Cp4.1LG05g15560 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG05g15560
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCyclin C
LocationCp4.1LG05 : 10806495 .. 10820246 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGTCAAAAACCTAAGTTTTGTAGATCTAAATTCACTAATATAATTATATAAATGTGGTAAACAATCTAATCCTTCAATGAAATTGATTTTTTTAACCATACAAGTTCGAAGCTTTAGGTCTACAAAATCTCCCTCCTTCACCCAACAGTTGGTCGAGAAAAAAGTTGATTAAAGTCGGCTATTTAATTATTAATTAATTATTTTAATTCAACTATCGGTAACGAATCGGCAGGAAGTTGCTGCAATCGTCGAACACCGACTACTATAAAACTCCTTGCGGTGGCGGACAGCCAAAACTTGGCAAATTTGTTTCAAGCATGGCTGCTAATTTCTGGACTTCATCGCACTAGTAAGCTCCTATAGAATGCCCTCGCGCTAAATCGATTCTTTTCTTTTATACATCTTGTACCAGTTTTCTTGTTCTTTATTTCTTTATGCCCATGTATCCTACAGCAAACAACTCATGGACCAAGAGGAGGTCGATGTGGTGCAATCGCTCGATAAAGATAGGGGCATTACTCTCGAGGACTTCAAGCTCATTAAGATGCACATGGCCAATTGTAATTACCCTTTTCGCATCTTCCTCTTCTTCTTCTTCATTTATTTTTTTTTTAAAATTTTGTTTATTAACGGATTTTTGATCTCGTATTGGTTACCACCGTCCCCCCCTGTTCTCTTAGTTTAAGTAGAACACACAATAAATTTCTCTTAATTTCAAAGTAGGATAGTTCTTTGGACTAACGTTATCGACAATATGCAAGCGATCCTAGGCAATGTCCCATCTTCCTTCAGCCTGTTACTTACCCAATGCGAAAAGGAGGGGGCAACAAGAGAGATTTTTAATGTTTCCTTCATCTCATCTGTAAACAAATGGCTTTGGAGTTCTGTCACAGAAAAGGAGGCTTTGTGGAGGAGCAACTTACCCAGAAGAAATCTAGAGGGAAAATAGATGAATGCAAAATGATTATATTTCAATTACACCCCCAGGCTTTATGCAATCCTCAATACTGAAGACCTTTTTATTAGTCAAGTTTGGAACCCCACAAATGGTACTTGGATTCAACCATGTGATGATAAATGTAAGTAGACATCTAATGGCTTTGGGATTTGTCAAAATGCTTTGAAGCTTGGCTCTAGCTTAAGTAAATGGATTTGGAAGAATGGATATTGAAAGAAAGTGAAAATATTAATGTTGAGAGCTCCTTTTGGGTGGCATTAATAACATATGACACAATCCAAAGTGAATTCGACCTTCCTCTTTTTCCACATTATGCTCTTATGTGCATAGAGGACAAGAAACCACTTTTTTGGATTTACCTTACATGGTCTTTTGGATTCGAGCTTCAATTCACACTACTTTTGAAGCTTTCCTCAGCTTGTGAGTTTTAGATCGAAATTTACCAAAGTAGGAGCGCAATTATATAATTCATTGGATTCCACTGGGAAAAGATCCTTAGATCCAATATGGTTTCTCTGAATTATTCAAAGGGAAAATTGGTAGAGCAAGAGAATTGATGCGCCAACCTCTTTATTTTCCTCTTGATTTGTTTTCTTTTCTTTTTTAGATGTGCCACCTCTTTAACTTACTTCGAATCATAACAAATTATTTTGGATTAGATTTTTTGGAGACTTCTCTCCTTTGTTGTTTAGGGTACACCATTTTGGTATTGGAGCAACTAGTTGGCTTATGATGGCTGCTGGTAATAAAGACTAGAAAGCTCATGTTACTGAATATTCAACAATGCACATCGAAGTACAAGAGGATATCGATTAGACTACCCTTTTCCCAAGAAGAGACGAGAGAACATGGTTGGTATTGTGATGAATAAGATTTGACTACAATATGTGCAAAACATAGACATGCAACCCAATAAATGCATATGATTCGACCTCCACGAGAGTGGTGAGGAAGCCTGATTGGGTCCTTAGATTAGGTTTTCCGTACAGAACACTGCCCTTTTCAAGCTCTAAATTTGAGACCACACTCAACAGGTGTCTTTCGGCTGGTAGTCTTCAACAACGAGCTTGGTCCACGATTGTGGAATATGTGTTGAAAGAAGATTTCTCGCCCTATCGCAGGAGGAGGAGGGGTACCTTTTCACAAGGGAGGGTTCCTTCTTTTCCTAAATGGGGCATCGGGTATCACTAGGGTGGGCGAAGGTGCTCTGTACTCATTTAGCTTGGCAAGCAAGTAATTTTGCCTTGTACTGGATTGGGTCAGAAAGACTTAAGGTATTCTTTTGGATTGATTTGACAGGTAGTTAGAGGATGCATGGGAAAGGAATTTTTTTTCAATAATACAATGGAAATCCGGACTTGCTGTTTTGATCCCAACGATTCCGTTTATGGAGTTTGTATCATTTGAGCATAAGTCTCTTTTTCATTCATTCAATGAAAAGTTTTATTTCTCATCAAAAAAAGAAAAGATTCTGAGGACTCGGGAAGAATTTGAGTAGATTTTCTAGCCTGATTTTGTATTTTGATTATGATGAATGCTTTCATGGATTTTTACAAGAGTTGATGGGTCAAAGAATGAAATATCTTTTTGTTTTTGGGATTGAAATTGAAGAATTTTTATATTAAATTGCCGATGGAAGGAAAAGGTTTTTGGATAAAAGATTTTACAAGAATTGTTGATCTCAACTCAAATCTTACTATTATTTTGAACTACAAGTCTTCAAATATGTTGCTGAATTCTTTCTAGTATTATGATCAGAGGGAATACCCATCATATATGAGGATTCTTCTCTTTGGGGTTTCTGTTGCAGTTTTTTCTTCTGTTATTGGTCCTTTCCTCACCTCATACCCCTTCAGCTTTCTACTCGGAAGGTTAAAATTTTAGGAAATTAATTTTTTTTTTTTGTTTGATAGGTTTTATGTGGGAGATTCAACACTATGGATCGTGTCTAAAACATCCTTCTTTCATTATTTTTCTTGCAATGATGCATTCTATATAAGCATCAAGTATAGGATCTTCATCATTTATTGTGGTGGTGTTAGGTTGTTTAATCCCTCTAGGTTCGATAGCTGGATTTTTTTGGCTTGTGTTGGATGTGGAATGGTGATTGTTACCGTTATGATTGAGGAGGTGCTATTGGATTCACCTTTTCTTCAAAGGGCATAGTTCTGTGTCATGTTAGTTTCTTTGCTACCATGTGGGGAGTTTGGTTCTAGAGGAATAATAGAAATTTTAGAGATGTGGTGCGATCTCGTGCTGGGGATTTGGAGGTGGTGAGGCTTAATGTCTCCTTATAGGCGTCCATCACTAGTCCTTTTTGCATTTATGATCTTGGTTTAATTTTGTTGGATTGGAGCCCATTTTTGTAGTTTTGCTGGGCTTGTTTTTTTGTATACCCTTGTATATTTTTTCACATTTCTCCATTCAAGTTCAGTTTCTTATCACGAAAAAAATGAATTCAAATACGAGTATGGGATTGTTTATGGGGGCTGGTAACGAAAAACCGGTACTACAAAATTTTGGCACCCACAAATTGCATGCAACAGTCTTATATTTCACTCACAGGGTCAAGATTTTACCAATCTAGTCTCATCCAAGCCTACGGTAATTTATGTCCAAAAATATGTAAATAGAACACCAAAATTTTAGAGGAAATTCTTTGAGAGCATGCGGTATTGGACCAAAACATAGTTCTATTTAGATTTAGAGCCGCATAATTGGGTCTATCACTATGATGCAAAGAATTTGAAAGGGTTACACAACAGGCAAAAAGAAGAACCTCAAGAGAACTTTTGGAGGAGAAAGTGACCAAGCTTTTCTCGTAGATATTTTCTTATTAGTTTGGTTTTTCTTTGTCTTCCTAAATTTTTATGGTACATTTTTCTATCTTTATGAATGAAAATAAAAGATTGTTTTAAAAAGTAAGAGAATAGGTTGTTCTCTGATTCTTGTTTTCCTTTTGTTTCAGATATACTGAAGTTGGCTCAACATGTGAAAGTTAGACAAAGGTAGTCATGGTTTGGTTATTTCTTTATTATATCATTATGTTTCACAATTTTGTAAGATATTGTCCACAATTGCATGGAAATTATTCCTTGAAAATGCATGAATTCATGTTGAGTTATTCGTTTTTTCTTTTATGGACTCAACAGTGGTTTCCTTTTCGTAGTTCTTGTATTACTGCTAAGTTGTAAGAACAAAGAAAACAAATTCTTTGTATTTCTGTACCATGGATGACCTGGAAGTCTTTTCTAAAGTTCCTTTCTCGGGTTTGAGGATTTTCTCCTCTATATCTTTACTTATTCTATCAATGAAATGTGATAGGATAGGCAAAACCTTCATAACTTTACGTTTACAAGGAGTGCACAAGGGAATTAGTCTGGTTAGATAATTGTGTATCAGAGGGTATATTTTGTAAGTAGGAGAAATGTTGGCCCCTTTAGTAAGGTTTGTCAGAAGAGTGTATTTAGTCAATAATGTAAGTAGTAGGTATTCTTGCCATTTGTTTTTAAACAAGAAATGTAATTTTTCATTGAATAAATGAAAAGAAACTAATGCTTGTACAAGCTTTGGGAGTGAATGTACCCAGAACCAACAAAAGCAAAAGGAACACAATAGCAACCCAATTAGGAATAAGAGACAGAAAAGGAAACTCCCACAAAAAACAAGAAATTAAGCTCACAAAACAACTAAAGATCCTTTGGAAAAAAGCCCCACACAGAAGCTGCCCACTGAAATGTGCACAAAAGGCCAACAAAAACTTGAAAGAGATGCCACCAAATCACTAGGGACGCTCATAAGACAAGGTCAAAAGACCAAGAAGCAATAGACAAACCAGCTCCAGCAGAATAAACCTAGAACAAACTTTAAAGAACCTTCAAGGATAGAGGGAACAAACAACAATGGAGTGAAAAAACAAGAAAAGCCAAAACCCCAACCAAATTAGGAGAAAAACAGCGATGAAAGCTGCGGAGGAGAAGCTAATGAAAAAAAGGCTTTGAGAAGGAGCTGTAAAACTATGCTTGAACATTATTTCCATCCAAATTTATGGGAGAAATTTCTCAAAACTCAAGGCTATGAGCTTGAATAAACTTGTCACATTCTTGAAATGAAGAATAGATCTTCAAAATAAGAGTCCTCAACTACAATATCATCACTCTTGTTTTCTATGGGCAGCAAGGTAGACTCCACACTGTTCATGCTGACAATTGATTCAACATCTAACTTATCCTCACAACATGAGGGAGAATGAGAAGAAGTAGGGTCTTTTTATAGAAATAATGACTCATTTGATGAGGACAAAATCAAAATTTGTTGGTGGAGAACTTATTAGCTGCCATGGCTGGAGATTCATCAAAGGGCGTCTCAATGGGTCATTGGTTTAGTTGGTCCATAGATGTCGTACATTGGAACCCATGGTTATGGAACCATCAAACAAACTTCAATGTGACTAGAAAAGACATGCTCATTCCAACATGTCTTCTAGTCGGTGTTTTATGTTGCGTAAGTAGTGTCAAGAATCATACCGAATGATTTCATTGTCCTTTTTTTGATAAAATGTGTGGCCCCTTTTTGTCCTCCAGAAATATCTTTTATGTAAGGAATCTGAGTAGTAGTTATGAGGGCAAGAGAATCTAGGGAATTGGTTACTATTTTTTTTTTAATAAGATAGTAAAAAGGGGTGGAAGGAAGGCTACTGGGGGAGTGATTAGCTGGAGGGAAGTGGTGCAATGATTAGCTGCAGGGAAGAGGTGCTCTTGAATTTTCCCTTTTGTTTTGTACACATTGATATTTAATACTATTCAACTTGATTCATACATAAACATATGTAAGTCTTTCTTTCTCTATTTTCAATGAGAAACACATCGTCATTGTTATTTTAGCTTTTGTCATAAACTAGTTCATGTTTTCCAATGGAAATTCACTTGGCTTAATTTTCTAAATTGTTTTCTTTGATAAGTTATTGTTTTTGTGTTTAATCGTTTTTCCAGGGTTATTGCAACTGCTATTACATATATGAGACGTGTTTATACCAGGTATAGTAGAATTCTGTCGCAGAATGGAAAAATTCATCAAGCCATTGACTCTTATCTGTTGTTTTAGTTTGAGATCAATCTCGAATTTTGTAATCAGAAATGGTCTCAAGTACACTGAGGTTTTAATGTTTACATATATCTCTTCCAAGATGAGGAAAGAGAGCCGATCTTGTCCTTCAATATCTATCCTTAACATTTTGTTTGAGAAGAGTCATGAAAATAAAGCATACAGAATTTGTTAATCTAAATATTACATCGCCATCAACATGTGAAATCTGTGAGTCTAGCTCATGCAATTGTTGCTACACGGCACTAGGGGTCTTTCCTTCTTTGTAGTTGAATCTACGCTAAGAAACAAAACTATTTAACTCTTTTACATTTGAATTCATGCTGTCATTGAGAAGGAATAGAAGAATGTAAAGGAAAACAAAAAGACAGCCCCAAAAAAGGAGCCAAACTATCAGATCATATATCAATTAGAAAATAGACAGAATGAGGATGAGATTAATAAAAAGCCTCGTCCTTACCTGCACAGAAAAGATTATGTTGTTAGCTAACAAGAGATAGGATAAGAGAAGCTTATCTCTTCCTGCCTGAAATTCTTGAAGAAGGTTGTTCTCTACCCTTGAAACCAAACTACTCAAAATATTTTCCACTTGAAAAAACGGGTAAGAGAGAGGATTACCTTGTCTCAAACTCCTCGATGCACAAATCTACCTCTATGGACTTGATACATCTCGAGATCCAAGATCTCCATTTGTAGCCAAAATTTTTCTTCCAAAAAATCCTGATCCACATGATCATAAGTTTTTTCAAAATCGACCTTAAAGATCAATTCTTCATGCTTACAACTTCCATAATCCTCAATGGCCTTGTTGACAATAATAGCCTAGTCCAAAATTTGTCTACATCTATAAAGGCCCTTTGGAACTTGGATATTGTCTTAGGGAGAATCTCCTTATTTTGTTTTAACAAAGTACAAAACTTCTCATTGATGAAATAAAAAGAGACTAATGCTCAAACTTACCTGGGAGTGAAAATAAGAGCATAAAGCTCATCACAAAGGGAAAACAAAATTAAGATCAATACCTAACAAAGAAAAGCACTTGGATTGAGAACACAATGAAGAAGCTTTCAAACTAGCAAAATCAAAGCTGGCAGCTCAAGGAAGAAACTTATCCTTAAAGAATCTCAAATTCCAACCATAGATCCAACAGGAGCTTTGATCGCATTAGATCATAATAAAAGGGACATTGAAGCCAATGAATATTGACCTTCAAATCGGAGGAGAATACCTTAGATTCGTTGAACATAGAGAGAAACTTGTGTCAACACTTATGGACACTGATCACTATACTAATAGGTCTAAAATTCTTCACCCTTGCCCAATTTTTCTTCTTGGGCACGAGACAGTCAGAGGTCTCATTCAGGAATTTGTTTAGAATTCCTTTCTCATAGAAGAAAGAAAAAGAAAAAGAAAAGAAAAACCCTTTTCATAGACCATCCTCAATAAAACCCAATTACTGCAAATAACTTGGGAGGGGAGCACTGGTTTAATTGGAATGTTTTTATCTTTCTTTTAAGATGTTCTTGTTTGCACTTTCTTTTTGTTATCTGTTCAGTCCCTTACAGATTTTGTATTTTTGGGCATTAGTCTCTTCTCATTTCATCAATGAATTTTTTTGTTTATTGTTCATAAAACATTCTCAATCATCCTAAAAAAAAGGCCACCGTAAAACCATTTGAACCTAGGGTTTTCATTCCTATCAAACCCAAAAACCACCCTTCTTAATATTTGGGAGATTTGACATGGTATCATAGTAGGATGTCTTGAGTTTGAATCCCTGTAATGTCATTTTCTTCCCAATCAATATTGATTTCTACTTGTTGGATTGTTGATATATTTAAATTTACCATAACCCATCAGCTTAAGCTTGTGGGTTGATTAATAATTTAACAAGGGTCAATAATCAATAGGTGGACTACATACTCTTGACCTTCCAACACTTGCTTGATTTAATGTCTCACTTTGGGCAACATTTTTCTTTTGAATTGGAGCCCTCTCTTGTTTCATTAGGTTTGTTCCTGTTTTGCTTCTTTTTTAGGTTACTGTTTGTTTGTTTTAGCTGGTTCTTTTGTCATTTTTCTCGATTGAAGGTCAGTTTCTCAATTAAAATAAAAAATTCATTGAATATTTATTATAGAAAATATTTCTTTCGACCTCTTTTCATTATTCTCTTTTCATCTTTCTTCTTTTTGCTAATTTTATTTCTGTGATGATAGACAACTCTTTTAGCTACTTCAAGAATCGTTCCAAACTATTTTTTACTACTAGCAACTCTCTGTTCAATTTATTTTAGTGAGAATTCTGATTAACGGACAAATTCATTCTTTTCTCTTGTTATTTCCATTTTTTCTTAATTCAATAGCTTTTCTGTTTAATATAGTGCATAAATCTCTCTCAGTTTTTCATGAAGTGCATTAATGCAGTTGTTTGTAATTGACTCTTTTTAGAAAGAGTATGACAGAATATGATCCACGATTAGTGACCCCAGCCTGCCTACATTTGGCTTCAAAAGCAGAAGAAAGCACGGTGCAAGCTAGACTCCTGGTCTTTTACCTTAAAAAAATACGTAATCATTTACTCTTTTAGTATACTACACTATTATTTGCTTCCGCTCATTAAAAGATGCCCTGGGTACTGGTGGCATGTGAAATAGTTAATATCTTTGGTTCTTGCCTTACAGAGTCTGATGATAAACATAAGTATGAGATTAAACACATACTGGAAATGGAAATGAAGATTTTAGAAGCCCTCGACTATTATTTGGTGGTATTCCACCCTTATCGAGCTTTGTCTCAGTAAGTAATTTAATTCACACTTGCATTATGTATTTTTATTCTTTCCGAAAAGGAAGCATAACTTTTTAATTTTTTGAAAAGAAATTAGAAAAGAAAAGGTTAAATTACAAATTTGGTCTTGAAAACTTGTAGGAGTGTCTATGGGTCTCCATACTTTTGTTGTTGTGTCTAATAACATTGAGTGTTAAAAAGTGTCTATTAGAGTTCTTAAACTTGGATTTTGTGTCAAATAGGTCCTAGGTCAACATGATATCCTCTCAAAGAGTTATCTTCGACTCTATGGTTGAGAGTTTGTGTATGTATTTATTTAGCTTCCATTGAGAGGGGTCGATGTACCCTCTTCCTTTCTTTTCTTTCTAATTATCACTTTTGTTTATTCCGTTTGCTGTATATAGCTGATCTCTTTAGGTGTGAAAAATATATTAGCATAAAGAGCAACTCTTATTAATGTATCTTCTGTTTACGGGTGTTTTTTTAAGTTAGTTTAAAGTTGTTAGGTTAGTTAAGAGCTGGTTGGTTTGTTATGGCCGTTTTTAGCCGATTAAACTTAACATCCTAGCTGCTTTGGGCTGATCATTGAATAATAAAATAACCCCTTTGAAGTTTTACATTAAGGTCATTGATTCAAATCACCCCACCCTCATTTGTGATAGTATTCTAATATGTATATATGTGTATATAAGTCAAAAGAAGCTTGGTAACCCAAAAGGGTTCTTGGAAATTACCCCACGTTACCTAGAAAAGAAAATTAATGCTTTACAAATGGGAAAGACAAATTGTAGTCTACAAAGAAACATCTCCAAACCAAACCTGTTAGAGAAAACCTACTTTCAACCTTGATTTCTTTGGTTTATACTAATCCTTCTTGTGCTTTTTGTTAAGTTTTGGTTTCTATTTGCCTTTGATCTATATTTAGAATCCGTATGTCTAAATTTCATATACCCTAATCCCTCTCTCTCTCTCCCCCTTCCCCCTGCCCCAAAAAAATAAAATGGCAGGTTGCTCCCAGATGCAGGCCTGAATGACATAAGTATGACTCAATTGACTTGGTAAGGGCATATGATAGATGCATTATTTAAAAAACTTCTGCTTGTCTTTCAACTCTTCTTTTTCTTGTCATACTTTGTTTCAAAGTTGATAAAAGTTCGAGCATAAAAGCTTGTACATTAGTGAATTTTTGTGTATGTAACTTATCAGAACCTTTTCCTTCTATTACGAATAAGTAAAAGTCATTTGTTACAAATGCATGAAAATGAACACATTATTAAAAAGTACAAGGACTACGTCATTGGTTTCGGGCAGTTTTATTAATAATTTTGTCTGTAAGTATGTTTTTTTGCTCATCTACCTGTTGTATTTTTTTATAACGGGAATAGTATTTCGTATGCAATCAGCCTTATCTTTCCAAATGTAATTTATACATTTTCCAGCTGTCATGCATGTGGTTTCTACAGCAATGTCCTTGAAGTTTGATATTTTGTATTATTTAACACAGCTAATTCCAAGAAAATGTAATGATTGCGTTCCAATTGTATAGGGGGCTTGTGAACGACACCTACAAGATGGATCTACTTCTTGTACATCCACCCTATTTGATAGCTTTGGCTTGCATATATATTGCTAGCGTACTAAGAGAGAAGGACACAACTGCATGGTTTGAAGAACTTCATGTTGATATGAACGTGGTGAGTCTATCGAGAGCTAAATTTCTTCCCAAGTTTTAATTGTGAATGTGGTGAGTCAATTGACTTTCTGTTGTCAGAACCACGTGTTGAGTTTGTTGTCTGTTGTAGTTAGTTGAGAGAGATATTTTTTCCTATCATTTACAACTAAGGATTATACCTTGATAAATAAATAAATAAAAAGAAGAAGAACAAAAAAGGCTGAAAAGGTTAACAAATCTAATTAGTCCTATACTTCAGAGATCAAAGACTGTCATGAAAAAAAATAACAAATCTAACTTCCTAAGATGCTATTTACAAGAATGCTATTAACTTCTTCAACATCCAACTTGTTATTCAAGTCTTCAAAATTAGGTCAATAAAAAGAGCCAGTCCTTTCAATGTGAAGTGTGTCAACTCTCAAACACACACGCTCTCATCTTTCTCCTTATTTGTATACACCCTCCACACCTTTCTCCATTATTCGTGGCAGTATTTGGGACCTTCAAGGGTAAAGAATGTCATTGGGGCACGATGGTTCCGACTCTCACACTCATTTCAGCTGAACATTTCTTATGAAAGATAAAATCAGAGACTTGCTTGTTATTCCAAGTCTTTCATAAAATGATCCCAAATTAGTTTCAAGTCAACATCAAAGTACTTAAAACTGTTAATGCTGCTTGTTATTCCAAGTCTTTCATTCTCATGCCATTGTTCATCAAAACTCTTATGTTGTTGAGACACCCCAACAAATGGTGTGGTTGAATGCAAAAATCGTCATCCTGATTTAGCCTGTTCTTTAATGTTCACTTCACATGTTCCGAAAGTTTATTTGGGAGAAGTCATTCTAACGGCCACATATCTCCTAAATTGTATGCCCTCTCGAATTCTTGGCTTCAACGCACCCTTACAAAGCTGCTTACTCTATATCCTACATCTCATCTTTGTCTTAACTACCACTAAAATTATTTGGGTGTATAGTTTTAACTAATATCTAACCATGGAAAACTTGATGATGATCCATGAAATGCATCTTTCTAGGGTACTCACACCTTACAAGAAGGATACTAATGCTATTATCCTCCAACTTGCCAATTTTTCCATACCATGTATGTCACCTTTTTTGAAAATCCCCTATTTTCTTTTTTGCAATCTTGTACTTCATGATATGAATCTCAAAATTAGGACTGCATTCCTCAATTCCCTTCATGCACACCTATATATTCTTATTATGATGAAGTAGATATCCTTACTATGATCAAGTCTTTTATATATCACAATCAGCTCAAAATCGAGAATCTAATCCTTCTTTGAGCTAGCTTCTTTGAGAATCTAACCCTAAACCCTAAACCAGGGACAGTAGAAGATGAAAAACGCCATTGCTATAAGGAAAGATGTTCGCTTATGTACTGAACATCCTATTTAGTATCACTTTTCTTATAATAATTGTCATCCTTTTTAGAGATTTTGTAATGCCTTTAGATCAAATACAAACTCTTAACACGGTTGAAGAAGCTTTACAAAGACCTTAATGAGAAACAACTGCTTGGAGTTGCAAGCGCTTGAAAAGAACGAAATGTGGATCCTCAACAAATTTTCCCTTTGGCAAGCGCACTGTTGAATACTATCAAGAAACTTTTGCTCAAGTTGCCAAGTTTAATATTGTTTGGCTACTTTCTTCTGTTGTACCAAATCTAGTTTGGTCTCTATTTCAATAAGAGGTGAAAAATGCATTTCTGAATGGCGATCTAGTAGAAGTATATATGGATATACTTCATGGATTTGAGGAAAAATATACCAAGGGAGAGGTATGTAAACTCGAGAAATCTTTTTATAGGCTAAAACAATTCCCTCGAGCTTGCTTGAAAGGCTTACTAATGTTTTGAAGCAAAATGATTCTTTAATTGTAAGGTAGAGAATCTACCTTTTTCAGTATCTTGGTCTTCCTTTAGCGGGTTATCCTAAGTTGGTAGCTTTGTGGCGTTGGGTGATAGATGAAATTCTTAATAGTCAATGAAGCTTAATTGTAAGGTGTTAAGTCGCTTACCTTTCTCAGTATCTTGGTCTTCCTTTAGCTGGTTATTCTAAGTTGGCATCTTTGTGGCATTCAGTGATAGATAAAATTCTTAAGTAGCTCGATAGATGGATGCATTTTTATTTCTCACGTGATAGTCCATGGATTGGCATCTTTGTGGCATCCAATGATAGTCCTTGGATAGGCGTCTTTGTGGCATCCAGTGATAGTCCATAGATTAGCATCTCCAAATCTTGGAAACGATTTGATTCCTATGCCTCTTGCAAATTAGGCAATGGTAAACGTATATTGTTTTAGCAGGACCTTCGGATTGGGGATTCTCGTTTAAAGATTTGTTTTCCTTAACTATTTGCCATCTCCTCATCTTGAAGTGGTTCGGTCTCCCTTGGTTTGAACGTTTGAATCTGCAAAGATTACCTGTCCCAACTATTTTTTCTTTTTTAGTAGGAGCCATCAACAGTTTTCACGGAGGAATTGGAGGTAGTCGGTAGTTTTGAAACAAGGCTGCATTTATATTCATTAAATATGATGTTCCAGAAGTCTACAATCCAGAGCTTCACTTCTTTGCTAGAAAGGCAATAGACGTATTCTAATGTGTCATCAATCGTGCTGTTTTGACATAATATATGATAAAATATTAAATAGGAGTATGTACATCCGTAGTACTAGTAAATTTTTCTATAAGAATGTTCATCTTGTTGCTGATATAGTCATTCTCGAAATGAAACTCATTCTTTTGAAATCATGATAGTTAAAATTTCTTTTCTTGCAGGTCAAGAATATCTCTATTGAGATATTGGATTTCTACGAAAACCACCGAATGATTACTGAAGAGAGAATTCTTTCGGCTCTGAACAAGCTATCTATGAAGCCATGAATGTGAAACAATTTCCAGTTCCTATCATAGATCGTGTAAGTGATGATATCCGCCTTTTTATCTATTATGGTAATGTGCTAATATATATTATTCTAGAATATAATTTTAGGAACTTGTGGGTGTAAAATATTGTGCATGGATATTTCTTAGCCTTTGCAAACTTGGTCAAGGAAAAGGTGTTACATTTGAACAAGGAAAAGATGTTACATTTGAACAAGGAAAAGAGATGTACCCATTGAAGGGGATTTTATGTTTGAAACAATATAGAGCGGTATACTAATAAACTAAAACGTGTAAGGAGAACTTTAGGAATGGTCATA

