Cp4.1LG06g04070 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g04070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRhamnogalacturonate lyase family protein
LocationCp4.1LG06 : 2689080 .. 2692870 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATAGCAGATAACAGAAAGAGATGGATGCCACTCCCTGAGGATAGAGTAGGCCGCAGAGGCAAAACCTTGGATTTTCCTGAAGCTGTATTACTAGTCCATCCTAGAGAAGCTGCGTTCAAGGGAGAGGTGGACGATAAGTACCAATATTCTTGTGAAAATAAGGATCTTAAAGTGCATGGATGGATATCCATGGATCCTTCCGACGACCCTCCGGTGGGTTTCTGGCAAATCACTCCGAGCAGCGAGTTCCGATCCGGCGGACCGCTCAAACAGAACCTCACCTCTCATGTGGGACCATATGCTCTTGCGGTAAGTATTACCTCCTGGATATTGTCTACTTTGAGCCTAAGCTCTCGTCACTGAGGTGGGACTCCTCTCCCAACAATCCTCAATAATACTCCCCTCGAACAAAATACGCCATAGAGCCTCCCATGAGGCCTATGAAACCCTCGAACAACTTTCCCTTAATCGAGGTTCGACTATTTCTTTGTAGCCCTCGAACACTTTAGTCTTTTGACTACAATTTTGAGGCTTACAACTTCTTTGTTCAATATTTGATAATTCTATGAGGCTTATGGAACCCTCGAACAACCTCCCCTTAATCGAGGTTCGACTTTTTCTTTAGAACCCTCGAACACTTTAGTCTTTTGACTACAACTTCGAGACTCACAACTTCTTTGTTCGATATCTGATAATTTTATTGACATCACGTATTCCTTATAAATTTATGATCAACCCCTTAATCAGCGGACGCGAACCAAGTTCAGTATTAAAGAATTTACATAATTGGCACAAATTTCAGATGTTTCTTAGCGCTCACTATGGAGGAGAGGAGTTGGTGCTGAAGCTGAATCCTGATGAGCCGTGGAAGAAAGTGTTTGGGCCTGTCTTTTTCTATCTTAATTCTGTTCCTAATGGAACTGATCCACTTTCTTTGTGGGAAGATGCTAAAATTCAGGTATTTTTCATTTATTTATTTATTTTTATTATGAATATATATATATTTATTTTAATCTCACTAATTTCTCAGATGACGAAGGAAGTTCAAAGCTGGCCCTATTCTTTTCCAGCTTCTGAGAATTTCCCACCACCAAACCAACGTGGTAGATTGACTGGCAACTTATTTGTCCTTGATAGGTACGTAACAACTCAACTCCACCGCTAGTAGATATTGTCCGTTTTCGTCGTTACGTATGGCTGTCAGCCTCCTTTGGAATCTAGCAAGGAATCTAACAATACCCTCGTGGGGTCCAACGTCATAAATGACACACCGCTCGGTTTCTGGCACTGATACCATTTGTAACAACTTAAGCTCACCGCTAATCAATATTGTCCATTTTGGCTCATTATGTATTGTGTTGTGAGATTCCTCGCTGGACCCTAAAAGGGGTGGATTGTGAGATCTGGCATTGGTTGGAGAGGAGAACAAAATATTTCTGATAAGGGTACTGTGAGACTTACGACGATATATAACGAGCTAAATTGGACAATATCTGGTAGGGGTGAGCTTGGATTATTACAAATGGTATTAGAGTCAGACACCGAATGATGTCCTTCCTTATAAAAGTGTGGAAACTTCCTCGTAACAGACGTGTTTTTAAACTTTGAAGCGGATGGCGATAAATTATTTTTATAAAAATTAATAGTAATTTCACTGCATTTGTGAGCAGATATGCTAAGCAAGAGCAAATGCCGGCAGCTGAGGCATATGTGGGACTGGCAGCGCCGGGAGACGCTGGATCATGGCAGACCGAAACCAAGGTACTGAGCGATTGATTATTTGATTTACACCAAATAATGAGAACTAAGAAAATGATGTTATTTAAACCATGATCAGGGCTACCAATTTTGGACCAAAACAGATGCATATGGCTCGTTTAGCATCGAAAATGTACGCATCGGCGACTACAATCTTTATGCTTGGGTTCCTGGCTTCATTGGTGACTACCGTTACGACGTTGTCATTAGCGTCTCTGCAGGTTTTGATTCACATTTCAAATATCTTCCTTTAATTAAGAATAAAATATACATTATGAATTAAGAGGTTAGACGTTCAAATTCACAAAAGACAAAATTCTACGTGAATGAAGCTTATAACTCGAGAAGTGAAAGAACTCTCAACATTTGTAATTATATACAGGTAGTGATATGGACGTGGGGGATTTTGTTTTTGAGCCGCCTAGGAATGGTCCAACGCTATGGGAAATAGGCATTCCTGATCGCTCTGCAGCTGAATTCTATATTCCTGATCCTAACCCAAATTACATTAACAAATTATACGTCGACCATCCAGATAGGTACGAGAGCTTTTCTCTTTCAACTACAGTTAATCGCTTTTCTCTTTCGATTTGGGACTAGTCTCCATAGAGTCTTAGTCCCCCGAATTAAATGAAAATCTCTGACATATATCATTAATTTGACAACTACGCTCAAAGTAATATGTCATTAATTATTTTATTTTATTTTAAATTAAATAGCTTAAATTCTTAGAATATTACTGTTGAGCAGATTCAGGCAATATGGACTGTGGGAGAGATATGCAGAATTATATCCTGATACAGACTTAGTATATACCGTTGGAGTTAGTGATTACACAAAAGATTGGTTCTTCGCTCATGTTAATCGGTAAGTTCCAATATAATGCTAATATGTCAATTAAAATATACCAAATTTATTAGGTTTTTAATTAATTATATTTAAATTAATTGCAGGACCAGAAATGATGGGTCCCATTTACCAACCACGTGGCAAATCAAGTTTACACTCGATAACAACATAGATAAGAGCGGTATCTATAAATTGCGAGTGGCTTTGGCCACCGCCAATGTTGCTGAATTACAGGTACTCATTCTATTATATTGTTAACTTTATGAGACATTTGGTGATATAAGATTTTAAGCATTTTAGATCCAACGATTAGCTGTGTTGGATGATGAAAGTCTTGCATCGGCTCAATTAGGGGATGATTATAAGTTTATAATTAAGGAACACTCTCTCCATTAGTATTAGGCTTTTTGGGGAAGTCCAAAGTAAAGCCATGAGAGCTTATGCTCAANGATGATTATAAGTTTATAATTAAGGAACACTCTCTCCATTAGTATGAGGCCTTTTGGGGAAGTCCAAAGTAAAGCCATGAGAGCTTATGCTCAAAGTGGGCAATATCATACCATTGTGGAGGGTCGTGTTCGTCTAACATGGTATCAGAGCCTTGCCCTAAACTTAGTCGTGCCAATAAAATGATAAATAATTTAGGGAACGATCATGGTTTTTTTTTTTTTTTTTTTTTTTTTNTCATCATTTACTTACGATGTGATATTAATTTTTCTTTTCAAATAAAAATAGATTCGGGTGAACAATCCAGAAGTAGAGTCGGCTCTATTTACGACAGGACAAATTGGGCACGATAATGCAATTGCAAGACATGGAATTCATGGACTCTATCGACTCTATAGTGTCGACATATCGGGATCTGTACTGGTGGAAGGAGAGAACACCATCTTGCTTTCACAAATTATAAACAATTCATCTTTCAACGGCGTCATGTACGATTATATCCGCCTCGAAGGCCCCCCATCCGACGTCTCTACACATCCATAAAATATATGTTTTTTTCTTTTTTTATTTCAAAATTTATAATTATAGTCTTAGTCTTGTAACTCTATGAAACTTGAGCCAATAATGTTGTCAACTAAAAGTTTGTCAGAGATTTAATTACCGAGTCAATTTTTAACCGTTTAGAATAAATTTTAACGGTGTCAATGTGAAAATATAATTTTTCACCATTA

mRNA sequence

ATGGCGATAGCAGATAACAGAAAGAGATGGATGCCACTCCCTGAGGATAGAGTAGGCCGCAGAGGCAAAACCTTGGATTTTCCTGAAGCTGTATTACTAGTCCATCCTAGAGAAGCTGCGTTCAAGGGAGAGGTGGACGATAAGTACCAATATTCTTGTGAAAATAAGGATCTTAAAGTGCATGGATGGATATCCATGGATCCTTCCGACGACCCTCCGATGTTTCTTAGCGCTCACTATGGAGGAGAGGAGTTGGTGCTGAAGCTGAATCCTGATGAGCCGTGGAAGAAAGTGTTTGGGCCTGTCTTTTTCTATCTTAATTCTGTTCCTAATGGAACTGATCCACTTTCTTTGTGGGAAGATGCTAAAATTCAGCAAGAGCAAATGCCGGCAGCTGAGGCATATGTGGGACTGGCAGCGCCGGGAGACGCTGGATCATGGCAGACCGAAACCAAGGGCTACCAATTTTGGACCAAAACAGATGCATATGGCTCGTTTAGCATCGAAAATGTACGCATCGGCGACTACAATCTTTATGCTTGGGTTCCTGGCTTCATTGGTGACTACCGTTACGACGTTGTCATTAGCGTCTCTGCAGGTAGTGATATGGACGTGGGGGATTTTGTTTTTGAGCCGCCTAGGAATGGTCCAACGCTATGGGAAATAGGCATTCCTGATCGCTCTGCAGCTGAATTCTATATTCCTGATCCTAACCCAAATTACATTAACAAATTATACGTCGACCATCCAGATAGATTCAGGCAATATGGACTGTGGGAGAGATATGCAGAATTATATCCTGATACAGACTTAGTATATACCGTTGGAGTTAGTGATTACACAAAAGATTGGTTCTTCGCTCATGTTAATCGGACCAGAAATGATGGGTCCCATTTACCAACCACGTGGCAAATCAAGTTTACACTCGATAACAACATAGATAAGAGCGGTATCTATAAATTGCGAGTGGCTTTGGCCACCGCCAATGTTGCTGAATTACAGATTCGGGTGAACAATCCAGAAGTAGAGTCGGCTCTATTTACGACAGGACAAATTGGGCACGATAATGCAATTGCAAGACATGGAATTCATGGACTCTATCGACTCTATAGTGTCGACATATCGGGATCTGTACTGGTGGAAGGAGAGAACACCATCTTGCTTTCACAAATTATAAACAATTCATCTTTCAACGGCGTCATGTACGATTATATCCGCCTCGAAGGCCCCCCATCCGACGTCTCTACACATCCATAAAATATATGTTTTTTTCTTTTTTTATTTCAAAATTTATAATTATAGTCTTAGTCTTGTAACTCTATGAAACTTGAGCCAATAATGTTGTCAACTAAAAGTTTGTCAGAGATTTAATTACCGAGTCAATTTTTAACCGTTTAGAATAAATTTTAACGGTGTCAATGTGAAAATATAATTTTTCACCATTA

Coding sequence (CDS)

ATGGCGATAGCAGATAACAGAAAGAGATGGATGCCACTCCCTGAGGATAGAGTAGGCCGCAGAGGCAAAACCTTGGATTTTCCTGAAGCTGTATTACTAGTCCATCCTAGAGAAGCTGCGTTCAAGGGAGAGGTGGACGATAAGTACCAATATTCTTGTGAAAATAAGGATCTTAAAGTGCATGGATGGATATCCATGGATCCTTCCGACGACCCTCCGATGTTTCTTAGCGCTCACTATGGAGGAGAGGAGTTGGTGCTGAAGCTGAATCCTGATGAGCCGTGGAAGAAAGTGTTTGGGCCTGTCTTTTTCTATCTTAATTCTGTTCCTAATGGAACTGATCCACTTTCTTTGTGGGAAGATGCTAAAATTCAGCAAGAGCAAATGCCGGCAGCTGAGGCATATGTGGGACTGGCAGCGCCGGGAGACGCTGGATCATGGCAGACCGAAACCAAGGGCTACCAATTTTGGACCAAAACAGATGCATATGGCTCGTTTAGCATCGAAAATGTACGCATCGGCGACTACAATCTTTATGCTTGGGTTCCTGGCTTCATTGGTGACTACCGTTACGACGTTGTCATTAGCGTCTCTGCAGGTAGTGATATGGACGTGGGGGATTTTGTTTTTGAGCCGCCTAGGAATGGTCCAACGCTATGGGAAATAGGCATTCCTGATCGCTCTGCAGCTGAATTCTATATTCCTGATCCTAACCCAAATTACATTAACAAATTATACGTCGACCATCCAGATAGATTCAGGCAATATGGACTGTGGGAGAGATATGCAGAATTATATCCTGATACAGACTTAGTATATACCGTTGGAGTTAGTGATTACACAAAAGATTGGTTCTTCGCTCATGTTAATCGGACCAGAAATGATGGGTCCCATTTACCAACCACGTGGCAAATCAAGTTTACACTCGATAACAACATAGATAAGAGCGGTATCTATAAATTGCGAGTGGCTTTGGCCACCGCCAATGTTGCTGAATTACAGATTCGGGTGAACAATCCAGAAGTAGAGTCGGCTCTATTTACGACAGGACAAATTGGGCACGATAATGCAATTGCAAGACATGGAATTCATGGACTCTATCGACTCTATAGTGTCGACATATCGGGATCTGTACTGGTGGAAGGAGAGAACACCATCTTGCTTTCACAAATTATAAACAATTCATCTTTCAACGGCGTCATGTACGATTATATCCGCCTCGAAGGCCCCCCATCCGACGTCTCTACACATCCATAA

Protein sequence

MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKVHGWISMDPSDDPPMFLSAHYGGEELVLKLNPDEPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDNAIARHGIHGLYRLYSVDISGSVLVEGENTILLSQIINNSSFNGVMYDYIRLEGPPSDVSTHP
Homology
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BLAST of Cp4.1LG06g04070 vs. Swiss-Prot
Match: RHIE_DICD3 (Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-12
Identity = 89/365 (24.38%), Postives = 141/365 (38.63%), Query Frame = 1 

Query: 78  AHYGGEELVLKLNPDEPWKKVFGPVFFYLNSVPNGTD------------------PLSLW 137
           +H+G  ++V +      ++K++GP   Y+N    G D                  P    
Sbjct: 261 SHFGTPDMVAQPG----FEKLYGPWLLYINQ---GNDRELVADVSRRAEHERASWPYRWL 320

Query: 138 EDAKIQQEQMPAA-----EA-YVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 197
           +DA+  +++   +     EA +  +     A ++  +T GY F  +T+  G FS+ NV  
Sbjct: 321 DDARYPRQRATVSGRLRTEAPHATVVLNSSAENFDIQTTGYLFSARTNRDGRFSLSNVPP 380

Query: 198 GDYNLYAWVPG--FIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAE 257
           G+Y L A+  G   IG      V     G    +G      P   P  W IG  DR A E
Sbjct: 381 GEYRLSAYADGGTQIGLLAQQTV--RVEGKKTRLGQIDARQP--APLAWAIGQADRRADE 440

Query: 258 FYIPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNR 317
           F             + D P ++R    W+         DL + +G S   KDW++A    
Sbjct: 441 F------------RFGDKPRQYR----WQTEV----PADLTFEIGKSRERKDWYYAQTQ- 500

Query: 318 TRNDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPE----VESALF 377
                   P +W I F   N       Y L +A+A A+   +    ++P+    +   L 
Sbjct: 501 --------PGSWHILF---NTRTPEQPYTLNIAIAAASNNGMTTPASSPQLAVKLNGQLL 560

Query: 378 TTGQIGHDNAIARHGIH-GLYRLYSVDISGSVLVEGENTILLSQIINNSSFNGVMYDYIR 412
           TT +  +D +I R  +  G Y    + +    L +G N I L  +        VMYD I 
Sbjct: 561 TTLKYDNDKSIYRGAMQSGRYHEAHIPLPAGALQQGGNRITLELL-----GGMVMYDAIT 577

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BLAST of Cp4.1LG06g04070 vs. Swiss-Prot
Match: RGLB_ASPFN (Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rglB PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-11
Identity = 56/203 (27.59%), Postives = 95/203 (46.80%), Query Frame = 1 

Query: 150 ETKGYQFWTKTDAYGSFSIENVRIGDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFV 209
           E   +Q+W +    G+F +++V+ G Y L  +  G  GD+ +D V  V AG    V +  
Sbjct: 380 EASSHQYWAEMGQDGTFQLDHVKEGKYRLTVFADGIFGDFVHDGV-EVQAGKVTKVQE-T 439

Query: 210 FEPPRNGPTLWEIGIPDRSAAEFYIPD-PNPNYINKLYVDHPDRFRQYGLWERYAELYPD 269
           +E    G  +W +G PD+S+ EF   D P+P +     +  P  F  +G ++ + + +P+
Sbjct: 440 WEQESAGVEVWRLGTPDKSSGEFLHGDAPDPTH----PLHPPQHFIYWGAYD-WQQDFPN 499

Query: 270 TDLVYTVGVSDYTKDWFFAHVN----RTRNDGSHLPTT--WQIKFTLDNNIDKSGIYKLR 329
             + YT+G SD   D+   H +       N      TT  W I F+L    DK  + + +
Sbjct: 500 -GVNYTIGSSDPAVDFNTVHWSVYGPTPANPDVEYDTTHDWTINFSL----DKKQLQQRK 559

Query: 330 VALATANVAELQIRVNNPEVESA 346
            A  T  +A  +    N +V +A
Sbjct: 560 TATLTIQLAGAKTAAGNTDVYNA 570

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BLAST of Cp4.1LG06g04070 vs. Swiss-Prot
Match: RGLB_NEOFI (Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rglB PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.5e-10
Identity = 77/289 (26.64%), Postives = 113/289 (39.10%), Query Frame = 1 

Query: 154 YQFWTKTDAYGSFSIENVRIGDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPP 213
           YQ+WT  D  G F I+ V  G Y L  +  G  GD+  D V +V AG    V +  ++  
Sbjct: 379 YQYWTDIDTSGKFRIDRVVEGKYRLTVYADGIFGDFVRDGV-TVKAGKTTTVKE-KWDAE 438

Query: 214 RNGPTLWEIGIPDRSAAEF---YIPDPNPNYINKLYVDHPDRFRQY-GLWERYAELYPDT 273
             G  +W +G PD+S+ EF      DP        +  HP  +  Y G ++  ++L    
Sbjct: 439 SAGKEVWRLGTPDKSSGEFRHGVARDPT-------HPLHPPEYLIYWGAYDWQSDLPKGI 498

Query: 274 DLVYTVGVSDYTKDWFFAHVN----RTRNDGSHLPTT--WQIKFTL-DNNIDKSGIYKLR 333
           D  Y +G SD   D+   H +       N      TT  W+I F+L    +  S    L 
Sbjct: 499 D--YRIGSSDPATDFNTVHWSVFGPTPDNPDVEYNTTHDWKINFSLTKKQLRNSKKATLT 558

Query: 334 VALATA----------NVAELQIRVN-----NPEVESALFTTGQIGHDNAIARHGIHGLY 393
           + LA A          N +E  I ++     N + E   F  G     + I R  +    
Sbjct: 559 IQLAGAKTASGNTDVYNASEPYINLSHESYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQ 618

Query: 394 RLYSVDISGSVLVEGENTILLSQIINNSSFNG--------VMYDYIRLE 409
               ++     L  GENT+ L    N +            V YD +RLE
Sbjct: 619 VRSRMEFPADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656

[Close]
BLAST of Cp4.1LG06g04070 vs. Swiss-Prot
Match: RGLB_EMENI (Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglB PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 9.5e-10
Identity = 76/291 (26.12%), Postives = 114/291 (39.18%), Query Frame = 1 

Query: 154 YQFWTKTDAYGSFSIENVRIGDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPP 213
           +Q+W   D  G FSI+ V  G Y L  +  G  GD+  D ++ V A     + +  ++P 
Sbjct: 381 HQYWADIDKNGRFSIDRVVAGKYRLTVYADGIFGDFTRDGIV-VKARKSTSIKE-TWKPE 440

Query: 214 RNGPTLWEIGIPDRSAAEF---YIPDPNPNYINKLYVDHPDRFRQY-GLWERYAELYPDT 273
             G  +W +G PD+S+ EF      DP        +  HP  +  Y G ++  ++     
Sbjct: 441 SAGTEIWRLGTPDKSSGEFRHGAARDPT-------HPRHPPEYLIYWGAYDWQSDFPGGI 500

Query: 274 DLVYTVGVSDYTKDWFFAH--VNRTRNDG----SHLPTTWQIKFTLD-NNIDKSGIYKLR 333
           D  Y +G SD   D+   H  V     D     S+    W+I+F L    +       L 
Sbjct: 501 D--YMIGESDPATDFNTVHWAVFGPTPDNPVAESNTTHDWRIRFDLSAKQLHARKTATLT 560

Query: 334 VALATANV--------------AELQIRVNNPEVESALFTTGQIGHD---NAIARHGIHG 393
           + LA A                A L +R    E E  L  T  IG+D   + I R  +  
Sbjct: 561 IQLAGAKAASGNTDVYNASEPYANLPLRSYINEQEEPL--TMVIGYDQSSSCIVRSAVSC 620

Query: 394 LYRLYSVDISGSVLVEGENTILLSQIINNSSFNG--------VMYDYIRLE 409
                  +   S L EG N + LS   N +++          V YD +RLE
Sbjct: 621 YQVREKWEFPASWLKEGSNLLRLSLPTNGTNYESAVLPTSVYVQYDALRLE 658

[Close]
BLAST of Cp4.1LG06g04070 vs. Swiss-Prot
Match: RGLB_ASPFC (Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglB PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-09
Identity = 75/289 (25.95%), Postives = 109/289 (37.72%), Query Frame = 1 

Query: 154 YQFWTKTDAYGSFSIENVRIGDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPP 213
           YQ+WT  D  G F I+ V  G Y L  +  G  GD+  D V +V AG    V +  ++  
Sbjct: 379 YQYWTDIDTSGRFRIDRVVEGKYRLTVYADGIFGDFVRDGV-TVRAGKTTTVKE-KWDAE 438

Query: 214 RNGPTLWEIGIPDRSAAEF---YIPDPNPNYINKLYVDHPDRFRQY-GLWERYAELYPDT 273
             G  +W +G PD+S+ EF      DP        +  HP  +  Y G ++  ++     
Sbjct: 439 SAGKEIWRLGTPDKSSGEFRHGVARDPT-------HPLHPPEYLIYWGAYDWQSDFPKGI 498

Query: 274 DLVYTVGVSDYTKDWFFAHVN----RTRNDGSHLPTT--WQIKFTL-DNNIDKSGIYKLR 333
           D  YT+G SD   D+   H +       N      TT  W+I F+L    +  S    L 
Sbjct: 499 D--YTIGSSDPATDFNTVHWSVFGPTPDNPNVEYNTTHDWKINFSLTKKQLRNSKKATLT 558

Query: 334 VALATANVAE---------------LQIRVNNPEVESALFTTGQIGHDNAIARHGIHGLY 393
           + LA A  A                +     N + E   F  G     + I R  +    
Sbjct: 559 IQLAGAKTASGNTDEYKASEPYINLIHESYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQ 618

Query: 394 RLYSVDISGSVLVEGENTILLSQIINNSSFNG--------VMYDYIRLE 409
               ++     L  GENT+ L    N +            V YD +RLE
Sbjct: 619 VRSRMEFPADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656

[Close]
BLAST of Cp4.1LG06g04070 vs. TrEMBL
Match: A0A0A0LGY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G892750 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 1.4e-201
Identity = 350/481 (72.77%), Postives = 380/481 (79.00%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MAIAD+R+R+MPLPEDR+  RGK LDFPEAVLLV+P+E  FKGEVDDKYQYSCENKDLKV
Sbjct: 156 MAIADDRQRFMPLPEDRLRHRGKPLDFPEAVLLVNPKEPEFKGEVDDKYQYSCENKDLKV 215

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWISMDP              S  P               MFLSAHY GE+LVLK++PD
Sbjct: 216 HGWISMDPPVGFWQITPSSEFRSGGPLKQNLTSHVGPYALAMFLSAHYSGEDLVLKVSPD 275

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQEQ--------MPAAE----------- 180
           EPWKKVFGPVFFYLNSV +G DPLSLWEDAK Q  +         PA+E           
Sbjct: 276 EPWKKVFGPVFFYLNSVSDGGDPLSLWEDAKTQMSKEVQSWPYSFPASEDFPPPNQRGRL 335

Query: 181 --------------------AYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                               AYVGLAAPGD GSWQTE KGYQFWTKTDA GSFSIE+VRI
Sbjct: 336 TGKLFVLDRYVNEEKMPATDAYVGLAAPGDVGSWQTEKKGYQFWTKTDADGSFSIEHVRI 395

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYNLYAWVPGFIGDYRYDV+I+VS+GSDMDVGD V+EPPRNGPTLWEIGIPDRSAAEFY
Sbjct: 396 GDYNLYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFY 455

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           IPDP+P YINKLY++HPDRFRQYGLWE+YAEL+PD DLVY+VGVSDYTKDWFFAHVNR R
Sbjct: 456 IPDPDPKYINKLYINHPDRFRQYGLWEKYAELHPDADLVYSVGVSDYTKDWFFAHVNRKR 515

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 415
           NDGSHL TTW+IKF LDN IDK   Y LRVALATANVAELQI+VNNPE + +LFTTG IG
Sbjct: 516 NDGSHLATTWEIKFRLDNIIDKGVSYTLRVALATANVAELQIQVNNPEAKPSLFTTGVIG 575

[Close]
BLAST of Cp4.1LG06g04070 vs. TrEMBL
Match: B9GN78_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s11090g PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 1.1e-171
Identity = 295/475 (62.11%), Postives = 344/475 (72.42%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           M +ADNR+R+MPLP+DR   RG+ LDFPEAVLLV P E  FKGEVDDKYQYSCENKDL V
Sbjct: 159 MVVADNRQRFMPLPDDRQPERGEPLDFPEAVLLVDPVEPEFKGEVDDKYQYSCENKDLHV 218

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGW+  DP              S  P               MFLSAHY GE+LVLKLNP 
Sbjct: 219 HGWMCFDPPTGFWQITPSSEFRSGGPLKQNLTSHVGPYTLAMFLSAHYAGEDLVLKLNPG 278

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAK----------------------------- 180
           EPWKKVFGPVF YLNSV +  + LSLW+DAK                             
Sbjct: 279 EPWKKVFGPVFMYLNSVMDKDNALSLWDDAKEQEVHCWPYSFPASEDFPCSDQRGKISGR 338

Query: 181 -------IQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDY 240
                  I  E + A +AYVGLA PGD GSWQ E KGYQFWTKTD  GSF I ++R GDY
Sbjct: 339 LQVLDRYISHECIAANDAYVGLAPPGDVGSWQRECKGYQFWTKTDGDGSFCIGDIRTGDY 398

Query: 241 NLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPD 300
           NLYAW+PGFIGDYR D VI+V+AG ++DVGD V+EPPR+GPT+WEIGIPDRSAAEFYIPD
Sbjct: 399 NLYAWIPGFIGDYRNDTVITVTAGCEIDVGDLVYEPPRDGPTVWEIGIPDRSAAEFYIPD 458

Query: 301 PNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDG 360
           PNP YINKL+++HPDRFRQYGLWERYA+LYPD DLVY VG SDY KDWFFA VNR ++DG
Sbjct: 459 PNPKYINKLFINHPDRFRQYGLWERYADLYPDGDLVYKVGHSDYKKDWFFAQVNRKKDDG 518

Query: 361 SHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDN 412
           +   TTWQI+F LD N+D+SG +KLR+ALATANVAELQ+R+N+P+++   F+TG+IGHDN
Sbjct: 519 TLEGTTWQIRFKLD-NVDQSGAFKLRLALATANVAELQVRINDPKIDPPHFSTGEIGHDN 578

[Close]
BLAST of Cp4.1LG06g04070 vs. TrEMBL
Match: A0A0B2PMT1_GLYSO (Rhamnogalacturonate lyase OS=Glycine soja GN=glysoja_021846 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 8.8e-164
Identity = 284/479 (59.29%), Postives = 336/479 (70.15%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MA+ADNR+R MPLP+DR+  +GK L +PEAVLLV+P E   KGEVDDKYQYSC+NKD +V
Sbjct: 143 MAMADNRQRNMPLPDDRLPPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQV 202

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWI MDP              S  P               +FLSAHY GE+LV K N  
Sbjct: 203 HGWICMDPAVGFWLITPSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSG 262

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQ-------------------------- 180
           E WKKVFGPVF YLNS  +GTDPL LWEDAK+Q                           
Sbjct: 263 EAWKKVFGPVFIYLNSPYDGTDPLKLWEDAKLQMSVEVQSWPYSFPESEDFAKWDDRGNV 322

Query: 181 -------------EQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                        + + A  AYVGLA PGD GSWQ E K YQFW + D  G FS+ N+R 
Sbjct: 323 SGRLLVRERYINDDYVSAKGAYVGLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRA 382

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYN+YAWVPGFIGDY+YDVVI+++ G D+D+GD V+EPPR+GPTLWEIGIPDRSAAEFY
Sbjct: 383 GDYNVYAWVPGFIGDYKYDVVINITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFY 442

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           +PDPNP YINKLYV+HPD+FRQYGLWERYAELYPD DL+YT+GVSDYTKDWFFA V R +
Sbjct: 443 VPDPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKK 502

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 413
           +D ++  TTWQIKF LD +++KS  YKLRVALA+A ++ELQ+RVNNP+    LF++G IG
Sbjct: 503 DDNTYQGTTWQIKFKLD-SVNKSSSYKLRVALASATLSELQVRVNNPKAPRPLFSSGLIG 562

[Close]
BLAST of Cp4.1LG06g04070 vs. TrEMBL
Match: I1K9M3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G092900 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 8.8e-164
Identity = 284/479 (59.29%), Postives = 336/479 (70.15%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MA+ADNR+R MPLP+DR+  +GK L +PEAVLLV+P E   KGEVDDKYQYSC+NKD +V
Sbjct: 159 MAMADNRQRNMPLPDDRLPPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQV 218

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWI MDP              S  P               +FLSAHY GE+LV K N  
Sbjct: 219 HGWICMDPAVGFWLITPSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSG 278

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQ-------------------------- 180
           E WKKVFGPVF YLNS  +GTDPL LWEDAK+Q                           
Sbjct: 279 EAWKKVFGPVFIYLNSPYDGTDPLKLWEDAKLQMSVEVQSWPYSFPESEDFAKWDDRGNV 338

Query: 181 -------------EQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                        + + A  AYVGLA PGD GSWQ E K YQFW + D  G FS+ N+R 
Sbjct: 339 SGRLLVRERYINDDYVSAKGAYVGLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRA 398

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYN+YAWVPGFIGDY+YDVVI+++ G D+D+GD V+EPPR+GPTLWEIGIPDRSAAEFY
Sbjct: 399 GDYNVYAWVPGFIGDYKYDVVINITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFY 458

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           +PDPNP YINKLYV+HPD+FRQYGLWERYAELYPD DL+YT+GVSDYTKDWFFA V R +
Sbjct: 459 VPDPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKK 518

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 413
           +D ++  TTWQIKF LD +++KS  YKLRVALA+A ++ELQ+RVNNP+    LF++G IG
Sbjct: 519 DDNTYQGTTWQIKFKLD-SVNKSSSYKLRVALASATLSELQVRVNNPKAPRPLFSSGLIG 578

[Close]
BLAST of Cp4.1LG06g04070 vs. TrEMBL
Match: A0A087GGI7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G074100 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 2.0e-160
Identity = 281/477 (58.91%), Postives = 342/477 (71.70%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           M IADNR+R MPLPEDR+G+RG+ L +PEAVLLVHP E  FKGEVDDKYQYSCENKDLKV
Sbjct: 160 MVIADNRQRKMPLPEDRLGKRGRALAYPEAVLLVHPVEKEFKGEVDDKYQYSCENKDLKV 219

Query: 61  HGWIS---------MDPSDD-------------------PPMFLSAHYGGEELVLKLNPD 120
           HGWIS         + PS++                     MFLSAHY GE++V+K+   
Sbjct: 220 HGWISHKPGLGFWQITPSNEFRSGGLYKQNLTSHVGPISLAMFLSAHYVGEDMVMKVKSG 279

Query: 121 EPWKKVFGPVFFYLNSVPNGT-DPLSLWEDAKIQ-------------------------- 180
           E WKKVFGPVF YLNS+P+ T DPLSLW+DAK Q                          
Sbjct: 280 ESWKKVFGPVFTYLNSLPDQTSDPLSLWQDAKNQMLVEVQSWPYDFPASEDFAVSTKRGY 339

Query: 181 ----------QEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGD 240
                      E +PA  A+VGLA PG+ GSWQTE+KGYQFWT+ DA G F+I N+R G+
Sbjct: 340 ISGRLLVRDNDELLPANGAFVGLAPPGEVGSWQTESKGYQFWTEADADGYFAINNIREGE 399

Query: 241 YNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIP 300
           Y+L A+V G+IGDY+Y+  I+++AG D+DVG+ V++PPR+GPT+WEIGIPDRSAAEF++P
Sbjct: 400 YDLNAYVSGWIGDYQYEQTINITAGCDIDVGNVVYQPPRDGPTVWEIGIPDRSAAEFFVP 459

Query: 301 DPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRND 360
           DPNP YINKLY+ HPD+FRQYGLWERY ELYP  DLV+T+GVSDY KDWFFAHV R   D
Sbjct: 460 DPNPKYINKLYIGHPDKFRQYGLWERYTELYPKEDLVFTIGVSDYRKDWFFAHVTRKTGD 519

Query: 361 GSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHD 412
             +  TTWQIKF L+  + KS IYK+R+ALATANVAELQ+RVN  + +  LFTTG IGHD
Sbjct: 520 DKYQETTWQIKFKLE-TVQKSSIYKIRIALATANVAELQVRVNEYQ-QVPLFTTGVIGHD 579

[Close]
BLAST of Cp4.1LG06g04070 vs. TAIR10
Match: AT4G24430.1 (AT4G24430.1 Rhamnogalacturonate lyase family protein)

HSP 1 Score: 418.7 bits (1075), Expect = 4.2e-117
Identity = 190/300 (63.33%), Postives = 243/300 (81.00%), Query Frame = 1 

Query: 121 DAKIQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDYNLYA 180
           D  +  + +PA  A+VGLA PG+ GSWQ E+KGYQFWT+ D+ G F+I ++R G+YNL  
Sbjct: 348 DKFLSDDFLPANGAFVGLAPPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNG 407

Query: 181 WVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPDPNPN 240
           +V G+IGDY+Y+ +I+++AG D+DVG+ V+EPPR+GPT+WEIGIPDRSAAEF++PDPNP 
Sbjct: 408 YVTGWIGDYQYEQLINITAGCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPK 467

Query: 241 YINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDGSHLP 300
           YINKLY+ HPDRFRQYGLWERY ELYP  DLV+T+GVSDY KDWFFAHV R   D ++  
Sbjct: 468 YINKLYIGHPDRFRQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQK 527

Query: 301 TTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVE--SALFTTGQIGHDNAI 360
           TTWQIKF L+ N+ KS  YK+R+ALATANVAELQ+R+N+ + E  + +FTTG IGHDNAI
Sbjct: 528 TTWQIKFKLE-NVQKSCTYKIRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAI 587

Query: 361 ARHGIHGLYRLYSVDISGSVLVEGENTILLSQIINNS-SFNGVMYDYIRLEGPPSDVSTH 418
           ARHGIHG+YRLY+VD+    LVEG+NT+ L+Q +  + +FNG+MYDYIRLEGPP D  +H
Sbjct: 588 ARHGIHGIYRLYNVDVPSEKLVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGPPLDSYSH 646

[Close]
BLAST of Cp4.1LG06g04070 vs. TAIR10
Match: AT1G09890.1 (AT1G09890.1 Rhamnogalacturonate lyase family protein)

HSP 1 Score: 392.1 bits (1006), Expect = 4.2e-109
Identity = 184/293 (62.80%), Postives = 225/293 (76.79%), Query Frame = 1 

Query: 118 LWEDAKIQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDYN 177
           L +D  + ++ + A   YVGLA PG AGSWQ E K YQFWT+TD  G F I  +R G YN
Sbjct: 326 LVQDRYVDKDFIAANRGYVGLAVPGAAGSWQRECKEYQFWTRTDEEGFFYISGIRPGQYN 385

Query: 178 LYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPDP 237
           LYAW+PGFIGDY+YD VI++++G  + V D V++PPRNG TLWEIG PDRSAAEFY+PDP
Sbjct: 386 LYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQPPRNGATLWEIGFPDRSAAEFYVPDP 445

Query: 238 NPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDGS 297
           NP YIN LY +HPDRFRQYGLWERYAELYPD DLVY VG SDY KDWF+A V R +++ +
Sbjct: 446 NPKYINNLYQNHPDRFRQYGLWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRKKDNKT 505

Query: 298 HLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDNA 357
           +  TTWQIKF L  NIDK+  Y LRVA+A+A  +ELQIRVNN    S +FT+G IG DN+
Sbjct: 506 YQGTTWQIKFEL-KNIDKNHSYTLRVAIASATFSELQIRVNNANA-SPMFTSGLIGRDNS 565

Query: 358 IARHGIHGLYRLYSVDISGSVLVEGENTILLSQIINNSSFNGVMYDYIRLEGP 411
           IARHGIHGLY L++V+++GS L+EGENT+ L+Q  + S F G+MYDYIR E P
Sbjct: 566 IARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRSTSPFQGIMYDYIRFEAP 616

[Close]
BLAST of Cp4.1LG06g04070 vs. TAIR10
Match: AT2G22620.1 (AT2G22620.1 Rhamnogalacturonate lyase family protein)

HSP 1 Score: 392.1 bits (1006), Expect = 4.2e-109
Identity = 224/480 (46.67%), Postives = 279/480 (58.13%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MAI+D+R+R MP   DR     K+L + EAVLL +P    FKGEVDDKY YS E+KD  V
Sbjct: 201 MAISDDRQRSMPSMADR--ENSKSLAYKEAVLLTNPSNPMFKGEVDDKYMYSMEDKDNNV 260

Query: 61  HGWISMDP---------SDD-------------------PPMFLSAHYGGEELVLKLNPD 120
           HGWIS DP         SD+                     MF S HY G+E+ +     
Sbjct: 261 HGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNG 320

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQEQMPAAEAYVGLAAPGDAGSWQTETK 180
           EPWKKVFGPV  YLNSV      L LW DAK Q      +  Y  + +       Q  T 
Sbjct: 321 EPWKKVFGPVLAYLNSVSPKDSTLRLWRDAKRQMAAEVKSWPYDFITSEDYPLRHQRGTL 380

