Cp4.1LG06g03830 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g03830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSequence-specific DNA-binding transcription factor
LocationCp4.1LG06 : 2851980 .. 2859299 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTTATTTGTAATCATAAACCCATAAAAAGCCCAAAAGGCAGCGAAGGCGGGGATCCGTCCAGCCGGCCCGTTTGGATATTTCTGATCGACGAGGGAACTGCAAGTACTCCTCGGTCCAAACATCAAGAAACAGTGGAGCATGGAGCGTCTCCGGCCGAGGGACAGACAGATGTTTTCCGGGTTTACGAAGGGCGAGGTAGGTATCTCATTCATGTCTCGTAGGATCTGAGCACTTGTTTGATTATCTCGGTGTTGCTGGATTTACAATATGGAAGTATAATTTCCAAGTACGGTCTCTCATCGTCTGCTGCGCAGGGTATCTATATGCATTTTGTGAACTATTGATGTTTTTTAATGATCATGTCCGAAGTATGTTTTCATGTTTAGTGGTGCAATGGAAGCTACAACGTAGCTTGTTTTGATGTGTGAACTATTGCATAATTTGTACTATTACCTCATAGTTGCTGATAAGTGAATGGACTTCATTTTATGTTTTTCGACTACATGTTCTTTCTGTTTCAACATGTTTCATTAGCAAACAGGATGGGTTTAGTGGTGGAGTTTTCGTTTTTCTTTAATTTCTGTTCTTCGGTTTATTGGCCTCATCGGTGTTCCGCCGTACATTGGTTCCCTAACTCCAACATTTGAAGTATTAACTTACCACTGTTCTTTACCAAAAGCTTGACGTTGGGGCATATTAAAGCTTTTATTTGTATTCTTCTACGTTTGAAAGGCGAAAAGAGGGAGAATTACCAGTTAGGAGTCAAATANTTCCCTAACTCCAACATTTGAAGTATTAACTTACCACTGTTCTGTACCAAAAGCTGGCATATTAAAGCTTTTATTTGTATTCTTCTACATTTGAAAGGCGAAAAGAGGGAGAATTACCAGTTAGGAGTCAAATATTTGTCTACCTATACTGGAAAAGGATTACTATATCAATGTCATCTACCTTAGAAATCAACTCTCCTTAAACTTACNATTACTATATCAATGTCATCTACCTTAGAAATCAACTCTCCTTGAACTTATTTGAGTCACAAATTTTAGCATCTTCTTACAAACTACTGTATTCAGAAACATGCCCTTGTACAAAACAGCAAAGAGCAAGTGAATCTTCCTATACTTTTCGTCACAATGAAAAATAGTTTTTGCAAATGTAAAGTTGAGAAGGCAAGAAAAATAAATTTCCCGGTTTCTTTTGTTTTTTAGGACTCCTCTTGTGTGTGTATTTTGATTTCCACCAGCCGGGAAGCGCTCTTGTTAATACCCCTGACTCTTTGCCTTCTTTTTTCGGTGCACTCGGAACAATGTTTTCTGTGTGATCTCATGCTTGTATGCTCTTATCATCCATCTAATTGAAAATTTTGCCTTTTATTAAATAAAAACAAACCTTCTGAGAAGCAGAACTAATTACGTATAACTTGTTGCTTTTATTGTGTTTTCTTCAAATGAAAAAAGAGTTTTTTAATAAATTTTATTTTCAGGATATTCTGGACTCTGATGTCATATTTATTTCTTTACTTTCATTTGGTACCTTTACACTGAATCCATTATAAAATATACTTTGGCATCAATTTAGAATTTCCTTTTGGATCGAGAGCTTGTTGTACATACTTCTTATAACATTTTAGTTTTCCCATCCCACATGGCTTTAAACTTTGCAAACAGATAGCGAAAATGGAGAAATTGATAGAGGAATCAGGAGAACAATTGCTTGATCGAGATTTTTGTCAAAAAGTTACCAAACGTTTCAAGTGAGTATCATTTTTCTTGTTATCATAAAACTTTTAATTAATCTTTAAATATGTATATGACGTATGTATAATGTTGAGTTCTCTTGTTTGGCATTCCATGTCTATACAGTCGGTCCTCCGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTTATCATATTGTTTATGTTTTTTCTTATTCTGTTTTTTATTTTTTATTTTTTTTTATATATAAATAATATTCTACTTCTATTGTTGTATATCTTGCGAATAGGACTTGATGAACCTTTTTTTATGGGACTTTGGAAATCGTTGTGGAGATTCTTGGCAGAGAGAGAGAGATTCATGGTGGTACCAGCTTACNTTTATATATAAATAATATTCTACTTCTATTGTTGTATATCTTGCGAATAGGACTTGATGAACCTTTTTTTATGGGACTTTGGAAATCATTGTGGAGATTCTTGGCAGAGAGAGAGAGATTCATGGTGGTACCAGCTTACATCGAGTGTTCACACATCTTAATTTTCAGGACGTCTCCCTTAATTTGATTAGTGGGCGTGTCCTCCAACATTTGGAGAAGGATAAAAGAGCGAAGAGTATTCTTATTGAACATTTCTTAGATTTAAACTCTTGTAGCTACTCTATTCTTCAAACTAAATCCAATTAGGAAGTCCTTGGGTAGTTCCTTGACTTGAGCTTGGATGACACCTCCTCCTTCCTTATTATATATTGGTTTTTGCTACATTGAAGTTCTACGTTTCCTAGTGGGTACTTTGGCAGGGTATTTGGAAAGAGAAGAATAAAAAGTTTTTTGAAGCTTGATTTTTCAGTGGGGTTATGTTTGGAGTCCTGCATCACTGCAAATCTCCCATAATTACAACAGTAGAGTCTTATATGGGTGTCCTGAGATGTTTTTTTTTTTTCTCTCTTTTCTTTTTTCTTTTCCGTCTTCTCCATATTTACTTTATCTGATCTTTTGTATTTTAGNTTCTCTCTTTTCTTTTTTCTTTTCCGTCTTCTCCATATTTACTGTTCTTTATCTGATCTTTTGTATTTTAATGTTTGAGCAAAAAGGTTCTGGTGAAAAGTTTGTATTCATACAATGTTACAGGTATACGATTGGTTTGAAAGCAGACTGCAAGACTTCCCAAAAATTGAAAAGAGGATGTCTGAAATTCCGAAAGCTTGCCCTTCCAATAAGACTCAGGAAAGTTCTCAAGGCCCCGAAGGTAATTTGAGTTAAGGTTTGCTTCCAATGTTTAAGGCAAAGTTACTCAGCTGTAGGATAGTTTATTGTTAAACGACAGTTCCTTTCTACTTATTACTCTAACTGCAACCTTCATACCTTTTCGTTTGGACATATGTTAACAATATTTTCATTTGGAACAATTTGAATGATGCTTTCGAGTGATCTAAAATTTGAATTTATTGAGAATATGTTAACCTCCAATAGAAAATGTTTGTTATTTTTCATTGATGAGATGAAATCTAAGCAATTTGGTGCAACAGAAAACGTTTTTTGTACAAAAGGAAAAAAGGGAAAATGTCTCCCCTGAGGGTTAGTATGTATTGTATGGGTTCGACATACGTGAGATAGAGGTAGGGGTAGGTTGTATTTTGGCAAGGTTTGTGCGTAGATAGTGACTAGCCTCGAGTTGGTTAGACATTATATCATGTATGGTGTGCATTTGCACCCTCTTGAGCTCACTTTTAGTAATTAACAGTTTTGTCCTAACATTAATCTACATATTAAGAAATGTTTAATTTCACCCGCATATAGCTGCATTTCCATTAAATGCACTAGTGCAATGCATGGAGCAGGGGCAAGTTGAGGCAATATTTTCATTTGGTATTTTGCTTGCCCTTGGACTTGAGATCTTTTGTCCTCTCTTCCACGGTCATTTTTAAGATACATTTTCTTGATTGGTTGTTTATTACTGTAGTTATATTGGGTCGATTATTTAATTGCATGTTCCCATTTTTTTTTTTTTTTTTCCTTCCCTAGTTTTTCTATTGAGTAGTTGGACTATTTAACATAGAATATGGAGCTAACTACCATAGGTTGACCTGATGGTCATTGAGGCTAGTGTANTCCTTCCCTAGTTTTTCTATTGAGTAGTTGGACTATGGAGCTAACTACCATAGGTTGACCTGATGGTCATTGAGGCTAGTGTAAAACACAAGGTATTTTGCGGTAATGGGTTCACACCCACGGTGTCGAGGTGTTGTAACTCCTACATAGGATATTAAAATTGTATGAGTTTCTTTACAACTAAATATGGTAAGGTCAAATACTTGTCATGTGAAATTAATTAGTGTGCGTAATGTGTAGTGGATATTTGCACTCCCTGTTAACACACACACAAAAAAAAAAAAGGAATTAGAATGTGTTTTTTTATTGCATTTTATAATCTTTTTATTGAAATTAATTTGTGCAGATGGGACCTTTTTCTTTTGCTCCTCCACATGCTAATGACCTTTGTTTAAAAGCAGGCAAAAAGAAACCAGATTTGTCAGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGTGAAGAAAACACTGCCATTAATTTTGACTAATAAAGTTGGTTCTGTTTGGTTGGGTGCATCTTTTGGGTGCCTGTCTCTGTATTTGCTCTGATGGTCTTTAATTGAGCTAAGAAACATATGCTTGAATTCAGTCTTTTACGGATTGCATATGACTCGCTATGGATATCAGCAGATAGAAGAGTGAGCTATCTAGATAGATGGGCTAAGTTGAACGGTATCTTTGAGTTTCAAATCAAACAATCTCCTTCTTTTCTTGAGCATTTTTGGGGTTTGATTCAAAATTAAGCTTTCTTTTGCCTAGCTTGGTCTTGGCCATAGATTGAGTTGGAGCCTTGGAAATAAGGAATAGGAGTTTCAAGGGAAAATATAGAGGATTGATTGGAAGTGTGGGATTGGCCTTGTATATTGTTTGTAGTCGGCTCCCTTTCTTTATGGAGCTTCTCTTGATGACGGGCTCTCTTAAACTCCTTGGCTTCCCCTTCCAGATCTGATGTCTGGTCCTCTGCAGTATTTCGTTCAGCGGCATCTTTGTTTCTGATCACAAACAATCTCTATAAATCGTAAACAAAAAATAAATGCGCTATGAAGTAAGAATTGGGAAGTTATGACACACATTGAATTGCATGTCCATGTAGCCATTTAAAATCATACTATCAGTGTGATTACTTTGTAACTGCTATTGAAAAATCACTTTTGGTTTACTGCGATGTTAATTTGATTCATAAGCACGGTTGTTTTTTTAATAGCATATGCAGATTGACATGTTTCAGTATAATATCTCAAAATAGCATGCCTCTTATTCAGTCTTCTCCTCATGACAAGCAGGCTGCCTGTTGAATCTAATTAGGAAATTTCTTCTGGGTATCTGAATGTAATTGTACTGGATTGAAGATTCAATGTGGTGGCTAACTACATGAAGGAGATGATTTTACTATGAAAATCTTTTACGTTCAGGTTATTTAAGGGGAAAAAATAATACAGAAAAGAATGAGAACTCTACGTTGGTTTTAGATGAATCTTTATTTATGGTTTCTGCTTGTTTCTTAATCCATTTCAATTTTTTCTGGGGTTCTGATGACATTCCACTAATATTTTGTAGGTATGATGTTGCTATGTTCCTTACACATAGATTTCTTAGTTCAGGCGAAGCTGTGAGTCTTGGAACCATCACATTTTTTTTCCGTCTTGTATTATGATTTATCATGCCTTCCATGATTTGTTGATCCAAGTGAGCTCATTGCTCACAAAAGGCGTCTAGGTTTGAGGAACACGCTTAAGTTATACATGCATGTATGTCTGTGATATGAGTATCTGAGTATAATTGCATGCTAGTTTTCAGTTGTGGATGGAATGTATAGTTGTCTGATTGGTTTGCCGATTCATTAAAGGAAGTGCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGGCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGCCAGAAGGTGAAGGCTGGGGACCTTGTACTCTGCTTCCAGGTGACTATGCAAAACATTCAATTGTTCATTTCTCAGTAGTCCACTTCATCTTAGAGTGTTAAAAACATTTTTAGGAGAGGAGGGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTCCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGATTCGTTACGATCATGATAGCACCGAGGCAAGTATATCATTTTCTTATGCTTTATCGATCGTAATTTCAGCTTTTGAAGGAATTCTCACACACTTATCCATCCAATTACCAGGAAAAAGTTCGTTTAAGAAGATTATGTCGCAGACCGGCACATCAATTCTAATCTGTCTTTGCCATCGATTCATCACCTTTCCATGTGTCACTCCAACATCTAAGCTGGAGAGTGAAGACATGAATGGTTTGCCTCAGAAAGCACAATAGCTCAAGCTAGTTTTGTCTGTTCTTTCAGCAAGTTGAGGTAATGTTGTATGTAAAATTTCATAATAGAACCGCTTTCATGTTTTCACCTTATTGCTTCTGTAACCATGGCATCTTTAATTTCGTCCGAAGACGATAAACCTTGGGGACAAGAATGGGACACGCACATGTAATTGTTGCACATACTTGTCTCTGCTAATCGGGCAAAGACGAGTTCAAAGTTTATGTAGGCTTGCAAATCTCTGTCCTAACACCAGATTACTAAACTATGTACTCATAAAACATATTAGAGTATATTAATGAGTGATTTGTATGAAGATCTCAGAAAGAAAAAAGGAATTTATAGGTGTAAGGATGAAGGGGTTTTGCTTTAATTGCAGGGCTGGGGTTGAAGTTGAATTAATTGTAAAGTGAAGGGGAGGGGGAAGAAACATGAGATGCATTTTGTTGGTTTGATGATTTTCGTTTGAAGGGGTTATTTATTTCAGCTTCAATGTTCATTCAGCCCATAGTTTTGGAACAATACCATCTAGTTTCTATAGTACAAACTGAAAGAACAGTGATTGTAATTAAATTCAGTTGCATACCATCTGCCCTTTTTCTTTTCATTTTTGATGGTGAGGGACTTTACAAGTTTACCCTATCACTTCTTCAACTGCATCTCTTGCACTTAAACCCCATCCATATATTCTCTCTCTCTCCAACTTCTCACTCATATAACCACCATTAATTATGTGTTTTGAGATTGTTTTTAGCTTCACACCACTCTCTTCACATATTTGATTTTGTGTTAGATTTTTTTAATTGGACAAATACACGAGAGGACGAGAGGATAGGAGGGTTCAAACATCTAATCTCTTAGTTCAAGGTACATGTATAGGATACTCAAATTGGCTGATCTTAAGAGCAACTCATGTGAGTCCGATAAGTTTGATTTATACTTGATTTAGTTTTTAGAAGATTTAGTTTACAAGTTTCAAATTCAGGGGATAACATCTAGATATTTAAAATCTAGACGATTTTAGAATGGTAAGAGATAAGATGTGTGGCTTG

mRNA sequence

TGGTTTATTTGTAATCATAAACCCATAAAAAGCCCAAAAGGCAGCGAAGGCGGGGATCCGTCCAGCCGGCCCGTTTGGATATTTCTGATCGACGAGGGAACTGCAAGTACTCCTCGGTCCAAACATCAAGAAACAGTGGAGCATGGAGCGTCTCCGGCCGAGGGACAGACAGATGTTTTCCGGGTTTACGAAGGGCGAGCGAAAATGGAGAAATTGATAGAGGAATCAGGAGAACAATTGCTTGATCGAGATTTTTGTCAAAAAGTTACCAAACGTTTCAATCGGTCCTCCGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACGATTGGTTTGAAAGCAGACTGCAAGACTTCCCAAAAATTGAAAAGAGGATGTCTGAAATTCCGAAAGCTTGCCCTTCCAATAAGACTCAGGAAAGTTCTCAAGGCCCCGAAGGCAAAAAGAAACCAGATTTGTCAGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACACATAGATTTCTTAGTTCAGGCGAAGCTGAAGTGCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGGCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGCCAGAAGGTGAAGGCTGGGGACCTTGTACTCTGCTTCCAGGAGAGGAGGGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTCCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGATTCGTTACGATCATGATAGCACCGAGGAAAAAGTTCGTTTAAGAAGATTATGTCGCAGACCGGCACATCAATTCTAATCTGTCTTTGCCATCGATTCATCACCTTTCCATGTGTCACTCCAACATCTAAGCTGGAGAGTGAAGACATGAATGGTTTGCCTCAGAAAGCACAATAGCTCAAGCTAGTTTTGTCTGTTCTTTCAGCAAGTTGAGGGCTGGGGTTGAAGTTGAATTAATTGTAAAGTGAAGGGGAGGGGGAAGAAACATGAGATGCATTTTGTTGGTTTGATGATTTTCGTTTGAAGGGGTTATTTATTTCAGCTTCAATGTTCATTCAGCCCATAGTTTTGGAACAATACCATCTAGTTTCTATAGTACAAACTGAAAGAACAGTGATTGTAATTAAATTCAGTTGCATACCATCTGCCCTTTTTCTTTTCATTTTTGATGGTGAGGGACTTTACAAGTTTACCCTATCACTTCTTCAACTGCATCTCTTGCACTTAAACCCCATCCATATATTCTCTCTCTCTCCAACTTCTCACTCATATAACCACCATTAATTATGTGTTTTGAGATTGTTTTTAGCTTCACACCACTCTCTTCACATATTTGATTTTGTGTTAGATTTTTTTAATTGGACAAATACACGAGAGGACGAGAGGATAGGAGGGTTCAAACATCTAATCTCTTAGTTCAAGGTACATGTATAGGATACTCAAATTGGCTGATCTTAAGAGCAACTCATGTGAGTCCGATAAGTTTGATTTATACTTGATTTAGTTTTTAGAAGATTTAGTTTACAAGTTTCAAATTCAGGGGATAACATCTAGATATTTAAAATCTAGACGATTTTAGAATGGTAAGAGATAAGATGTGTGGCTTG

Coding sequence (CDS)

TGGTTTATTTGTAATCATAAACCCATAAAAAGCCCAAAAGGCAGCGAAGGCGGGGATCCGTCCAGCCGGCCCGTTTGGATATTTCTGATCGACGAGGGAACTGCAAGTACTCCTCGGTCCAAACATCAAGAAACAGTGGAGCATGGAGCGTCTCCGGCCGAGGGACAGACAGATGTTTTCCGGGTTTACGAAGGGCGAGCGAAAATGGAGAAATTGATAGAGGAATCAGGAGAACAATTGCTTGATCGAGATTTTTGTCAAAAAGTTACCAAACGTTTCAATCGGTCCTCCGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACGATTGGTTTGAAAGCAGACTGCAAGACTTCCCAAAAATTGAAAAGAGGATGTCTGAAATTCCGAAAGCTTGCCCTTCCAATAAGACTCAGGAAAGTTCTCAAGGCCCCGAAGGCAAAAAGAAACCAGATTTGTCAGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACACATAGATTTCTTAGTTCAGGCGAAGCTGAAGTGCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGGCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGCCAGAAGGTGAAGGCTGGGGACCTTGTACTCTGCTTCCAGGAGAGGAGGGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTCCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGATTCGTTACGATCATGATAGCACCGAGGAAAAAGTTCGTTTAAGAAGATTATGTCGCAGACCGGCACATCAATTCTAA

Protein sequence

WFICNHKPIKSPKGSEGGDPSSRPVWIFLIDEGTASTPRSKHQETVEHGASPAEGQTDVFRVYEGRAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRPAHQF
Homology
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BLAST of Cp4.1LG06g03830 vs. Swiss-Prot
Match: SHH1_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.7e-54
Identity = 111/235 (47.23%), Postives = 148/235 (62.98%), Query Frame = 1 

Query: 69  MEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRL--QDFPKIEK 128
           ME L +E G+Q L +DFCQ V   F+ S  R GK  I W +V  WF+ +L  Q  PK + 
Sbjct: 22  MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 81

Query: 129 RMS--------EIPKACPSNKTQESSQG------PEGKKKPDLSELEFEARSSKDGAWYD 188
             S          P +  SN +  +  G          K  DL++L FEA+S++D AWYD
Sbjct: 82  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYD 141

Query: 189 VAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVL 248
           V+ FLT+R L +GE EVRVRF GF    DEWVN+K +VRERS+P+E SEC +V  GDL+L
Sbjct: 142 VSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLL 201

Query: 249 CFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           CFQER DQA+Y D H++ ++R +HD   C C+FL+RY+ D+TEE + L R+CRRP
Sbjct: 202 CFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERICRRP 256

[Close]
BLAST of Cp4.1LG06g03830 vs. Swiss-Prot
Match: SHH2_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.0e-48
Identity = 114/282 (40.43%), Postives = 155/282 (54.96%), Query Frame = 1 

Query: 18  GDPSSR--PVWIFLIDEGTASTPRSKHQETVEHGASPAEGQTDVFRVY-EGRAKMEKLIE 77
           G P S   P + F++ E T          T   G    E   D F    E + K+    +
Sbjct: 2   GRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFK 61

Query: 78  ESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDF--PKIEKRMSEIP 137
           +      +R +  +   R N++ G+     +  M++ +   S +Q    PK       +P
Sbjct: 62  QIWNWFQNRRYALRA--RGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLP 121

Query: 138 KACPSNKTQESSQGPEGKKKP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLSSG 197
              P+         P G   P       D S LEFEA+S++DGAWYDV  FL HR L  G
Sbjct: 122 GMTPA---------PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIG 181

Query: 198 EAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYD 257
           + EV+VRF GF  EEDEW+N+K+ VR+RS+P E SEC  V AGDLVLCFQE +DQA+Y+D
Sbjct: 182 DPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFD 241

Query: 258 AHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           A +++ QRR HD+RGCRC FL+RY HD +EE V LR++CRRP
Sbjct: 242 AIVLDAQRRRHDVRGCRCRFLVRYSHDQSEEIVPLRKICRRP 272

[Close]
BLAST of Cp4.1LG06g03830 vs. TrEMBL
Match: D7STG8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00170 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 6.9e-91
Identity = 166/227 (73.13%), Postives = 189/227 (83.26%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDF------ 127
           KMEK+++ESGEQ L+ DFC+++T  FNRSSGRAGKP IKW+EV  WF+ RLQ+       
Sbjct: 22  KMEKVLKESGEQALNPDFCKRLTGGFNRSSGRAGKPAIKWIEVQSWFQDRLQECTHKVSC 81

Query: 128 -PKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHR 187
            P + K +  +P+  PSNK  ESSQ PE     DLSELEFEARSSKDGAWYDV  FLTHR
Sbjct: 82  PPNVSKELCVLPETFPSNKLHESSQMPE-----DLSELEFEARSSKDGAWYDVDTFLTHR 141

Query: 188 FLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQ 247
           FLSSGE EVRVRFVGFGAEEDEWVN+K+AVRERS+PLEHSEC KVK GD+VLCFQERRDQ
Sbjct: 142 FLSSGELEVRVRFVGFGAEEDEWVNVKKAVRERSLPLEHSECHKVKVGDVVLCFQERRDQ 201

Query: 248 AIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           AIYYDAH+VE+QR+MHDIRGCRCLFLIRYDHD+TEE+V LRRLC RP
Sbjct: 202 AIYYDAHVVEIQRKMHDIRGCRCLFLIRYDHDNTEERVHLRRLCCRP 243

[Close]
BLAST of Cp4.1LG06g03830 vs. TrEMBL
Match: A0A067KQT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07740 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86
Identity = 162/228 (71.05%), Postives = 186/228 (81.58%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPK---- 127
           KMEKLIEES +Q +D++F QK+ + FN SSGRAGKP++KW EV  WF++R  ++      
Sbjct: 22  KMEKLIEES-KQSMDKEFFQKIARSFNYSSGRAGKPIVKWTEVQSWFQNRQINYASKVAS 81

Query: 128 ---IEKRMSEIPKACPSNKTQESSQGPE-GKKKPDLSELEFEARSSKDGAWYDVAMFLTH 187
                K     PK+ PSN  +ESSQ P+ G+K PDLSELEFEARSSKDGAWYDV MFL H
Sbjct: 82  STDASKDDHSCPKSSPSNDAKESSQMPKAGEKVPDLSELEFEARSSKDGAWYDVDMFLCH 141

Query: 188 RFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRD 247
           RFL SGEAEVRVRFVGFGAEEDEWVN+K AVRERSVPLEHSEC KV+ GD V CFQERRD
Sbjct: 142 RFLPSGEAEVRVRFVGFGAEEDEWVNVKNAVRERSVPLEHSECHKVQVGDTVCCFQERRD 201

Query: 248 QAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           QAIYYDAH++++QRRMHDIRGCRCLFLIRYDHD+TEE+VRLRRLC RP
Sbjct: 202 QAIYYDAHVIDIQRRMHDIRGCRCLFLIRYDHDNTEERVRLRRLCYRP 248

[Close]
BLAST of Cp4.1LG06g03830 vs. TrEMBL
Match: A0A067GMG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025634mg PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.9e-85
Identity = 157/227 (69.16%), Postives = 183/227 (80.62%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFP-KI-- 127
           KMEKL+ ES + LL ++FCQK+ K F+ S+GRAGKPV+KW EV  WF+SR QD P K+  
Sbjct: 22  KMEKLLMESKDDLLSKEFCQKIAKSFSCSAGRAGKPVVKWTEVQSWFQSRQQDRPTKVTS 81

Query: 128 ----EKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHR 187
                K+ S++P ACP  K   SSQ P G+K PD+SE+EFEARSSKDGAWYDV MFL HR
Sbjct: 82  STNESKKGSDLPDACPPIKEHGSSQEPRGEKVPDVSEMEFEARSSKDGAWYDVDMFLAHR 141

Query: 188 FLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQ 247
           FL  GEAEVRVRFVGFGA+EDEWVN+K AVRERSVPLE S+C K+K G  VLCFQERRDQ
Sbjct: 142 FLDCGEAEVRVRFVGFGADEDEWVNVKNAVRERSVPLEPSDCHKLKVGGHVLCFQERRDQ 201

Query: 248 AIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
            I+YDAHI E+ RRMHDIRGCRCLFL+RY+HD+TEE+VRLRRLC RP
Sbjct: 202 GIHYDAHIAEIHRRMHDIRGCRCLFLVRYNHDNTEERVRLRRLCCRP 248

[Close]
BLAST of Cp4.1LG06g03830 vs. TrEMBL
Match: B9IKG7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08210g PE=4 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 3.7e-84
Identity = 157/228 (68.86%), Postives = 188/228 (82.46%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQD-FPKIEK 127
           KME+L++ES +QL D++F QKV +RF+ S+ RAGKPV+KW EV  WF +R QD   K+  
Sbjct: 22  KMERLLKESDQQL-DKEFFQKVARRFSSSAARAGKPVVKWTEVQSWFRTRQQDCLSKVAS 81

Query: 128 RM------SEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHR 187
                   S +PK+   NKT+ESS+ PEG+  PDLSEL+FEARSSKDGAWYDV MFL+HR
Sbjct: 82  STDASNHDSPLPKSNSFNKTKESSRIPEGETIPDLSELKFEARSSKDGAWYDVDMFLSHR 141

Query: 188 FLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQ 247
            L+SG+AEVRVRFVGFGAEEDEWVN+K AVRERS+PLEHSEC K+K GDLV CFQERRDQ
Sbjct: 142 ILASGDAEVRVRFVGFGAEEDEWVNVKNAVRERSIPLEHSECHKLKVGDLVCCFQERRDQ 201

Query: 248 AIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRPA 289
           A Y+DAHIV++QR+ HDIRGCRCLFL+RYDHD+TEE+VRLRRLC RPA
Sbjct: 202 AQYFDAHIVDIQRKTHDIRGCRCLFLVRYDHDNTEERVRLRRLCCRPA 248

[Close]
BLAST of Cp4.1LG06g03830 vs. TrEMBL
Match: A0A059CTS5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02981 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.2e-84
Identity = 151/223 (67.71%), Postives = 182/223 (81.61%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIE-- 127
           K+E L+E+SGE+   ++FC+K+T  FNRS+GRAGKP+IKWMEV  WFE R Q+  K+   
Sbjct: 22  KLEMLLEKSGEEKCSKEFCRKITISFNRSAGRAGKPLIKWMEVQSWFEKRQQEQHKVTFA 81

Query: 128 ----KRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHRF 187
               K   +IP  CP +KT E+SQ P+G+K  DL+ELEFEA+SSKDGAWYDV  FL HRF
Sbjct: 82  PDSGKNEPQIPANCPIDKTNENSQMPKGQKISDLTELEFEAKSSKDGAWYDVDNFLGHRF 141

Query: 188 LSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQA 247
           L SG AEV VRFVGFGAEEDEW+++K+ +R+RSVPL+ SEC KVK GDLVLCFQERRDQA
Sbjct: 142 LDSGVAEVLVRFVGFGAEEDEWIDVKKGIRQRSVPLDSSECDKVKVGDLVLCFQERRDQA 201

Query: 248 IYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLC 285
           IYYDAH++ +QRRMHDIRGCRCLF IRY+HD+TEEKVRLRRLC
Sbjct: 202 IYYDAHVIGIQRRMHDIRGCRCLFSIRYNHDNTEEKVRLRRLC 244

[Close]
BLAST of Cp4.1LG06g03830 vs. TAIR10
Match: AT1G15215.2 (AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1))

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-55
Identity = 111/235 (47.23%), Postives = 148/235 (62.98%), Query Frame = 1 

Query: 69  MEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRL--QDFPKIEK 128
           ME L +E G+Q L +DFCQ V   F+ S  R GK  I W +V  WF+ +L  Q  PK + 
Sbjct: 22  MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 81

Query: 129 RMS--------EIPKACPSNKTQESSQG------PEGKKKPDLSELEFEARSSKDGAWYD 188
             S          P +  SN +  +  G          K  DL++L FEA+S++D AWYD
Sbjct: 82  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYD 141

Query: 189 VAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVL 248
           V+ FLT+R L +GE EVRVRF GF    DEWVN+K +VRERS+P+E SEC +V  GDL+L
Sbjct: 142 VSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLL 201

Query: 249 CFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           CFQER DQA+Y D H++ ++R +HD   C C+FL+RY+ D+TEE + L R+CRRP
Sbjct: 202 CFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERICRRP 256

[Close]
BLAST of Cp4.1LG06g03830 vs. TAIR10
Match: AT3G18380.2 (AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding)

HSP 1 Score: 188.0 bits (476), Expect = 8.5e-48
Identity = 113/283 (39.93%), Postives = 156/283 (55.12%), Query Frame = 1 

Query: 18  GDPSSR--PVWIFLIDEGTASTPRSKHQETVEHGASPAEGQTDVFRVY-EGRAKMEKLIE 77
           G P S   P + F++ E T          T   G    E   D F    E + K+    +
Sbjct: 2   GRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFK 61

Query: 78  ESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDF--PKIEKRMSEIP 137
           +      +R +  +   R N++ G+     +  M++ +   S +Q    PK       +P
Sbjct: 62  QIWNWFQNRRYALRA--RGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLP 121

Query: 138 KACPSNKTQESSQGPEGKKKP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLSSG 197
              P+         P G   P       D S LEFEA+S++DGAWYDV  FL HR L  G
Sbjct: 122 GMTPA---------PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIG 181

Query: 198 EAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYD 257
           + EV+VRF GF  EEDEW+N+K+ VR+RS+P E SEC  V AGDLVLCFQE +DQA+Y+D
Sbjct: 182 DPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFD 241

Query: 258 AHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEK-VRLRRLCRRP 288
           A +++ QRR HD+RGCRC FL+RY HD +E++ V LR++CRRP
Sbjct: 242 AIVLDAQRRRHDVRGCRCRFLVRYSHDQSEQEIVPLRKICRRP 273

[Close]
BLAST of Cp4.1LG06g03830 vs. NCBI nr
Match: gi|659132202|ref|XP_008466074.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 436.8 bits (1122), Expect = 3.0e-119
Identity = 211/223 (94.62%), Postives = 217/223 (97.31%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIEKR 127
           KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIKW EVYDW +SRLQD PKIEKR
Sbjct: 22  KMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIKWTEVYDWLQSRLQDLPKIEKR 81

Query: 128 MSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEA 187
           MSEIPKACPSNKTQESSQGPEG+K PDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEA
Sbjct: 82  MSEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEA 141

Query: 188 EVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAH 247
           EVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAH
Sbjct: 142 EVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAH 201

Query: 248 IVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRPAHQ 291
           IVEVQRRMHDIRGCRCLFL+RYDHDSTEEKVRLRRLCRRP +Q
Sbjct: 202 IVEVQRRMHDIRGCRCLFLVRYDHDSTEEKVRLRRLCRRPTYQ 244

[Close]
BLAST of Cp4.1LG06g03830 vs. NCBI nr
Match: gi|659132200|ref|XP_008466073.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-116
Identity = 211/237 (89.03%), Postives = 217/237 (91.56%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIEKR 127
           KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIKW EVYDW +SRLQD PKIEKR
Sbjct: 22  KMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIKWTEVYDWLQSRLQDLPKIEKR 81

Query: 128 MSEIPKACPSNKTQESSQGPE--------------GKKKPDLSELEFEARSSKDGAWYDV 187
           MSEIPKACPSNKTQESSQGPE              G+K PDLSELEFEARSSKDGAWYDV
Sbjct: 82  MSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEKSPDLSELEFEARSSKDGAWYDV 141

Query: 188 AMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLC 247
           AMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLC
Sbjct: 142 AMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLC 201

Query: 248 FQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRPAHQ 291
           FQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHDSTEEKVRLRRLCRRP +Q
Sbjct: 202 FQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEEKVRLRRLCRRPTYQ 258

[Close]
BLAST of Cp4.1LG06g03830 vs. NCBI nr
Match: gi|449436892|ref|XP_004136226.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 8.9e-116
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIEKR 127
           KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIKW EVYDW +SRLQD PKIEKR
Sbjct: 22  KMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIKWTEVYDWLQSRLQDLPKIEKR 81

Query: 128 MSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEA 187
           +SEIPKACPSNKTQESSQGPE +K PDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEA
Sbjct: 82  ISEIPKACPSNKTQESSQGPEDEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEA 141

Query: 188 EVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAH 247
           EVRVRFVGFGAEEDEWVNIKQAVRERSVPLEH+ECQKVK GDLVLCFQERRDQAIYYDAH
Sbjct: 142 EVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHTECQKVKTGDLVLCFQERRDQAIYYDAH 201

Query: 248 IVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRPAHQ 291
           IVEVQRRMHDIRGCRCLFL+RYDHD+TEE VRLRRLCRR  HQ
Sbjct: 202 IVEVQRRMHDIRGCRCLFLVRYDHDNTEENVRLRRLCRRLTHQ 244

[Close]
BLAST of Cp4.1LG06g03830 vs. NCBI nr
Match: gi|731384797|ref|XP_010648277.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X3 [Vitis vinifera])

HSP 1 Score: 347.4 bits (890), Expect = 2.4e-92
Identity = 168/227 (74.01%), Postives = 191/227 (84.14%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDF------ 127
           KMEK+++ESGEQ L+ DFC+++T  FNRSSGRAGKP IKW+EV  WF+ RLQ+       
Sbjct: 16  KMEKVLKESGEQALNPDFCKRLTGGFNRSSGRAGKPAIKWIEVQSWFQDRLQECTHKVSC 75

Query: 128 -PKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHR 187
            P + K +  +P+  PSNK  ESSQ PEG   PDLSELEFEARSSKDGAWYDV  FLTHR
Sbjct: 76  PPNVSKELCVLPETFPSNKLHESSQMPEG--DPDLSELEFEARSSKDGAWYDVDTFLTHR 135

Query: 188 FLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQ 247
           FLSSGE EVRVRFVGFGAEEDEWVN+K+AVRERS+PLEHSEC KVK GD+VLCFQERRDQ
Sbjct: 136 FLSSGELEVRVRFVGFGAEEDEWVNVKKAVRERSLPLEHSECHKVKVGDVVLCFQERRDQ 195

Query: 248 AIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           AIYYDAH+VE+QR+MHDIRGCRCLFLIRYDHD+TEE+V LRRLC RP
Sbjct: 196 AIYYDAHVVEIQRKMHDIRGCRCLFLIRYDHDNTEERVHLRRLCCRP 240

[Close]
BLAST of Cp4.1LG06g03830 vs. NCBI nr
Match: gi|731384794|ref|XP_010648276.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X1 [Vitis vinifera])

HSP 1 Score: 347.4 bits (890), Expect = 2.4e-92
Identity = 168/227 (74.01%), Postives = 191/227 (84.14%), Query Frame = 1 

Query: 68  KMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDF------ 127
           KMEK+++ESGEQ L+ DFC+++T  FNRSSGRAGKP IKW+EV  WF+ RLQ+       
Sbjct: 22  KMEKVLKESGEQALNPDFCKRLTGGFNRSSGRAGKPAIKWIEVQSWFQDRLQECTHKVSC 81

Query: 128 -PKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHR 187
            P + K +  +P+  PSNK  ESSQ PEG   PDLSELEFEARSSKDGAWYDV  FLTHR
Sbjct: 82  PPNVSKELCVLPETFPSNKLHESSQMPEG--DPDLSELEFEARSSKDGAWYDVDTFLTHR 141

Query: 188 FLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQ 247
           FLSSGE EVRVRFVGFGAEEDEWVN+K+AVRERS+PLEHSEC KVK GD+VLCFQERRDQ
Sbjct: 142 FLSSGELEVRVRFVGFGAEEDEWVNVKKAVRERSLPLEHSECHKVKVGDVVLCFQERRDQ 201

Query: 248 AIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRP 288
           AIYYDAH+VE+QR+MHDIRGCRCLFLIRYDHD+TEE+V LRRLC RP
Sbjct: 202 AIYYDAHVVEIQRKMHDIRGCRCLFLIRYDHDNTEERVHLRRLCCRP 246

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g03830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SHH1_ARATH5.7e-5447.23Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1[more]
SHH2_ARATH8.0e-4840.43Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1[more]
BLAST of Cp4.1LG06g03830 vs. TrEMBL
Match NameE-valueIdentityDescription
D7STG8_VITVI6.9e-9173.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00170 PE=4 SV=... [more]
A0A067KQT5_JATCU1.4e-8671.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07740 PE=4 SV=1[more]
A0A067GMG4_CITSI1.9e-8569.16Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025634mg PE=4 SV=1[more]
B9IKG7_POPTR3.7e-8468.86Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08210g PE=4 SV=2[more]
A0A059CTS5_EUCGR8.2e-8467.71Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02981 PE=4 SV=1[more]
BLAST of Cp4.1LG06g03830 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G15215.23.2e-5547.23 BEST Arabidopsis thaliana protein match is: sequence-specific DNA bi... [more]
AT3G18380.28.5e-4839.93 sequence-specific DNA binding transcription factors;sequence-specifi... [more]
BLAST of Cp4.1LG06g03830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132202|ref|XP_008466074.1|3.0e-11994.62PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo][more]
gi|659132200|ref|XP_008466073.1|2.3e-11689.03PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucumis melo][more]
gi|449436892|ref|XP_004136226.1|8.9e-11691.93PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucumis sativus][more]
gi|731384797|ref|XP_010648277.1|2.4e-9274.01PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X3 [Vitis vinifera][more]
gi|731384794|ref|XP_010648276.1|2.4e-9274.01PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X1 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000785 chromatin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g03830.1Cp4.1LG06g03830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33827FAMILY NOT NAMEDcoord: 67..287
score: 7.4E
NoneNo IPR availablePANTHERPTHR33827:SF2SUBFAMILY NOT NAMEDcoord: 67..287
score: 7.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g03830Cucsa.312480Cucumber (Gy14) v1cgycpeB0828
Cp4.1LG06g03830CmaCh09G006270Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g03830CmaCh01G014410Cucurbita maxima (Rimu)cmacpeB509
Cp4.1LG06g03830CmoCh01G014950Cucurbita moschata (Rifu)cmocpeB466
Cp4.1LG06g03830CmoCh09G006110Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g03830Cla023104Watermelon (97103) v1cpewmB774
Cp4.1LG06g03830Csa3G895110Cucumber (Chinese Long) v2cpecuB776
Cp4.1LG06g03830MELO3C003471Melon (DHL92) v3.5.1cpemeB728
Cp4.1LG06g03830ClCG11G015080Watermelon (Charleston Gray)cpewcgB693
Cp4.1LG06g03830CSPI03G46030Wild cucumber (PI 183967)cpecpiB778
Cp4.1LG06g03830Lsi04G023220Bottle gourd (USVL1VR-Ls)cpelsiB636
Cp4.1LG06g03830MELO3C003471.2Melon (DHL92) v3.6.1cpemedB861
Cp4.1LG06g03830CsaV3_3G048480Cucumber (Chinese Long) v3cpecucB0964
Cp4.1LG06g03830Bhi09G002164Wax gourdcpewgoB0988
Cp4.1LG06g03830CsGy3G043530Cucumber (Gy14) v2cgybcpeB436
Cp4.1LG06g03830Carg00389Silver-seed gourdcarcpeB0949
Cp4.1LG06g03830Carg03037Silver-seed gourdcarcpeB0906
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g03830Cp4.1LG02g03680Cucurbita pepo (Zucchini)cpecpeB461
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g03830Cucurbita pepo (Zucchini)cpecpeB135
Cp4.1LG06g03830Cucurbita pepo (Zucchini)cpecpeB511
Cp4.1LG06g03830Cucurbita maxima (Rimu)cmacpeB786
Cp4.1LG06g03830Cucurbita moschata (Rifu)cmocpeB739
Cp4.1LG06g03830Cucumber (Gy14) v2cgybcpeB253
Cp4.1LG06g03830Melon (DHL92) v3.6.1cpemedB876
Cp4.1LG06g03830Silver-seed gourdcarcpeB0085
Cp4.1LG06g03830Cucumber (Chinese Long) v3cpecucB0956
Cp4.1LG06g03830Cucumber (Chinese Long) v3cpecucB0985
Cp4.1LG06g03830Wax gourdcpewgoB0985