Cp4.1LG05g08690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g08690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA repair protein RAD51 2
LocationCp4.1LG05 : 5743155 .. 5749360 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGTTCTTAATTTAGACTTGGTTCATAATGTCATGTATTGAACGGGAGTTTCTCTTTTGAAATATTTTTCCAGGCTTGTTCTCTGTTCTTGGTTGGATTAGTTTTCAGCCCTGTAGCCGGTTTTAGCCTATAGAAAATTAAATTGCAGTATTGGTTTATTTAATTTGTTTCAGGAAGCTTTATACTTAACTGAATTTGAGTTGATGGAGTTATTGGACGCGGGATTGTTGGAAGTTGCATCAGCAGTTGCGCACATTATTGAATTGCTTCTCTCCTTATCAGACGGTAAGAAATCAGTTGCTTCTATTTATTGATTGTCAAGCGCATTATACTTGTCTAAGAGGATTTTTTTTTGTTTATGCTTTCCACATCCCTGACTTCTGTTGCTTTTAGAGGTGATGATCTAGTTGCATCAATTGGTGCTTTCTCTAATGGATCAAAGACTTCAAAACGAGCATTTAACTGGCCATCTTTCTACATGTTTAAAAGGTTTAGACGAGGCCTTATTTGGTGGAATCCCATTTGGTGTCTTGACAGAGCTTGTTGGTCCAGCTTGAATTGGCAAAACGCAAGTGTGATTCTTTCCTAGTTTTCGGGTTTGTTAATTATCTTTATGTTATATCAGAAAATTTTAGTTGATTGGATTGGAGTATCAATTGAATATATGGTTGCATAAGTTGAAGCATGTTCAACTACTTTCTGCTGACATGCGACTTTTTCTGGTTGTTGAATTTCAGTTTTGCTTGAAACTCTCTTTATTGGCTGCTCTGCCACCGAGCTATGGAATATATATTGATGTAGAATCTAAGTTTAGTTCCAGAAGGGCTTTTAATTATACCATGCTACTGGTTGTTTACTCATTATATTTGTGTAATGGGCGCATGACTTTTTTGGTTTTTCAACTCCGTCTCTCTCGGCAGGATGATTGAAATTGACATGAGAAGCTTTCCTGTTGTATTGCAAATGAAGGACATGGCACAAGAGGTATCAAACTGATATATATTCTTTTCCTTTCAAATTTTAATTTAAAATGCATAAGATGGAACATTCTTAATTTTCACTCCAGATGGCTGGTAGGATTCTTGTTTTGCCACCTGCATCACTTTCTGAATTCACTGAGAGGTTTGGATCAAAGTCAAATAAATGTCATTTGGCCTAGACATGTCAATGATTTGAGAAAATGAAATGCTAAGGATAACACATTTTATCTACAAAATTTAGCAGAATATTTAGACGTATGTAATGCAGTTCGAGGTATGTACATATTAGCTCAATTGCAATGATTTTCCTGCAATGGCATTGAATATTCAAATAGAACACAATTCAAGTGCTTGTTAGGACTGGGATTTCGTGGACTATCCATATATAGCCTATAGATAATCATCAATCATTAGTTAGAATAATGAAGATTGTAAACGGAGAAGAAAAATGAATGCTGCACTTACTCATATATTTTTAGAGTTTATTCCCAACCAATGTCTGATGTCAAGTACCAGAGCGTTTATCTGATCACCTTCTGTATAGACAGGCATAAGTTTGCAACTCAAATGTGACTGGAGATTAAATGAAATGCAGTTATATGCATTCGTTTAAGTTATAGCAATGGATCTGAATAAGTCTGTATCATATAGTGCTTTTGCGAGAGATTGACTGTGCACACTTGACTTGCATCTCTCAAACTCGATTCAGTTATCTAATAAAATTGCTGTGAATTCTGCATGTGGAGGCTCTTCTCTTTTCCCATTAACCTACAAACCCATGAAAGATTTTCAATATCTGTATTGTTATAGCACTATGGTTCATTGACTCATTCTGTGACAATTTGTTTGGTGCTTGAAGCAAAATTTGGTTGGAACACTTTTCACTGATTATTGCCCTTTGGCTGATATAATGCTGAAATGGCTCTGATGTCAACGGATCTTTATGTTTAATGATATCTTCTCGGCTTGTTTAAGTTTTAAGCGAGATAGGGGCAGTCGAAACTAGAGAAAGTGCTTCTAACAATGTTTCATAACTCATCATTTCCATCATCCCTCATAGGTCAGAGGTTCATCAAGATTGCAAAATCTCCAATGTCTCCACCCCTAACTTTCCCTTTTATCATAACCTCATCCAGAATTTCATTGTGGAGTGACAATTGAAAAGAACCAAGTGGAGCTGAGATCAATGAGAGTCACCGTCAAGGTTTCTGTTACTCCCTAGGAAGAACGGTAGCAACATAAACAGCGCCTTCTCTTCAATTAAAAATCTATATGGACATAAGTTAGAAGCTCAAGTACTCTCAAAACACTTTACTCTTTGTTTTCTCCAAAACATTTTGAACTGATAGTTGCAAATTCAATATCATTGCCTCCATGATGTTAATAACTTATCTCCCAGCTTCATTGTCTGAAATTTACCAAGGATGCTACGAGAAGTTGATGTTTTTAGTGTATTATATTCTACTATTAAGCCTAAGATATACTCCGTACTAGGTTTCTCTTTAGCTTTGTTGTTTTTTGGTTGTTTGGCTTTATGACATTAATGCAGGACACGGTGATATTAACAGCTATTATTTGGAAAATGAGCAACGTGAATGGGACTGCTAAAAATCTCAGGCTTGTCATGCATATACGAGACTTGTGCTGAATTGGTGGTTTCCTGTTGTTAATGGTCGGTTAATGAGGAAATAGTTCATTAATTTCGAATTATGATTTGGATTCTCATTTCATGTTCAATTTTAACATTTGAAATTACAGTGAATATTTTTCCTATTTCATGAGAATCCATGATTATTCTACCATTTTCTTTTTTATCAGGTTATATTAAGCGGATAGCTTAGAACTAACCAACCGAACATGGAAGATGGAAAAGATATCAAAGCTGCGGATGATTTTTGTGGAGTGGAATTGTTTGCCTAATTTCTTAGTGATAAAAATGTTTGGAAAGTACGGGTAGGACGTTGTGTTGATTCATTATAATGCTGGAACTAGGTTGCCACCAATTTGATCGTGCTCCAGCCAGCTCCTAATTGATACAATGATGTCTTATGACATTTACCTATATCGAGTGAAGTTCTACAGGTTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATATCTGTGAGTGTCTAAGTCCACTTGCACGCAACTCGACTAATCTACGAGACAACTGCCCAACCCTACTACATTTGGTTGTAAAAAAAATGGTATCTACCATAAATTGAACTAGTTCTCTCTAAGTTTTCTGGTCCTTGCAACTCTTGATGGTTATAGCCACAAACATTTTGAGATTGAACCTTGCATGCTTAACAAAAATTCTGTTGATGCATGGACGATTGTGGTAGACTATAGTTTCAAAGATTGCAAAACACTAGATTTCGGAACTCTTGGAACACAATGGCTATTAAAACAAAGGAATTGTGGTATGTTCTAAATATGGAGAATAAAAATTTCTATGGACTAACATATTTTATGGTCACGTGAATGTTTCATTATTCCAAACTTTCAAGTACAGCAAGCTGTGGAAGGAAAAAAGAAAAAGAGTTAACCTGAAGGTTTGTAATCAATTTTATATCCTGTCCTAAGACTTGGTCTACTTCAGATTTGGAGTTGATTTATGTTTCTACATTTCAGGGTTTTCTATCAAGGAAGATGGCTTGCTGGAAACCAGAGCAGGTTCTCTAGAACCTTTTTGTGGGCATTTTTGCAAGTGGATGGTTGAAAGAAAGCAATCTCGATGCTGTCAAATTAAGGAAGGTGGTTTTGCTAAAACACTTCTCATTTTAAAATTGCAGATATGTTTCCCAGTAACTTATGCTCTTTCTAGTAGATTCTCCATTCCCATTAGTTTATTTTAGTGTAGATGATTTTACTAATCCTACCCACTTTGTATTTTATATTTTAAAACCTGATCGAGATCCACCAATTATCTTGAACTTTGAGAAACAAAGAATAAATAATGCAGCAACTTATCGAATCCTTCGACAGAGAAAAGGAATATTGGCCCTGCAATTGTCACAAACGAAGAACAAACTAAGGAACATAAAAGAAACAAATCAAAGAAAAGAAAAGAAAAGCTGTAGAAACATAGAAACATGAAGCCAGCCAGTTAGAAACAGATGTTTTCACCTTGAAATTGTCCTTTACTCTACAAATAAAATCCTGATTTTACCTTCTGTAATTCCTGTCTTTGTTGGTTGTCAAATTTACCACGTGTTAGTTATATTATTGGCTGTCTCTTGACCATACTTTGCTTTGGACATAATATCAAAAAGAAAACAAAATGTGCTTTATATGATGATAAGATTCATGTTGGGTGGAGTGACAATGCCATCAAAACACAAACCTTTTAGTTCAACCCAAAACCTTCAAATGGAAGAATGAAACACAAATATTAACCAAAAGCCCTACCTGCTGTTCCCTGTATCATTGCTTTTTAAAAACTATGATAAGATTCATCTCTCGGAATAAAATCATATTTAGATTGAATTCTGGAAGCCCTTCAAAAGGAAGAGTGAGGTAAAATTCTCAGCCAATTACTTCCCTGTCCCACATACCTACCTACTAAAGATGTAGAACAGTTTGTATCTTTTTCTTTTAGTTCTTCATGATTTTGTTTTCTTTTCTTTGGGTAATAAACCAATAGAAGGTTAAAGAAAGGGGGGTGGGGGGAAAGCAATGCATAGAAGAAAAGGACTGGAAAGTAGAAACTGGGGTGATTTTGTTTTAGCCCAAGTAGACATAAAAGTACTTGAAATCTTCCTCCACTGCTTTATTTTAACAAGAAAAAGGTTGGTTTGTAGCTGTGGGGAGTCCAAACGTTTGACATTTTCTGTTCCTCAAACTTTTTTAAGGATTCATTCTCTTTTCTGCCTTTTTTTTCTTCCCATTTGGACTCATTATCCTTTCTCTTTCTCTCTCTTGCAGATTGTGTTCTATTTGACATGTGACCCATTGACCCCGCCAGCAACTGAGGTATTTTTTATGCTTTAAAAAGAATTGCAAATTGGTATTCAAATTTGGTACTTCTTTTTTTGTTTTTCCAATGAATGTCTGAACATGTTTAGCTTTTAAGTACAGAAATGATCCGATGCTGTTTGCAATAAATTAATGAGGCATTTAGTCACTAATACATTGGACTTACCTTTTCTTTATTATTAACTTTCAGACATCTTAATCTCCTCGAAATGTTTTGTCGCTTTATATTATATTGTTATAAATATACGATGCTCCTTTTATATTTTATTCTATTTTATTCTATTTTATTTGTGGTATCATGTTCAGTGCACTCACGCATTTTATTTTGATAGCTATAATGTTCGTTCTTTGAGAAAATATCAAGTTTATCTTTCAACTTTTTCTAATTTTAAATTATAAAGATTGGCTTTTAAATTTGAACCTAGTATTTTTTTTTTTTTTTAATTCACTATCTAATGTATTACACGTACAAGATTTTGTATGCTTTAAAAATGTTTAAATTATTTGCTTGATATTTGTCGCTAACTCTTGACTTTATCCATAGGAATTGAATTGATGGATTTGTTATGATATACAGTTGTGATTCATGTGAAGGTTATCTCTACAATATGCTTTTCTAGAAAATTCAAATAAAAAAATCCTGAAAAGATTTGAGCCATAAGATTAGTAATTTTGAGTTATTTTATTGGATAATCTCTTGATTTTGGTAATGGCCAGTTGTTGTTCTTAATTTATTTAATATTCCTCTTGTTTTTTTTTTTCGAGGTTTCTTTATTTTAATTGCTTCTCTCGTGGTTGAGAGGCATCATTATTTGGATTTTTTTTTAATTATTAGTACAAAGGTTTCTCAATAATTTGTGACTAGGATGGTTTTATTATCTATTTCTTTATTACTTAGAATGATTTTTTTGAATCGGGGAAGTGTACCGGTACTAATTTTCTACTGAAATAGAATCGTTACTATATGCATGACATGACATTTCTATTTGGAAACGTTCATTTAGAATAATTTTATGAAACGAATGCAACTACTCTAATGTAGGTTTTATGGCCTTTGATGTGATGTTGTCGTCACTCGTACTGGGATATCCTTGCATTTATCTAAAATATAAGAGTAGCACAGAACAAATATTCCGGAAGTAACTTCACTATTGGATCCATGGAATGCAAAACATGAATGAGACTTATCTTTAAAACAATATTCTCTTAGGTGGCCGCAAGCTAGATGTGTAG