Query: 181 GYQFWTKTD------AYGSFSIENVR-IGDYNLYAWVPGFIG-------DYRYDVVI--- 240
             QF  K         YG F+   +  IG+    +W     G       D R   +I   
Sbjct: 381 EGQFLIKDSYVSRLKIYGKFAFVGLAPIGEAG--SWQTESKGYQFWTKADRRGRFIIENV 440

Query: 241 ------------------------SVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAE 300
                                   +++ GS+M+VG  V+EPPRNGPTLWEIG+PDR+A E
Sbjct: 441 RAGNYSLYAWGSGFIGDYKYEQNITITPGSEMNVGPLVYEPPRNGPTLWEIGVPDRTAGE 500

Query: 301 FYIPDPNPNYINKLYVDH-PDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVN 360
           FYIPDP P  +NKLYV+   DRFRQYGLW+RYA+LYP  DLVYT+GVSDY  DWFFAHV 
Sbjct: 501 FYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQNDLVYTIGVSDYRSDWFFAHVA 560

Query: 361 RTRNDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTG 411
           R   + ++ PTTWQI F L  N+++ G Y LR+ALA+A  +ELQIR+N+P+   A+FTTG
Sbjct: 561 RNVGNDTYQPTTWQIIFNL-KNVNRIGRYTLRIALASAADSELQIRINDPK-SDAIFTTG 620

[Close]
BLAST of Cp4.1LG06g04070 vs. TAIR10
Match: AT1G09880.1 (AT1G09880.1 Rhamnogalacturonate lyase family protein)

HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-108
Identity = 182/296 (61.49%), Postives = 224/296 (75.68%), Query Frame = 1 

Query: 118 LWEDAKIQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDYN 177
           L  D  I  E +PA  +YVGLAAPGD GSWQ E KGYQFW+K D  GSFSI NVR G YN
Sbjct: 329 LVRDRFISSEDIPANGSYVGLAAPGDVGSWQRECKGYQFWSKADENGSFSINNVRSGRYN 388

Query: 178 LYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPDP 237
           LYA+ PGFIGDY  D V  +S GS + +GD V+EPPR+G TLWEIG+PDRSAAEFYIPDP
Sbjct: 389 LYAFAPGFIGDYHNDTVFDISPGSKISLGDLVYEPPRDGSTLWEIGVPDRSAAEFYIPDP 448

Query: 238 NPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDGS 297
           NP+++NKLY++H D++RQYGLWERY+ELYPD D+VY V + DY+K+WFF  V R + +G 
Sbjct: 449 NPSFVNKLYLNHSDKYRQYGLWERYSELYPDEDMVYNVDIDDYSKNWFFMQVTRKQANGG 508

Query: 298 HLPTTWQIKFTLDNNI-DKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDN 357
           +  TTWQI+F  D+ + + +G +KLR+ALAT+NVAELQ+RVN+   +  LF T QIG DN
Sbjct: 509 YKGTTWQIRFQFDDKMKNVTGNFKLRIALATSNVAELQVRVNDLSADPPLFRTEQIGRDN 568

Query: 358 AIARHGIHGLYRLYSVDISGSVLVEGENTILLSQIINNSSFNGVMYDYIRLEGPPS 413
            IARHGIHGLY LYSV++  + L  G NTI L+Q +  S F G+MYDYIRLE P S
Sbjct: 569 TIARHGIHGLYWLYSVNVPAASLHVGNNTIYLTQALATSPFQGLMYDYIRLEYPDS 624

[Close]
BLAST of Cp4.1LG06g04070 vs. TAIR10
Match: AT1G09910.1 (AT1G09910.1 Rhamnogalacturonate lyase family protein)

HSP 1 Score: 387.5 bits (994), Expect = 1.0e-107
Identity = 183/295 (62.03%), Postives = 224/295 (75.93%), Query Frame = 1 

Query: 118 LWEDAKIQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDYN 177
           L  D  I  + + A  AYVGLA PGD+GSWQ E KGYQFW   D  G FSI NVR G+YN
Sbjct: 383 LIRDRFINNDLISARGAYVGLAPPGDSGSWQIECKGYQFWAIADEAGYFSIGNVRPGEYN 442

Query: 178 LYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPDP 237
           LYAWVP FIGDY    ++ V++G  +++GD V+EPPR+GPTLWEIGIPDR A+EF+IPDP
Sbjct: 443 LYAWVPSFIGDYHNGTIVRVTSGCMIEMGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDP 502

Query: 238 NPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDGS 297
           +P  +N++ V H DRFRQYGLW++Y ++YP+ DLVYTVGVSDY +DWFFAHV R + D  
Sbjct: 503 DPTLVNRVLVHHQDRFRQYGLWKKYTDMYPNDDLVYTVGVSDYRRDWFFAHVPRKKGD-V 562

Query: 298 HLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDNA 357
           H  TTWQI F L+ NID+   YKLRVA+A+A +AELQIR+N+ E    LFTTG IG DN+
Sbjct: 563 HEGTTWQIIFNLE-NIDQKANYKLRVAIASATLAELQIRINDAEAIRPLFTTGLIGRDNS 622

Query: 358 IARHGIHGLYRLYSVDISGSVLVEGENTILLSQIINNSSFNGVMYDYIRLEGPPS 413
           IARHGIHG+Y LY+V+I G+ LV+G+NTI L Q   N  F G+MYDYIRLEGPPS
Sbjct: 623 IARHGIHGVYMLYAVNIPGNRLVQGDNTIFLKQPRCNGPFQGIMYDYIRLEGPPS 675

[Close]
BLAST of Cp4.1LG06g04070 vs. NCBI nr
Match: gi|659132325|ref|XP_008466141.1| (PREDICTED: rhamnogalacturonate lyase B [Cucumis melo])

HSP 1 Score: 717.2 bits (1850), Expect = 1.6e-203
Identity = 355/480 (73.96%), Postives = 380/480 (79.17%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MAIAD+R+R+MPLPEDR+  RGK LDFPEAVLLV+P+E  FKGEVDDKYQYSCENKDLKV
Sbjct: 156 MAIADDRQRFMPLPEDRLRHRGKPLDFPEAVLLVNPKEPEFKGEVDDKYQYSCENKDLKV 215

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWISMDP              S  P               MFLSAHY GE+LVLKL+PD
Sbjct: 216 HGWISMDPPVGFWQITPSSEFRSGGPLKQNLTSHVGPYALAMFLSAHYSGEDLVLKLSPD 275

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQE--------QMPAAE----------- 180
           EPWKKVFGPVFFYLNSV +G DPLSLWEDAK Q            PA+E           
Sbjct: 276 EPWKKVFGPVFFYLNSVSDGGDPLSLWEDAKTQMSIEVQSWPYSFPASEDFPPPNQRGRL 335

Query: 181 --------------------AYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                               AYVGLAAPG+AGSWQTE KGYQFWTKTDA GSFSIE+VRI
Sbjct: 336 TGKLFVLDRYINEEKMPATDAYVGLAAPGEAGSWQTENKGYQFWTKTDADGSFSIEHVRI 395

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYNLYAWVPGFIGDYRYDV+I+VS GSDMDVGD V+EPPRNGPTLWEIGIPDRSAAEFY
Sbjct: 396 GDYNLYAWVPGFIGDYRYDVLINVSPGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFY 455

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           IPDP+P YINKLYV+HPDRFRQYGLWERYAELYPD DLVY+VGVSDYTKDWFFAHVNR R
Sbjct: 456 IPDPDPKYINKLYVNHPDRFRQYGLWERYAELYPDADLVYSVGVSDYTKDWFFAHVNRKR 515

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 414
           NDGSHL TTW+IKF +DN IDKSG Y LRVALATANVAELQI+VNNPE + +LFTTG IG
Sbjct: 516 NDGSHLATTWEIKFRVDNIIDKSGTYTLRVALATANVAELQIQVNNPEAKPSLFTTGMIG 575

[Close]
BLAST of Cp4.1LG06g04070 vs. NCBI nr
Match: gi|449436942|ref|XP_004136251.1| (PREDICTED: probable rhamnogalacturonate lyase B [Cucumis sativus])

