Cp4.1LG06g06340 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g06340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAcyl-CoA N-acyltransferases (NAT) superfamily protein
LocationCp4.1LG06 : 3904578 .. 3904871 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTCCAAACCCTATAGCAGGATCTGGAACCAACCCTCCAAAGATAATCTGGAATGAAGCCCAACGGAGGTTCGAAACAGAGGACAAGAAGGCATATCTTCAGTACGTCATCAAAAACCAAGGTAAAGTCATTGATATGATTCACACTTTCGTTCCTTCTTCCAAAAGGGGTTTGGGATTGGCTTCTCATCTCTGCGCCGCCGCCTTCAATCACGCCGCCGCTCATTCCTTGGCCGTCGTTCCCTCTTGTTCTTACATTTCCGTGAGTTCTCTTCTCTCCAACTTCTAG

mRNA sequence

ATGGCGACTCCAAACCCTATAGCAGGATCTGGAACCAACCCTCCAAAGATAATCTGGAATGAAGCCCAACGGAGGTTCGAAACAGAGGACAAGAAGGCATATCTTCAGTACGTCATCAAAAACCAAGGTAAAGTCATTGATATGATTCACACTTTCGTTCCTTCTTCCAAAAGGGGTTTGGGATTGGCTTCTCATCTCTGCGCCGCCGCCTTCAATCACGCCGCCGCTCATTCCTTGGCCGTCGTTCCCTCTTGTTCTTACATTTCCGTGAGTTCTCTTCTCTCCAACTTCTAG

Coding sequence (CDS)

ATGGCGACTCCAAACCCTATAGCAGGATCTGGAACCAACCCTCCAAAGATAATCTGGAATGAAGCCCAACGGAGGTTCGAAACAGAGGACAAGAAGGCATATCTTCAGTACGTCATCAAAAACCAAGGTAAAGTCATTGATATGATTCACACTTTCGTTCCTTCTTCCAAAAGGGGTTTGGGATTGGCTTCTCATCTCTGCGCCGCCGCCTTCAATCACGCCGCCGCTCATTCCTTGGCCGTCGTTCCCTCTTGTTCTTACATTTCCGTGAGTTCTCTTCTCTCCAACTTCTAG

Protein sequence

MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGLGLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSNF
Homology
[Close]
BLAST of Cp4.1LG06g06340 vs. Swiss-Prot
Match: Y1754_ARATH (Acetyltransferase At1g77540 OS=Arabidopsis thaliana GN=At1g77540 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 6.8e-28
Identity = 54/89 (60.67%), Postives = 74/89 (83.15%), Query Frame = 1 

Query: 8  AGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGLGLASHLC 67
          A   T PPKI+WNE +RRFETED +A+++Y ++N GKV+D++HT+VPS KRGLGLASHLC
Sbjct: 10 AKMATEPPKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLC 69

Query: 68 AAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
           AAF HA++HS++++PSCSY+S + L  N
Sbjct: 70 VAAFEHASSHSISIIPSCSYVSDTFLPRN 98

[Close]
BLAST of Cp4.1LG06g06340 vs. TrEMBL
Match: A0A0A0KY68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G364010 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.2e-36
Identity = 78/96 (81.25%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MA+ NP AGSGT+ PKIIWN+AQRRFETEDKKAYLQY+IKN GKV+DMIHTFVPSSKRGL
Sbjct: 1  MASTNPAAGSGTDAPKIIWNQAQRRFETEDKKAYLQYLIKNGGKVMDMIHTFVPSSKRGL 60

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA AHSL+V+PSCSYIS + L  N
Sbjct: 61 GLASHLCLAAFNHADAHSLSVIPSCSYISDTFLPRN 96

[Close]
BLAST of Cp4.1LG06g06340 vs. TrEMBL
Match: W9SD96_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025477 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-28
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 1 

Query: 1  MATPNPIA----GSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSS 60
          MAT + +     G     PKI WNEAQRRFETEDKKAYLQY +++ GKV+D++HT+VP S
Sbjct: 1  MATTSSVGVGGGGDSGGAPKIAWNEAQRRFETEDKKAYLQYALRDDGKVMDLVHTYVPPS 60

Query: 61 KRGLGLASHLCAAAFNHAAAHSLAVVPSCSYISVSS 93
          KRGLGLASHLC AAF+HA +HSL+V+P+CSYISVSS
Sbjct: 61 KRGLGLASHLCVAAFDHAKSHSLSVIPTCSYISVSS 96

[Close]
BLAST of Cp4.1LG06g06340 vs. TrEMBL
Match: A0A0B0MM62_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_23264 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-28
Identity = 57/81 (70.37%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 9  GSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGLGLASHLCA 68
          G+    PKI+WNE QRRFETEDKKAY++YV+++ GKV+D+IHTFVPSSKRG+GLASHLC 
Sbjct: 8  GASPEAPKIVWNETQRRFETEDKKAYIEYVLRHDGKVMDIIHTFVPSSKRGMGLASHLCV 67

Query: 69 AAFNHAAAHSLAVVPSCSYIS 90
          AAF+HA +HSL ++PSCSY+S
Sbjct: 68 AAFHHANSHSLTIIPSCSYVS 88

[Close]
BLAST of Cp4.1LG06g06340 vs. TrEMBL
Match: M5XYY9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013628mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 8.1e-28
Identity = 61/96 (63.54%), Postives = 80/96 (83.33%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MATP   A S    PKI+WNEA+RRFE+ED+KAY++YV++  GKV+D++HTFVPSSKRGL
Sbjct: 1  MATP--AASSAAEAPKIVWNEAKRRFESEDQKAYIEYVLRENGKVMDLVHTFVPSSKRGL 60

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA ++S++V+P+CSY+S + L  N
Sbjct: 61 GLASHLCVAAFNHAKSNSISVIPTCSYVSDTFLPRN 94

[Close]
BLAST of Cp4.1LG06g06340 vs. TrEMBL
Match: A0A0D2MEH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G222300 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-27
Identity = 58/88 (65.91%), Postives = 77/88 (87.50%), Query Frame = 1 

Query: 9  GSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGLGLASHLCA 68
          G+    PKI+WNE QRRFETED++AY++YV+++ GKV+D+IHTFVPSSKRG+GLASHLC 
Sbjct: 8  GASPEAPKIVWNETQRRFETEDEEAYIEYVLRHDGKVMDIIHTFVPSSKRGMGLASHLCD 67

Query: 69 AAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          AAF+HA +HSL+++PSCSY+S + LL N
Sbjct: 68 AAFHHANSHSLSIIPSCSYVSDTFLLRN 95

[Close]
BLAST of Cp4.1LG06g06340 vs. TAIR10
Match: AT1G77540.1 (AT1G77540.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 3.8e-29
Identity = 54/89 (60.67%), Postives = 74/89 (83.15%), Query Frame = 1 

Query: 8  AGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGLGLASHLC 67
          A   T PPKI+WNE +RRFETED +A+++Y ++N GKV+D++HT+VPS KRGLGLASHLC
Sbjct: 10 AKMATEPPKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLC 69

Query: 68 AAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
           AAF HA++HS++++PSCSY+S + L  N
Sbjct: 70 VAAFEHASSHSISIIPSCSYVSDTFLPRN 98

[Close]
BLAST of Cp4.1LG06g06340 vs. TAIR10
Match: AT1G21770.1 (AT1G21770.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26
Identity = 50/88 (56.82%), Postives = 69/88 (78.41%), Query Frame = 1 

Query: 9  GSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGLGLASHLCA 68
          G+ T  PKI+WNE + RFET+D +A+++Y +KN GKV+D++ TFVP SK GLGLASHLC 
Sbjct: 4  GTATEKPKIVWNEGRHRFETDDHEAFIEYKMKNDGKVMDLVRTFVPPSKAGLGLASHLCV 63

Query: 69 AAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          AAF HA+ HS +++P+CSY+S + L  N
Sbjct: 64 AAFEHASEHSFSIIPTCSYVSETFLHRN 91

[Close]
BLAST of Cp4.1LG06g06340 vs. NCBI nr
Match: gi|449449743|ref|XP_004142624.1| (PREDICTED: acetyltransferase At1g77540 isoform X2 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 8.9e-36
Identity = 78/96 (81.25%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MA+ NP AGSGT+ PKIIWN+AQRRFETEDKKAYLQY+IKN GKV+DMIHTFVPSSKRGL
Sbjct: 1  MASTNPAAGSGTDAPKIIWNQAQRRFETEDKKAYLQYLIKNGGKVMDMIHTFVPSSKRGL 60

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA AHSL+V+PSCSYIS + L  N
Sbjct: 61 GLASHLCLAAFNHADAHSLSVIPSCSYISDTFLPRN 96