mRNA sequence

ATGGCAATGGAAGCTTTATACTTAACTGAATTTGAGTTGATGGAGTTATTGGACGCGGGATTGTTGGAAGTTGCATCAGCAGTTGCGCACATTATTGAATTGCTTCTCTCCTTATCAGACGGTGATGATCTAGTTGCATCAATTGGTGCTTTCTCTAATGGATCAAAGACTTCAAAACGAGCATTTAACTGGCCATCTTTCTACATGTTTAAAAGGTTTAGACGAGGCCTTATTTGGTGGAATCCCATTTGGTGTCTTGACAGAGCTTGTTGGTCCAGCTTGAATTGGCAAAACGCAATTTTCGGGATGATTGAAATTGACATGAGAAGCTTTCCTGTTGTATTGCAAATGAAGGACATGGCACAAGAGATGGCTGGTAGGATTCTTGTTTTGCCACCTGCATCACTTTCTGAATTCACTGAGAGAATATTTAGACAATTTCATTGTGGAGTGACAATTGAAAAGAACCAAGTGGAGCTGAGATCAATGAGAGTCACCGTCAAGGGTTTTCTATCAAGGAAGATGGCTTGCTGGAAACCAGAGCAGATTGTGTTCTATTTGACATGTGACCCATTGACCCCGCCAGCAACTGAGTACAAAGGTGGCCGCAAGCTAGATGTGTAG

Coding sequence (CDS)

ATGGCAATGGAAGCTTTATACTTAACTGAATTTGAGTTGATGGAGTTATTGGACGCGGGATTGTTGGAAGTTGCATCAGCAGTTGCGCACATTATTGAATTGCTTCTCTCCTTATCAGACGGTGATGATCTAGTTGCATCAATTGGTGCTTTCTCTAATGGATCAAAGACTTCAAAACGAGCATTTAACTGGCCATCTTTCTACATGTTTAAAAGGTTTAGACGAGGCCTTATTTGGTGGAATCCCATTTGGTGTCTTGACAGAGCTTGTTGGTCCAGCTTGAATTGGCAAAACGCAATTTTCGGGATGATTGAAATTGACATGAGAAGCTTTCCTGTTGTATTGCAAATGAAGGACATGGCACAAGAGATGGCTGGTAGGATTCTTGTTTTGCCACCTGCATCACTTTCTGAATTCACTGAGAGAATATTTAGACAATTTCATTGTGGAGTGACAATTGAAAAGAACCAAGTGGAGCTGAGATCAATGAGAGTCACCGTCAAGGGTTTTCTATCAAGGAAGATGGCTTGCTGGAAACCAGAGCAGATTGTGTTCTATTTGACATGTGACCCATTGACCCCGCCAGCAACTGAGTACAAAGGTGGCCGCAAGCTAGATGTGTAG

Protein sequence

MAMEALYLTEFELMELLDAGLLEVASAVAHIIELLLSLSDGDDLVASIGAFSNGSKTSKRAFNWPSFYMFKRFRRGLIWWNPIWCLDRACWSSLNWQNAIFGMIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVELRSMRVTVKGFLSRKMACWKPEQIVFYLTCDPLTPPATEYKGGRKLDV
Homology
[Close]
BLAST of Cp4.1LG05g08690 vs. Swiss-Prot
Match: RA51B_ARATH (DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana GN=RAD51B PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVEL 161
           +IE+ + SFP V  +K MAQEMAGRILVL P SL+ FTE I    +   +I +NQV+L
Sbjct: 153 VIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKN---SILQNQVKL 207

[Close]
BLAST of Cp4.1LG05g08690 vs. TrEMBL
Match: A0A0B2RM90_GLYSO (DNA repair protein RAD51 like 2 OS=Glycine soja GN=glysoja_005481 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 59/172 (34.30%), Postives = 80/172 (46.51%), Query Frame = 1 

Query: 2   AMEALYLTEFELMELLDAGLLEVASAVAHIIELLLSLSDGDDLVASIGAFSNGSKTSKRA 61
           A +AL  TEFELMELLD G  EV SA+AH + LL      + L   +     G    +  
Sbjct: 27  AKDALSHTEFELMELLDVGKEEVTSAMAHALLLLEQRVLNESLAGHLSTRLKG--LDEAL 86

Query: 62  FNWPSFYMFKRFRRGLIWWNPIWCLDRACWSSLNWQ-------------NAIFGMIEIDM 121
                F +              +CL  +  +SL                 + F +IEI +
Sbjct: 87  CGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVIYIDVESKFRLIEIGI 146

Query: 122 RSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVEL 161
            SFP +   K MAQEMAGRIL+L P SLSEF E + +     V++ + QV+L
Sbjct: 147 NSFPEIFLKKGMAQEMAGRILILHPTSLSEFAESLHQ---IRVSLLQQQVKL 193

[Close]
BLAST of Cp4.1LG05g08690 vs. TrEMBL
Match: A0A0A0KFZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G296460 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-07
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFR 146
           MIEI MRSFP V   KDMAQEMAGRILVL PASLSEFTE + +
Sbjct: 153 MIEIGMRSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHK 195

[Close]
BLAST of Cp4.1LG05g08690 vs. TrEMBL
Match: A0A061GXX1_THECC (DNA repair (Rad51) family protein isoform 2 OS=Theobroma cacao GN=TCM_041998 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVE--- 162
           ++EI +RSFP + QMK+MAQEMAGRI VL P+SLSEFT+ + +     V++ +NQV+   
Sbjct: 153 LLEIGLRSFPEIFQMKEMAQEMAGRIFVLRPSSLSEFTQSLQQ---IKVSLLQNQVKMLV 212

Query: 163 LRSMRVTVKG 170
           + SM   V G
Sbjct: 213 IDSMAALVSG 219

[Close]
BLAST of Cp4.1LG05g08690 vs. TrEMBL
Match: A0A061GYG2_THECC (DNA repair (Rad51) family protein isoform 1 OS=Theobroma cacao GN=TCM_041998 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVE--- 162
           ++EI +RSFP + QMK+MAQEMAGRI VL P+SLSEFT+ + +     V++ +NQV+   
Sbjct: 153 LLEIGLRSFPEIFQMKEMAQEMAGRIFVLRPSSLSEFTQSLQQ---IKVSLLQNQVKMLV 212

Query: 163 LRSMRVTVKG 170
           + SM   V G
Sbjct: 213 IDSMAALVSG 219

[Close]
BLAST of Cp4.1LG05g08690 vs. TrEMBL
Match: A0A0D2PPN7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G105400 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-06
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVE--- 162
           ++EI +RSFP + QMK+MAQEMAGRILVL P SL+EFT+ + +     V + +NQV+   
Sbjct: 153 LLEIGLRSFPEIFQMKEMAQEMAGRILVLRPTSLAEFTQSLEQ---IKVLLLQNQVKMLV 212

Query: 163 LRSMRVTVKG 170
           + SM   V G
Sbjct: 213 IDSMAALVSG 219

[Close]
BLAST of Cp4.1LG05g08690 vs. TAIR10
Match: AT2G28560.1 (AT2G28560.1 DNA repair (Rad51) family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVEL 161
           +IE+ + SFP V  +K MAQEMAGRILVL P SL+ FTE I    +   +I +NQV+L
Sbjct: 153 VIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKN---SILQNQVKL 207

[Close]
BLAST of Cp4.1LG05g08690 vs. NCBI nr
Match: gi|734405637|gb|KHN33439.1| (DNA repair protein RAD51 like 2 [Glycine soja])

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 59/172 (34.30%), Postives = 80/172 (46.51%), Query Frame = 1 

Query: 2   AMEALYLTEFELMELLDAGLLEVASAVAHIIELLLSLSDGDDLVASIGAFSNGSKTSKRA 61
           A +AL  TEFELMELLD G  EV SA+AH + LL      + L   +     G    +  
Sbjct: 27  AKDALSHTEFELMELLDVGKEEVTSAMAHALLLLEQRVLNESLAGHLSTRLKG--LDEAL 86

Query: 62  FNWPSFYMFKRFRRGLIWWNPIWCLDRACWSSLNWQ-------------NAIFGMIEIDM 121
                F +              +CL  +  +SL                 + F +IEI +
Sbjct: 87  CGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVIYIDVESKFRLIEIGI 146

Query: 122 RSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFRQFHCGVTIEKNQVEL 161
            SFP +   K MAQEMAGRIL+L P SLSEF E + +     V++ + QV+L
Sbjct: 147 NSFPEIFLKKGMAQEMAGRILILHPTSLSEFAESLHQ---IRVSLLQQQVKL 193

[Close]
BLAST of Cp4.1LG05g08690 vs. NCBI nr
Match: gi|778714384|ref|XP_011657224.1| (PREDICTED: DNA repair protein RAD51 homolog 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-07
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFR 146
           MIEI MRSFP V   KDMAQEMAGRILVL PASLSEFTE + +
Sbjct: 83  MIEIGMRSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHK 125

[Close]
BLAST of Cp4.1LG05g08690 vs. NCBI nr
Match: gi|449463635|ref|XP_004149537.1| (PREDICTED: DNA repair protein RAD51 homolog 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-07
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFR 146
           MIEI MRSFP V   KDMAQEMAGRILVL PASLSEFTE + +
Sbjct: 153 MIEIGMRSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHK 195

[Close]
BLAST of Cp4.1LG05g08690 vs. NCBI nr
Match: gi|659127776|ref|XP_008463884.1| (PREDICTED: DNA repair protein RAD51 homolog 2 isoform X2 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFR 146
           MIEI MRSFP V   KDMA+EMAGRILVL PASLSEFTE + +
Sbjct: 153 MIEIGMRSFPDVFNKKDMAKEMAGRILVLRPASLSEFTESLHK 195

[Close]
BLAST of Cp4.1LG05g08690 vs. NCBI nr
Match: gi|659127772|ref|XP_008463881.1| (PREDICTED: DNA repair protein RAD51 homolog 2 isoform X1 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 103 MIEIDMRSFPVVLQMKDMAQEMAGRILVLPPASLSEFTERIFR 146
           MIEI MRSFP V   KDMA+EMAGRILVL PASLSEFTE + +
Sbjct: 174 MIEIGMRSFPDVFNKKDMAKEMAGRILVLRPASLSEFTESLHK 216

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g08690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA51B_ARATH3.1e-0653.45DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana GN=RAD51B PE=2 SV=2[more]
BLAST of Cp4.1LG05g08690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B2RM90_GLYSO1.5e-0734.30DNA repair protein RAD51 like 2 OS=Glycine soja GN=glysoja_005481 PE=4 SV=1[more]
A0A0A0KFZ1_CUCSA2.6e-0776.74Uncharacterized protein OS=Cucumis sativus GN=Csa_6G296460 PE=4 SV=1[more]
A0A061GXX1_THECC1.7e-0650.00DNA repair (Rad51) family protein isoform 2 OS=Theobroma cacao GN=TCM_041998 PE=... [more]
A0A061GYG2_THECC1.7e-0650.00DNA repair (Rad51) family protein isoform 1 OS=Theobroma cacao GN=TCM_041998 PE=... [more]
A0A0D2PPN7_GOSRA2.9e-0650.00Uncharacterized protein OS=Gossypium raimondii GN=B456_001G105400 PE=4 SV=1[more]
BLAST of Cp4.1LG05g08690 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28560.11.8e-0753.45 DNA repair (Rad51) family protein[more]
BLAST of Cp4.1LG05g08690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|734405637|gb|KHN33439.1|2.2e-0734.30DNA repair protein RAD51 like 2 [Glycine soja][more]
gi|778714384|ref|XP_011657224.1|3.7e-0776.74PREDICTED: DNA repair protein RAD51 homolog 2 isoform X2 [Cucumis sativus][more]
gi|449463635|ref|XP_004149537.1|3.7e-0776.74PREDICTED: DNA repair protein RAD51 homolog 2 isoform X1 [Cucumis sativus][more]
gi|659127776|ref|XP_008463884.1|1.1e-0674.42PREDICTED: DNA repair protein RAD51 homolog 2 isoform X2 [Cucumis melo][more]
gi|659127772|ref|XP_008463881.1|1.1e-0674.42PREDICTED: DNA repair protein RAD51 homolog 2 isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000724 double-strand break repair via homologous recombination
cellular_component GO:0005575 cellular_component
cellular_component GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g08690.1Cp4.1LG05g08690.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g08690CmaCh02G008600Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g08690CsaV3_6G021820Cucumber (Chinese Long) v3cpecucB0924
Cp4.1LG05g08690Bhi10G000495Wax gourdcpewgoB0943
Cp4.1LG05g08690CsGy6G015960Cucumber (Gy14) v2cgybcpeB848
Cp4.1LG05g08690Carg20249Silver-seed gourdcarcpeB0429
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g08690Cp4.1LG16g05650Cucurbita pepo (Zucchini)cpecpeB308
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g08690Cucurbita pepo (Zucchini)cpecpeB401
Cp4.1LG05g08690Cucurbita pepo (Zucchini)cpecpeB402
Cp4.1LG05g08690Cucurbita pepo (Zucchini)cpecpeB458
Cp4.1LG05g08690Cucumber (Gy14) v1cgycpeB0460
Cp4.1LG05g08690Cucurbita maxima (Rimu)cmacpeB500
Cp4.1LG05g08690Cucurbita maxima (Rimu)cmacpeB584
Cp4.1LG05g08690Cucurbita maxima (Rimu)cmacpeB751
Cp4.1LG05g08690Cucurbita maxima (Rimu)cmacpeB752
Cp4.1LG05g08690Cucurbita moschata (Rifu)cmocpeB459
Cp4.1LG05g08690Cucurbita moschata (Rifu)cmocpeB533
Cp4.1LG05g08690Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g08690Cucurbita moschata (Rifu)cmocpeB705
Cp4.1LG05g08690Cucurbita moschata (Rifu)cmocpeB706
Cp4.1LG05g08690Wild cucumber (PI 183967)cpecpiB727
Cp4.1LG05g08690Wild cucumber (PI 183967)cpecpiB747
Cp4.1LG05g08690Cucumber (Chinese Long) v2cpecuB726
Cp4.1LG05g08690Cucumber (Chinese Long) v2cpecuB734
Cp4.1LG05g08690Cucumber (Chinese Long) v2cpecuB745
Cp4.1LG05g08690Bottle gourd (USVL1VR-Ls)cpelsiB615
Cp4.1LG05g08690Bottle gourd (USVL1VR-Ls)cpelsiB588
Cp4.1LG05g08690Bottle gourd (USVL1VR-Ls)cpelsiB614
Cp4.1LG05g08690Watermelon (Charleston Gray)cpewcgB632
Cp4.1LG05g08690Watermelon (Charleston Gray)cpewcgB658
Cp4.1LG05g08690Watermelon (97103) v1cpewmB690
Cp4.1LG05g08690Watermelon (97103) v1cpewmB744
Cp4.1LG05g08690Melon (DHL92) v3.5.1cpemeB654
Cp4.1LG05g08690Melon (DHL92) v3.5.1cpemeB668
Cp4.1LG05g08690Melon (DHL92) v3.5.1cpemeB688
Cp4.1LG05g08690Cucumber (Gy14) v2cgybcpeB138
Cp4.1LG05g08690Cucumber (Gy14) v2cgybcpeB434
Cp4.1LG05g08690Cucumber (Gy14) v2cgybcpeB560
Cp4.1LG05g08690Melon (DHL92) v3.6.1cpemedB798
Cp4.1LG05g08690Melon (DHL92) v3.6.1cpemedB820
Cp4.1LG05g08690Silver-seed gourdcarcpeB0475
Cp4.1LG05g08690Silver-seed gourdcarcpeB0624
Cp4.1LG05g08690Cucumber (Chinese Long) v3cpecucB0907
Cp4.1LG05g08690Wax gourdcpewgoB0907