGR+ DH+ ++    L  L  L+LDEADRLL   F   + +++   
Sbjct: 133 TIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEI 192

Query: 182 PKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEA 241
           P  R+T LFSATMT+++ +L +  L  P+++ A        TL ++    R +    ++ 
Sbjct: 193 PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQ---YRFVAAKYKDC 252

Query: 242 VLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQ 301
            L+ + S+   S ++IF+ T      L ++    GF+A  + G +TQ +RL AL  F+  
Sbjct: 253 YLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAG 312

Query: 302 QVDYLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDR 361
           + + L+ TDVA+RGLDI  V  VIN+  P +   Y+HRVGRTARAGR G  ++ V   + 
Sbjct: 313 ECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYEL 372

Query: 362 SLLKAIAKRAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILRE 397
                I K  G KL      E  +    E +   +    M ++E
Sbjct: 373 EWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKE 413

BLAST of Cp4.1LG06g09390 vs. TAIR10
Match: AT1G16280.1 (AT1G16280.1 RNA helicase 36)

HSP 1 Score: 245.7 bits (626), Expect = 7.1e-65
Identity = 151/368 (41.03%), Postives = 209/368 (56.79%), Query Frame = 1

Query: 3   LNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLY 62
           L L+   +  C+ LG  KPTP+Q  C+P  L GRD+ G A TGSGKTAAF+LP L RL  
Sbjct: 63  LGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAE 122

Query: 63  RPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDV 122
            P     +  LV+TP RELA Q+    + L    ++RC +IVGG+    Q  +L S P +
Sbjct: 123 DPY---GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHI 182

Query: 123 VVATPGRMIDHLRNSMSVD--LDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 182
           V+ TPGR+   L N+  V         L+LDEADR+L++GF  E+R + +  PK RQT+L
Sbjct: 183 VITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLL 242

Query: 183 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVV-RLRRMREVNQEAVLLALCS 242
           FSATMT  +  L++ S  K     A    K   TLT++ +   +  +E+    +L  +  
Sbjct: 243 FSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMED 302

Query: 243 KTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIA 302
           K   S A+IF  T +   RL ++      +   +H   +Q  RL AL  F+  +V  L+A
Sbjct: 303 KGIRS-AMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLA 362

Query: 303 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIA 362
           TDVA+RGLDI  V  VIN+  PRD   YVHRVGRTARAGR G AV+ +T+ D  L+  I 
Sbjct: 363 TDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIE 422

Query: 363 KRAGSKLK 368
           +  G K++
Sbjct: 423 EEVGKKME 426

BLAST of Cp4.1LG06g09390 vs. TAIR10
Match: AT2G47330.1 (AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 214.5 bits (545), Expect = 1.8e-55
Identity = 134/378 (35.45%), Postives = 213/378 (56.35%), Query Frame = 1

Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           +   S  ++ A +   Y KPT IQ   +P+ L+GRD+ G A TGSGKTAAF LP +  ++
Sbjct: 232 DCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIM 291

Query: 62  YRPK--RDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSM 121
            +P+  RD     ++  P RELA Q+    +K ++   +R   + GG+S+ EQ   L++ 
Sbjct: 292 DQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAG 351

Query: 122 PDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTM 181
            ++VVATPGR+ID L+   ++ +   + L+LDEADR+ +LGF  ++R +V      RQT+
Sbjct: 352 CEIVVATPGRLIDMLKMK-ALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTL 411

Query: 182 LFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCS 241
           LFSATM  ++++L +  L+ P+R++        + +T+ VV +          +L  L  
Sbjct: 412 LFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQ-VVNVIPSDAEKLPWLLEKLPG 471

Query: 242 KTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIA 301
                  ++F+  K     ++    L  FK A LHG+  Q  R++ L+ F+      LIA
Sbjct: 472 MIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIA 531

Query: 302 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAG-REGYAVTFVTDNDRSLLKAI 361
           TDVAARGLDI  ++TV+N+   +D+  +VHR+GRT RAG R+G A T VT  +       
Sbjct: 532 TDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQRE------- 591

Query: 362 AKRAGSKLKSRIVAEQSI 377
           A+ AG  + S + A Q++
Sbjct: 592 ARFAGELVNSLVAAGQNV 600

BLAST of Cp4.1LG06g09390 vs. TAIR10
Match: AT5G63120.2 (AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 208.8 bits (530), Expect = 9.6e-54
Identity = 129/361 (35.73%), Postives = 195/361 (54.02%), Query Frame = 1

Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           + N    ++ A   LG+ +PTPIQA   P+AL GRD+ G A TGSGKT A+ LP L  + 
Sbjct: 169 DANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVS 228

Query: 62  YRPK--RDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSM 121
            +P+  +D    VL+L P RELA+Q+     K    + +R   I GG  +  Q   LR  
Sbjct: 229 AQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRG 288

Query: 122 PDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTM 181
            ++V+ATPGR+ID L      +L  +  L+LDEADR+L++GF  +IR++V      RQT+
Sbjct: 289 VEIVIATPGRLIDMLE-CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 348

Query: 182 LFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCS 241
           L+SAT   E++ L +  L  P +        +      +V+ +    E     +L  L  
Sbjct: 349 LWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPE-KYNRLLTLLKQ 408

Query: 242 KTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIA 301
               SK +IF  TK+   ++     + G+ A  +HG+ TQ +R   L  F+  +   + A
Sbjct: 409 LMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTA 468

Query: 302 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIA 361
           TDVAARGLD+  ++ V+N+  P  L  Y+HR+GRT RAG +G A TF T ++    + + 
Sbjct: 469 TDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELV 527

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: gi|449460106|ref|XP_004147787.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X1 [Cucumis sativus])

HSP 1 Score: 1032.3 bits (2668), Expect = 3.3e-298
Identity = 566/605 (93.55%), Postives = 582/605 (96.20%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 138 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 197

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 198 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 257

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 258 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 317

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE++ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLL+LCSK
Sbjct: 318 FSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLSLCSK 377

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK I+FSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVD+LIAT
Sbjct: 378 TFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDFLIAT 437

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGV+TVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 438 DVAARGLDIIGVETVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 497

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSE+IE MEDQV  ILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 498 RAGSKLKSRIVAEQSIKKWSEIIEQMEDQVTAILREEREERALRKAEMEATKAENMIVHQ 557

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITD+EK+LVAKAAK SLEKGKTSGNE VSAQ AE+ KMKEKRKREREK
Sbjct: 558 EEIFSRPKKTWFITDREKRLVAKAAKASLEKGKTSGNEAVSAQQAEEEKMKEKRKREREK 617

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           +LPRKKRRKLEAAREMLEEEKQN KTGG         GLSL+KLAYRRAKAVKAV +A+D
Sbjct: 618 DLPRKKRRKLEAAREMLEEEKQNDKTGG---------GLSLMKLAYRRAKAVKAVKRAVD 677

Query: 541 SGKIV-KQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           SGKIV KQNQKTKKSSHRTQSRSEEMREMFQ+DMSEQKQKR GSGG G KKSKHSFKSKS
Sbjct: 678 SGKIVKKQNQKTKKSSHRTQSRSEEMREMFQSDMSEQKQKRRGSGGFGKKKSKHSFKSKS 733

Query: 601 RYKRK 605
           RYKRK
Sbjct: 738 RYKRK 733

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: gi|778686567|ref|XP_011652411.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis sativus])

HSP 1 Score: 1032.3 bits (2668), Expect = 3.3e-298
Identity = 566/605 (93.55%), Postives = 582/605 (96.20%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 61  LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE++ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLL+LCSK
Sbjct: 181 FSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLSLCSK 240

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK I+FSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVD+LIAT
Sbjct: 241 TFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDFLIAT 300

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGV+TVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 301 DVAARGLDIIGVETVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSE+IE MEDQV  ILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 361 RAGSKLKSRIVAEQSIKKWSEIIEQMEDQVTAILREEREERALRKAEMEATKAENMIVHQ 420

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITD+EK+LVAKAAK SLEKGKTSGNE VSAQ AE+ KMKEKRKREREK
Sbjct: 421 EEIFSRPKKTWFITDREKRLVAKAAKASLEKGKTSGNEAVSAQQAEEEKMKEKRKREREK 480

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           +LPRKKRRKLEAAREMLEEEKQN KTGG         GLSL+KLAYRRAKAVKAV +A+D
Sbjct: 481 DLPRKKRRKLEAAREMLEEEKQNDKTGG---------GLSLMKLAYRRAKAVKAVKRAVD 540

Query: 541 SGKIV-KQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           SGKIV KQNQKTKKSSHRTQSRSEEMREMFQ+DMSEQKQKR GSGG G KKSKHSFKSKS
Sbjct: 541 SGKIVKKQNQKTKKSSHRTQSRSEEMREMFQSDMSEQKQKRRGSGGFGKKKSKHSFKSKS 596

Query: 601 RYKRK 605
           RYKRK
Sbjct: 601 RYKRK 596

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: gi|659133141|ref|XP_008466577.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Cucumis melo])

HSP 1 Score: 1031.6 bits (2666), Expect = 5.6e-298
Identity = 565/605 (93.39%), Postives = 582/605 (96.20%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 138 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 197

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 198 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 257

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 258 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 317

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE++ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLL+LCSK
Sbjct: 318 FSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLSLCSK 377

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK I+FSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVD+LIAT
Sbjct: 378 TFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDFLIAT 437

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 438 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 497

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSE+IE MEDQV  IL+EEREERALRKAEMEATKAENMIVHQ
Sbjct: 498 RAGSKLKSRIVAEQSIKKWSEIIEQMEDQVTAILQEEREERALRKAEMEATKAENMIVHQ 557

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITD+EK+LVAKAAK SLEKGKTSGNE +SAQ AE+ KMKEKRKREREK
Sbjct: 558 EEIFSRPKKTWFITDREKRLVAKAAKASLEKGKTSGNEAISAQQAEEEKMKEKRKREREK 617

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           +LPRKKRRKLEAAREMLEEEKQN KTGG         GLSL+KLAYRRAKAVKAV +A+D
Sbjct: 618 DLPRKKRRKLEAAREMLEEEKQNDKTGG---------GLSLMKLAYRRAKAVKAVKRAVD 677

Query: 541 SGKIV-KQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           SGKIV KQNQKTKKSSHRTQSRSEEMREMFQ+DMSEQKQKR GSGG G KKSKHSFKSKS
Sbjct: 678 SGKIVKKQNQKTKKSSHRTQSRSEEMREMFQSDMSEQKQKRRGSGGFGKKKSKHSFKSKS 733

Query: 601 RYKRK 605
           RYKRK
Sbjct: 738 RYKRK 733

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: gi|1009118167|ref|XP_015875716.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Ziziphus jujuba])

HSP 1 Score: 943.0 bits (2436), Expect = 2.6e-271
Identity = 514/605 (84.96%), Postives = 558/605 (92.23%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACEALGY KPTPIQAACIPLA+ GRDICGSAITGSGKTAAF+LPTLERL
Sbjct: 142 MELNLSRPLLRACEALGYTKPTPIQAACIPLAMAGRDICGSAITGSGKTAAFTLPTLERL 201

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  AIRVL+LTP RELA+QVHSMIEKLAQFTDIRCCLIVGGLS K QEAALRSMP
Sbjct: 202 LFRPKRQLAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLIVGGLSTKMQEAALRSMP 261

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNS+SV L+DLAVLILDEADRLLELGFSAEI EL+RLCPKRRQTML
Sbjct: 262 DIVVATPGRMIDHLRNSLSVALEDLAVLILDEADRLLELGFSAEIHELIRLCPKRRQTML 321

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE++EL+KLSL KPLRLSADP+ KRP TLTEEVVR+RRMREVNQEAVLLALCSK
Sbjct: 322 FSATMTEEVNELVKLSLAKPLRLSADPSAKRPATLTEEVVRIRRMREVNQEAVLLALCSK 381

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF+SK IIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFR+Q+VDYLIAT
Sbjct: 382 TFSSKVIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRRQEVDYLIAT 441

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 442 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 501

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSI KWS+ IE MEDQV  IL+EE EERALRKAEME TKAEN+I H+
Sbjct: 502 RAGSKLKSRIVAEQSIIKWSQTIEQMEDQVAAILQEESEERALRKAEMEVTKAENLIAHR 561

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EIFSRPK+TWF+T+KEKKL AKAAK SL K   S  EV+SAQ AEDLKMKEKRKREREK
Sbjct: 562 DEIFSRPKRTWFVTEKEKKLAAKAAKASLGKENNSKTEVISAQQAEDLKMKEKRKREREK 621

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEE Q+GK  GGG+ KK+K+G+SLV LAYRRAKAVKAV KA D
Sbjct: 622 NLPRKKRRKLEAAREMLEEENQSGKLEGGGKQKKEKTGMSLVDLAYRRAKAVKAVKKAAD 681

Query: 541 SGKIVK-QNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           +GKIV+  ++K+  SS RTQSR+EEM+E+FQ+DMSE+KQKR+ SG  G KKSK SFKSKS
Sbjct: 682 AGKIVRTASKKSNHSSKRTQSRTEEMQELFQSDMSERKQKRNSSGTGG-KKSKSSFKSKS 741

Query: 601 RYKRK 605
           RYKR+
Sbjct: 742 RYKRR 745

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: gi|743903430|ref|XP_011045064.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Populus euphratica])

HSP 1 Score: 942.2 bits (2434), Expect = 4.5e-271
Identity = 510/606 (84.16%), Postives = 563/606 (92.90%), Query Frame = 1

Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACEALGY KPTPIQAACIPLALTGRDICGSAITGSGKTAAF+LPTLERL
Sbjct: 171 MELNLSRPLLRACEALGYTKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERL 230

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  AIRVL+LTP RELA+QVHSMIEK+AQFTDIRCCL+VGGLS K QEAALRSMP
Sbjct: 231 LFRPKRILAIRVLILTPTRELAVQVHSMIEKIAQFTDIRCCLVVGGLSTKVQEAALRSMP 290

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGF+AEI ELVRLCPKRRQTML
Sbjct: 291 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFNAEIHELVRLCPKRRQTML 350

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+DELIKLSLTKPLRLSADP+ KRP  LTEEV+RLRRMREVNQEAVLLALCSK
Sbjct: 351 FSATMTEEVDELIKLSLTKPLRLSADPSAKRPAALTEEVLRLRRMREVNQEAVLLALCSK 410

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGL+GFKAAELHGNLTQ QRLDALELFRKQ+VD+LIAT
Sbjct: 411 TFTSKAIIFSGTKQAAHRLKILFGLSGFKAAELHGNLTQAQRLDALELFRKQEVDFLIAT 470

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPRDLTSY+HRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 471 DVAARGLDIIGVQTVINYACPRDLTSYIHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 530

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKL+SRIVAEQSI KWS++IE ME+QV  +L++EREERA+RKAEMEATKAENMI H+
Sbjct: 531 RAGSKLRSRIVAEQSIIKWSQIIEKMENQVADVLQQEREERAIRKAEMEATKAENMIAHK 590

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EIFSRPK+TWF+T++EK L AKAAK+S+EK K SGNEV+SAQ AEDLKMKEKRKREREK
Sbjct: 591 DEIFSRPKRTWFVTEREKMLAAKAAKSSVEKEKGSGNEVMSAQQAEDLKMKEKRKREREK 650

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKL+AAREMLE+E    K  G G+NKK+K+GLSLV L YRRAKA KAV KA+D
Sbjct: 651 NLPRKKRRKLQAAREMLEDEDLTEKPEGSGKNKKEKTGLSLVDLGYRRAKAAKAVKKAMD 710

Query: 541 SGKIV--KQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSK 600
           +GKIV  K ++K+K+   RTQSR+EEM+E+FQ+DMSE+KQKR  S G G +KSK+SFKSK
Sbjct: 711 AGKIVQKKASKKSKQPPERTQSRTEEMQELFQSDMSEKKQKRR-SSGTGNRKSKNSFKSK 770

Query: 601 SRYKRK 605
           SRYKR+
Sbjct: 771 SRYKRR 775

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RH28_ARATH2.5e-23773.31DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1[more]
RH28_ORYSJ8.0e-23673.85DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0... [more]
DRS1_MAGO71.2e-12548.66ATP-dependent RNA helicase DRS1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4... [more]
DRS1_NEUCR2.0e-12547.16ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2... [more]
DDX27_DICDI2.2e-12445.32Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum GN=ddx27 P... [more]
Match NameE-valueIdentityDescription
A0A0A0LIW3_CUCSA2.3e-29893.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855940 PE=3 SV=1[more]
B9H4Z8_POPTR4.5e-27084.18Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26280g PE=3 SV=1[more]
A0A067HB44_CITSI5.9e-27084.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004808mg PE=3 SV=1[more]
A0A067HAQ5_CITSI5.9e-27084.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004808mg PE=3 SV=1[more]
A0A0R0IVA1_SOYBN7.7e-27083.47Uncharacterized protein OS=Glycine max GN=GLYMA_08G313100 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G16630.11.4e-23873.31 DEA(D/H)-box RNA helicase family protein[more]
AT5G60990.11.4e-6537.13 DEA(D/H)-box RNA helicase family protein[more]
AT1G16280.17.1e-6541.03 RNA helicase 36[more]
AT2G47330.11.8e-5535.45 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT5G63120.29.6e-5435.73 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
Match NameE-valueIdentityDescription
gi|449460106|ref|XP_004147787.1|3.3e-29893.55PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X1 [Cucumis sativus][more]
gi|778686567|ref|XP_011652411.1|3.3e-29893.55PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis sativus][more]
gi|659133141|ref|XP_008466577.1|5.6e-29893.39PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Cucumis melo][more]
gi|1009118167|ref|XP_015875716.1|2.6e-27184.96PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Ziziphus jujuba][more]
gi|743903430|ref|XP_011045064.1|4.5e-27184.16PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Populus euphratica... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR000629RNA-helicase_DEAD-box_CS
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g09390.1Cp4.1LG06g09390.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 149..157
scor
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 234..338
score: 1.0
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 253..338
score: 8.3
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 233..377
score: 20
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 22..191
score: 1.7
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 17..218
score: 5.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 29..203
score: 30
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 1..26
score: 10
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 2..202
score: 4.7E-76coord: 203..368
score: 2.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 70..358
score: 8.49
NoneNo IPR availableunknownCoilCoilcoord: 376..423
scor
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..580
score:
NoneNo IPR availablePANTHERPTHR24031:SF277DEAD-BOX ATP-DEPENDENT RNA HELICASE 28coord: 1..580
score:

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g09390Bottle gourd (USVL1VR-Ls)cpelsiB632
Cp4.1LG06g09390Cucurbita pepo (Zucchini)cpecpeB460
Cp4.1LG06g09390Cucurbita maxima (Rimu)cmacpeB505
Cp4.1LG06g09390Cucurbita moschata (Rifu)cmocpeB464