Cp4.1LG06g02350 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g02350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEmbryo defective 1273, putative
LocationCp4.1LG06 : 1195336 .. 1197626 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTATAGAAGACGAAGAGAATCCTGAATCAGAGAACCCGCCCAACCCTACATAGATAGAGAAAGAGAGGGAAGATTAATGTATAGAAGACGAAGGCGATAACGGCTAACGGCTAACGGCGAATTCAGGGACATCAAATGGCGCTGCCGGCGTCAATTCTGCTGCGCTCCTTATCCCTCACGTCCAGGGTAAAAAGCTTGTTTATCGACTCGCTTGATTTATGATGAATTACCAAATGAACTGATTGAGCTCGATAATTTACTTGCCTTAGTTTCTTTTAGACATTTCTTTAATTTGTTAGATTACTTCAGGACTCAAAGAAGTCAAGTGTGTGCAAATTTCTTTATATCTTCTTCTAGGTTTATTGGTATAATCGTATTGACTGTAGGCTAATTGTGATTGAATGCGGGAGAAAGAGGTTTGTATCATTTATTACGCTTTGAACCTACTGGATACCAGTTGCTTCAGGGAATGGACTGATTCCACTTCCAAAATTTCAAGGGAAAATGTTGATGGGATTCTGAAGAATAAGAAATGGTGAATTGCTGGGGGTTTAAAGTAGTTAATTTAGGTAGTTTTGGTTTCGAAAATAGAATACTGTTGATTTTGATTTTGATTTAGTTCATTAATTTAGTAGACTTGCTAGTTTTTTGAGATTTTTCTTGTTCTGGTGTCACACTTTGGGTTGTGTTTGGCAACTTTTGCTATTACGGATGCTTATGCTTGTGTTTGGCAACTCATAAGCTCAAGTGTTTGGGTTGGTTAATGATTTAACATGGTATTAAATGTGAGATCCCACGTCGGTTGGGGAGAAGAATAAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCGTAAAAACCTTGAGAGGAAGTTCGAAAGGGAAAACTTGAAAGGGAAAGTCCAAAGAAGACAATATCTACTAGTGGTAGGCTTGAACGGTTACATTAGAGTAGTAACTCCTAAGTTTGAACCTGTAATGTCACTTAGTGGGTCTTCTACTAATTTCCAAGCCCATGAGGGGAGAGTTTTAAAAGCACAAAAATAATTGAATTTACTGTACCACGTCAACCGAAGTTTCTAAGTTGATTGGTGATTTAACGAAATGAGATTTTGGATATTTTGCTCACTTTGAGATGCATTTACCCCTTGTTTTATGACCCTTGATCCAACATAGGCTTGAGAATGTATTTGCATATTTCTGCAGATTAGACTGCTCAAGGAGACACCATCGTTCGGGCCTAATAGCTGCTTGCCGCTGCTTGGCAGTCGCCGAGCTAGCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACGAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGTTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTTAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGTACATTTTTTTTTTTTTTTACTTTATTCCATATACTTCAATTTTTCTTCATTCTACAAGTAATAGAAAATCAACCATTCTATAGGAATCAAGCTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCAGTTGGTCAAGGTACGTCTTAAGCATGGACGAATTAGATTGTTTCGAGTGTGTCTATATTTGCTACCATGAAGAATCTGGTCGTCGTGTAACGATGGAAAACCATAATATGATGAGATGTATGTCAACCTTGTTCATCATTTAGAGACACATTGATGAGCCAGTCATGTATGAGTAGGTTTAATTTTCTTTGAGTTCAACAAAATGCGGGTGGAGGGATTTGAACTCTTGACCTTTGGGTCGAAGACATATTTAACTAGTGAGTTATGCTCAAATTTGCATGTATGAGTAGATTGTACGAATGAAATTTTTTGCTCTGGAAGGTAATTCTAGCTCGGTATTGTGTATCGGCTTCATAATTTGATAGTGAGCAATGTTTGGTGGCGT

mRNA sequence

TGTATAGAAGACGAAGAGAATCCTGAATCAGAGAACCCGCCCAACCCTACATAGATAGAGAAAGAGAGGGAAGATTAATGTATAGAAGACGAAGGCGATAACGGCTAACGGCTAACGGCGAATTCAGGGACATCAAATGGCGCTGCCGGCGTCAATTCTGCTGCGCTCCTTATCCCTCACGTCCAGGATTAGACTGCTCAAGGAGACACCATCGTTCGGGCCTAATAGCTGCTTGCCGCTGCTTGGCAGTCGCCGAGCTAGCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACGAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGTTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTTAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCAGTTGGTCAAGGTACGTCTTAAGCATGGACGAATTAGATTGTTTCGAGTGTGTCTATATTTGCTACCATGAAGAATCTGGTCGTCGTGTAACGATGGAAAACCATAATATGATGAGATGTATGTCAACCTTGTTCATCATTTAGAGACACATTGATGAGCCAGTCATGTATGAGTAGGTTTAATTTTCTTTGAGTTCAACAAAATGCGGGTGGAGGGATTTGAACTCTTGACCTTTGGGTCGAAGACATATTTAACTAGTGAGTTATGCTCAAATTTGCATGTATGAGTAGATTGTACGAATGAAATTTTTTGCTCTGGAAGGTAATTCTAGCTCGGTATTGTGTATCGGCTTCATAATTTGATAGTGAGCAATGTTTGGTGGCGT

Coding sequence (CDS)

ATGGCGCTGCCGGCGTCAATTCTGCTGCGCTCCTTATCCCTCACGTCCAGGATTAGACTGCTCAAGGAGACACCATCGTTCGGGCCTAATAGCTGCTTGCCGCTGCTTGGCAGTCGCCGAGCTAGCATTGCTTGTTCAATGAAAGCAAAAATGGCTGGGTTTATGGATTCTAATTCTATGCCCATACGAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCATGCCTGAACCAGTTAAAACTTTTCCATGGAAGGATGCAGAGAAGATACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACAGTGAAGTGGTCTGTTCTCTTGTTCTTTGTTGTTAGCTCCTTATCAGATTTTGTAGCATCCATAGTTAAAAACCAGGAGTTATTGATTCCCATTGGTCTCTTTGCTGGTGTCTTGTTGACTAACCTTTTAAAAGAGATATCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAGCAACTTTACGGTCTCGGTTCCTTCTTCGTTCTCGTGAAGCTAATTACTTATGGCCTCACAATTCAAGTACAGACATTTCCTCTGCATGTAGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAAAAATTTGTCAAGAGAAAGAAATGGACTGAATGAACAGAGCCCTTCAGTTGGTCAAGGTACGTCTTAA

Protein sequence

MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSMPIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS
Homology
[Close]
BLAST of Cp4.1LG06g02350 vs. TrEMBL
Match: A0A0A0L2N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645300 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.5e-85
Identity = 174/227 (76.65%), Postives = 189/227 (83.26%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L K   +   NSC PL G RRA++  S+K KMA FMDSN +
Sbjct: 1   MALPASISLPSLSSTSRIILFKGKTTL--NSCFPLHGGRRATLTSSVKVKMARFMDSNFV 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IENLKEKMQEV+PEPVK FPWK+AEKI+VERL FMGKET+KWS+LLFFV+SS SD V
Sbjct: 61  PIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKETLKWSLLLFFVLSSCSDIV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSEESSFKKQLYG GSFF+LVKLI Y
Sbjct: 121 ASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 228
           G  IQ   FPLHVANGGLMQVLWLW+NL RERN  NEQS  VGQ TS
Sbjct: 181 GFAIQAPVFPLHVANGGLMQVLWLWRNLPRERNQPNEQSLFVGQATS 225

[Close]
BLAST of Cp4.1LG06g02350 vs. TrEMBL
Match: A0A061FMB1_THECC (Embryo defective 1273, putative OS=Theobroma cacao GN=TCM_034635 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.3e-40
Identity = 99/211 (46.92%), Postives = 137/211 (64.93%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MA+ AS +L S +L  +++ L+  PS   +  L L G RR S    MK  MA F + N +
Sbjct: 1   MAILASAVLPS-TLNIKVKQLEHQPS-QLHGFLQLNGHRRVSPRRRMKVTMAQFCEPNKI 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
             ++  +KE++ E  PE VK FPWK AE +L+ERLLF+G + +K S++  FV+SSLSDF+
Sbjct: 61  REQLNIIKERLWETTPETVKDFPWKKAENLLLERLLFVGHKALKLSLVTVFVISSLSDFL 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
            SI +NQEL++P GL  G L+T+ LKE SQE F + EE   K  L  +G FFV+VK ++ 
Sbjct: 121 YSISRNQELMVPFGLIVGCLMTDFLKETSQEAFRSPEEKGLKWHLLAIGCFFVVVKFVSA 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRE 212
              I+ + F LHVANGGLMQ LWLW++L  E
Sbjct: 181 LSAIRTRVFLLHVANGGLMQALWLWRSLLEE 209

[Close]
BLAST of Cp4.1LG06g02350 vs. TrEMBL
Match: E0CNX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08480 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.9e-37
Identity = 96/228 (42.11%), Postives = 146/228 (64.04%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAK-MAGFMDSNS 60
           MALPAS +    S   RI LL+     G +  L    +R+   + S+K + MA F + N 
Sbjct: 1   MALPASTVT-VWSSRFRINLLRPCQLHGCS--LSHAYNRQTLHSHSIKLRTMAQFSEQNK 60

Query: 61  MPIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDF 120
           + +++  L++++ E  P+ +K FPWK AE  ++++LL +G++ +KWS +  F++SS+SD 
Sbjct: 61  VKMQMSILRKRLWEAAPDSLKDFPWKKAEDTVLQQLLLLGQKALKWSFITLFILSSVSDV 120

Query: 121 VASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLIT 180
           +  I +N+EL+IP GLF G ++ + LKE S+E+F NSE++  K+ L G+G FFV VK ++
Sbjct: 121 IFCISRNKELMIPFGLFVGCMMADFLKETSRELFPNSEKTGLKQPLLGIGCFFVFVKFMS 180

Query: 181 YGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 228
             LT Q Q F LHVANGGLMQ+LWLWK L   R+G + Q+    Q TS
Sbjct: 181 TFLTSQGQAFLLHVANGGLMQILWLWKGLLEGRDGQSGQNFFSCQETS 225

[Close]
BLAST of Cp4.1LG06g02350 vs. TrEMBL
Match: W9SCY6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007095 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-36
Identity = 100/233 (42.92%), Postives = 145/233 (62.23%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTS-RIRLLKETPSFGPNSCLP----LLGSRRASIAC-SMKAKMAGF 60
           MALPAS LL S S     I+++     FG   C       LG+R  +++  ++KA M+ F
Sbjct: 1   MALPASTLLPSSSPPKFPIKVV-----FGQRLCQLQRSLFLGNRHLNLSKRAIKASMSEF 60

Query: 61  MDSNSMPIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVS 120
             S  + ++I  +KEK+++ +PE VK   W  A  IL+ERLL +GK+  KWS+++ F +S
Sbjct: 61  GGSEEVKMQINVVKEKLRKAIPESVKEVEWNKASDILLERLLSLGKQAFKWSIIVLFGLS 120

Query: 121 SLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVL 180
           S+SDFV S+ +NQEL+IP GL  G LL + LKE SQE F +S+     + L G+G FFVL
Sbjct: 121 SVSDFVFSVSRNQELIIPFGLLVGCLLADFLKETSQEAFPSSQGKGLDRNLIGIGCFFVL 180