[Close]
BLAST of Cp4.1LG06g06340 vs. NCBI nr
Match: gi|778694417|ref|XP_011653804.1| (PREDICTED: acetyltransferase At1g77540 isoform X1 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 8.9e-36
Identity = 78/96 (81.25%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MA+ NP AGSGT+ PKIIWN+AQRRFETEDKKAYLQY+IKN GKV+DMIHTFVPSSKRGL
Sbjct: 1  MASTNPAAGSGTDAPKIIWNQAQRRFETEDKKAYLQYLIKNGGKVMDMIHTFVPSSKRGL 60

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA AHSL+V+PSCSYIS + L  N
Sbjct: 61 GLASHLCLAAFNHADAHSLSVIPSCSYISDTFLPRN 96

[Close]
BLAST of Cp4.1LG06g06340 vs. NCBI nr
Match: gi|659086869|ref|XP_008444152.1| (PREDICTED: acetyltransferase At1g77540 isoform X2 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 8.9e-36
Identity = 78/96 (81.25%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MA+ NPIAGSGT+ PKIIWNEAQ+RFETEDKKAYLQY+IKN GKV+DMIHTFVPSSKRGL
Sbjct: 3  MASTNPIAGSGTDAPKIIWNEAQQRFETEDKKAYLQYLIKNGGKVMDMIHTFVPSSKRGL 62

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA  HSL+V+PSCSYIS + L  N
Sbjct: 63 GLASHLCLAAFNHADGHSLSVIPSCSYISDTFLPRN 98

[Close]
BLAST of Cp4.1LG06g06340 vs. NCBI nr
Match: gi|659086867|ref|XP_008444151.1| (PREDICTED: acetyltransferase At1g77540 isoform X1 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 8.9e-36
Identity = 78/96 (81.25%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MA+ NPIAGSGT+ PKIIWNEAQ+RFETEDKKAYLQY+IKN GKV+DMIHTFVPSSKRGL
Sbjct: 3  MASTNPIAGSGTDAPKIIWNEAQQRFETEDKKAYLQYLIKNGGKVMDMIHTFVPSSKRGL 62

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA  HSL+V+PSCSYIS + L  N
Sbjct: 63 GLASHLCLAAFNHADGHSLSVIPSCSYISDTFLPRN 98

[Close]
BLAST of Cp4.1LG06g06340 vs. NCBI nr
Match: gi|470109175|ref|XP_004290877.1| (PREDICTED: acetyltransferase At1g77540 [Fragaria vesca subsp. vesca])

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29
Identity = 61/96 (63.54%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 1  MATPNPIAGSGTNPPKIIWNEAQRRFETEDKKAYLQYVIKNQGKVIDMIHTFVPSSKRGL 60
          MAT + +AG G++ PKI+WNEA+ RFE+EDKKAY+ YV++  GKV+D++HT+VPSSKRGL
Sbjct: 1  MATADDVAGGGSSAPKIVWNEAKHRFESEDKKAYIDYVLRENGKVMDLVHTYVPSSKRGL 60

Query: 61 GLASHLCAAAFNHAAAHSLAVVPSCSYISVSSLLSN 97
          GLASHLC AAFNHA A+S++V+P+CSY+S + L  N
Sbjct: 61 GLASHLCVAAFNHAKANSISVIPTCSYVSDTFLPKN 96