mRNA sequence

TGGAGTCAAAAACCTAAGTTTTGTAGATCTAAATTCACTAATATAATTATATAAATGTGGTAAACAATCTAATCCTTCAATGAAATTGATTTTTTTAACCATACAAGTTCGAAGCTTTAGGTCTACAAAATCTCCCTCCTTCACCCAACAGTTGGTCGAGAAAAAAGTTGATTAAAGTCGGCTATTTAATTATTAATTAATTATTTTAATTCAACTATCGGTAACGAATCGGCAGGAAGTTGCTGCAATCGTCGAACACCGACTACTATAAAACTCCTTGCGGTGGCGGACAGCCAAAACTTGGCAAATTTGTTTCAAGCATGGCTGCTAATTTCTGGACTTCATCGCACTACAAACAACTCATGGACCAAGAGGAGGTCGATGTGGTGCAATCGCTCGATAAAGATAGGGGCATTACTCTCGAGGACTTCAAGCTCATTAAGATGCACATGGCCAATTATATACTGAAGTTGGCTCAACATGTGAAAGTTAGACAAAGGGTTATTGCAACTGCTATTACATATATGAGACGTGTTTATACCAGAAAGAGTATGACAGAATATGATCCACGATTAGTGACCCCAGCCTGCCTACATTTGGCTTCAAAAGCAGAAGAAAGCACGGTGCAAGCTAGACTCCTGGTCTTTTACCTTAAAAAAATACCTGATCTCTTTAGGTTGCTCCCAGATGCAGGCCTGAATGACATAAGTATGACTCAATTGACTTGGGGGCTTGTGAACGACACCTACAAGATGGATCTACTTCTTGTACATCCACCCTATTTGATAGCTTTGGCTTGCATATATATTGCTAGCGTACTAAGAGAGAAGGACACAACTGCATGGTTTGAAGAACTTCATGTTGATATGAACGTGGTCAAGAATATCTCTATTGAGATATTGGATTTCTACGAAAACCACCGAATGATTACTGAAGAGAGAATTCTTTCGGCTCTGAACAAGCTATCTATGAAGCCATGAATGTGAAACAATTTCCAGTTCCTATCATAGATCGTGTAAGTGATGATATCCGCCTTTTTATCTATTATGGTAATGTGCTAATATATATTATTCTAGAATATAATTTTAGGAACTTGTGGGTGTAAAATATTGTGCATGGATATTTCTTAGCCTTTGCAAACTTGGTCAAGGAAAAGGTGTTACATTTGAACAAGGAAAAGATGTTACATTTGAACAAGGAAAAGAGATGTACCCATTGAAGGGGATTTTATGTTTGAAACAATATAGAGCGGTATACTAATAAACTAAAACGTGTAAGGAGAACTTTAGGAATGGTCATA

Coding sequence (CDS)

ATGGCTGCTAATTTCTGGACTTCATCGCACTACAAACAACTCATGGACCAAGAGGAGGTCGATGTGGTGCAATCGCTCGATAAAGATAGGGGCATTACTCTCGAGGACTTCAAGCTCATTAAGATGCACATGGCCAATTATATACTGAAGTTGGCTCAACATGTGAAAGTTAGACAAAGGGTTATTGCAACTGCTATTACATATATGAGACGTGTTTATACCAGAAAGAGTATGACAGAATATGATCCACGATTAGTGACCCCAGCCTGCCTACATTTGGCTTCAAAAGCAGAAGAAAGCACGGTGCAAGCTAGACTCCTGGTCTTTTACCTTAAAAAAATACCTGATCTCTTTAGGTTGCTCCCAGATGCAGGCCTGAATGACATAAGTATGACTCAATTGACTTGGGGGCTTGTGAACGACACCTACAAGATGGATCTACTTCTTGTACATCCACCCTATTTGATAGCTTTGGCTTGCATATATATTGCTAGCGTACTAAGAGAGAAGGACACAACTGCATGGTTTGAAGAACTTCATGTTGATATGAACGTGGTCAAGAATATCTCTATTGAGATATTGGATTTCTACGAAAACCACCGAATGATTACTGAAGAGAGAATTCTTTCGGCTCTGAACAAGCTATCTATGAAGCCATGA

Protein sequence

MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQRVIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKIPDLFRLLPDAGLNDISMTQLTWGLVNDTYKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRMITEERILSALNKLSMKP
BLAST of Cp4.1LG05g15560 vs. Swiss-Prot
Match: CCC11_ARATH (Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYCC1-1 PE=2 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 114/255 (44.71%), Postives = 152/255 (59.61%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRG-----------------ITLEDFKLIKMH 60
           MAANFW SSHYKQL+D EEVDVV  LDK+RG                 + L     ++  
Sbjct: 1   MAANFWNSSHYKQLLDPEEVDVVHDLDKERGISIDDFKLIKFHMSNHIMKLAQHIKVRQR 60

Query: 61  MANYILKLAQHVKVRQ-------RVIATAITYM-----RRVYTRKSMTEYDPRLVTPA-- 120
           +    +   + V +R+       R++A    Y+       +   +++  Y  RL      
Sbjct: 61  VVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYN 120

Query: 121 ------CLHLASKAEESTVQARLLVFYLKKIPDLFRLLPDAGLNDISMTQLTWGLVNDTY 180
                  L +  K  E+ +   L+VF+  +   L   L DA LND++M Q+TWG+VNDTY
Sbjct: 121 KYELKDILGMEMKVLEA-LDYYLVVFHPYR--SLSEFLQDAALNDVNMNQITWGIVNDTY 180

Query: 181 KMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRMI 219
           KMDL+LVHPPY IALACIYIASV REKD TAWFE+LH DMN+VKNI++EILDFYEN+R I
Sbjct: 181 KMDLILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTI 240

BLAST of Cp4.1LG05g15560 vs. Swiss-Prot
Match: CCC11_ORYSJ (Cyclin-C1-1 OS=Oryza sativa subsp. japonica GN=Os09g0504400 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MAANFWTSSH KQL+DQE+VD V   D DRGITLE+F+L+K+HM+ +I +LAQ VKVRQR
Sbjct: 1   MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITLEEFRLVKIHMSFHIWRLAQQVKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKI 115
           VIATA+TY RRVYTRKSMTEYDPRLV P CL+LASK EESTVQARLLVFY+KK+
Sbjct: 61  VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKM 114

BLAST of Cp4.1LG05g15560 vs. Swiss-Prot
Match: CCC12_ARATH (Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-43
Identity = 109/257 (42.41%), Postives = 145/257 (56.42%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRG-----------------ITLEDFKLIKMH 60
           MA+NFWTS+HYK+L D EEV+VV  LD  RG                   L     I+  
Sbjct: 1   MASNFWTSTHYKELKDPEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQR 60

Query: 61  MANYILKLAQHVKVRQ-------RVIATAITYMRR-------------VYTRKSMTEYDP 120
           +    +   + V  R+       R++A    Y+                Y +K   +   
Sbjct: 61  VVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKF 120

Query: 121 RLVTPACLHLASKAEESTVQARLLVFY-LKKIPDLFRLLPDAGLNDISMTQLTWGLVNDT 180
           R      L +  K  E+ +   L+VF+  + +P+    L D+G+ND SMT LTWGLVNDT
Sbjct: 121 RYEIKDILEMEMKVLEA-LNFYLVVFHPYRSLPEF---LQDSGINDTSMTHLTWGLVNDT 180

Query: 181 YKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRM 220
           Y+MDL+L+HPP+LI LACIYIASV +EKD   WFEEL VDMN+VKNI++EILDFYENHR+
Sbjct: 181 YRMDLILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRL 240

BLAST of Cp4.1LG05g15560 vs. Swiss-Prot
Match: CCNC_XENLA (Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22
Identity = 79/263 (30.04%), Postives = 135/263 (51.33%), Query Frame = 1

Query: 1   MAANFWTSSHYKQ-LMDQEEVDVVQSLDKD-RGITLEDFKLIKMHMANYILKLAQHVKVR 60
           MA NFW SSHY Q ++D++  D+++   KD + ++ E++  +++   N I  L +H+K+R
Sbjct: 1   MAGNFWQSSHYLQWILDKQ--DLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLR 60

Query: 61  QRVIATAITY-------------------MRRVYTRKSMTEY----DPRLVTPACLHLAS 120
           Q+VIATA  Y                      V+    + E+    + RL++ A   L +
Sbjct: 61  QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKT 120

Query: 121 K-----AEESTVQARLLV---FYLKKIPD-----------LFRLLPDAGLNDISMTQLTW 180
           +      +E   +   ++   FYL ++ D           L + + D G  D+ +  L W
Sbjct: 121 RFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAW 180

Query: 181 GLVNDTYKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDF 220
            +VNDTY+ DL L++PP++IALAC+++A V+++KD   WF EL VDM  +  I   IL  
Sbjct: 181 RIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKL 240

BLAST of Cp4.1LG05g15560 vs. Swiss-Prot
Match: CCNC_XENTR (Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.4e-22
Identity = 79/263 (30.04%), Postives = 134/263 (50.95%), Query Frame = 1

Query: 1   MAANFWTSSHYKQ-LMDQEEVDVVQSLDKD-RGITLEDFKLIKMHMANYILKLAQHVKVR 60
           MA NFW SSHY Q ++D++  D+++   KD + ++ E++  +++   N I  L +H+K+R
Sbjct: 1   MAGNFWQSSHYLQWILDKQ--DLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLR 60

Query: 61  QRVIATAITY-------------------MRRVYTRKSMTEY----DPRLVTPACLHLAS 120
           Q+VIATA  Y                      V+    + E+    + RL++ A   L +
Sbjct: 61  QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKT 120

Query: 121 K-----AEESTVQARLLV---FYLKKIPD-----------LFRLLPDAGLNDISMTQLTW 180
           +      +E   +   ++   FYL ++ D           L + + D G  D+ +  L W
Sbjct: 121 RFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAW 180

Query: 181 GLVNDTYKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDF 220
            +VNDTY+ DL L++PP++IALAC+++A V+++KD   WF EL VDM  +  I   IL  
Sbjct: 181 RIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKL 240

BLAST of Cp4.1LG05g15560 vs. TrEMBL
Match: A0A022RGU2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022737mg PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.5e-85
Identity = 162/229 (70.74%), Postives = 197/229 (86.03%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MA NFWTS+HYKQL+D E+VDVV  LDKDRG+TLEDFKLIK+HMANYI +LAQ+VKVRQR
Sbjct: 1   MATNFWTSTHYKQLLDPEDVDVVHQLDKDRGMTLEDFKLIKLHMANYIARLAQNVKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKK------- 120
           V+ATAITYMRRV+ R+SM+EYDPRLV PACL+LASKAEESTVQARLLVFY+KK       
Sbjct: 61  VVATAITYMRRVFARRSMSEYDPRLVAPACLYLASKAEESTVQARLLVFYIKKLYSDEKY 120

Query: 121 ------IPDLFRLLPDAGLNDISMTQLTWGLVNDTYKMDLLLVHPPYLIALACIYIASVL 180
                 I ++  LL DAG+ND   TQLTWGLVNDTYKMDL+L +PP+LIALAC+YIASV 
Sbjct: 121 RYEIKEILEMEMLLQDAGMND--ATQLTWGLVNDTYKMDLILTYPPHLIALACLYIASVQ 180

Query: 181 REKDTTAWFEELHVDMNVVKNISIEILDFYENHRMITEERILSALNKLS 217
           ++K+ TAWFEEL VDMNVVKNI++EILDFY++H++IT+ER+ +A+NK++
Sbjct: 181 KDKENTAWFEELRVDMNVVKNIAMEILDFYDSHKLITDERVNAAMNKVA 227

BLAST of Cp4.1LG05g15560 vs. TrEMBL
Match: A0A078IM98_BRANA (BnaA02g30360D protein OS=Brassica napus GN=BnaA02g30360D PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.1e-84
Identity = 161/251 (64.14%), Postives = 197/251 (78.49%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MAANFWTSSHYKQLM+QEEVDVV  LDK+RGI++EDFKLIK HM+N+++KLAQH+KVRQR
Sbjct: 1   MAANFWTSSHYKQLMEQEEVDVVHPLDKERGISVEDFKLIKFHMSNHMIKLAQHIKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKI-PD--- 120
           V+ATA+TYMRRVYTRKSM E++PRLV  AC++LASKAEES VQAR ++FY++K+ PD   
Sbjct: 61  VVATAVTYMRRVYTRKSMVEFEPRLVALACMYLASKAEESIVQARNIIFYIRKLYPDEYK 120

Query: 121 ----------------------------LFRLLPDAGLNDISMTQLTWGLVNDTYKMDLL 180
                                       L   L DA +ND++M Q+TWG+VNDTYKMDL+
Sbjct: 121 YELKDVLGMEMKVLEALNYYLVFHPYRSLSEFLQDAAINDVNMNQITWGIVNDTYKMDLI 180

Query: 181 LVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRMITEERI 220
           LVHPPY IALACIYIASV  EKD TAWFE+LH DMN+VKNI++EILDFYEN+R ITEE++
Sbjct: 181 LVHPPYRIALACIYIASVHTEKDITAWFEDLHEDMNLVKNIAMEILDFYENYRSITEEKV 240

BLAST of Cp4.1LG05g15560 vs. TrEMBL
Match: A0A103Y775_CYNCS (Cyclin C OS=Cynara cardunculus var. scolymus GN=Ccrd_017905 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 151/218 (69.27%), Postives = 189/218 (86.70%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MA NFWTS+HYK+L+DQEEVDVV ++DK+RGITL+DFKLIK+HM NYI +LAQ+VKVRQR
Sbjct: 1   MATNFWTSTHYKELLDQEEVDVVHNVDKERGITLDDFKLIKLHMTNYIARLAQNVKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKIPDLFRL 120
           VIATA+TYMRRVY R+SM+E+DPRLV P+CL+LASK+EESTVQARLLV           L
Sbjct: 61  VIATAVTYMRRVYIRRSMSEFDPRLVAPSCLYLASKSEESTVQARLLV-----------L 120

Query: 121 LPDAGLNDISMTQLTWGLVNDTYKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELH 180
           + DAG+++   TQLTWGLVNDTYK DL+LVHPPYLI LACIY+ASVL+EK+ TAWFE+L 
Sbjct: 121 VQDAGMSE--ATQLTWGLVNDTYKTDLILVHPPYLIGLACIYVASVLKEKENTAWFEDLR 180

Query: 181 VDMNVVKNISIEILDFYENHRMITEERILSALNKLSMK 219
           VDMNVVKNI++EILDFY+ H+ I++ER+ +A++KL ++
Sbjct: 181 VDMNVVKNIAMEILDFYDTHKTISDERVTAAMHKLPIR 205

BLAST of Cp4.1LG05g15560 vs. TrEMBL
Match: R0EU76_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027517mg PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.2e-73
Identity = 146/254 (57.48%), Postives = 182/254 (71.65%), Query Frame = 1

Query: 1   MAANFWTSSHY----------------KQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHM 60
           MA+NFWTS+HY                K+L D EE++VV  +D  RGI++EDF+LIK+HM
Sbjct: 1   MASNFWTSTHYFYVFLIDSCSGFYSYSKELKDPEEINVVNPIDAQRGISVEDFRLIKLHM 60

Query: 61  ANYILKLAQHVKVRQRVIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQ- 120
           +NYI KLAQH+K+RQRV+ATA+TYMRRVYTRKS+TEY+PRLV P CL+LA KAEE+  + 
Sbjct: 61  SNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEENADEK 120

Query: 121 ---------------ARLLVFYL------KKIPDLFRLLPDAGLNDISMTQLTWGLVNDT 180
                             L FYL      + +P+    L D+G+ND SMT LTWGLVNDT
Sbjct: 121 FRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEF---LQDSGINDTSMTHLTWGLVNDT 180

Query: 181 YKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRM 217
           Y+MDL+L+HPP+LI LACIYIASV REKD   WFEEL VDMN+VKNI++EILDFYE HR+
Sbjct: 181 YRMDLILIHPPFLITLACIYIASVHREKDIRTWFEELSVDMNIVKNIAMEILDFYEKHRL 240

BLAST of Cp4.1LG05g15560 vs. TrEMBL
Match: A0A0E0M320_ORYPU (Uncharacterized protein OS=Oryza punctata PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 147/241 (61.00%), Postives = 183/241 (75.93%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MAANFWTSSH KQL+DQE+VD V   D DRGIT E+F+L+K+HM+ +I +LAQ VKVRQR
Sbjct: 1   MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITPEEFRLVKIHMSFHIWRLAQQVKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKI---PDL 120
           VIATA+TY RRVYTRKSMTEYDPRLV P CL+LASK EESTVQARLLVFY+KK+    + 
Sbjct: 61  VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASDEK 120

Query: 121 FRL-LPDAGLNDISMTQ--------------LTWGLVNDTYKMDLLLVHPPYLIALACIY 180
           +R  + D    ++ + +              L  G+VNDTYKMDL+L+HPPY+IALACIY
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQGIVNDTYKMDLILIHPPYMIALACIY 180

Query: 181 IASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRM-----ITEERILSALNKLSM 219
           IASVL++KDTT WFEEL VDMN+VKNIS+EILDFY+ +++     + E++I   +NKL  
Sbjct: 181 IASVLKDKDTTLWFEELRVDMNIVKNISMEILDFYDTYKIDPQRGLPEDKIAPVMNKLPS 240

BLAST of Cp4.1LG05g15560 vs. TAIR10
Match: AT5G48640.1 (AT5G48640.1 Cyclin family protein)

HSP 1 Score: 188.0 bits (476), Expect = 6.4e-48
Identity = 114/255 (44.71%), Postives = 152/255 (59.61%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRG-----------------ITLEDFKLIKMH 60
           MAANFW SSHYKQL+D EEVDVV  LDK+RG                 + L     ++  
Sbjct: 1   MAANFWNSSHYKQLLDPEEVDVVHDLDKERGISIDDFKLIKFHMSNHIMKLAQHIKVRQR 60

Query: 61  MANYILKLAQHVKVRQ-------RVIATAITYM-----RRVYTRKSMTEYDPRLVTPA-- 120
           +    +   + V +R+       R++A    Y+       +   +++  Y  RL      
Sbjct: 61  VVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYN 120

Query: 121 ------CLHLASKAEESTVQARLLVFYLKKIPDLFRLLPDAGLNDISMTQLTWGLVNDTY 180
                  L +  K  E+ +   L+VF+  +   L   L DA LND++M Q+TWG+VNDTY
Sbjct: 121 KYELKDILGMEMKVLEA-LDYYLVVFHPYR--SLSEFLQDAALNDVNMNQITWGIVNDTY 180

Query: 181 KMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRMI 219
           KMDL+LVHPPY IALACIYIASV REKD TAWFE+LH DMN+VKNI++EILDFYEN+R I
Sbjct: 181 KMDLILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTI 240

BLAST of Cp4.1LG05g15560 vs. TAIR10
Match: AT5G48630.2 (AT5G48630.2 Cyclin family protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 101/248 (40.73%), Postives = 135/248 (54.44%), Query Frame = 1

Query: 10  HYKQLMDQEEVDVVQSLDKDRG-----------------ITLEDFKLIKMHMANYILKLA 69
           H K+L D EEV+VV  LD  RG                   L     I+  +    +   
Sbjct: 13  HSKELKDPEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYM 72

Query: 70  QHVKVRQ-------RVIATAITYMRR-------------VYTRKSMTEYDPRLVTPACLH 129
           + V  R+       R++A    Y+                Y +K   +   R      L 
Sbjct: 73  RRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILE 132

Query: 130 LASKAEESTVQARLLVFY-LKKIPDLFRLLPDAGLNDISMTQLTWGLVNDTYKMDLLLVH 189
           +  K  E+ +   L+VF+  + +P+    L D+G+ND SMT LTWGLVNDTY+MDL+L+H
Sbjct: 133 MEMKVLEA-LNFYLVVFHPYRSLPEF---LQDSGINDTSMTHLTWGLVNDTYRMDLILIH 192

Query: 190 PPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRMITEERILSA 220
           PP+LI LACIYIASV +EKD   WFEEL VDMN+VKNI++EILDFYENHR+ TEER+ +A
Sbjct: 193 PPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEERVHAA 252

BLAST of Cp4.1LG05g15560 vs. TAIR10
Match: AT1G35440.1 (AT1G35440.1 cyclin T1;1)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 1

Query: 31  GITLEDFKLIKMHMANYILKLAQHVKVRQRVIATAITYMRRVYTRKSMTEYDPRLVTPAC 90
           GI L++    +    +++ +L Q +   Q+ IATAI   +R +TR+S+T+ DP+ V   C
Sbjct: 24  GINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIIC 83

Query: 91  LHLASKAEESTVQARLLVFYLKKIPDLFRLLPDAGLND-ISMTQLTW-GLVNDTYKMDLL 150
           + +A K E S   A  +VF   ++  LF   P   + + + MT LT   LV  T + DL 
Sbjct: 84  MFIAGKVEGSPRPAGDVVFVSYRV--LFNKEPLRDVFERLKMTVLTGEKLVLSTLECDLE 143

Query: 151 LVHPPYLI 157
           + HP  L+
Sbjct: 144 IEHPYKLV 149

BLAST of Cp4.1LG05g15560 vs. NCBI nr
Match: gi|604335277|gb|EYU39219.1| (hypothetical protein MIMGU_mgv1a022737mg [Erythranthe guttata])

HSP 1 Score: 323.9 bits (829), Expect = 2.1e-85
Identity = 162/229 (70.74%), Postives = 197/229 (86.03%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MA NFWTS+HYKQL+D E+VDVV  LDKDRG+TLEDFKLIK+HMANYI +LAQ+VKVRQR
Sbjct: 1   MATNFWTSTHYKQLLDPEDVDVVHQLDKDRGMTLEDFKLIKLHMANYIARLAQNVKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKK------- 120
           V+ATAITYMRRV+ R+SM+EYDPRLV PACL+LASKAEESTVQARLLVFY+KK       
Sbjct: 61  VVATAITYMRRVFARRSMSEYDPRLVAPACLYLASKAEESTVQARLLVFYIKKLYSDEKY 120

Query: 121 ------IPDLFRLLPDAGLNDISMTQLTWGLVNDTYKMDLLLVHPPYLIALACIYIASVL 180
                 I ++  LL DAG+ND   TQLTWGLVNDTYKMDL+L +PP+LIALAC+YIASV 
Sbjct: 121 RYEIKEILEMEMLLQDAGMND--ATQLTWGLVNDTYKMDLILTYPPHLIALACLYIASVQ 180

Query: 181 REKDTTAWFEELHVDMNVVKNISIEILDFYENHRMITEERILSALNKLS 217
           ++K+ TAWFEEL VDMNVVKNI++EILDFY++H++IT+ER+ +A+NK++
Sbjct: 181 KDKENTAWFEELRVDMNVVKNIAMEILDFYDSHKLITDERVNAAMNKVA 227

BLAST of Cp4.1LG05g15560 vs. NCBI nr
Match: gi|674881230|emb|CDY51052.1| (BnaA02g30360D [Brassica napus])

HSP 1 Score: 320.1 bits (819), Expect = 3.0e-84
Identity = 161/251 (64.14%), Postives = 197/251 (78.49%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MAANFWTSSHYKQLM+QEEVDVV  LDK+RGI++EDFKLIK HM+N+++KLAQH+KVRQR
Sbjct: 1   MAANFWTSSHYKQLMEQEEVDVVHPLDKERGISVEDFKLIKFHMSNHMIKLAQHIKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKI-PD--- 120
           V+ATA+TYMRRVYTRKSM E++PRLV  AC++LASKAEES VQAR ++FY++K+ PD   
Sbjct: 61  VVATAVTYMRRVYTRKSMVEFEPRLVALACMYLASKAEESIVQARNIIFYIRKLYPDEYK 120

Query: 121 ----------------------------LFRLLPDAGLNDISMTQLTWGLVNDTYKMDLL 180
                                       L   L DA +ND++M Q+TWG+VNDTYKMDL+
Sbjct: 121 YELKDVLGMEMKVLEALNYYLVFHPYRSLSEFLQDAAINDVNMNQITWGIVNDTYKMDLI 180

Query: 181 LVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRMITEERI 220
           LVHPPY IALACIYIASV  EKD TAWFE+LH DMN+VKNI++EILDFYEN+R ITEE++
Sbjct: 181 LVHPPYRIALACIYIASVHTEKDITAWFEDLHEDMNLVKNIAMEILDFYENYRSITEEKV 240

BLAST of Cp4.1LG05g15560 vs. NCBI nr
Match: gi|727645588|ref|XP_010493699.1| (PREDICTED: cyclin-C1-1-like isoform X2 [Camelina sativa])

