Cp4.1LG06g08610 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG06g08610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionATPase, V0 complex, subunit E
LocationCp4.1LG06 : 5012014 .. 5015414 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTTTGATCTTTTGATTGCACGATCGAGGTCGAACGGGATCAACAATGGGATTCTTGGTGACGTCCCTGATTTTCGCCGTGATTGGAGTCATCGCGTGTTTTTGCTCCTTAATTTGCTGTAACAGAGGAGCTTCGACTAATTTGTAAAGTCCTTGCTCTTTATCGATTTTCTTTCTCTTTTTTCATACCTGTGTTTGGCTGTTGATCCAGAGGCAATTGAGCTGCTACGGAATCTAACTTGGTTGTTTTTGCTGATAACTATGTTTGATTTCCATATGCTATGCACCCGTGCTAAGTTTTGTTGATCATTAGTTCTGTTGTAGCCAATCGGCTATTGATTCTAAGTCCTTGTGTTGTTGGCTTTTAGACATTTAATCTGTTGTTTGTATTATAGGACATACATCAATGATTTTATATATCCAATGACTGCCATTTTTTGTAACACTGAAAGTTCAGGTGCTTGTATCTAGGCTGGTATATTGCATTATTAAGATTGTAAAATGAGTTTATAGGATTTAAGATCTCAACGAGTATCTGAATTATTAGATTCGCATAGAAACGTCTTTGGCAATGTGAAATTAGGGGGAACTATGTGGAATATTGAGTAGGATGGAACAATATTGTTGACAAAAGATGTGAAATTTGAGAATGTTTTATTGTGTCAATGGAGGTTATGAGAATTTTATAAGACTTTATTACTTATGCTAAAGAAAAACATCATTCTGGAAAATTGTTTATCGAAATTTATCTGGTCGAACTATGTCGTTCTTGGTTTAAGTATACTAGTGTTTTCTATCTTGGCGTCGAGGGTAAATAATTGGTAAGCTTGATGATGAAATAGCCTCATGGTTTGAAAACTGATCAGAACCTAAACTGTTGCTCTGGTGCTCGTCTTATTTGTAAATTGCTGGTTGTTTCTCCCTTTGGTGCTCGTCTCTGCAACTATGTCACTACTCACCCTTGGAGCAGTGTTCGTACTAGAGATTAAAACTCTCTTAAGTAGTAGTATAGCTGTGTAATTTTGTTTAATTTCCCTTACTCTAGAAAAGGTCATATATGGGTAGTCTCTGAAACTTCATATGTAGAGTTTACATTGCATGGTTAAATCTGCTTGCCTCATCAGGCATTCGATCCTTGACAACAAAACTTATGAAAGACTATTGATCATTCATCTGACTTTCATGGGATCTTAATACATATTTGAAGCAAACAATCGAAGTGCTATTGAACTTTTGTACCATTACTCCTTTGCATATGTGAATATTTTTTCATTGCACTTATGCAGGTGGCTAATATTGCTATTCTTCATTGCAGGTTTCACCTTACTTTGATAACTACTGCAACAATATGCTGCTGGATGATGTAAGTCTATGTTTTTCTTGCGTTTGATAACCACTAATTTCCTTTGTGCTATAAAATTAGCTTGTTATGATAGAGGACAAACTGATATTTTCCAAACGCGCCTTTTTTTTTTTTTGTTCCTTCTTTTGATTTTATTTAAGAAACCAAAGTTTCATTGAGAAAAATGAAAGAATGTACAAGAGCATGTAAAGCACACAAAAGGAGTCCTCAACTTTGGGAAAAGACCTCAATTCAAAAGAATACCACCAAGTTGTCAATTACAAAATAATTCAAATAGTAGACACCCATGAAGATGCATAGAATCGCACCACCTCCCACACCTCCAGTGAAGATTTTTCCACCCCTCTAAAGATCCTACTATTCTTCTCGAGCCACACTCCCGAGTCCTGACAAGATAGCATTTAACAGGCCTGCCACAAAACTCTTACCTTATCCCGAAAAGGAGAGTTCACTTAACCTCTCAATCAAAGAGGACCTATCCCTAATGTACGCGACCGCAACCCCAAACATACTAAAGCACCTACTCAAAACGAACTCAAGTTTTTGTCTAAAGCAACAAGCCGTTGCTTGCTTGGAGAGAAGCTCTAGTAAGATTTTTCTTTAGTGAAGAAAGATCCACCTAGAAGGAGAAAATATATTGTACAGCTGCAATAATGTATGCATTGATTAATGAAAACATAGAACCCGCAATAAAACCCTGGACCTTTGGCGGACGAGGCTTCTTGAAGAAGAAAAACATTAGAATGCACCATAAAATGCCCTGCTAGATGTAAATATATCGTGAAAATGTCGTAACAAATTTTGAAGGCTTTGGTAATTCTTAGGACTTGATAGGAGTCTTTTTCATAATATCGATACTTGCACACTAATATATACAAATAATGAGTCATAAAAATAAGGAGACAATCTTAGATTATAATGTCCACAACATAGATACTATAGTTAGGATGTTTCTTAAAATTCCATCAAGCAACCCCCGCGTTCCCCCTCAAGAAGGCTAATGGATATTTTCACCTATCAAATTGCTTGGAATCATGCACCAATCAACTGTGGTTAACTCGTGTTATTTGGCTACTTGTTGATACTAGAGGTGTACAAATAAAGACATTATCCAACTTTTTCTTTATGAAATGTCTATTGGTTTTAATGTATTTTATTAGGTCATGTTGGATTGGGTTGTTTGTAATATTAATTACTGACTTATTGACGATGAATATTTCTTTGAAGAAGTTTCAAAGAGACCAACTTACAAAATTCTTGACATTATTCTGAACTCTGGTCCTAAAATTGACTGGCTACCTTTTTTTCCCATCTCCATCTAACCAGATTTCCTCCTCCGTACGTACAATTATTTAATATAGACTTCTTATTATCAATTGATCCATCATAGCATCAATAGGCTTCTAGGTTTAATTTTAACCCTTTTAGTTTTCTGGGTGTTTTGTTGAAGGGCCCTAAATTAGGTAAATAAAAGCCTCTCTATCTGTTCTAGATCTTCTTTTCAGATTATGAATATATTGAATTCACTTCAACACATTGTTTTATAAACAGGCACTCACATTTCAGGACAACCTGTTATTGTTAGAGTTTCTATTATAATTAGACACTAAAGTTGCTTAATATATACCGACTACTAAATTTATTATGCATTTTTTTGAATTTAGGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCAATTCTGAATGACTCGGAGTGAAGATAATTTTGGGAACTTCTACTACTAGTTGTGTCTTATGAATCTAAATCATCACAGGGTTGCTGCTGATAACCCTAAGATATGTTCTATTTCCCAGGTTCCGTGAATCTATGTTGCGTTTTTCAATTTGAATCTGTGCAGTTCATAATTTGAAGATGACCTTCAATTGGGTTCTGTATTTTGTGTTTCCCAAGTGCTGTTTTAATTACTTTCCATCAAATTCTTGGGAAGATCGACCATTTCTCATAGCTATTTAATACAGAACTCCATTTATGAAATAAAGGTTGGGGATTTTATTTGCTTTTTT

mRNA sequence

GGTTTTGATCTTTTGATTGCACGATCGAGGTCGAACGGGATCAACAATGGGATTCTTGGTGACGTCCCTGATTTTCGCCGTGATTGGAGTCATCGCGTGTTTTTGCTCCTTAATTTGCTGTTTCACCTTACTTTGATAACTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCAATTCTGAATGACTCGGAGTGAAGATAATTTTGGGAACTTCTACTACTAGTTGTGTCTTATGAATCTAAATCATCACAGGGTTGCTGCTGATAACCCTAAGATATGTTCTATTTCCCAGGTTCCGTGAATCTATGTTGCGTTTTTCAATTTGAATCTGTGCAGTTCATAATTTGAAGATGACCTTCAATTGGGTTCTGTATTTTGTGTTTCCCAAGTGCTGTTTTAATTACTTTCCATCAAATTCTTGGGAAGATCGACCATTTCTCATAGCTATTTAATACAGAACTCCATTTATGAAATAAAGGTTGGGGATTTTATTTGCTTTTTT

Coding sequence (CDS)

GGTTTTGATCTTTTGATTGCACGATCGAGGTCGAACGGGATCAACAATGGGATTCTTGGTGACGTCCCTGATTTTCGCCGTGATTGGAGTCATCGCGTGTTTTTGCTCCTTAATTTGCTGTTTCACCTTACTTTGATAACTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCAATTCTGAATGACTCGGAGTGA

Protein sequence

GFDLLIARSRSNGINNGILGDVPDFRRDWSHRVFLLLNLLFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE
BLAST of Cp4.1LG06g08610 vs. Swiss-Prot
Match: VA0E1_ARATH (V-type proton ATPase subunit e1 OS=Arabidopsis thaliana GN=VHA-e1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.8e-11
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          L HLTL+ TAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

BLAST of Cp4.1LG06g08610 vs. Swiss-Prot
Match: VA0E2_ARATH (V-type proton ATPase subunit e2 OS=Arabidopsis thaliana GN=VHA-e2 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-10
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          L HLTL+ TAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

BLAST of Cp4.1LG06g08610 vs. TrEMBL
Match: A0A0A0K8A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G085210 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.4e-12
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

BLAST of Cp4.1LG06g08610 vs. TrEMBL
Match: S8CL70_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_09294 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.2e-11
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          L HLTLI TAT+CCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LLHLTLIITATVCCWMMWAIVYLAQMKPLIVPILNDSE 70

BLAST of Cp4.1LG06g08610 vs. TrEMBL
Match: C6T4U1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-11
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTL+ TATICCWMMWAIVYLAQMKPLIVPILN+ E
Sbjct: 33 LFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE 70