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g06340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1754_ARATH6.8e-2860.67Acetyltransferase At1g77540 OS=Arabidopsis thaliana GN=At1g77540 PE=1 SV=2[more]
BLAST of Cp4.1LG06g06340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY68_CUCSA6.2e-3681.25Uncharacterized protein OS=Cucumis sativus GN=Csa_4G364010 PE=4 SV=1[more]
W9SD96_9ROSA1.2e-2866.67Uncharacterized protein OS=Morus notabilis GN=L484_025477 PE=4 SV=1[more]
A0A0B0MM62_GOSAR6.2e-2870.37Uncharacterized protein OS=Gossypium arboreum GN=F383_23264 PE=4 SV=1[more]
M5XYY9_PRUPE8.1e-2863.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013628mg PE=4 SV=1[more]
A0A0D2MEH2_GOSRA1.1e-2765.91Uncharacterized protein OS=Gossypium raimondii GN=B456_002G222300 PE=4 SV=1[more]
BLAST of Cp4.1LG06g06340 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77540.13.8e-2960.67 Acyl-CoA N-acyltransferases (NAT) superfamily protein[more]
AT1G21770.11.8e-2656.82 Acyl-CoA N-acyltransferases (NAT) superfamily protein[more]
BLAST of Cp4.1LG06g06340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449743|ref|XP_004142624.1|8.9e-3681.25PREDICTED: acetyltransferase At1g77540 isoform X2 [Cucumis sativus][more]
gi|778694417|ref|XP_011653804.1|8.9e-3681.25PREDICTED: acetyltransferase At1g77540 isoform X1 [Cucumis sativus][more]
gi|659086869|ref|XP_008444152.1|8.9e-3681.25PREDICTED: acetyltransferase At1g77540 isoform X2 [Cucumis melo][more]
gi|659086867|ref|XP_008444151.1|8.9e-3681.25PREDICTED: acetyltransferase At1g77540 isoform X1 [Cucumis melo][more]
gi|470109175|ref|XP_004290877.1|1.6e-2963.54PREDICTED: acetyltransferase At1g77540 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005777 peroxisome
cellular_component GO:0005575 cellular_component
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g06340.1Cp4.1LG06g06340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016181Acyl-CoA N-acyltransferaseGENE3DG3DSA:3.40.630.30coord: 14..90
score: 1.3
IPR016181Acyl-CoA N-acyltransferaseunknownSSF55729Acyl-CoA N-acyltransferases (Nat)coord: 16..89
score: 7.82
NoneNo IPR availablePANTHERPTHR31435FAMILY NOT NAMEDcoord: 13..88
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g06340Cucsa.125510Cucumber (Gy14) v1cgycpeB0323
Cp4.1LG06g06340CmoCh09G007890Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g06340Cla023165Watermelon (97103) v1cpewmB776
Cp4.1LG06g06340Csa4G364010Cucumber (Chinese Long) v2cpecuB784
Cp4.1LG06g06340MELO3C010476Melon (DHL92) v3.5.1cpemeB730
Cp4.1LG06g06340ClCG11G015720Watermelon (Charleston Gray)cpewcgB695
Cp4.1LG06g06340CSPI04G17870Wild cucumber (PI 183967)cpecpiB786
Cp4.1LG06g06340Lsi04G023900Bottle gourd (USVL1VR-Ls)cpelsiB641
Cp4.1LG06g06340MELO3C010476.2Melon (DHL92) v3.6.1cpemedB863
Cp4.1LG06g06340CsaV3_4G028290Cucumber (Chinese Long) v3cpecucB0971
Cp4.1LG06g06340CsGy4G017010Cucumber (Gy14) v2cgybcpeB564
Cp4.1LG06g06340Carg17029Silver-seed gourdcarcpeB0245
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g06340Cucurbita pepo (Zucchini)cpecpeB229
Cp4.1LG06g06340Cucurbita pepo (Zucchini)cpecpeB405
Cp4.1LG06g06340Cucurbita pepo (Zucchini)cpecpeB465
Cp4.1LG06g06340Cucurbita pepo (Zucchini)cpecpeB468
Cp4.1LG06g06340Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g06340Cucurbita maxima (Rimu)cmacpeB334
Cp4.1LG06g06340Cucurbita maxima (Rimu)cmacpeB503
Cp4.1LG06g06340Cucurbita maxima (Rimu)cmacpeB513
Cp4.1LG06g06340Cucurbita maxima (Rimu)cmacpeB755
Cp4.1LG06g06340Cucurbita moschata (Rifu)cmocpeB298
Cp4.1LG06g06340Cucurbita moschata (Rifu)cmocpeB461
Cp4.1LG06g06340Cucurbita moschata (Rifu)cmocpeB471
Cp4.1LG06g06340Cucurbita moschata (Rifu)cmocpeB709
Cp4.1LG06g06340Bottle gourd (USVL1VR-Ls)cpelsiB653
Cp4.1LG06g06340Watermelon (Charleston Gray)cpewcgB715
Cp4.1LG06g06340Watermelon (97103) v1cpewmB763
Cp4.1LG06g06340Melon (DHL92) v3.5.1cpemeB722
Cp4.1LG06g06340Cucumber (Gy14) v2cgybcpeB869
Cp4.1LG06g06340Silver-seed gourdcarcpeB0628
Cp4.1LG06g06340Silver-seed gourdcarcpeB0947
Cp4.1LG06g06340Silver-seed gourdcarcpeB0951
Cp4.1LG06g06340Silver-seed gourdcarcpeB1162
Cp4.1LG06g06340Wax gourdcpewgoB0979
Cp4.1LG06g06340Wax gourdcpewgoB0998