HSP 1 Score: 319.3 bits (817), Expect = 5.2e-84
Identity = 158/219 (72.15%), Postives = 188/219 (85.84%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MAANFW SSHYKQL+D EEVDVV  LDK+RGI+++DFKLIK HM+N+I+KLAQH+KVRQR
Sbjct: 1   MAANFWNSSHYKQLLDPEEVDVVHDLDKERGISIDDFKLIKFHMSNHIMKLAQHIKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKIPDLFRL 120
           V+ATAITYMRRVY RKSM E++PRLV   CL+LASKAEES VQAR LVF +K +      
Sbjct: 61  VVATAITYMRRVYIRKSMVEFEPRLVAFTCLYLASKAEESIVQARNLVFNIKIL-----Y 120

Query: 121 LPDAGLNDISMTQLTWGLVNDTYKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELH 180
           L DA +ND++M Q+TWG+VNDTYKMDL+LVHPPY IALACIYIASV REKD TAWFE+LH
Sbjct: 121 LQDAAINDVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITAWFEDLH 180

Query: 181 VDMNVVKNISIEILDFYENHRMITEERILSALNKLSMKP 220
            DMN+VKNI +EILDFYEN+R ITEE++ SA +KL++KP
Sbjct: 181 EDMNLVKNIVMEILDFYENYRTITEEKVNSAFSKLALKP 214

BLAST of Cp4.1LG05g15560 vs. NCBI nr
Match: gi|976918618|gb|KVI03789.1| (Cyclin C [Cynara cardunculus var. scolymus])

HSP 1 Score: 307.8 bits (787), Expect = 1.6e-80
Identity = 151/218 (69.27%), Postives = 189/218 (86.70%), Query Frame = 1

Query: 1   MAANFWTSSHYKQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQHVKVRQR 60
           MA NFWTS+HYK+L+DQEEVDVV ++DK+RGITL+DFKLIK+HM NYI +LAQ+VKVRQR
Sbjct: 1   MATNFWTSTHYKELLDQEEVDVVHNVDKERGITLDDFKLIKLHMTNYIARLAQNVKVRQR 60

Query: 61  VIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKIPDLFRL 120
           VIATA+TYMRRVY R+SM+E+DPRLV P+CL+LASK+EESTVQARLLV           L
Sbjct: 61  VIATAVTYMRRVYIRRSMSEFDPRLVAPSCLYLASKSEESTVQARLLV-----------L 120

Query: 121 LPDAGLNDISMTQLTWGLVNDTYKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELH 180
           + DAG+++   TQLTWGLVNDTYK DL+LVHPPYLI LACIY+ASVL+EK+ TAWFE+L 
Sbjct: 121 VQDAGMSE--ATQLTWGLVNDTYKTDLILVHPPYLIGLACIYVASVLKEKENTAWFEDLR 180

Query: 181 VDMNVVKNISIEILDFYENHRMITEERILSALNKLSMK 219
           VDMNVVKNI++EILDFY+ H+ I++ER+ +A++KL ++
Sbjct: 181 VDMNVVKNIAMEILDFYDTHKTISDERVTAAMHKLPIR 205

BLAST of Cp4.1LG05g15560 vs. NCBI nr
Match: gi|565430670|ref|XP_006279729.1| (hypothetical protein CARUB_v10027517mg [Capsella rubella])

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-73
Identity = 146/254 (57.48%), Postives = 182/254 (71.65%), Query Frame = 1

Query: 1   MAANFWTSSHY----------------KQLMDQEEVDVVQSLDKDRGITLEDFKLIKMHM 60
           MA+NFWTS+HY                K+L D EE++VV  +D  RGI++EDF+LIK+HM
Sbjct: 1   MASNFWTSTHYFYVFLIDSCSGFYSYSKELKDPEEINVVNPIDAQRGISVEDFRLIKLHM 60

Query: 61  ANYILKLAQHVKVRQRVIATAITYMRRVYTRKSMTEYDPRLVTPACLHLASKAEESTVQ- 120
           +NYI KLAQH+K+RQRV+ATA+TYMRRVYTRKS+TEY+PRLV P CL+LA KAEE+  + 
Sbjct: 61  SNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEENADEK 120

Query: 121 ---------------ARLLVFYL------KKIPDLFRLLPDAGLNDISMTQLTWGLVNDT 180
                             L FYL      + +P+    L D+G+ND SMT LTWGLVNDT
Sbjct: 121 FRYEIKDILEMEMKILEALNFYLVVFHPYRSLPEF---LQDSGINDTSMTHLTWGLVNDT 180

Query: 181 YKMDLLLVHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRM 217
           Y+MDL+L+HPP+LI LACIYIASV REKD   WFEEL VDMN+VKNI++EILDFYE HR+
Sbjct: 181 YRMDLILIHPPFLITLACIYIASVHREKDIRTWFEELSVDMNIVKNIAMEILDFYEKHRL 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CCC11_ARATH1.1e-4644.71Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYCC1-1 PE=2 SV=2[more]
CCC11_ORYSJ1.5e-4377.19Cyclin-C1-1 OS=Oryza sativa subsp. japonica GN=Os09g0504400 PE=2 SV=1[more]
CCC12_ARATH2.0e-4342.41Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1[more]
CCNC_XENLA5.6e-2230.04Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1[more]
CCNC_XENTR7.4e-2230.04Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A022RGU2_ERYGU1.5e-8570.74Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022737mg PE=3 SV=1[more]
A0A078IM98_BRANA2.1e-8464.14BnaA02g30360D protein OS=Brassica napus GN=BnaA02g30360D PE=3 SV=1[more]
A0A103Y775_CYNCS1.1e-8069.27Cyclin C OS=Cynara cardunculus var. scolymus GN=Ccrd_017905 PE=3 SV=1[more]
R0EU76_9BRAS2.2e-7357.48Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027517mg PE=3 SV=1[more]
A0A0E0M320_ORYPU1.2e-7161.00Uncharacterized protein OS=Oryza punctata PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G48640.16.4e-4844.71 Cyclin family protein[more]
AT5G48630.21.6e-3840.73 Cyclin family protein[more]
AT1G35440.11.4e-0732.81 cyclin T1;1[more]
Match NameE-valueIdentityDescription
gi|604335277|gb|EYU39219.1|2.1e-8570.74hypothetical protein MIMGU_mgv1a022737mg [Erythranthe guttata][more]
gi|674881230|emb|CDY51052.1|3.0e-8464.14BnaA02g30360D [Brassica napus][more]
gi|727645588|ref|XP_010493699.1|5.2e-8472.15PREDICTED: cyclin-C1-1-like isoform X2 [Camelina sativa][more]
gi|976918618|gb|KVI03789.1|1.6e-8069.27Cyclin C [Cynara cardunculus var. scolymus][more]
gi|565430670|ref|XP_006279729.1|3.2e-7357.48hypothetical protein CARUB_v10027517mg [Capsella rubella][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0045859 regulation of protein kinase activity
cellular_component GO:0005575 cellular_component
cellular_component GO:0016592 mediator complex
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g15560.1Cp4.1LG05g15560.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 41..111
score: 1.6
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 130..180
score: 1.6E-5coord: 1..114
score: 4.7
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 115..195
score: 0.0012coord: 46..113
score:
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 4..117
score: 1.02E-22coord: 129..211
score: 9.5
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 1..219
score: 5.5
NoneNo IPR availablePANTHERPTHR10026:SF7CYCLIN-Ccoord: 1..219
score: 5.5

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g15560Wax gourdcpewgoB0954
Cp4.1LG05g15560Bottle gourd (USVL1VR-Ls)cpelsiB597
Cp4.1LG05g15560Watermelon (Charleston Gray)cpewcgB669
Cp4.1LG05g15560Watermelon (97103) v1cpewmB738
Cp4.1LG05g15560Melon (DHL92) v3.5.1cpemeB678
Cp4.1LG05g15560Melon (DHL92) v3.6.1cpemedB810