Cp4.1LG05g13370 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGATTGAAGAACAGTAGTGGTGTGAACGGCTGAAGAGAAACAGGGAGGGGAGTTTAGAGAGAATGGCAGCGGCGCCATTTCTACGCAACAGATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGTCTGTGACTATTTGATCTCTTGTTTTATTCTTCGTTTGCTGTTTGGCTTGTTAGAATATGGTGTTTTTCTGGGTTCTTGTTTGATTTTGATTTGCTGTGGAGAATTTTTCAGATTGTTCTTTTGGCCAAAGAATGGTCGGGCAGCCAAATATGTTTCAGAAATGACTGTTTTCTTTTCTCTACATACGTGAAATGAATTGGGATGTTCGTTAATGCTGATTTTATGCTCAAATTATGATGGATTTTACACTTTTCTGCTTGAATTTGTAGTGTTACTTAAGGGTCTGCGCTTGTGATAGGACATGTTCTTGAGTTTTTGTATGCCGGTTGATTGAGAGAAGAATGAAGAACAGGTTAATTGACTGAGAGTTTGATTCTATTGTAGGAAAATGGTACCCTCCCTGAGTATCAACTGGTTTCTGAGGGAGTTGAACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGTGTTTTTTTTTTGGTCCTTAATCTATATTTTCTCAGGCTGTAGAGCTGTATAGTGTTTTTAGATTTGCCGGCATAACAAATACGAGCCGAACATGGATTCGTCTAATTTGTTTGATATCTATATAATTGCAACAGAGTGGTGGTCTGTTCTTTATAGCAAGCATTCATATAAACTAGAAAACCAGTTCAGAAAACTGAAGACTACTAGATTTCAGTACAAGTTACAAGTCTATGCCATCTTGAACAAAACTCAACCGACTAAGATACATACCTTCGATCAAGAAATCAAAGATTTGAATCTCTCTGCTTCACATGTTGAACCTAAAGAAAAGCTGTGAAGTTTATTGTTCTATTCGGATAGCAGCCACATGTCGGGTCTAATACTGACTAGGGAAGAACATGGGGCTTGGCCTCAATGATCTCAAATTGAGGGAAAATAGATAACTAACCCAATCCCACCAATCTGACTTGTTCATACTCTATGAACTATCATCTCAATTAGTCCCAAGTCTATTACTCTTCCACTCAAGGTGTTTAGAACGCGTCTGACAGGGAGAGGATATTGTCCTCTTTGGGCTTTCCCTTCTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGATAGGGAGAGGTTATAAAAAATGTTTTGTTCTTCTCTCCAACCAATGTAGGATCTCACAATCCACTCCCTTTGGGGCCAGCGTCCTCGTTGACACACCACCCAATGTTTGGCTCTAATATCATTTGTAATAGCCCAAGCCCACCGCTAGTCGATATTATCTTCTTTGGGTTTTCCCTTCCAAGCTTCCCTTCAAGGCTTTTAAATTGCATCTGCTAGGGAGAGGTTTCCACACTCTTATAAAAAATGCTCGTTCTCCTCTCCAACTGATGTAGGATCTCACAAATTTATCAGCCTTGTATCTAAGTCGATCGCAGTCTTTGTCATTCTTGGTCGGTTTCATTAATGAAATTAAGGATGCATCTTAGATTCACTCGTTTTAATGGAAAGTCATATCACAAGTGCAGGAATTGAAGGAAAACTGCATACTGCTCGAAAATGTTCGGATTTGCTATTTTCGCCGTTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCACTGAATCTTCCATTTGAAAGCCCTCTGTGCAAGGTTAAAGAACTGTTTTCTTTCCATTTGTGTTTGTGTGAAGAATCTGGTAGGCCACTTTTGTGGATTCAATATGTTCTTCATCTTCCTCCAGCTGATCATTATATAAATTTTGATATGCAGATGATGGAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTGGAGTTCTTGTCTCAGGCCAAAGTAAGCAAACCATTACTCGTTCTTGCTGACATCAAAAGTTATATTTAAAAAAAAATACCATAAAATTTTAGAAGTAGCATTAATCCTCTTTACCTTTACAAAAAGAAAAAAAAGTTTAAAAAAAGTGTCCATCCGTGTTGGACTTAGACATGCTAGTCAATCTAAAGTGTACATGTTTCTTGGGTGACCACCTACTTAAGATTTAATATCCTACGAATTATCTTGGGAACCAAATGTAGTAGTGTCAAGCTCGTCCCGTGAGGACCGTCAAGATTCATAAGTCACTGATATTATAGAAACCTTGTATGCCATTTCAGCTGAGACTTTGTTGATTTTGTGTTGGTTCATTTAAAACAGTGCAAAGAAGTTGGGGCTGTTGATGAGGAAGATCCATTCAAGCCGCCCGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGACTAGCCAAAGCAGTGCTTCAAATGGAGTCAAAATTTGAAGGGTATACCATATGTTATGTTCGACTTAGATTAATCTATCCCTATCGTTAACCTGTGCATAGTTCGATCGTCTGGATACTTCTTTCGTCCATTGAGATATTCTAATGAGTGTCGATCAGGATATAGTAGACTCAGAATAGACACGAGATTGTAGGTTCAGGATTTCATTAACAGGTGACTTTTAGTTCCGATCCCATTCCAACAGTCAAACTCCTTCCTGACCCAGCTTACCTGCCTTTGAAGTTGGAATGCCTTTCTCGAAATAGAATAGAAGAGTCCCCGGGGCATCAACAAATTAGAATTTTTTTTAGTGTAACAAATTGGGGTACAGGAGATTCTAATCTCCGATCTAATCTCTCCGATCTCGTCGATTGAAGCTCGGTTATGTTAGATTTTGTTGTTAACTTCTATAAATTGGCTGCTTATCAAACATCATCCTAATTTGAAAGGTTGAAGTTTTAAATTTGATAATAAAAGTTAAGTTGACTTACGTTTTGCAGATGTGCCATCTTGGTGATCAGCCATGGGGACCCCCTGCAAATTTTGCAGACAGTGATGGGAGCTGCCATGCATGAAAATGGAACGGGTTCTCATGATTTGGCTTCAAGATTACAAGCCGTCATCACCAAGCCCATTCTCTCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAACTTCGAGCTGTCGTTTGAGTTCCGGTAGCTTCTCGCCGGACTTAATTGAAGAAGGTGACCTCAAGAATCGTTGCTTCTTCTTTTTTTCTTTGGAATTAATGTTTTTAGTATATAGAATGTTGAATTTCAGGGTTATGCAGCAGAAAAAAGTACTTAATATTTTATCATGTATTAAAAGTTGTGATTTATATTTATGTGACACCATATAGGTGTATGATTCATTTAAGCTTGAAAAATGATACATTCCTGTTC CGATTGAAGAACAGTAGTGGTGTGAACGGCTGAAGAGAAACAGGGAGGGGAGTTTAGAGAGAATGGCAGCGGCGCCATTTCTACGCAACAGATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGAAAATGGTACCCTCCCTGAGTATCAACTGGTTTCTGAGGGAGTTGAACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGAGTGGTGGAATTGAAGGAAAACTGCATACTGCTCGAAAATGTTCGGATTTGCTATTTTCGCCGTTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCACTGAATCTTCCATTTGAAAGCCCTCTGTGCAAGTGCAAAGAAGTTGGGGCTGTTGATGAGGAAGATCCATTCAAGCCGCCCGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGACTAGCCAAAGCAGTGCTTCAAATGGAGTCAAAATTTGAAGGATGTGCCATCTTGGTGATCAGCCATGGGGACCCCCTGCAAATTTTGCAGACAGTGATGGGAGCTGCCATGCATGAAAATGGAACGGGTTCTCATGATTTGGCTTCAAGATTACAAGCCGTCATCACCAAGCCCATTCTCTCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAACTTCGAGCTGTCGTTTGAGTTCCGGTAGCTTCTCGCCGGACTTAATTGAAGAAGGTGACCTCAAGAATCGTTGCTTCTTCTTTTTTTCTTTGGAATTAATGTTTTTAGTATATAGAATGTTGAATTTCAGGGTTATGCAGCAGAAAAAAGTACTTAATATTTTATCATGTATTAAAAGTTGTGATTTATATTTATGTGACACCATATAGGTGTATGATTCATTTAAGCTTGAAAAATGATACATTCCTGTTC ATGGCAGCGGCGCCATTTCTACGCAACAGATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGAAAATGGTACCCTCCCTGAGTATCAACTGGTTTCTGAGGGAGTTGAACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGAGTGGTGGAATTGAAGGAAAACTGCATACTGCTCGAAAATGTTCGGATTTGCTATTTTCGCCGTTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCACTGAATCTTCCATTTGAAAGCCCTCTGTGCAAGTGCAAAGAAGTTGGGGCTGTTGATGAGGAAGATCCATTCAAGCCGCCCGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGACTAGCCAAAGCAGTGCTTCAAATGGAGTCAAAATTTGAAGGATGTGCCATCTTGGTGATCAGCCATGGGGACCCCCTGCAAATTTTGCAGACAGTGATGGGAGCTGCCATGCATGAAAATGGAACGGGTTCTCATGATTTGGCTTCAAGATTACAAGCCGTCATCACCAAGCCCATTCTCTCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAACTTCGAGCTGTCGTTTGA MAAAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLVSEGVEQAQLAGEQFLKSGGIEGKLHTARKCSDLLFSPFSRTIHTAKVAASALNLPFESPLCKCKEVGAVDEEDPFKPPEGGESVEDVASRLAKAVLQMESKFEGCAILVISHGDPLQILQTVMGAAMHENGTGSHDLASRLQAVITKPILSQHRKFALLTGELRAVV
BLAST of Cp4.1LG05g13370 vs. TrEMBL
Match: A0A0A0KQV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265820 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 7.0e-69 Identity = 148/232 (63.79%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. TrEMBL
Match: A0A0D2PMX0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 6.8e-64 Identity = 138/230 (60.00%), Postives = 161/230 (70.00%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. TrEMBL
Match: A0A059AQE6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01511 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 8.8e-64 Identity = 128/208 (61.54%), Postives = 164/208 (78.85%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. TrEMBL
Match: A0A0B0MNP0_GOSAR (Agropine synthesis reductase OS=Gossypium arboreum GN=F383_26703 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.6e-63 Identity = 138/230 (60.00%), Postives = 160/230 (69.57%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. TrEMBL
Match: A0A061DXC8_THECC (Phosphoglycerate mutase family protein OS=Theobroma cacao GN=TCM_006466 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.3e-62 Identity = 135/228 (59.21%), Postives = 161/228 (70.61%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. TAIR10
Match: AT4G38370.1 (AT4G38370.1 Phosphoglycerate mutase family protein) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-57 Identity = 121/225 (53.78%), Postives = 148/225 (65.78%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. NCBI nr
Match: gi|659120509|ref|XP_008460226.1| (PREDICTED: uncharacterized protein LOC103499109 [Cucumis melo]) HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69 Identity = 149/229 (65.07%), Postives = 170/229 (74.24%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. NCBI nr
Match: gi|449445284|ref|XP_004140403.1| (PREDICTED: uncharacterized protein LOC101220672 isoform X1 [Cucumis sativus]) HSP 1 Score: 268.5 bits (685), Expect = 1.0e-68 Identity = 148/232 (63.79%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. NCBI nr
Match: gi|700195625|gb|KGN50802.1| (hypothetical protein Csa_5G265820 [Cucumis sativus]) HSP 1 Score: 268.5 bits (685), Expect = 1.0e-68 Identity = 148/232 (63.79%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. NCBI nr
Match: gi|823204322|ref|XP_012436435.1| (PREDICTED: metal-independent phosphoserine phosphatase isoform X1 [Gossypium raimondii]) HSP 1 Score: 251.9 bits (642), Expect = 9.7e-64 Identity = 138/230 (60.00%), Postives = 161/230 (70.00%), Query Frame = 1
BLAST of Cp4.1LG05g13370 vs. NCBI nr
Match: gi|629089397|gb|KCW55650.1| (hypothetical protein EUGRSUZ_I01511 [Eucalyptus grandis]) HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63 Identity = 128/208 (61.54%), Postives = 164/208 (78.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |