Cp4.1LG06g06390 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATGAATACGCGAAAAATTGGACGCGCCAAAATAAGCGATTTTCTGGCTCGGGGACTCGGAGAGTACAGAGCGACTGTAGCGGTTACCGCCGGGAATGTCTGTAATCGGATGGTATGGACCTCTGATTGATCTCTCTGAAGCTGCTCTTCACGTTGGCGATTTTGTTCAACTCCTCGTCTTCATTCATCGATCCACTCCTGTTGAGGTTTCTCTCCCTCTATTTCTGTTTACAATCTTTCTCATTGAACTTTGGATCATTGTCGGAGCAACTGTTATTTCCTTGTGTATAGTACAAATTGTCTAATGGTGGAGAGGTCATAAGGACGGACATCAAAGTAGCTGATGATACACGGTCGTTTTTCTCTGTATCACTATGGCAGAAGAAAATGGCAGCCACAGCAATTCCTGGCGATGTTGTATTGTTGCAGAGTAAGCTCCGATGTATGATTTGTAGTCGATTTATTTGAAGGACGGTTTCGGTTTTTGCTAGTAATAAGTTTCATCTCCAGTTTTAGGTAATGATTTCCAAGGCTATATTTATCTTTATTTTATTATTTGGTTCTTCGTTCGGGACGTTTCAGATGTGAAACTAAGGAAATTCGGAGATTCAGTTGAGGCAACAACTGTCCAGTGTTCTTCCCTAGTGTGTATAATCCACCCTTACGAAACACTTTTCTCTGAAGGTATAAGACTCCATTAATTTTTGCCTCACTCCTGCTCTTATTTTTGAGGTAATTGCTGCAATTTGTTGCATATTTCTCTAATATCCGAAGAACCGGTGCACGTTTCTATCTTTTGGCTCTCTGAGTTTATGATTTCCAGCTTAGCAGTGTATTGTTACATCTGGTTGGATTGTAATTGATAGTATACTGGGTTTAGGCCTTATGGATTAGTTAAATTGAATTTGTTTTAGTCGATCCAAGCAGAATAATAATAGGAACTAGATTATCGAGTTTCTTGGTAGCATCATCTGTTCGAAATGAGTTTTCTAGGATCAGACTCCATACCACGGAAGGATTAAAAGCATTGTCTATCAATATTCAATTGTTAACGCATTGCTTTAACGAAATTCACTTGGCCCTATATCAGTTGTAGAAAGCTTTCTTCTTAAAATTCTTATTGATCGACTATTTTTTAGAGTCTGTGGAAATAAAACCTAACCAGTCTTTGTGTATATAGGTGTAGACGAATTAATGGCCAATTGTCGAGTTGGTTTAGTAGCTAAAGAAAAGCTCAGGAAGGTAGTGGAATGGGTGAAGGGGGCTCGATCTACCTTCCGCAACATAAAATGGCATAGTGACCAAGTATTTAATTTTTGACCCACCATTATATTTTCTATCATTTTCATATTTATGCAATGTCTCCATTCTTTTTTACCTGTGTGCTATATTGAACATTAAAGCATGACATCTATCTATTTCCATTGTCTGAGTGGTTTAATTTGTAGAGAAGTAGACTGTGTCTAATTTAAACATTTGTGCGATGTGACATGGCTGGAAAATAACATTTGTGATGTTTTTTTTTTTTTTTTCTGATTTTTGAAGTCTCACTGGTTTTCAAGTTATTTTATGATCAAGTAGTTTTCTGATGCCTTGTGCATATGCAGACGATTTGTTGATTTTCTCTTTTCGTATATTACCTTTTAGATGCTCTCGTCGGCTTCTTGTACCTAATTACGATTATCAAAATTTGTTGGTAGTTAGGAAACGGGATTCATTTCACTTGTAAGGTTGATTTGGATTATGAACCCTAAGGACAAAACACTCGAAGGAAACCTACCTTCATAGGGTGGACGCATGGCAGATTTAGATGTGGAGAACTTACAACGGAAAACCGTTATTAAACCTATTGAATGTAATTTTGTAAATATGATTGGATTATGCTCATTCTAAATCACATTTTTAATGGTCGACTTAGATACAAATTGTTTGAACATAAGTGAAGATCTGAAGATTCTGAACATGTAATCCTGTACCATGACTGTAATATTTTTTTGCTTCCTAAAAGATAGTAGTTTTATCACAAATTTAGATATATAAATTTTGCATTTTAATGTTGATTATTATGAAGCTTATGGATGTAGTAGATTAAGCTTTTTGAATGAACAATCGATTGGAGTTGAAATTTCCACATGCAAGGCATGTCAATTTTAACTGATTGCCTAACTCCATATTAGACCCAAGTCCTGAATCTTTTGTTGTATCCATCATGTTGGACCACCTGATCGGAAAAAGAACCATTTCTTCTGCAACTGGAAATTGCCTGAGAAAAGGATGTCCAGAGACTGTTTCTCGCTATCCGAAGTATTATGTCTAACTGAATCATGCAAGGTCATATTTGATGCATCAATTGGTGAAATGTTTTCGTTACCCCCCTTGATTGATCTTGATGAACCTCGAAAAGAAAAGTTGTTTGTTAGCAGGCGATTGTACGATGAAGAAGATTTTGATCTAGCAGAAGATCTCATTTGCACCGGCTGTCAGTTATGTGGTACACCTTTAGGTCTGGAAAGTGGGTACGATAAGTTGCAGCATTTTTTATTTATATCACTGGAGATGGTTTTAATTCTGATTTCTGAACACTGCTCGTCCTTCTATTGCCTGCAGATCCGTGGTTGATCAGCTTTCTGCTCCACTTTATTGCTCAAAAAGCTTGAACCGCCTCCATGTAGTAAGCATGATATATAGGCCTTTCATGGTATGAACTATTCTTGCACTTTCTTCATGTTCTAAACTCTTCCACATTCAATATTAGTTTTCATCCCCGAAATTGGCTATATTATTTGTATCACTCAATTTGTCGTTGTCTTTTTAGTAGCACTTTAGGAGTTCACGGCTTTCCTTTATGATGTCCCTGGAGCTTCTAGTGCTGATGAATCTTCCATAAAGTGTTCGAATGTTAGTTTACATATATATCATATTTGATTGTTATTATATGCAAATATCTAGATATTTTGCTTACCATTATGGCTTATCATAGGTATCATATTTGTCATTTTATTATAGGCAAATAGGCAAATGTCTTGTATCCATTTATTGTTCTTTTCATTTCCTCTAAGGTTTATTTGATGATTATAAATAGAGAATTTCACCACCATTTAGGTGGAGTAGTTTTAGCAAATATTCTCAACAAGTATATTATCTTACACATTTTTTACTATCGATTGTATCCAAAATAACTTAGCCAAATATTGCCCGACACATGTGCTAGACTCGCTGTTCAGGTTCTGCAATTATTCTAATCATCATTTTGCTTCATCACGCTAACTAGTAATATCATATATATATGTCTTCTCTCGCCTATTTAGATAGTTTGTATTCGTTGCATTCTGAATCTAATATTTTGTTTTGCTGCAGCTATACGTGTGGGATGAATCAGAATGCATTCCTCTGCTTGTTAAGAATCAAGCAGCAGAAATCTTGTTTGGTAACATCAAAGCTGACAAGATTTACTCGCATTACAGTTGGCATAAGTCCCATCCTAATTCAAAAGCTATTATTGAATCAAGCCACTCAGGTGCTCCGGTTGCTAATTCTCCTCGAGCTATTGAGAAAGGACAGAGGCCCTCTAAAAATTTATATTTCATCTGGTTGATCCTTCTGAAAATGTTGCTGCATCAAGGAAAAAATAGCCCTCTTAAATTTGAAGTTACAGTAAACACCAGCTTGGACAGGGAGAATGGGAGATTTGAGATGGTTTCTTCGACATTCCCATGCTCCTCAACCAATCTATCTTTGGACTCTCACATTTGTGATCTGGGGAAAGAACAGCAGCCAAAGCGTAAGATTCATTAAAGAAAATTATGGATGGACATCTGAAATACATGAAGCAGATGGAGATTGGTAGTTTTTCTTACGGGGGAGATGTTAAAGTGTGGAAGAGCATGGGGAGAACTTAGTGCATAAAGGTTTGTTCGAGTTTCAAACCCATTTAATTCTGAAAATGAGTTCTTCAAACTAAGGTATAAATTTTTGAACATCGTAAGTTTACGCCACTCTTGTATCGATAAAGAATCAACCCAATGGAAGCTCTAATACCAAATGATAAGGAATCACTATAGGAAAGTAAAATTCAAATTATCTTGTTGATTGAATATCTCAAAACAGGAATATTTGTTTGAGTTTCGAATCACTCTACGAGCAAACATAC CATGAATACGCGAAAAATTGGACGCGCCAAAATAAGCGATTTTCTGGCTCGGGGACTCGGAGAGTACAGAGCGACTGTAGCGGTTACCGCCGGGAATGTCTGTAATCGGATGGTATGGACCTCTGATTGATCTCTCTGAAGCTGCTCTTCACGTTGGCGATTTTGTTCAACTCCTCGTCTTCATTCATCGATCCACTCCTGTTGAGTACAAATTGTCTAATGGTGGAGAGGTCATAAGGACGGACATCAAAGTAGCTGATGATACACGGTCGTTTTTCTCTGTATCACTATGGCAGAAGAAAATGGCAGCCACAGCAATTCCTGGCGATGTTGTATTGTTGCAGAATGTGAAACTAAGGAAATTCGGAGATTCAGTTGAGGCAACAACTGTCCAGTGTTCTTCCCTAGTGTGTATAATCCACCCTTACGAAACACTTTTCTCTGAAGGTGTAGACGAATTAATGGCCAATTGTCGAGTTGGTTTAGTAGCTAAAGAAAAGCTCAGGAAGGTAGTGGAATGGGTGAAGGGGGCTCGATCTACCTTCCGCAACATAAAATGGCATAGTGACCAAGTCATATTTGATGCATCAATTGGTGAAATGTTTTCGTTACCCCCCTTGATTGATCTTGATGAACCTCGAAAAGAAAAGTTGTTTGTTAGCAGGCGATTGTACGATGAAGAAGATTTTGATCTAGCAGAAGATCTCATTTGCACCGGCTGTCAGTTATGTGGTACACCTTTAGGTCTGGAAAGTGGATCCGTGGTTGATCAGCTTTCTGCTCCACTTTATTGCTCAAAAAGCTTGAACCGCCTCCATGTAGTAAGCATGATATATAGGCCTTTCATGCTATACGTGTGGGATGAATCAGAATGCATTCCTCTGCTTGTTAAGAATCAAGCAGCAGAAATCTTGTTTGGTAACATCAAAGCTGACAAGATTTACTCGCATTACAGTTGGCATAAGTCCCATCCTAATTCAAAAGCTATTATTGAATCAAGCCACTCAGGTGCTCCGGTTGCTAATTCTCCTCGAGCTATTGAGAAAGGACAGAGGCCCTCTAAAAATTTATATTTCATCTGGTTGATCCTTCTGAAAATGTTGCTGCATCAAGGAAAAAATAGCCCTCTTAAATTTGAAGTTACAGTAAACACCAGCTTGGACAGGGAGAATGGGAGATTTGAGATGGTTTCTTCGACATTCCCATGCTCCTCAACCAATCTATCTTTGGACTCTCACATTTGTGATCTGGGGAAAGAACAGCAGCCAAAGCGTAAGATTCATTAAAGAAAATTATGGATGGACATCTGAAATACATGAAGCAGATGGAGATTGGTAGTTTTTCTTACGGGGGAGATGTTAAAGTGTGGAAGAGCATGGGGAGAACTTAGTGCATAAAGGTTTGTTCGAGTTTCAAACCCATTTAATTCTGAAAATGAGTTCTTCAAACTAAGGTATAAATTTTTGAACATCGTAAGTTTACGCCACTCTTGTATCGATAAAGAATCAACCCAATGGAAGCTCTAATACCAAATGATAAGGAATCACTATAGGAAAGTAAAATTCAAATTATCTTGTTGATTGAATATCTCAAAACAGGAATATTTGTTTGAGTTTCGAATCACTCTACGAGCAAACATAC ATGTCTGTAATCGGATGGTATGGACCTCTGATTGATCTCTCTGAAGCTGCTCTTCACGTTGGCGATTTTGTTCAACTCCTCGTCTTCATTCATCGATCCACTCCTGTTGAGTACAAATTGTCTAATGGTGGAGAGGTCATAAGGACGGACATCAAAGTAGCTGATGATACACGGTCGTTTTTCTCTGTATCACTATGGCAGAAGAAAATGGCAGCCACAGCAATTCCTGGCGATGTTGTATTGTTGCAGAATGTGAAACTAAGGAAATTCGGAGATTCAGTTGAGGCAACAACTGTCCAGTGTTCTTCCCTAGTGTGTATAATCCACCCTTACGAAACACTTTTCTCTGAAGGTGTAGACGAATTAATGGCCAATTGTCGAGTTGGTTTAGTAGCTAAAGAAAAGCTCAGGAAGGTAGTGGAATGGGTGAAGGGGGCTCGATCTACCTTCCGCAACATAAAATGGCATAGTGACCAAGTCATATTTGATGCATCAATTGGTGAAATGTTTTCGTTACCCCCCTTGATTGATCTTGATGAACCTCGAAAAGAAAAGTTGTTTGTTAGCAGGCGATTGTACGATGAAGAAGATTTTGATCTAGCAGAAGATCTCATTTGCACCGGCTGTCAGTTATGTGGTACACCTTTAGGTCTGGAAAGTGGATCCGTGGTTGATCAGCTTTCTGCTCCACTTTATTGCTCAAAAAGCTTGAACCGCCTCCATGTAGTAAGCATGATATATAGGCCTTTCATGCTATACGTGTGGGATGAATCAGAATGCATTCCTCTGCTTGTTAAGAATCAAGCAGCAGAAATCTTGTTTGGTAACATCAAAGCTGACAAGATTTACTCGCATTACAGTTGGCATAAGTCCCATCCTAATTCAAAAGCTATTATTGAATCAAGCCACTCAGGTGCTCCGGTTGCTAATTCTCCTCGAGCTATTGAGAAAGGACAGAGGCCCTCTAAAAATTTATATTTCATCTGGTTGATCCTTCTGAAAATGTTGCTGCATCAAGGAAAAAATAGCCCTCTTAAATTTGAAGTTACAGTAAACACCAGCTTGGACAGGGAGAATGGGAGATTTGAGATGGTTTCTTCGACATTCCCATGCTCCTCAACCAATCTATCTTTGGACTCTCACATTTGTGATCTGGGGAAAGAACAGCAGCCAAAGCGTAAGATTCATTAA MSVIGWYGPLIDLSEAALHVGDFVQLLVFIHRSTPVEYKLSNGGEVIRTDIKVADDTRSFFSVSLWQKKMAATAIPGDVVLLQNVKLRKFGDSVEATTVQCSSLVCIIHPYETLFSEGVDELMANCRVGLVAKEKLRKVVEWVKGARSTFRNIKWHSDQVIFDASIGEMFSLPPLIDLDEPRKEKLFVSRRLYDEEDFDLAEDLICTGCQLCGTPLGLESGSVVDQLSAPLYCSKSLNRLHVVSMIYRPFMLYVWDESECIPLLVKNQAAEILFGNIKADKIYSHYSWHKSHPNSKAIIESSHSGAPVANSPRAIEKGQRPSKNLYFIWLILLKMLLHQGKNSPLKFEVTVNTSLDRENGRFEMVSSTFPCSSTNLSLDSHICDLGKEQQPKRKIH
BLAST of Cp4.1LG06g06390 vs. TrEMBL
Match: A0A0A0KYL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G371945 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-132 Identity = 263/410 (64.15%), Postives = 297/410 (72.44%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. TrEMBL
Match: W9QYA8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020164 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.3e-112 Identity = 219/425 (51.53%), Postives = 283/425 (66.59%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. TrEMBL
Match: A0A067K9K9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12064 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 8.5e-108 Identity = 216/415 (52.05%), Postives = 272/415 (65.54%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. TrEMBL
Match: M5XMS6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016406mg PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.4e-107 Identity = 213/411 (51.82%), Postives = 276/411 (67.15%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. TrEMBL
Match: B9H7C4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15940g PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 7.9e-106 Identity = 209/411 (50.85%), Postives = 272/411 (66.18%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. NCBI nr
Match: gi|659086826|ref|XP_008444128.1| (PREDICTED: uncharacterized protein LOC103487569 [Cucumis melo]) HSP 1 Score: 622.1 bits (1603), Expect = 6.8e-175 Identity = 321/416 (77.16%), Postives = 342/416 (82.21%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. NCBI nr
Match: gi|449449879|ref|XP_004142692.1| (PREDICTED: uncharacterized protein LOC101215044 [Cucumis sativus]) HSP 1 Score: 480.7 bits (1236), Expect = 2.4e-132 Identity = 263/410 (64.15%), Postives = 297/410 (72.44%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. NCBI nr
Match: gi|731428136|ref|XP_010664232.1| (PREDICTED: uncharacterized protein LOC100855011 isoform X2 [Vitis vinifera]) HSP 1 Score: 426.8 bits (1096), Expect = 4.2e-116 Identity = 223/430 (51.86%), Postives = 284/430 (66.05%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. NCBI nr
Match: gi|731428134|ref|XP_010664231.1| (PREDICTED: uncharacterized protein LOC100855011 isoform X1 [Vitis vinifera]) HSP 1 Score: 426.4 bits (1095), Expect = 5.4e-116 Identity = 223/431 (51.74%), Postives = 284/431 (65.89%), Query Frame = 1
BLAST of Cp4.1LG06g06390 vs. NCBI nr
Match: gi|703080215|ref|XP_010091362.1| (hypothetical protein L484_020164 [Morus notabilis]) HSP 1 Score: 412.9 bits (1060), Expect = 6.2e-112 Identity = 219/425 (51.53%), Postives = 283/425 (66.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |