Cp4.1LG05g10750 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g10750
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionActin
LocationCp4.1LG05 : 7093739 .. 7096028 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGCTCCAAATCATTCACTCCAAATTCTTCATTTCATCTGAATTTCATTTACATTTGCATTTCATCCTTTCTTTCCTTTTTTTTCTTTTTCCATATAAATATCCTCTTTTTTCCCTTCCTTTCTTCCACTACTTCCTTCTCTCCATTTTCGATCTCACCTTCTCGCCTTCGCAACCGAGAGAGACTGAGCCTGAAGAAGGAGAGTAGGCCGTCGATTCCTTCACTTTGCTCTCCGATTTTCCTTCATCTTTCTTGTTTCTTTAGGTATGTTCTCCTTTCGATCTGCTTTTGTTTAGATCTCTTACTCTGCTTTTTATTCGAGATTTGGATTTGCTTTAGCTTCCATTTCTGTTTTTTTTTTCAATCACTGTTATGAGCTTCGATCTGGCTTGATTTTGTCTGTTTTTACCAATGCCTGCCTTGATTTGTGTTGATCAGTACAACTTTTAGCTTCTAGCTCGTGGATTGTATCTTTGTTTAGTGCTTGTTTACTTCGTTCGTTGTTCTGAGTTTTTTTATGCGATTCGTACATCGGAATGCTGTTTCTTGCTGTACATGACTCTGTTCCTTCGTTTTTATTCCGTTCTCCCTCTCTCTTTTTTTCTTTTTTTTTTTTGTTCTGTTGTCTTTTTGGAATCTTTTTGATTTGTGAGGAATCGGTGGCCTTTTGATGCGCATTTGCAACCAGTGGCTGTTCTTTGACAATTTACGTGTTTTTTATACAAAATTTATAGTACTGGAGCTGAGATCTTGTGTTTCGTCGAAAGTCGCCTGTAATTTTCCCGATGCAATTTGAATTTTTCTAGCATCGTTTCCATTGTCAATTTTTTACATGTGTTCTGCATGACTGGACTTCTGAAGAAATTTCATTAAGGATCTAGATTAATTTCCTTGTTCTGTTAATAAGATATGTGGAAAGTTGATGGAACTGAGGATCGATTGTTTGCTTACGTAGTTAATAGAATTTTTAGATTAAAGTCGTGCGGCTTACAGTTCTTCCTCGTGTATAAAATTCAATGTTTTTAGCCGTTTTCTGTTTATTTAAGATTTGGACAAAGTTAGAAGTTAGATGGGTTTCTAAAGTAGATGTATTATTAGGTGGCAAATATTTTTATATGAACTCTGGGCCTTAAATTACAAGGTGGATTGTCAATGTGCATAGCACAGTTGTGCTTTGAATTCTATGTTATATTTAGCTCATCTGTGTCAATTTGTGTCTTTCAGTAACTACAAAAGATGGCCGATGCTGAGGATATCCAGCCACTTGTCTGCGATAATGGAACTGGAATGGTGAAGGTTAGATTACTGACCTTAAAATGCAGCTGCAGCTGTTTTTCTTGTTGTAGATCTACCTACGTGCGCNCTTTCTTTCCTTTTTTTTCTTTTTCCATATAAATATCCTCTTTTTTCCCTTCCTTTCTTCCACTACTTCCTTCTCTCCATTTTCGATCTCACCTTCTCGCCTTCGCAACCGAGAGAGACTGAGCCTGAAGAAGGAGAGTAGGCCGTCGATTCCTTCACTTTGCTCTCCGATTTTCCTTCATCTTTCTTGTTTCTTTAGGTATGTTCTCCTTTCGATCTGCTTTTGTTTAGATCTCTTACTCTGCTTTTTATTCGAGATTTGGNGCAATAATTATTACTGTTTTTCTCAGTTGTCTCCACTTTGTTAATTGGCTTGAAGTTTTAAAATTTTATTTTTAGGCTGGATTTGCTGGTGATGATGCTCCTAGGGCAGTGTTTCCCAGCATTGTTGGTCGACCCCGACACACTGGTGTCATGGTAGGTATGGGCCAGAAGGATGCTTATGTCGGTGATGAGGCCCAATCCAAAAGAGGTATTCTCACCTTGAAATATCCCATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATTTGGCATCACACATTCTACAATGAGCTTCGTGTTGCACCTGAAGAACACCCTGTGCTTCTTACTGAAGCACCTCTCAATCCCAAAGCTAACAGAGAAAAGATGACACAAATCATGTTTGAAACTTTTAATGTACCTGCTATGTATGTTGCTATCCAGGCCGTTCTATCTCTGTACGCCAGTGGTCGTACAACAGGTTCACATCCATCTTCTCCTTCTGTCTTAAAGTTTGGACTCTTGGACTTTGATTTGGATAGTATTTTTAATGCATTCTTTGAACAGGTATTGTGCTGGACTCTGGTGATGGTGTTAGTCACACTGTGCCAATCTACGAGGGTTATGCTCTACCCCATGCTATCCTCCGTCTGGACCTTGNGGATTTGCTTTAG

mRNA sequence

TGGTGCTCCAAATCATTCACTCCAAATTCTTCATTTCATCTGAATTTCATTTACATTTGCATTTCATCCTTTCTTTCCTTTTTTTTCTTTTTCCATATAAATATCCTCTTTTTTCCCTTCCTTTCTTCCACTACTTCCTTCTCTCCATTTTCGATCTCACCTTCTCGCCTTCGCAACCGAGAGAGACTGAGCCTGAAGAAGGAGAGTAGGCCGTCGATTCCTTCACTTTGCTCTCCGATTTTCCTTCATCTTTCTTGTTTCTTTAGTAACTACAAAAGATGGCCGATGCTGAGGATATCCAGCCACTTGTCTGCGATAATGGAACTGGAATGGTGAAGGCTGGATTTGCTGGTGATGATGCTCCTAGGGCAGTGTTTCCCAGCATTGTTGGTCGACCCCGACACACTGGTGTCATGGTAGGTATGGGCCAGAAGGATGCTTATGTCGGTGATGAGGCCCAATCCAAAAGAGGTATTCTCACCTTGAAATATCCCATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATTTGGCATCACACATTCTACAATGAGCTTCGTGTTGCACCTGAAGAACACCCTGTGCTTCTTACTGAAGCACCTCTCAATCCCAAAGCTAACAGAGAAAAGATGACACAAATCATGTTTGAAACTTTTAATGTACCTGCTATGTATGTTGCTATCCAGGCCGTTCTATCTCTGTACGCCAGTGGTCGTACAACAGGTATTGTGCTGGACTCTGGTGATGGTGTTAGTCACACTGTGCCAATCTACGAGGGTTATGCTCTACCCCATGCTATCCTCCGTCTGGACCTTGNGGATTTGCTTTAG

Coding sequence (CDS)

ATGGCCGATGCTGAGGATATCCAGCCACTTGTCTGCGATAATGGAACTGGAATGGTGAAGGCTGGATTTGCTGGTGATGATGCTCCTAGGGCAGTGTTTCCCAGCATTGTTGGTCGACCCCGACACACTGGTGTCATGGTAGGTATGGGCCAGAAGGATGCTTATGTCGGTGATGAGGCCCAATCCAAAAGAGGTATTCTCACCTTGAAATATCCCATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATTTGGCATCACACATTCTACAATGAGCTTCGTGTTGCACCTGAAGAACACCCTGTGCTTCTTACTGAAGCACCTCTCAATCCCAAAGCTAACAGAGAAAAGATGACACAAATCATGTTTGAAACTTTTAATGTACCTGCTATGTATGTTGCTATCCAGGCCGTTCTATCTCTGTACGCCAGTGGTCGTACAACAGGTATTGTGCTGGACTCTGGTGATGGTGTTAGTCACACTGTGCCAATCTACGAGGGTTATGCTCTACCCCATGCTATCCTCCGTCTGGACCTTGNGGATTTGCTTTAG

Protein sequence

MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLXDLL
Homology
[Close]
BLAST of Cp4.1LG05g10750 vs. Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-103
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-103
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-103
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-103
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 7.2e-103
Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETF+VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TrEMBL
Match: A0A0A7M859_9SPER (Actin related protein 1 OS=Pinus massoniana GN=act1 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TrEMBL
Match: Q7XZJ2_GOSHI (Actin OS=Gossypium hirsutum GN=ACT11 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TrEMBL
Match: A0A0A7WCJ2_PRUAV (Actin V1 OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TrEMBL
Match: A9YMF0_IPOBA (Actin OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TrEMBL
Match: G3FLW1_MANIN (Actin 1 OS=Mangifera indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TAIR10
Match: AT5G09810.1 (AT5G09810.1 actin 7)

HSP 1 Score: 375.2 bits (962), Expect = 2.4e-104
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TAIR10
Match: AT3G12110.1 (AT3G12110.1 actin-11)

HSP 1 Score: 373.6 bits (958), Expect = 6.9e-104
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TAIR10
Match: AT5G59370.1 (AT5G59370.1 actin 4)

HSP 1 Score: 372.5 bits (955), Expect = 1.5e-103
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TAIR10
Match: AT3G46520.1 (AT3G46520.1 actin-12)

HSP 1 Score: 372.5 bits (955), Expect = 1.5e-103
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. TAIR10
Match: AT2G37620.1 (AT2G37620.1 actin 1)

HSP 1 Score: 372.1 bits (954), Expect = 2.0e-103
Identity = 178/182 (97.80%), Postives = 180/182 (98.90%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. NCBI nr
Match: gi|149938964|gb|ABR45727.1| (ACT1 [Actinidia deliciosa])

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. NCBI nr
Match: gi|641834396|gb|KDO53391.1| (hypothetical protein CISIN_1g037845mg [Citrus sinensis])

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. NCBI nr
Match: gi|397777500|gb|AFO65511.1| (actin 2 [Narcissus tazetta])

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. NCBI nr
Match: gi|317383896|gb|ADV17460.1| (actin [Litchi chinensis])

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]
BLAST of Cp4.1LG05g10750 vs. NCBI nr
Match: gi|672177838|ref|XP_008809027.1| (PREDICTED: actin-2 [Phoenix dactylifera])

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g10750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACT1_ORYSJ4.2e-10399.45Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1[more]
ACT1_ORYSI4.2e-10399.45Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1[more]
ACT1_SORBI4.2e-10399.45Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1[more]
ACT7_ARATH4.2e-10399.45Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT2_ORYSI7.2e-10398.90Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1[more]
BLAST of Cp4.1LG05g10750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A7M859_9SPER1.6e-101100.00Actin related protein 1 OS=Pinus massoniana GN=act1 PE=2 SV=1[more]
Q7XZJ2_GOSHI1.6e-101100.00Actin OS=Gossypium hirsutum GN=ACT11 PE=2 SV=1[more]
A0A0A7WCJ2_PRUAV1.6e-101100.00Actin V1 OS=Prunus avium PE=2 SV=1[more]
A9YMF0_IPOBA1.6e-101100.00Actin OS=Ipomoea batatas PE=2 SV=1[more]
G3FLW1_MANIN1.6e-101100.00Actin 1 OS=Mangifera indica GN=ACT1 PE=2 SV=1[more]
BLAST of Cp4.1LG05g10750 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09810.12.4e-10499.45 actin 7[more]
AT3G12110.16.9e-10498.90 actin-11[more]
AT5G59370.11.5e-10398.35 actin 4[more]
AT3G46520.11.5e-10398.35 actin-12[more]
AT2G37620.12.0e-10397.80 actin 1[more]
BLAST of Cp4.1LG05g10750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|149938964|gb|ABR45727.1|2.3e-101100.00ACT1 [Actinidia deliciosa][more]
gi|641834396|gb|KDO53391.1|2.3e-101100.00hypothetical protein CISIN_1g037845mg [Citrus sinensis][more]
gi|397777500|gb|AFO65511.1|2.3e-101100.00actin 2 [Narcissus tazetta][more]
gi|317383896|gb|ADV17460.1|2.3e-101100.00actin [Litchi chinensis][more]
gi|672177838|ref|XP_008809027.1|2.3e-101100.00PREDICTED: actin-2 [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020902Actin/actin-like_CS
IPR004001Actin_CS
IPR004000Actin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006007 glucose catabolic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0032880 regulation of protein localization
biological_process GO:0048767 root hair elongation
biological_process GO:0009845 seed germination
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0007010 cytoskeleton organization
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005618 cell wall
molecular_function GO:0005524 ATP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0004386 helicase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g10750.1Cp4.1LG05g10750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 28..37
score: 2.8E-47coord: 117..130
score: 2.8E-47coord: 142..161
score: 2.8E-47coord: 63..85
score: 2.8E-47coord: 51..62
score: 2.8
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 1..182
score: 2.6E
IPR004000Actin familyPFAMPF00022Actincoord: 5..182
score: 9.8
IPR004000Actin familySMARTSM00268actin_3coord: 7..186
score: 2.9
IPR004001Actin, conserved sitePROSITEPS00406ACTINS_1coord: 55..65
scor
IPR020902Actin/actin-like conserved sitePROSITEPS01132ACTINS_ACT_LIKEcoord: 106..118
scor
NoneNo IPR availableGENE3DG3DSA:3.30.420.40coord: 5..182
score: 2.0
NoneNo IPR availablePANTHERPTHR11937:SF247SUBFAMILY NOT NAMEDcoord: 1..182
score: 2.6E
NoneNo IPR availableunknownSSF53067Actin-like ATPase domaincoord: 6..155
score: 6.15E-67coord: 148..182
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g10750MELO3C023264.2Melon (DHL92) v3.6.1cpemedB787
Cp4.1LG05g10750CsaV3_2G018090Cucumber (Chinese Long) v3cpecucB0887
Cp4.1LG05g10750CsGy2G015500Cucumber (Gy14) v2cgybcpeB247
Cp4.1LG05g10750Carg24328Silver-seed gourdcarcpeB1011
Cp4.1LG05g10750Carg11682Silver-seed gourdcarcpeB1476
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g10750Cp4.1LG16g00720Cucurbita pepo (Zucchini)cpecpeB320
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g10750Cucumber (Gy14) v1cgycpeB0666
Cp4.1LG05g10750Cucurbita maxima (Rimu)cmacpeB581
Cp4.1LG05g10750Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g10750Cucurbita moschata (Rifu)cmocpeB530
Cp4.1LG05g10750Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g10750Wild cucumber (PI 183967)cpecpiB715
Cp4.1LG05g10750Cucumber (Chinese Long) v2cpecuB712
Cp4.1LG05g10750Bottle gourd (USVL1VR-Ls)cpelsiB601
Cp4.1LG05g10750Watermelon (Charleston Gray)cpewcgB647
Cp4.1LG05g10750Watermelon (97103) v1cpewmB746
Cp4.1LG05g10750Melon (DHL92) v3.5.1cpemeB657