Query: 181 VKLITYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 228
           VK ++    I+ + F L VANGG MQVLWLWK L + ++  ++++ S  Q TS
Sbjct: 181 VKTVSAYFGIRGKVFLLQVANGGFMQVLWLWKTLLKGKDEGDQENSSSVQDTS 228

[Close]
BLAST of Cp4.1LG06g02350 vs. TrEMBL
Match: A0A0B0N0E0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07480 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-35
Identity = 92/221 (41.63%), Postives = 133/221 (60.18%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MAL  S LL S SL  +++  +  P      C  L    R S  C +K  MA F + N M
Sbjct: 1   MALLTSSLLPS-SLNIKVKQYEHQPC-----CSQLHNFHRLSPKCHLKVTMAQFWEPNKM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
             ++  +KE+++E  P+ VK FPWK+AE +L+++LL  G + +K S++  FV S LSDF+
Sbjct: 61  KEQLNTIKERLRENSPDSVKAFPWKEAENLLLDKLLVAGNKALKLSIVTVFVSSCLSDFI 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSE--ESSFKKQLYGLGSFFVLVKLI 180
            +I +NQEL+IP GL  GVL+++ LK+ SQE   +SE  E   K Q+  +G  FV++KL+
Sbjct: 121 YAISRNQELMIPFGLIVGVLMSDFLKQTSQEAIRSSEGKELEMKWQVLWMGGLFVVIKLV 180

Query: 181 TYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQS 220
                I  + F LHVANGGLMQVLW W++L  E   + + S
Sbjct: 181 CTWFGIGTRVFLLHVANGGLMQVLWQWRSLLAENGSMEDGS 215

[Close]
BLAST of Cp4.1LG06g02350 vs. TAIR10
Match: AT1G49510.1 (AT1G49510.1 embryo defective 1273)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-09
Identity = 46/189 (24.34%), Postives = 84/189 (44.44%), Query Frame = 1 

Query: 40  RASIACSMKAKMAGFMDSNSMPIRIENLKEKMQEVM---PEPVKTFPWKDAEKILVERLL 99
           + S+ C      +G        +  +NL  + + V    P+PVK FPW  A    ++ +L
Sbjct: 49  KRSLLCRAIHMESGHSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVL 108

Query: 100 FMGKETVKWSVLLFFVVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNS 159
            +    VK+  +    VSS+S+      + +  L+P  L  G+++  +L+E + ++    
Sbjct: 109 DLAISVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRL 168

Query: 160 EESSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQVLW---LWKNLSRERN 219
           +E+     L  +  FF L+KL         +    H ANG L++ LW    W   +R  +
Sbjct: 169 KEAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTS 228

Query: 220 GLNEQSPSV 223
           G   Q+ S+
Sbjct: 229 GNPLQNHSL 237

[Close]
BLAST of Cp4.1LG06g02350 vs. NCBI nr
Match: gi|659103692|ref|XP_008452688.1| (PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 4.2e-89
Identity = 178/227 (78.41%), Postives = 195/227 (85.90%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L K   +   NSC PL G RRA++  S+K KMA FMDSN M
Sbjct: 1   MALPASISLPSLSSTSRIILFKGKTTL--NSCFPLNGGRRATLTSSVKVKMARFMDSNFM 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IENLKEKMQ+V+PEPVK FPWK+AEKILVERL+FMGKET+KWS+LLFFV+SS SDFV
Sbjct: 61  PIEIENLKEKMQKVVPEPVKIFPWKEAEKILVERLVFMGKETLKWSLLLFFVLSSFSDFV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSEESSFKKQLYG+GSFF+LVKLI Y
Sbjct: 121 ASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGIGSFFILVKLIVY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 228
           G  IQ Q FPLHVANGGLMQVLWLW+NL +ERN  NEQSP VGQGTS
Sbjct: 181 GFAIQAQLFPLHVANGGLMQVLWLWRNLPKERNQPNEQSPFVGQGTS 225

[Close]
BLAST of Cp4.1LG06g02350 vs. NCBI nr
Match: gi|449447093|ref|XP_004141304.1| (PREDICTED: uncharacterized protein LOC101205191 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 2.2e-85
Identity = 174/227 (76.65%), Postives = 189/227 (83.26%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MALPASI L SLS TSRI L K   +   NSC PL G RRA++  S+K KMA FMDSN +
Sbjct: 1   MALPASISLPSLSSTSRIILFKGKTTL--NSCFPLHGGRRATLTSSVKVKMARFMDSNFV 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
           PI IENLKEKMQEV+PEPVK FPWK+AEKI+VERL FMGKET+KWS+LLFFV+SS SD V
Sbjct: 61  PIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKETLKWSLLLFFVLSSCSDIV 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
           ASIV+NQELLIPIGLF GVLLT+LLKEISQEVFGNSEESSFKKQLYG GSFF+LVKLI Y
Sbjct: 121 ASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVY 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 228
           G  IQ   FPLHVANGGLMQVLWLW+NL RERN  NEQS  VGQ TS
Sbjct: 181 GFAIQAPVFPLHVANGGLMQVLWLWRNLPRERNQPNEQSLFVGQATS 225

[Close]
BLAST of Cp4.1LG06g02350 vs. NCBI nr
Match: gi|590596706|ref|XP_007018409.1| (Embryo defective 1273, putative [Theobroma cacao])

HSP 1 Score: 172.9 bits (437), Expect = 6.2e-40
Identity = 99/211 (46.92%), Postives = 137/211 (64.93%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAKMAGFMDSNSM 60
           MA+ AS +L S +L  +++ L+  PS   +  L L G RR S    MK  MA F + N +
Sbjct: 1   MAILASAVLPS-TLNIKVKQLEHQPS-QLHGFLQLNGHRRVSPRRRMKVTMAQFCEPNKI 60

Query: 61  PIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDFV 120
             ++  +KE++ E  PE VK FPWK AE +L+ERLLF+G + +K S++  FV+SSLSDF+
Sbjct: 61  REQLNIIKERLWETTPETVKDFPWKKAENLLLERLLFVGHKALKLSLVTVFVISSLSDFL 120

Query: 121 ASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLITY 180
            SI +NQEL++P GL  G L+T+ LKE SQE F + EE   K  L  +G FFV+VK ++ 
Sbjct: 121 YSISRNQELMVPFGLIVGCLMTDFLKETSQEAFRSPEEKGLKWHLLAIGCFFVVVKFVSA 180

Query: 181 GLTIQVQTFPLHVANGGLMQVLWLWKNLSRE 212
              I+ + F LHVANGGLMQ LWLW++L  E
Sbjct: 181 LSAIRTRVFLLHVANGGLMQALWLWRSLLEE 209

[Close]
BLAST of Cp4.1LG06g02350 vs. NCBI nr
Match: gi|719975772|ref|XP_010248311.1| (PREDICTED: uncharacterized protein LOC104591222 [Nelumbo nucifera])

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37
Identity = 89/183 (48.63%), Postives = 122/183 (66.67%), Query Frame = 1 

Query: 38  SRRASIACSMK-AKMAGFMDSNSMPIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLL 97
           S R S  CS+  A MA F D + + + ++ L EK+ E +PEPVK FPW+ AE I++++LL
Sbjct: 36  SHRTSQICSINIATMAQFSDPSKLRVHMDKLGEKIWEALPEPVKEFPWRRAEDIVIQQLL 95

Query: 98  FMGKETVKWSVLLFFVVSSLSDFVASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNS 157
            +GK+ +KWS++  FV+SSLSD + SI +N+ELLIPIGL  G ++   LKE S E+F  +
Sbjct: 96  LLGKKALKWSLITAFVLSSLSDIIFSISRNRELLIPIGLSVGCMMAEFLKETSGELFQEA 155

Query: 158 EESSFKKQLYGLGSFFVLVKLITYGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLN 217
           ++     QL G+GSFFVLVKLI+    +Q + F  HV NGG M VLWLW    R RNG +
Sbjct: 156 KKGDLAWQLLGIGSFFVLVKLISV-YFMQERAFLSHVGNGGFMHVLWLWNKNLRGRNGDD 215

Query: 218 EQS 220
           E S
Sbjct: 216 ENS 217

[Close]
BLAST of Cp4.1LG06g02350 vs. NCBI nr
Match: gi|359493007|ref|XP_002283527.2| (PREDICTED: uncharacterized protein LOC100262671 [Vitis vinifera])

HSP 1 Score: 162.5 bits (410), Expect = 8.4e-37
Identity = 96/228 (42.11%), Postives = 146/228 (64.04%), Query Frame = 1 

Query: 1   MALPASILLRSLSLTSRIRLLKETPSFGPNSCLPLLGSRRASIACSMKAK-MAGFMDSNS 60
           MALPAS +    S   RI LL+     G +  L    +R+   + S+K + MA F + N 
Sbjct: 1   MALPASTVT-VWSSRFRINLLRPCQLHGCS--LSHAYNRQTLHSHSIKLRTMAQFSEQNK 60

Query: 61  MPIRIENLKEKMQEVMPEPVKTFPWKDAEKILVERLLFMGKETVKWSVLLFFVVSSLSDF 120
           + +++  L++++ E  P+ +K FPWK AE  ++++LL +G++ +KWS +  F++SS+SD 
Sbjct: 61  VKMQMSILRKRLWEAAPDSLKDFPWKKAEDTVLQQLLLLGQKALKWSFITLFILSSVSDV 120

Query: 121 VASIVKNQELLIPIGLFAGVLLTNLLKEISQEVFGNSEESSFKKQLYGLGSFFVLVKLIT 180
           +  I +N+EL+IP GLF G ++ + LKE S+E+F NSE++  K+ L G+G FFV VK ++
Sbjct: 121 IFCISRNKELMIPFGLFVGCMMADFLKETSRELFPNSEKTGLKQPLLGIGCFFVFVKFMS 180

Query: 181 YGLTIQVQTFPLHVANGGLMQVLWLWKNLSRERNGLNEQSPSVGQGTS 228
             LT Q Q F LHVANGGLMQ+LWLWK L   R+G + Q+    Q TS
Sbjct: 181 TFLTSQGQAFLLHVANGGLMQILWLWKGLLEGRDGQSGQNFFSCQETS 225