HSP 1 Score: 710.3 bits (1832), Expect = 2.0e-201
Identity = 350/481 (72.77%), Postives = 380/481 (79.00%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MAIAD+R+R+MPLPEDR+  RGK LDFPEAVLLV+P+E  FKGEVDDKYQYSCENKDLKV
Sbjct: 156 MAIADDRQRFMPLPEDRLRHRGKPLDFPEAVLLVNPKEPEFKGEVDDKYQYSCENKDLKV 215

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWISMDP              S  P               MFLSAHY GE+LVLK++PD
Sbjct: 216 HGWISMDPPVGFWQITPSSEFRSGGPLKQNLTSHVGPYALAMFLSAHYSGEDLVLKVSPD 275

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQEQ--------MPAAE----------- 180
           EPWKKVFGPVFFYLNSV +G DPLSLWEDAK Q  +         PA+E           
Sbjct: 276 EPWKKVFGPVFFYLNSVSDGGDPLSLWEDAKTQMSKEVQSWPYSFPASEDFPPPNQRGRL 335

Query: 181 --------------------AYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                               AYVGLAAPGD GSWQTE KGYQFWTKTDA GSFSIE+VRI
Sbjct: 336 TGKLFVLDRYVNEEKMPATDAYVGLAAPGDVGSWQTEKKGYQFWTKTDADGSFSIEHVRI 395

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYNLYAWVPGFIGDYRYDV+I+VS+GSDMDVGD V+EPPRNGPTLWEIGIPDRSAAEFY
Sbjct: 396 GDYNLYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFY 455

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           IPDP+P YINKLY++HPDRFRQYGLWE+YAEL+PD DLVY+VGVSDYTKDWFFAHVNR R
Sbjct: 456 IPDPDPKYINKLYINHPDRFRQYGLWEKYAELHPDADLVYSVGVSDYTKDWFFAHVNRKR 515

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 415
           NDGSHL TTW+IKF LDN IDK   Y LRVALATANVAELQI+VNNPE + +LFTTG IG
Sbjct: 516 NDGSHLATTWEIKFRLDNIIDKGVSYTLRVALATANVAELQIQVNNPEAKPSLFTTGVIG 575

[Close]
BLAST of Cp4.1LG06g04070 vs. NCBI nr
Match: gi|224063367|ref|XP_002301114.1| (hypothetical protein POPTR_0002s11090g [Populus trichocarpa])

HSP 1 Score: 610.9 bits (1574), Expect = 1.6e-171
Identity = 295/475 (62.11%), Postives = 344/475 (72.42%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           M +ADNR+R+MPLP+DR   RG+ LDFPEAVLLV P E  FKGEVDDKYQYSCENKDL V
Sbjct: 159 MVVADNRQRFMPLPDDRQPERGEPLDFPEAVLLVDPVEPEFKGEVDDKYQYSCENKDLHV 218

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGW+  DP              S  P               MFLSAHY GE+LVLKLNP 
Sbjct: 219 HGWMCFDPPTGFWQITPSSEFRSGGPLKQNLTSHVGPYTLAMFLSAHYAGEDLVLKLNPG 278

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAK----------------------------- 180
           EPWKKVFGPVF YLNSV +  + LSLW+DAK                             
Sbjct: 279 EPWKKVFGPVFMYLNSVMDKDNALSLWDDAKEQEVHCWPYSFPASEDFPCSDQRGKISGR 338

Query: 181 -------IQQEQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRIGDY 240
                  I  E + A +AYVGLA PGD GSWQ E KGYQFWTKTD  GSF I ++R GDY
Sbjct: 339 LQVLDRYISHECIAANDAYVGLAPPGDVGSWQRECKGYQFWTKTDGDGSFCIGDIRTGDY 398

Query: 241 NLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFYIPD 300
           NLYAW+PGFIGDYR D VI+V+AG ++DVGD V+EPPR+GPT+WEIGIPDRSAAEFYIPD
Sbjct: 399 NLYAWIPGFIGDYRNDTVITVTAGCEIDVGDLVYEPPRDGPTVWEIGIPDRSAAEFYIPD 458

Query: 301 PNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTRNDG 360
           PNP YINKL+++HPDRFRQYGLWERYA+LYPD DLVY VG SDY KDWFFA VNR ++DG
Sbjct: 459 PNPKYINKLFINHPDRFRQYGLWERYADLYPDGDLVYKVGHSDYKKDWFFAQVNRKKDDG 518

Query: 361 SHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIGHDN 412
           +   TTWQI+F LD N+D+SG +KLR+ALATANVAELQ+R+N+P+++   F+TG+IGHDN
Sbjct: 519 TLEGTTWQIRFKLD-NVDQSGAFKLRLALATANVAELQVRINDPKIDPPHFSTGEIGHDN 578

[Close]
BLAST of Cp4.1LG06g04070 vs. NCBI nr
Match: gi|734339609|gb|KHN09024.1| (Rhamnogalacturonate lyase [Glycine soja])

HSP 1 Score: 584.7 bits (1506), Expect = 1.3e-163
Identity = 284/479 (59.29%), Postives = 336/479 (70.15%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MA+ADNR+R MPLP+DR+  +GK L +PEAVLLV+P E   KGEVDDKYQYSC+NKD +V
Sbjct: 143 MAMADNRQRNMPLPDDRLPPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQV 202

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWI MDP              S  P               +FLSAHY GE+LV K N  
Sbjct: 203 HGWICMDPAVGFWLITPSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSG 262

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQ-------------------------- 180
           E WKKVFGPVF YLNS  +GTDPL LWEDAK+Q                           
Sbjct: 263 EAWKKVFGPVFIYLNSPYDGTDPLKLWEDAKLQMSVEVQSWPYSFPESEDFAKWDDRGNV 322

Query: 181 -------------EQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                        + + A  AYVGLA PGD GSWQ E K YQFW + D  G FS+ N+R 
Sbjct: 323 SGRLLVRERYINDDYVSAKGAYVGLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRA 382

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYN+YAWVPGFIGDY+YDVVI+++ G D+D+GD V+EPPR+GPTLWEIGIPDRSAAEFY
Sbjct: 383 GDYNVYAWVPGFIGDYKYDVVINITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFY 442

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           +PDPNP YINKLYV+HPD+FRQYGLWERYAELYPD DL+YT+GVSDYTKDWFFA V R +
Sbjct: 443 VPDPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKK 502

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 413
           +D ++  TTWQIKF LD +++KS  YKLRVALA+A ++ELQ+RVNNP+    LF++G IG
Sbjct: 503 DDNTYQGTTWQIKFKLD-SVNKSSSYKLRVALASATLSELQVRVNNPKAPRPLFSSGLIG 562

[Close]
BLAST of Cp4.1LG06g04070 vs. NCBI nr
Match: gi|356515685|ref|XP_003526529.1| (PREDICTED: probable rhamnogalacturonate lyase B [Glycine max])

HSP 1 Score: 584.7 bits (1506), Expect = 1.3e-163
Identity = 284/479 (59.29%), Postives = 336/479 (70.15%), Query Frame = 1 

Query: 1   MAIADNRKRWMPLPEDRVGRRGKTLDFPEAVLLVHPREAAFKGEVDDKYQYSCENKDLKV 60
           MA+ADNR+R MPLP+DR+  +GK L +PEAVLLV+P E   KGEVDDKYQYSC+NKD +V
Sbjct: 159 MAMADNRQRNMPLPDDRLPPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQV 218

Query: 61  HGWISMDP--------------SDDP--------------PMFLSAHYGGEELVLKLNPD 120
           HGWI MDP              S  P               +FLSAHY GE+LV K N  
Sbjct: 219 HGWICMDPAVGFWLITPSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSG 278

Query: 121 EPWKKVFGPVFFYLNSVPNGTDPLSLWEDAKIQQ-------------------------- 180
           E WKKVFGPVF YLNS  +GTDPL LWEDAK+Q                           
Sbjct: 279 EAWKKVFGPVFIYLNSPYDGTDPLKLWEDAKLQMSVEVQSWPYSFPESEDFAKWDDRGNV 338