BLAST of Cp4.1LG06g08610 vs. TrEMBL
Match: A0A151SBE7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025892 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-11
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTL+ TATICCWMMWAIVYLAQMKPLIVPILN+ E
Sbjct: 33 LFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE 70

BLAST of Cp4.1LG06g08610 vs. TrEMBL
Match: M5WIA5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014415mg PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-11
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTL+ TATICCWMMWAIVYLAQMKPLIVPILN+ E
Sbjct: 33 LFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE 70

BLAST of Cp4.1LG06g08610 vs. TAIR10
Match: AT5G55290.1 (AT5G55290.1 ATPase, V0 complex, subunit E)

HSP 1 Score: 67.4 bits (163), Expect = 4.4e-12
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          L HLTL+ TAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

BLAST of Cp4.1LG06g08610 vs. TAIR10
Match: AT4G26710.1 (AT4G26710.1 ATPase, V0 complex, subunit E)

HSP 1 Score: 66.2 bits (160), Expect = 9.8e-12
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          L HLTL+ TAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

BLAST of Cp4.1LG06g08610 vs. NCBI nr
Match: gi|449467355|ref|XP_004151389.1| (PREDICTED: V-type proton ATPase subunit e1 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 9.2e-12
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

BLAST of Cp4.1LG06g08610 vs. NCBI nr
Match: gi|659093763|ref|XP_008447705.1| (PREDICTED: V-type proton ATPase subunit e [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 9.2e-12
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

BLAST of Cp4.1LG06g08610 vs. NCBI nr
Match: gi|527196729|gb|EPS65486.1| (hypothetical protein M569_09294 [Genlisea aurea])

HSP 1 Score: 75.1 bits (183), Expect = 6.0e-11
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          L HLTLI TAT+CCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LLHLTLIITATVCCWMMWAIVYLAQMKPLIVPILNDSE 70

BLAST of Cp4.1LG06g08610 vs. NCBI nr
Match: gi|255632721|gb|ACU16712.1| (unknown [Glycine max])

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTL+ TATICCWMMWAIVYLAQMKPLIVPILN+ E
Sbjct: 33 LFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE 70

BLAST of Cp4.1LG06g08610 vs. NCBI nr
Match: gi|595881040|ref|XP_007212338.1| (hypothetical protein PRUPE_ppa014415mg [Prunus persica])

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 40 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 78
          LFHLTL+ TATICCWMMWAIVYLAQMKPLIVPILN+ E
Sbjct: 33 LFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VA0E1_ARATH7.8e-1176.32V-type proton ATPase subunit e1 OS=Arabidopsis thaliana GN=VHA-e1 PE=2 SV=1[more]
VA0E2_ARATH1.7e-1076.32V-type proton ATPase subunit e2 OS=Arabidopsis thaliana GN=VHA-e2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K8A5_CUCSA6.4e-1297.37Uncharacterized protein OS=Cucumis sativus GN=Csa_7G085210 PE=4 SV=1[more]
S8CL70_9LAMI4.2e-1192.11Uncharacterized protein OS=Genlisea aurea GN=M569_09294 PE=4 SV=1[more]
C6T4U1_SOYBN7.1e-1189.47Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A151SBE7_CAJCA7.1e-1189.47Uncharacterized protein OS=Cajanus cajan GN=KK1_025892 PE=4 SV=1[more]
M5WIA5_PRUPE7.1e-1189.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014415mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G55290.14.4e-1276.32 ATPase, V0 complex, subunit E[more]
AT4G26710.19.8e-1276.32 ATPase, V0 complex, subunit E[more]
Match NameE-valueIdentityDescription
gi|449467355|ref|XP_004151389.1|9.2e-1297.37PREDICTED: V-type proton ATPase subunit e1 [Cucumis sativus][more]
gi|659093763|ref|XP_008447705.1|9.2e-1297.37PREDICTED: V-type proton ATPase subunit e [Cucumis melo][more]
gi|527196729|gb|EPS65486.1|6.0e-1192.11hypothetical protein M569_09294 [Genlisea aurea][more]
gi|255632721|gb|ACU16712.1|1.0e-1089.47unknown [Glycine max][more]
gi|595881040|ref|XP_007212338.1|1.0e-1089.47hypothetical protein PRUPE_ppa014415mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: INTERPRO
TermDefinition
IPR008389ATPase_V0-cplx_e1/e2_su
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0008150 biological_process
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g08610.1Cp4.1LG06g08610.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008389ATPase, V0 complex, subunit e1/e2PANTHERPTHR12263VACUOLAR ATP SYNTHASE SUBUNIT Hcoord: 40..77
score: 7.5
IPR008389ATPase, V0 complex, subunit e1/e2PFAMPF05493ATP_synt_Hcoord: 41..74
score: 4.4
NoneNo IPR availablePANTHERPTHR12263:SF3SUBFAMILY NOT NAMEDcoord: 40..77
score: 7.5

The following gene(s) are paralogous to this gene:

None