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g02350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG06g02350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2N8_CUCSA1.5e-8576.65Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645300 PE=4 SV=1[more]
A0A061FMB1_THECC4.3e-4046.92Embryo defective 1273, putative OS=Theobroma cacao GN=TCM_034635 PE=4 SV=1[more]
E0CNX1_VITVI5.9e-3742.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08480 PE=4 SV=... [more]
W9SCY6_9ROSA1.7e-3642.92Uncharacterized protein OS=Morus notabilis GN=L484_007095 PE=4 SV=1[more]
A0A0B0N0E0_GOSAR2.5e-3541.63Uncharacterized protein OS=Gossypium arboreum GN=F383_07480 PE=4 SV=1[more]
BLAST of Cp4.1LG06g02350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49510.16.0e-0924.34 embryo defective 1273[more]
BLAST of Cp4.1LG06g02350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103692|ref|XP_008452688.1|4.2e-8978.41PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo][more]
gi|449447093|ref|XP_004141304.1|2.2e-8576.65PREDICTED: uncharacterized protein LOC101205191 [Cucumis sativus][more]
gi|590596706|ref|XP_007018409.1|6.2e-4046.92Embryo defective 1273, putative [Theobroma cacao][more]
gi|719975772|ref|XP_010248311.1|2.2e-3748.63PREDICTED: uncharacterized protein LOC104591222 [Nelumbo nucifera][more]
gi|359493007|ref|XP_002283527.2|8.4e-3742.11PREDICTED: uncharacterized protein LOC100262671 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g02350.1Cp4.1LG06g02350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36000FAMILY NOT NAMEDcoord: 1..227
score: 3.9
NoneNo IPR availablePANTHERPTHR36000:SF1SUBFAMILY NOT NAMEDcoord: 1..227
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g02350Cucsa.353110Cucumber (Gy14) v1cgycpeB0923
Cp4.1LG06g02350CmaCh09G003190Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g02350CmoCh09G003170Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g02350Cla020902Watermelon (97103) v1cpewmB767
Cp4.1LG06g02350Csa4G645300Cucumber (Chinese Long) v2cpecuB782
Cp4.1LG06g02350MELO3C016846Melon (DHL92) v3.5.1cpemeB734
Cp4.1LG06g02350ClCG05G017630Watermelon (Charleston Gray)cpewcgB702
Cp4.1LG06g02350CSPI04G25080Wild cucumber (PI 183967)cpecpiB784
Cp4.1LG06g02350Lsi04G014490Bottle gourd (USVL1VR-Ls)cpelsiB638
Cp4.1LG06g02350MELO3C016846.2Melon (DHL92) v3.6.1cpemedB867
Cp4.1LG06g02350CsaV3_4G035360Cucumber (Chinese Long) v3cpecucB0969
Cp4.1LG06g02350Bhi09G002613Wax gourdcpewgoB0997
Cp4.1LG06g02350CsGy4G023380Cucumber (Gy14) v2cgybcpeB562
Cp4.1LG06g02350Carg21753Silver-seed gourdcarcpeB0448
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g02350Cucumber (Gy14) v1cgycpeB1044
Cp4.1LG06g02350Cucurbita maxima (Rimu)cmacpeB199
Cp4.1LG06g02350Cucurbita maxima (Rimu)cmacpeB504
Cp4.1LG06g02350Cucurbita maxima (Rimu)cmacpeB507
Cp4.1LG06g02350Cucurbita maxima (Rimu)cmacpeB787
Cp4.1LG06g02350Cucurbita moschata (Rifu)cmocpeB172
Cp4.1LG06g02350Cucurbita moschata (Rifu)cmocpeB465
Cp4.1LG06g02350Cucurbita moschata (Rifu)cmocpeB740
Cp4.1LG06g02350Wild cucumber (PI 183967)cpecpiB773
Cp4.1LG06g02350Cucumber (Chinese Long) v2cpecuB771
Cp4.1LG06g02350Bottle gourd (USVL1VR-Ls)cpelsiB644
Cp4.1LG06g02350Watermelon (Charleston Gray)cpewcgB708
Cp4.1LG06g02350Watermelon (97103) v1cpewmB756
Cp4.1LG06g02350Melon (DHL92) v3.5.1cpemeB717
Cp4.1LG06g02350Cucumber (Gy14) v2cgybcpeB254
Cp4.1LG06g02350Cucumber (Gy14) v2cgybcpeB870
Cp4.1LG06g02350Melon (DHL92) v3.6.1cpemedB852
Cp4.1LG06g02350Melon (DHL92) v3.6.1cpemedB874
Cp4.1LG06g02350Silver-seed gourdcarcpeB0003
Cp4.1LG06g02350Silver-seed gourdcarcpeB0267
Cp4.1LG06g02350Silver-seed gourdcarcpeB0570
Cp4.1LG06g02350Silver-seed gourdcarcpeB1083
Cp4.1LG06g02350Cucumber (Chinese Long) v3cpecucB0957
Cp4.1LG06g02350Cucumber (Chinese Long) v3cpecucB0983
Cp4.1LG06g02350Wax gourdcpewgoB0976
Cp4.1LG06g02350Cucurbita pepo (Zucchini)cpecpeB136
Cp4.1LG06g02350Cucurbita pepo (Zucchini)cpecpeB459
Cp4.1LG06g02350Cucurbita pepo (Zucchini)cpecpeB510