Query: 181 -------------EQMPAAEAYVGLAAPGDAGSWQTETKGYQFWTKTDAYGSFSIENVRI 240
                        + + A  AYVGLA PGD GSWQ E K YQFW + D  G FS+ N+R 
Sbjct: 339 SGRLLVRERYINDDYVSAKGAYVGLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRA 398

Query: 241 GDYNLYAWVPGFIGDYRYDVVISVSAGSDMDVGDFVFEPPRNGPTLWEIGIPDRSAAEFY 300
           GDYN+YAWVPGFIGDY+YDVVI+++ G D+D+GD V+EPPR+GPTLWEIGIPDRSAAEFY
Sbjct: 399 GDYNVYAWVPGFIGDYKYDVVINITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFY 458

Query: 301 IPDPNPNYINKLYVDHPDRFRQYGLWERYAELYPDTDLVYTVGVSDYTKDWFFAHVNRTR 360
           +PDPNP YINKLYV+HPD+FRQYGLWERYAELYPD DL+YT+GVSDYTKDWFFA V R +
Sbjct: 459 VPDPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKK 518

Query: 361 NDGSHLPTTWQIKFTLDNNIDKSGIYKLRVALATANVAELQIRVNNPEVESALFTTGQIG 413
           +D ++  TTWQIKF LD +++KS  YKLRVALA+A ++ELQ+RVNNP+    LF++G IG
Sbjct: 519 DDNTYQGTTWQIKFKLD-SVNKSSSYKLRVALASATLSELQVRVNNPKAPRPLFSSGLIG 578

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g04070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHIE_DICD32.7e-1224.38Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE PE=1 SV=1[more]
RGLB_ASPFN1.7e-1127.59Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain ATCC 200026 /... [more]
RGLB_NEOFI9.5e-1026.64Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri (strain ATCC 1020 /... [more]
RGLB_EMENI9.5e-1026.12Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 ... [more]
RGLB_ASPFC2.1e-0925.95Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain CEA10 / CBS... [more]
BLAST of Cp4.1LG06g04070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGY0_CUCSA1.4e-20172.77Uncharacterized protein OS=Cucumis sativus GN=Csa_3G892750 PE=4 SV=1[more]
B9GN78_POPTR1.1e-17162.11Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s11090g PE=4 SV=1[more]
A0A0B2PMT1_GLYSO8.8e-16459.29Rhamnogalacturonate lyase OS=Glycine soja GN=glysoja_021846 PE=4 SV=1[more]
I1K9M3_SOYBN8.8e-16459.29Uncharacterized protein OS=Glycine max GN=GLYMA_06G092900 PE=4 SV=1[more]
A0A087GGI7_ARAAL2.0e-16058.91Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G074100 PE=4 SV=1[more]
BLAST of Cp4.1LG06g04070 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24430.14.2e-11763.33 Rhamnogalacturonate lyase family protein[more]
AT1G09890.14.2e-10962.80 Rhamnogalacturonate lyase family protein[more]
AT2G22620.14.2e-10946.67 Rhamnogalacturonate lyase family protein[more]
AT1G09880.11.2e-10861.49 Rhamnogalacturonate lyase family protein[more]
AT1G09910.11.0e-10762.03 Rhamnogalacturonate lyase family protein[more]
BLAST of Cp4.1LG06g04070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132325|ref|XP_008466141.1|1.6e-20373.96PREDICTED: rhamnogalacturonate lyase B [Cucumis melo][more]
gi|449436942|ref|XP_004136251.1|2.0e-20172.77PREDICTED: probable rhamnogalacturonate lyase B [Cucumis sativus][more]
gi|224063367|ref|XP_002301114.1|1.6e-17162.11hypothetical protein POPTR_0002s11090g [Populus trichocarpa][more]
gi|734339609|gb|KHN09024.1|1.3e-16359.29Rhamnogalacturonate lyase [Glycine soja][more]
gi|356515685|ref|XP_003526529.1|1.3e-16359.29PREDICTED: probable rhamnogalacturonate lyase B [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
Vocabulary: INTERPRO
TermDefinition
IPR014766Carboxypeptidase, regulatory domain
IPR013784Carb-bd-like_fold
IPR010325Rhamnogal_lyase
IPR008979Galactose-bd-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005672 transcription factor TFIIA complex
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g04070.1Cp4.1LG06g04070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding domain-likeGENE3DG3DSA:2.60.120.260coord: 215..408
score: 7.3
IPR008979Galactose-binding domain-likeunknownSSF49785Galactose-binding domain-likecoord: 215..408
score: 1.45
IPR010325Rhamnogalacturonate lyasePFAMPF06045Rhamnogal_lyasecoord: 1..45
score: 7.8
IPR013784Carbohydrate-binding-like foldunknownSSF49452Starch-binding domain-likecoord: 149..203
score: 1.2
IPR014766Carboxypeptidase, regulatory domainGENE3DG3DSA:2.60.40.1120coord: 136..207
score: 4.3
NoneNo IPR availablePANTHERPTHR32018FAMILY NOT NAMEDcoord: 1..418
score: 9.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g04070Cucsa.312070Cucumber (Gy14) v1cgycpeB0828
Cp4.1LG06g04070CmaCh09G005970Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g04070CmoCh09G005850Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g04070Cla023071Watermelon (97103) v1cpewmB774
Cp4.1LG06g04070Csa3G892750Cucumber (Chinese Long) v2cpecuB776
Cp4.1LG06g04070MELO3C003507Melon (DHL92) v3.5.1cpemeB728
Cp4.1LG06g04070ClCG11G014710Watermelon (Charleston Gray)cpewcgB693
Cp4.1LG06g04070CSPI03G45660Wild cucumber (PI 183967)cpecpiB778
Cp4.1LG06g04070MELO3C003505.2Melon (DHL92) v3.6.1cpemedB861
Cp4.1LG06g04070MELO3C011070.2Melon (DHL92) v3.6.1cpemedB857
Cp4.1LG06g04070MELO3C007701.2Melon (DHL92) v3.6.1cpemedB876
Cp4.1LG06g04070CsaV3_2G030120Cucumber (Chinese Long) v3cpecucB0955
Cp4.1LG06g04070CsaV3_3G048100Cucumber (Chinese Long) v3cpecucB0964
Cp4.1LG06g04070Bhi09G002128Wax gourdcpewgoB0988
Cp4.1LG06g04070CsGy6G029110Cucumber (Gy14) v2cgybcpeB871
Cp4.1LG06g04070CsGy3G043130Cucumber (Gy14) v2cgybcpeB436
Cp4.1LG06g04070CsGy2G021210Cucumber (Gy14) v2cgybcpeB258
Cp4.1LG06g04070Carg03012Silver-seed gourdcarcpeB0906
Cp4.1LG06g04070Carg00420Silver-seed gourdcarcpeB0949
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g04070Cp4.1LG02g03870Cucurbita pepo (Zucchini)cpecpeB461
Cp4.1LG06g04070Cp4.1LG07g01810Cucurbita pepo (Zucchini)cpecpeB511
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g04070Cucumber (Chinese Long) v3cpecucB0956
Cp4.1LG06g04070Cucumber (Chinese Long) v3cpecucB0985
Cp4.1LG06g04070Wax gourdcpewgoB0985
Cp4.1LG06g04070Cucurbita pepo (Zucchini)cpecpeB135
Cp4.1LG06g04070Cucurbita maxima (Rimu)cmacpeB509
Cp4.1LG06g04070Cucurbita maxima (Rimu)cmacpeB786
Cp4.1LG06g04070Cucurbita moschata (Rifu)cmocpeB466
Cp4.1LG06g04070Cucurbita moschata (Rifu)cmocpeB739
Cp4.1LG06g04070Bottle gourd (USVL1VR-Ls)cpelsiB636
Cp4.1LG06g04070Cucumber (Gy14) v2cgybcpeB252
Cp4.1LG06g04070Cucumber (Gy14) v2cgybcpeB253
Cp4.1LG06g04070Silver-seed gourdcarcpeB0085